AT1G72030

Acetyltransferase (GNAT) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0012375
Physical Location & Seq
Forward (+)
27110832 .. 27111932
1101 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G72030.1

Sequence Viewer

Length: 771 bp
ATGGGTCACTTGCCACAGAGCCTCTACTCCGCCGCTGGACCAAAGTTTCCATATCCTGGAAGCTCCGGTCTAGGAGTAGATCAACGGAAGCTGACGTGGAGCCGCTTCCCGGTGTTCCTACGGTGCGCGTCGACGGAGTCGTTAACGAGTTTGACTCAGAATAATGCGGCGGAGATAGAGTTGAAGTATCTGGTGAGTCAACACGGGTGGGACGTGAGGAGATTGAATAGAGACGACGAGGATGAGATCAGGAGAGTGTCTCTTGTTCAAGCCGAAGCTTTCCACATCCCTCTTGCTCTTTTTGATGATTTTTTCTTCATGTTTTTTCAGGCAGAGGTTCTATCAGCACTTCTTTACAAACTAAAGAATTCACCACCTGACAGATATGCATGTCTCGTGGCGGAGCAAACAAGTGAAACTGAAACTTTGTCGAGCTCAAGTGTTGTCGGAGTAGTTGATGTAACAGCTCAAACTGAAAGTTCAGTACTTCGCTATTTTCCGGGCGTCGAAGAATATCTATACGTCTCGGGTTTAGCTGTCTCAAAATCTCAAAGGAGAAAGAAGATGGCAAGTACATTGTTAAAGGCATGTGATGTTTTGTGTTACTTGTGGGGTTTCAAGCTTCTTGCTCTAAGAGCTTATGAAGACGATGCAGCTGCTAGAAATCTTTACTCGAATGCCGGCTACAGTGTGGTCGAGACTGACCCGTTGTGGACCTCTACTTGGATAGGCAGAAAACGTCGCGTTCTTATGAGTAAACGCTTTTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_1

Protein Analysis

256

Amino Acids

28.92

Weight (kDa)

8.27

Isoelectric Point (pI)

55.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acetyltransf_1 PF00583 125 - 229 1e-06 Acetyltransferase (GNAT) family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 56
AccI GTMKAC 1 cut(s) 131
AccII CGCG 2 cut(s) 128, 744
AciI CCGC 6 cut(s) 30, 33, 103, 167, 170, 401
AcsI RAATTY 1 cut(s) 367
AcyI GRCGYC 1 cut(s) 504
AfaI GTAC 2 cut(s) 486, 574
AfiI CCNNNNNNNGG 3 cut(s) 56, 109, 723
AgsI TTSAA 4 cut(s) 184, 226, 269, 619
AjiI CACGTC 2 cut(s) 96, 214
AjnI CCWGG 1 cut(s) 55
AluBI AGCT 9 cut(s) 63, 91, 278, 435, 467, 536, 622, 638, 656
AluI AGCT 9 cut(s) 63, 91, 278, 435, 467, 536, 622, 638, 656
Alw21I GWGCWC 1 cut(s) 437
Alw26I GTCTC 6 cut(s) 225, 264, 398, 529, 544, 692
Ama87I CYCGRG 1 cut(s) 526
ApeKI GCWGC 2 cut(s) 653, 656
ApoI RAATTY 1 cut(s) 367
AspLEI GCGC 1 cut(s) 128
AspS9I GGNCC 2 cut(s) 38, 714
AsuC2I CCSGG 2 cut(s) 110, 501
AsuHPI GGTGA 2 cut(s) 205, 363
AvaI CYCGRG 1 cut(s) 526
AvaII GGWCC 2 cut(s) 38, 714
BanII GRGCYC 1 cut(s) 437
BauI CACGAG 1 cut(s) 395
BbsI GAAGAC 1 cut(s) 651
Bbv12I GWGCWC 1 cut(s) 437
BbvI GCAGC 2 cut(s) 643, 665
BccI CCATC 1 cut(s) 559
BcgI CGANNNNNNTGC 2 cut(s) 638, 672
BciT130I CCWGG 1 cut(s) 57
BcnI CCSGG 2 cut(s) 110, 501
BcoDI GTCTC 6 cut(s) 225, 264, 398, 529, 544, 692
BfaI CTAG 2 cut(s) 71, 660
BfmI CTRYAG 1 cut(s) 685
BisI GCNGC 5 cut(s) 33, 103, 168, 654, 657
BlsI GCNGC 5 cut(s) 34, 104, 169, 655, 658
BmcAI AGTACT 1 cut(s) 486
Bme1390I CCNGG 3 cut(s) 57, 110, 501
Bme18I GGWCC 2 cut(s) 38, 714
BmeT110I CYCGRG 1 cut(s) 526
BmgBI CACGTC 2 cut(s) 96, 214
BmgT120I GGNCC 2 cut(s) 38, 714
BmiI GGNNCC 1 cut(s) 101
BmrFI CCNGG 3 cut(s) 57, 110, 501
BmsI GCATC 1 cut(s) 640
BpiI GAAGAC 1 cut(s) 651
BplI GAGNNNNNCTC 4 cut(s) 139, 171, 244, 276
BpuEI CTTGAG 1 cut(s) 421
BpuMI CCSGG 2 cut(s) 110, 501
BsaHI GRCGYC 1 cut(s) 504
BsaWI WCCGGW 1 cut(s) 65
BsaXI ACNNNNNCTCC 2 cut(s) 164, 194
Bsc4I CCNNNNNNNGG 3 cut(s) 56, 109, 723
Bse118I RCCGGY 1 cut(s) 680
BseBI CCWGG 1 cut(s) 57
BseGI GGATG 2 cut(s) 247, 285
BseLI CCNNNNNNNGG 3 cut(s) 56, 109, 723
BseMII CTCAG 1 cut(s) 170
BseRI GAGGAG 1 cut(s) 232
BseXI GCAGC 2 cut(s) 643, 665
Bsh1236I CGCG 2 cut(s) 128, 744
BsiHKAI GWGCWC 1 cut(s) 437
BsiHKCI CYCGRG 1 cut(s) 526
BsiSI CCGG 4 cut(s) 66, 110, 500, 681
BslFI GGGAC 1 cut(s) 224
BslI CCNNNNNNNGG 3 cut(s) 56, 109, 723
BsmAI GTCTC 6 cut(s) 225, 264, 398, 529, 544, 692
BsmBI CGTCTC 2 cut(s) 225, 529
BsmFI GGGAC 1 cut(s) 224
BsmI GAATGC 1 cut(s) 682
BsoBI CYCGRG 1 cut(s) 526
Bsp1286I GDGCHC 1 cut(s) 437
Bsp143I GATC 2 cut(s) 79, 246
BspACI CCGC 6 cut(s) 30, 33, 103, 167, 170, 401
BspCNI CTCAG 1 cut(s) 169
BspFNI CGCG 2 cut(s) 128, 744
BspLI GGNNCC 1 cut(s) 101
BsrFI RCCGGY 1 cut(s) 680
BssAI RCCGGY 1 cut(s) 680
BssMI GATC 2 cut(s) 79, 246
BssNI GRCGYC 1 cut(s) 504
BssSI CACGAG 1 cut(s) 395
Bst2BI CACGAG 1 cut(s) 395
Bst2UI CCWGG 1 cut(s) 57
Bst4CI ACNGT 2 cut(s) 123, 689
BstACI GRCGYC 1 cut(s) 504
BstC8I GCNNGC 1 cut(s) 682
BstDEI CTNAG 3 cut(s) 156, 632, 768
BstF5I GGATG 2 cut(s) 247, 285
BstFNI CGCG 2 cut(s) 128, 744
BstHHI GCGC 1 cut(s) 128
BstKTI GATC 2 cut(s) 82, 249
BstMAI GTCTC 6 cut(s) 225, 264, 398, 529, 544, 692
BstMBI GATC 2 cut(s) 79, 246
BstMWI GCNNNNNNNGC 1 cut(s) 635
BstNI CCWGG 1 cut(s) 57
BstNSI RCATGY 2 cut(s) 393, 591
BstSCI CCNGG 3 cut(s) 55, 108, 499
BstSFI CTRYAG 1 cut(s) 685
BstUI CGCG 2 cut(s) 128, 744
BstV1I GCAGC 2 cut(s) 643, 665
BstV2I GAAGAC 1 cut(s) 651
BtrI CACGTC 2 cut(s) 96, 214
BtsCI GGATG 2 cut(s) 247, 285
BtsIMutI CAGTG 1 cut(s) 694
Cac8I GCNNGC 1 cut(s) 682
CfoI GCGC 1 cut(s) 128
Cfr10I RCCGGY 1 cut(s) 680
Cfr13I GGNCC 2 cut(s) 38, 714
CseI GACGC 2 cut(s) 117, 493
Csp6I GTAC 2 cut(s) 485, 573
CspCI CAANNNNNGTGG 2 cut(s) 188, 223
CviAII CATG 3 cut(s) 319, 390, 588
CviQI GTAC 2 cut(s) 485, 573
DdeI CTNAG 3 cut(s) 156, 632, 768
DpnI GATC 2 cut(s) 81, 248
DpnII GATC 2 cut(s) 79, 246
EciI GGCGGA 3 cut(s) 19, 185, 416
Ecl136II GAGCTC 1 cut(s) 435
Eco24I GRGCYC 1 cut(s) 437
Eco47I GGWCC 2 cut(s) 38, 714
Eco53kI GAGCTC 1 cut(s) 435
Eco88I CYCGRG 1 cut(s) 526
EcoICRI GAGCTC 1 cut(s) 435
EcoRI GAATTC 1 cut(s) 367
EcoRII CCWGG 1 cut(s) 55
EcoT22I ATGCAT 1 cut(s) 391
EcoT38I GRGCYC 1 cut(s) 437
Esp3I CGTCTC 2 cut(s) 225, 529
FaeI CATG 3 cut(s) 322, 393, 591
FaiI YATR 8 cut(s) 52, 320, 387, 391, 520, 589, 642, 752
FaqI GGGAC 1 cut(s) 224
FatI CATG 3 cut(s) 318, 389, 587
FblI GTMKAC 1 cut(s) 131
Fnu4HI GCNGC 5 cut(s) 33, 103, 168, 654, 657
FokI GGATG 2 cut(s) 254, 272
FriOI GRGCYC 1 cut(s) 437
Fsp4HI GCNGC 5 cut(s) 33, 103, 168, 654, 657
FspBI CTAG 2 cut(s) 71, 660
GlaI GCGC 1 cut(s) 127
GluI GCNGC 5 cut(s) 33, 103, 168, 654, 657
HapII CCGG 4 cut(s) 66, 110, 500, 681
HgaI GACGC 2 cut(s) 117, 493
HhaI GCGC 1 cut(s) 128
Hin1I GRCGYC 1 cut(s) 504
Hin1II CATG 3 cut(s) 322, 393, 591
Hin6I GCGC 1 cut(s) 126
HinP1I GCGC 1 cut(s) 126
HincII GTYRAC 3 cut(s) 132, 144, 200
HindII GTYRAC 3 cut(s) 132, 144, 200
HindIII AAGCTT 2 cut(s) 276, 620
HinfI GANTC 3 cut(s) 137, 154, 196
HpaI GTTAAC 1 cut(s) 144
HpaII CCGG 4 cut(s) 66, 110, 500, 681
HphI GGTGA 2 cut(s) 205, 363
Hpy166II GTNNAC 5 cut(s) 132, 144, 200, 714, 758
Hpy188I TCNGA 2 cut(s) 159, 449
Hpy188III TCNNGA 2 cut(s) 250, 697
Hpy8I GTNNAC 5 cut(s) 132, 144, 200, 714, 758
Hpy99I CGWCG 5 cut(s) 133, 136, 239, 509, 744
HpyCH4III ACNGT 2 cut(s) 123, 689
HpyCH4IV ACGT 4 cut(s) 95, 213, 522, 739
HpyCH4V TGCA 2 cut(s) 389, 653
HpyF10VI GCNNNNNNNGC 1 cut(s) 635
HpyF3I CTNAG 3 cut(s) 156, 632, 768
HpySE526I ACGT 4 cut(s) 95, 213, 522, 739
Hsp92I GRCGYC 1 cut(s) 504
Hsp92II CATG 3 cut(s) 322, 393, 591
HspAI GCGC 1 cut(s) 126
KroI GCCGGC 1 cut(s) 680
KroNI GCCGGC 1 cut(s) 682
KspAI GTTAAC 1 cut(s) 144
Kzo9I GATC 2 cut(s) 79, 246
LmnI GCTCC 3 cut(s) 68, 99, 403
Lsp1109I GCAGC 2 cut(s) 643, 665
LweI GCATC 1 cut(s) 640
MaeI CTAG 2 cut(s) 71, 660
MaeII ACGT 4 cut(s) 95, 213, 522, 739
MaeIII GTNAC 3 cut(s) 5, 460, 602
MalI GATC 2 cut(s) 81, 248
MboI GATC 2 cut(s) 79, 246
MboII GAAGA 4 cut(s) 307, 521, 574, 656
MhlI GDGCHC 1 cut(s) 437
MluCI AATT 1 cut(s) 367
MlyI GAGTC 3 cut(s) 146, 148, 205
MmeI TCCRAC 1 cut(s) 427
MnlI CCTC 6 cut(s) 32, 210, 232, 300, 328, 727
Mph1103I ATGCAT 1 cut(s) 391
MroNI GCCGGC 1 cut(s) 680
MseI TTAA 2 cut(s) 143, 581
MspA1I CMGCKG 2 cut(s) 35, 656
MspI CCGG 4 cut(s) 66, 110, 500, 681
MspR9I CCNGG 3 cut(s) 57, 110, 501
Mva1269I GAATGC 1 cut(s) 682
MvaI CCWGG 1 cut(s) 57
MvnI CGCG 2 cut(s) 128, 744
MwoI GCNNNNNNNGC 1 cut(s) 635
NaeI GCCGGC 1 cut(s) 682
NciI CCSGG 2 cut(s) 110, 501
NdeII GATC 2 cut(s) 79, 246
NgoMIV GCCGGC 1 cut(s) 680
NlaIII CATG 3 cut(s) 322, 393, 591
NlaIV GGNNCC 1 cut(s) 101
NmuCI GTSAC 1 cut(s) 5
NsiI ATGCAT 1 cut(s) 391
NspI RCATGY 2 cut(s) 393, 591
PcsI WCGNNNNNNNCGW 2 cut(s) 137, 210
PctI GAATGC 1 cut(s) 682
PdiI GCCGGC 1 cut(s) 682
PflFI GACNNNGTC 1 cut(s) 136
PflMI CCANNNNNTGG 1 cut(s) 56
PfoI TCCNGGA 1 cut(s) 55
PkrI GCNGC 5 cut(s) 34, 104, 169, 655, 658
PleI GAGTC 3 cut(s) 145, 148, 204
PpsI GAGTC 3 cut(s) 145, 148, 204
Psp124BI GAGCTC 1 cut(s) 437
Psp6I CCWGG 1 cut(s) 55
PspGI CCWGG 1 cut(s) 55
PspN4I GGNNCC 1 cut(s) 101
PspPI GGNCC 2 cut(s) 38, 714
PsyI GACNNNGTC 1 cut(s) 136
PvuII CAGCTG 1 cut(s) 656
RsaI GTAC 2 cut(s) 486, 574
RsaNI GTAC 2 cut(s) 485, 573
SacI GAGCTC 1 cut(s) 437
SalI GTCGAC 1 cut(s) 130
SaqAI TTAA 2 cut(s) 143, 581
SatI GCNGC 5 cut(s) 33, 103, 168, 654, 657
Sau3AI GATC 2 cut(s) 79, 246
Sau96I GGNCC 2 cut(s) 38, 714
ScaI AGTACT 1 cut(s) 486
SchI GAGTC 3 cut(s) 146, 148, 205
ScrFI CCNGG 3 cut(s) 57, 110, 501
SduI GDGCHC 1 cut(s) 437
SfaNI GCATC 1 cut(s) 640
SfcI CTRYAG 1 cut(s) 685
SgrDI CGTCGACG 1 cut(s) 130
SinI GGWCC 2 cut(s) 38, 714
SmlI CTYRAG 1 cut(s) 436
SmoI CTYRAG 1 cut(s) 436
Sse9I AATT 1 cut(s) 367
SsiI CCGC 6 cut(s) 30, 33, 103, 167, 170, 401
SspMI CTAG 2 cut(s) 71, 660
SstI GAGCTC 1 cut(s) 437
StyD4I CCNGG 3 cut(s) 55, 108, 499
TaaI ACNGT 2 cut(s) 123, 689
TaiI ACGT 4 cut(s) 98, 216, 525, 742
TaqI TCGA 5 cut(s) 131, 431, 507, 674, 696
TasI AATT 1 cut(s) 367
TatI WGTACW 2 cut(s) 484, 572
TauI GCSGC 3 cut(s) 35, 105, 170
Tru1I TTAA 2 cut(s) 143, 581
Tru9I TTAA 2 cut(s) 143, 581
TscAI CASTG 1 cut(s) 694
TseFI GTSAC 1 cut(s) 5
TseI GCWGC 2 cut(s) 653, 656
Tsp45I GTSAC 1 cut(s) 5
TspDTI ATGAA 2 cut(s) 307, 657
TspGWI ACGGA 2 cut(s) 100, 149
TspRI CASTG 1 cut(s) 694
Tth111I GACNNNGTC 1 cut(s) 136
Van91I CCANNNNNTGG 1 cut(s) 56
VpaK11BI GGWCC 2 cut(s) 38, 714
XapI RAATTY 1 cut(s) 367
XceI RCATGY 2 cut(s) 393, 591
XmiI GTMKAC 1 cut(s) 131
XspI CTAG 2 cut(s) 71, 660
ZrmI AGTACT 1 cut(s) 486
Zsp2I ATGCAT 1 cut(s) 391
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.