Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0012375

Physical Location & Seq

Genomic Coordinates Reverse (-)

29422041 .. 29423446

Gene Structure 1406 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G311100.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 861 bp

ATGGCTCATTTGATAGCAGCGGGCTACCCCAACATATCAGGAAAACTCTGCGCAGAGATTTCATGTGGATTTACTGCTACTCTTTCTAGACCAGCAAGGAGGACTAAATTGAAAATGATTCATTTTGAGGGGCAGTTTGAGAGATCAGAAAGTAAGGCTAGTTGTTGTGTGGTGCATTGCTGCAGTACCAGTTCATCAAGCTCATCAGCTGCTGAGGAAGTTGGGTTTGTGGGGAGTGGGAAATTTGGTATTGATGGAAAGGGAGAGTTTAAGTATTTGGTGAGTGAGTTTGGTTGGAAGGTGAGGAGTTTGTTTAGGAATGGAGATGAGGTGAGAAGGGCAGCTCAAGTTCAAGCTGAAGCATTCCATGAGCCTGTGTTTCTCTTCAATGATCTCTTCTTCCAATTCTTCCAGGCTGAAGTGCTTTCTGGGCTTGTATATAAACTTAGGAACTCACCTCCGAATAGGTATGCCTGTTTGGTTGCTGAGCCTACACTTGACAATTCCAACACACAAGAAGACCTTGTGGGCGTAGTGGATGTTACAGTGTCGAGAGACCGGGATGTGCTTCAGCATCTGCCGTCGGAGGCAGAGGAATATCTTTACGTGTCTGGGATAGCTGTTTTGAAGAGTTTCAGGAGGAAGAAAGTAGGGAGTGTTCTGCTAAAGGGGTGTGATATGCTCTCAGTTGAATGGGGTTTCGAGTATCTTGCTCTCCGGGCTTATGAGGATGATTTGGGTGCTCGCCAATTGTACTCCAGTGCAGGCTACCGAGTTGTCTCAGGTGATCCCCCATGGCTGTCTACTTGGTTTGGAAGAAAACGCCGCGTTCTCATGATCAAACACTCTAAACTAACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_1

Protein Analysis

287

Amino Acids

31.93

Weight (kDa)

8.56

Isoelectric Point (pI)

42.99

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012375)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G72030
fragaria_vesca	FvH4_7g31720 FvH4_7g31720
malus_domestica	MD01G1220200.v1.1
prunus_persica	Prupe.2G311100_v2.0.a1 Prupe.2G311100_v2.0.a1 Prupe.2G311100_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0380911
rosa_laevigata	RLG00000026263
rosa_multiflora	Rmu_co8437397.1_g000001 Rmu_sc0002962.1_g000021 Rmu_sc0004623.1_g000008
rosa_roxburghii	Rroxscaffold_4G00278970
rosa_rugosa	Rorug01G0425400 Rorug01G0425500
rosa_samantha	Rh1AG449200 Rh1BG404900 Rh1CG418900 Rh1DG435300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	52
AccI	GTMKAC	1 cut(s)	803
AccII	CGCG	1 cut(s)	828
AciI	CCGC	2 cut(s)	20, 826
AclWI	GGATC	1 cut(s)	782
AcsI	RAATTY	1 cut(s)	242
AcuI	CTGAAG	3 cut(s)	378, 438, 554
AfaI	GTAC	2 cut(s)	187, 755
AflIII	ACRYGT	1 cut(s)	606
AgsI	TTSAA	5 cut(s)	112, 353, 388, 628, 692
AjnI	CCWGG	1 cut(s)	411
AluBI	AGCT	5 cut(s)	201, 209, 344, 356, 620
AluI	AGCT	5 cut(s)	201, 209, 344, 356, 620
Alw21I	GWGCWC	1 cut(s)	745
Alw26I	GTCTC	2 cut(s)	549, 784
AlwI	GGATC	1 cut(s)	782
AlwNI	CAGNNNCTG	2 cut(s)	212, 577
ApeKI	GCWGC	4 cut(s)	17, 180, 209, 341
ApoI	RAATTY	1 cut(s)	242
Asp700I	GAANNNNTTC	1 cut(s)	632
AspLEI	GCGC	1 cut(s)	53
AsuC2I	CCSGG	2 cut(s)	560, 719
AsuHPI	GGTGA	5 cut(s)	292, 313, 343, 447, 797
BbsI	GAAGAC	1 cut(s)	525
Bbv12I	GWGCWC	1 cut(s)	745
BbvCI	CCTCAGC	1 cut(s)	213
BbvI	GCAGC	4 cut(s)	29, 167, 196, 353
BccI	CCATC	1 cut(s)	248
BceAI	ACGGC	1 cut(s)	565
BcgI	CGANNNNNNTGC	2 cut(s)	692, 726
BciT130I	CCWGG	1 cut(s)	413
BclI	TGATCA	1 cut(s)	837
BcnI	CCSGG	2 cut(s)	560, 719
BcoDI	GTCTC	2 cut(s)	549, 784
BfaI	CTAG	2 cut(s)	87, 159
BfmI	CTRYAG	1 cut(s)	181
BisI	GCNGC	5 cut(s)	18, 181, 210, 342, 826
BlpI	GCTNAGC	1 cut(s)	486
BlsI	GCNGC	5 cut(s)	19, 182, 211, 343, 827
Bme1390I	CCNGG	3 cut(s)	413, 560, 719
BmrFI	CCNGG	3 cut(s)	413, 560, 719
BmsI	GCATC	1 cut(s)	583
BpiI	GAAGAC	1 cut(s)	525
BpmI	CTGGAG	1 cut(s)	742
Bpu10I	CCTNAGC	1 cut(s)	213
Bpu1102I	GCTNAGC	1 cut(s)	486
BpuEI	CTTGAG	1 cut(s)	330
BpuMI	CCSGG	2 cut(s)	560, 719
BsaAI	YACGTR	1 cut(s)	607
BsaI	GGTCTC	1 cut(s)	549
BsaJI	CCNNGG	1 cut(s)	794
BsaXI	ACNNNNNCTCC	2 cut(s)	315, 345
Bse1I	ACTGG	2 cut(s)	189, 759
Bse3DI	GCAATG	1 cut(s)	175
BseBI	CCWGG	1 cut(s)	413
BseDI	CCNNGG	1 cut(s)	794
BseGI	GGATG	3 cut(s)	544, 568, 736
BseMI	GCAATG	1 cut(s)	175
BseMII	CTCAG	4 cut(s)	204, 477, 699, 795
BseNI	ACTGG	2 cut(s)	189, 759
BseRI	GAGGAG	1 cut(s)	319
BseXI	GCAGC	4 cut(s)	29, 167, 196, 353
BsgI	GTGCAG	1 cut(s)	783
Bsh1236I	CGCG	1 cut(s)	828
BsiHKAI	GWGCWC	1 cut(s)	745
BsiSI	CCGG	2 cut(s)	559, 718
BsmAI	GTCTC	2 cut(s)	549, 784
BsmI	GAATGC	1 cut(s)	362
Bso31I	GGTCTC	1 cut(s)	549
Bsp1286I	GDGCHC	1 cut(s)	745
Bsp143I	GATC	4 cut(s)	143, 391, 787, 837
Bsp1720I	GCTNAGC	1 cut(s)	486
Bsp19I	CCATGG	1 cut(s)	794
BspACI	CCGC	2 cut(s)	20, 826
BspCNI	CTCAG	4 cut(s)	205, 478, 698, 794
BspFNI	CGCG	1 cut(s)	828
BspHI	TCATGA	1 cut(s)	834
BspMAI	CTGCAG	1 cut(s)	185
BspPI	GGATC	1 cut(s)	782
BspTNI	GGTCTC	1 cut(s)	549
BsrDI	GCAATG	1 cut(s)	175
BsrI	ACTGG	2 cut(s)	189, 759
BssECI	CCNNGG	1 cut(s)	794
BssMI	GATC	4 cut(s)	143, 391, 787, 837
BssT1I	CCWWGG	1 cut(s)	794
Bst2UI	CCWGG	1 cut(s)	413
Bst4CI	ACNGT	1 cut(s)	547
Bst6I	CTCTTC	3 cut(s)	389, 401, 623
BstBAI	YACGTR	1 cut(s)	607
BstC8I	GCNNGC	3 cut(s)	22, 745, 766
BstDEI	CTNAG	5 cut(s)	213, 446, 486, 685, 781
BstDSI	CCRYGG	1 cut(s)	794
BstF5I	GGATG	3 cut(s)	544, 568, 736
BstFNI	CGCG	1 cut(s)	828
BstHHI	GCGC	1 cut(s)	53
BstKTI	GATC	4 cut(s)	146, 394, 790, 840
BstMAI	GTCTC	2 cut(s)	549, 784
BstMBI	GATC	4 cut(s)	143, 391, 787, 837
BstMWI	GCNNNNNNNGC	2 cut(s)	430, 719
BstNI	CCWGG	1 cut(s)	413
BstSCI	CCNGG	3 cut(s)	411, 558, 717
BstSFI	CTRYAG	1 cut(s)	181
BstUI	CGCG	1 cut(s)	828
BstV1I	GCAGC	4 cut(s)	29, 167, 196, 353
BstV2I	GAAGAC	1 cut(s)	525
BtgI	CCRYGG	1 cut(s)	794
BtsCI	GGATG	3 cut(s)	544, 568, 736
BtsIMutI	CAGTG	2 cut(s)	552, 766
Cac8I	GCNNGC	3 cut(s)	22, 745, 766
CaiI	CAGNNNCTG	2 cut(s)	212, 577
CciI	TCATGA	1 cut(s)	834
CfoI	GCGC	1 cut(s)	53
Csp6I	GTAC	2 cut(s)	186, 754
CviAII	CATG	4 cut(s)	63, 368, 795, 835
CviQI	GTAC	2 cut(s)	186, 754
DdeI	CTNAG	5 cut(s)	213, 446, 486, 685, 781
DpnI	GATC	4 cut(s)	145, 393, 789, 839
DpnII	GATC	4 cut(s)	143, 391, 787, 837
Eam1104I	CTCTTC	3 cut(s)	389, 401, 623
EarI	CTCTTC	3 cut(s)	389, 401, 623
Eco130I	CCWWGG	1 cut(s)	794
Eco31I	GGTCTC	1 cut(s)	549
Eco57I	CTGAAG	3 cut(s)	378, 438, 554
EcoRII	CCWGG	1 cut(s)	411
EcoT14I	CCWWGG	1 cut(s)	794
ErhI	CCWWGG	1 cut(s)	794
FaeI	CATG	4 cut(s)	66, 371, 798, 838
FalI	AAGNNNNNCTT	2 cut(s)	507, 539
FatI	CATG	4 cut(s)	62, 367, 794, 834
FauI	CCCGC	1 cut(s)	13
FbaI	TGATCA	1 cut(s)	837
FblI	GTMKAC	1 cut(s)	803
Fnu4HI	GCNGC	5 cut(s)	18, 181, 210, 342, 826
FokI	GGATG	3 cut(s)	551, 575, 743
Fsp4HI	GCNGC	5 cut(s)	18, 181, 210, 342, 826
FspBI	CTAG	2 cut(s)	87, 159
FspI	TGCGCA	1 cut(s)	52
GlaI	GCGC	1 cut(s)	52
GluI	GCNGC	5 cut(s)	18, 181, 210, 342, 826
GsuI	CTGGAG	1 cut(s)	742
HapII	CCGG	2 cut(s)	559, 718
HhaI	GCGC	1 cut(s)	53
Hin1II	CATG	4 cut(s)	66, 371, 798, 838
Hin6I	GCGC	1 cut(s)	51
HinP1I	GCGC	1 cut(s)	51
HinfI	GANTC	1 cut(s)	118
HpaII	CCGG	2 cut(s)	559, 718
HphI	GGTGA	5 cut(s)	292, 313, 343, 447, 797
Hpy166II	GTNNAC	1 cut(s)	804
Hpy188I	TCNGA	3 cut(s)	148, 462, 586
Hpy188III	TCNNGA	5 cut(s)	39, 87, 552, 637, 835
Hpy8I	GTNNAC	1 cut(s)	804
Hpy99I	CGWCG	1 cut(s)	586
HpyAV	CCTTC	2 cut(s)	292, 330
HpyCH4III	ACNGT	1 cut(s)	547
HpyCH4IV	ACGT	1 cut(s)	606
HpyCH4V	TGCA	3 cut(s)	175, 183, 764
HpyF10VI	GCNNNNNNNGC	2 cut(s)	430, 719
HpyF3I	CTNAG	5 cut(s)	213, 446, 486, 685, 781
HpySE526I	ACGT	1 cut(s)	606
Hsp92II	CATG	4 cut(s)	66, 371, 798, 838
HspAI	GCGC	1 cut(s)	51
Ksp22I	TGATCA	1 cut(s)	837
Kzo9I	GATC	4 cut(s)	143, 391, 787, 837
Lsp1109I	GCAGC	4 cut(s)	29, 167, 196, 353
LweI	GCATC	1 cut(s)	583
MaeI	CTAG	2 cut(s)	87, 159
MaeII	ACGT	1 cut(s)	606
MaeIII	GTNAC	1 cut(s)	541
MalI	GATC	4 cut(s)	145, 393, 789, 839
MboI	GATC	4 cut(s)	143, 391, 787, 837
MboII	GAAGA	8 cut(s)	376, 388, 391, 400, 530, 640, 655, 828
MfeI	CAATTG	1 cut(s)	749
MhlI	GDGCHC	1 cut(s)	745
MluCI	AATT	5 cut(s)	107, 242, 404, 502, 749
MmeI	TCCRAC	3 cut(s)	275, 531, 564
MroXI	GAANNNNTTC	1 cut(s)	632
MseI	TTAA	2 cut(s)	270, 859
MspA1I	CMGCKG	2 cut(s)	20, 209
MspI	CCGG	2 cut(s)	559, 718
MspR9I	CCNGG	3 cut(s)	413, 560, 719
MunI	CAATTG	1 cut(s)	749
Mva1269I	GAATGC	1 cut(s)	362
MvaI	CCWGG	1 cut(s)	413
MvnI	CGCG	1 cut(s)	828
MwoI	GCNNNNNNNGC	2 cut(s)	430, 719
NciI	CCSGG	2 cut(s)	560, 719
NcoI	CCATGG	1 cut(s)	794
NdeII	GATC	4 cut(s)	143, 391, 787, 837
NlaIII	CATG	4 cut(s)	66, 371, 798, 838
NsbI	TGCGCA	1 cut(s)	52
PagI	TCATGA	1 cut(s)	834
PctI	GAATGC	1 cut(s)	362
PdmI	GAANNNNTTC	1 cut(s)	632
PfeI	GAWTC	1 cut(s)	118
PkrI	GCNGC	5 cut(s)	19, 182, 211, 343, 827
Ppu21I	YACGTR	1 cut(s)	607
Psp6I	CCWGG	1 cut(s)	411
PspGI	CCWGG	1 cut(s)	411
PsrI	GAACNNNNNNTAC	2 cut(s)	642, 674
PstI	CTGCAG	1 cut(s)	185
PstNI	CAGNNNCTG	2 cut(s)	212, 577
PvuII	CAGCTG	1 cut(s)	209
RsaI	GTAC	2 cut(s)	187, 755
RsaNI	GTAC	2 cut(s)	186, 754
SaqAI	TTAA	2 cut(s)	270, 859
SatI	GCNGC	5 cut(s)	18, 181, 210, 342, 826
Sau3AI	GATC	4 cut(s)	143, 391, 787, 837
ScrFI	CCNGG	3 cut(s)	413, 560, 719
SduI	GDGCHC	1 cut(s)	745
SfaNI	GCATC	1 cut(s)	583
SfcI	CTRYAG	1 cut(s)	181
SmlI	CTYRAG	1 cut(s)	345
SmoI	CTYRAG	1 cut(s)	345
Sse9I	AATT	5 cut(s)	107, 242, 404, 502, 749
SsiI	CCGC	2 cut(s)	20, 826
SspMI	CTAG	2 cut(s)	87, 159
StyD4I	CCNGG	3 cut(s)	411, 558, 717
StyI	CCWWGG	1 cut(s)	794
TaaI	ACNGT	1 cut(s)	547
TaiI	ACGT	1 cut(s)	609
TaqI	TCGA	2 cut(s)	551, 702
TasI	AATT	5 cut(s)	107, 242, 404, 502, 749
TatI	WGTACW	1 cut(s)	753
TauI	GCSGC	1 cut(s)	828
TfiI	GAWTC	1 cut(s)	118
Tru1I	TTAA	2 cut(s)	270, 859
Tru9I	TTAA	2 cut(s)	270, 859
TscAI	CASTG	2 cut(s)	552, 766
TseI	GCWGC	4 cut(s)	17, 180, 209, 341
TspDTI	ATGAA	3 cut(s)	51, 110, 183
TspRI	CASTG	2 cut(s)	552, 766
XapI	RAATTY	1 cut(s)	242
XbaI	TCTAGA	1 cut(s)	86
XmiI	GTMKAC	1 cut(s)	803
XmnI	GAANNNNTTC	1 cut(s)	632
XspI	CTAG	2 cut(s)	87, 159

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.