RLG00000026263

Acetyltransferase (GNAT) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0012375
Physical Location & Seq
Forward (+)
1735034 .. 1736227
1194 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026263

Sequence Viewer

Length: 843 bp
ATGGTCAATTTGCTAGGAAGCTATCCCAACATATCAGAACTCTCATATGGATTAATTACAGTTTCTAGACCAGCTAGGAGGACTAGATTGATCAATGGTGAGGGACATATTGGGTATGTAGAGATTAAGACCACAAATTGTGTAGTGCATTGCTCCGGTAGTAGTAGTGGTAGCTCAAGTAGTAGTACCTCATCAACGGAGGAAGTGGGTTTTGTAGGGAGTGGAAAGTTTGGTATTGATAGTAAGGGACAGTTCAAGTACTTGGTGAGTGAGTATGGATGGAAGGTCAGGAGTTTGTTTAGAAATGGAGATGAGGTAAGGAAGGCAGCTCAAGTTCAAGCTGAAGCATTTCATGAACCTGTGTTTCTCTTCAATGATCTGTTCTTCCAATTCTTCCAGGCTGAAGTGTTATCTGGGCTTGTATATAAACTTAGGAACTCACCCCCAAACAGGTATGCTTGTTTAGTTGCTGAGCCTACGCCCATGGACACTTCCGAGTCACAAGAACTCGTGGGCGTCGTGGATCTCACGGCGTCAAGAGACCAGAATGTACTAGAGCATCTCCCACCTGATGCAGATGAGTTTCTTTATGTGTCCGGCATAGCTGTTCTCAAGAGTTTTAGGAGGAAGAAAGTAGCCACTGTTTTACTAAAAGCTTGTGACATGCTCTCAGCTGAATGGGGATTTCAGTATCTTGCTCTCCGGGCTTATGAAGACGATTTTGGTGCCCGGGAGTTGTATGCAAATGCCGGTTACCGGGTTGTCTCAGGTGATCCACCGTGGATGAGTACTTGGATTGGAAGAAAACGCCGTGTTGTTATGATCAAACAGACTCTGACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_1

Protein Analysis

281

Amino Acids

31.17

Weight (kDa)

7.65

Isoelectric Point (pI)

41.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acetyltransf_1 PF00583 164 - 252 2.2e-08 Acetyltransferase (GNAT) family
Acetyltransf_7 PF13508 168 - 253 7.4e-06 Acetyltransferase (GNAT) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 725
AclWI GGATC 2 cut(s) 531, 767
AcuI CTGAAG 2 cut(s) 363, 423
AcyI GRCGYC 2 cut(s) 516, 533
AfaI GTAC 4 cut(s) 187, 260, 552, 790
AfiI CCNNNNNNNGG 2 cut(s) 450, 756
AgsI TTSAA 3 cut(s) 256, 338, 373
AjnI CCWGG 1 cut(s) 396
AjuI GAANNNNNNNTTGG 2 cut(s) 705, 737
AluBI AGCT 8 cut(s) 21, 74, 174, 329, 341, 605, 656, 674
AluI AGCT 8 cut(s) 21, 74, 174, 329, 341, 605, 656, 674
Alw26I GTCTC 2 cut(s) 534, 769
AlwI GGATC 2 cut(s) 531, 767
AlwNI CAGNNNCTG 1 cut(s) 835
Ama87I CYCGRG 1 cut(s) 729
ApeKI GCWGC 1 cut(s) 326
AseI ATTAAT 1 cut(s) 53
Asp700I GAANNNNTTC 1 cut(s) 348
AsuC2I CCSGG 4 cut(s) 704, 730, 731, 758
AsuHPI GGTGA 4 cut(s) 110, 277, 432, 782
AvaI CYCGRG 1 cut(s) 729
BaeGI GKGCMC 1 cut(s) 730
BanI GGYRCC 1 cut(s) 725
BauI CACGAG 1 cut(s) 509
BbsI GAAGAC 1 cut(s) 720
BbvI GCAGC 1 cut(s) 338
BccI CCATC 1 cut(s) 273
BceAI ACGGC 2 cut(s) 546, 795
BcgI CGANNNNNNTGC 2 cut(s) 707, 741
BciT130I CCWGG 1 cut(s) 398
BclI TGATCA 2 cut(s) 90, 822
BcnI CCSGG 4 cut(s) 704, 730, 731, 758
BcoDI GTCTC 2 cut(s) 534, 769
BfaI CTAG 5 cut(s) 14, 66, 75, 84, 554
BisI GCNGC 1 cut(s) 327
BlpI GCTNAGC 1 cut(s) 471
BlsI GCNGC 1 cut(s) 328
BmcAI AGTACT 2 cut(s) 260, 790
Bme1390I CCNGG 5 cut(s) 398, 704, 730, 731, 758
BmeT110I CYCGRG 1 cut(s) 729
BmiI GGNNCC 1 cut(s) 727
BmrFI CCNGG 5 cut(s) 398, 704, 730, 731, 758
BmsI GCATC 2 cut(s) 562, 568
BpiI GAAGAC 1 cut(s) 720
Bpu1102I GCTNAGC 1 cut(s) 471
BpuEI CTTGAG 3 cut(s) 160, 315, 596
BpuMI CCSGG 4 cut(s) 704, 730, 731, 758
BsaHI GRCGYC 2 cut(s) 516, 533
BsaI GGTCTC 1 cut(s) 534
BsaJI CCNNGG 3 cut(s) 483, 729, 779
BsaWI WCCGGW 1 cut(s) 155
BsaXI ACNNNNNCTCC 2 cut(s) 300, 330
Bsc4I CCNNNNNNNGG 2 cut(s) 450, 756
Bse118I RCCGGY 1 cut(s) 749
Bse3DI GCAATG 1 cut(s) 148
BseBI CCWGG 1 cut(s) 398
BseDI CCNNGG 3 cut(s) 483, 729, 779
BseGI GGATG 2 cut(s) 284, 789
BseLI CCNNNNNNNGG 2 cut(s) 450, 756
BseMI GCAATG 1 cut(s) 148
BseMII CTCAG 3 cut(s) 462, 684, 780
BseSI GKGCMC 1 cut(s) 730
BseXI GCAGC 1 cut(s) 338
BshNI GGYRCC 1 cut(s) 725
BsiHKCI CYCGRG 1 cut(s) 729
BsiSI CCGG 6 cut(s) 156, 597, 703, 730, 750, 757
BslFI GGGAC 2 cut(s) 117, 261
BslI CCNNNNNNNGG 2 cut(s) 450, 756
BsmAI GTCTC 2 cut(s) 534, 769
BsmFI GGGAC 2 cut(s) 117, 261
Bso31I GGTCTC 1 cut(s) 534
BsoBI CYCGRG 1 cut(s) 729
Bsp1286I GDGCHC 1 cut(s) 730
Bsp143I GATC 5 cut(s) 90, 376, 523, 772, 822
Bsp1720I GCTNAGC 1 cut(s) 471
Bsp19I CCATGG 1 cut(s) 483
BspCNI CTCAG 3 cut(s) 463, 683, 779
BspHI TCATGA 1 cut(s) 352
BspLI GGNNCC 1 cut(s) 727
BspPI GGATC 2 cut(s) 531, 767
BspT107I GGYRCC 1 cut(s) 725
BspTNI GGTCTC 1 cut(s) 534
BsrDI GCAATG 1 cut(s) 148
BsrFI RCCGGY 1 cut(s) 749
BssAI RCCGGY 1 cut(s) 749
BssECI CCNNGG 3 cut(s) 483, 729, 779
BssMI GATC 5 cut(s) 90, 376, 523, 772, 822
BssNI GRCGYC 2 cut(s) 516, 533
BssSI CACGAG 1 cut(s) 509
BssT1I CCWWGG 1 cut(s) 483
Bst2BI CACGAG 1 cut(s) 509
Bst2UI CCWGG 1 cut(s) 398
Bst4CI ACNGT 4 cut(s) 61, 252, 643, 780
Bst6I CTCTTC 1 cut(s) 374
BstACI GRCGYC 2 cut(s) 516, 533
BstDEI CTNAG 4 cut(s) 431, 471, 670, 766
BstDSI CCRYGG 2 cut(s) 483, 779
BstEII GGTNACC 1 cut(s) 752
BstF5I GGATG 2 cut(s) 284, 789
BstKTI GATC 5 cut(s) 93, 379, 526, 775, 825
BstMAI GTCTC 2 cut(s) 534, 769
BstMBI GATC 5 cut(s) 90, 376, 523, 772, 822
BstMWI GCNNNNNNNGC 1 cut(s) 704
BstNI CCWGG 1 cut(s) 398
BstNSI RCATGY 1 cut(s) 667
BstPI GGTNACC 1 cut(s) 752
BstSCI CCNGG 5 cut(s) 396, 702, 728, 729, 756
BstSLI GKGCMC 1 cut(s) 730
BstV1I GCAGC 1 cut(s) 338
BstV2I GAAGAC 1 cut(s) 720
BstX2I RGATCY 1 cut(s) 523
BstYI RGATCY 1 cut(s) 523
BtgI CCRYGG 2 cut(s) 483, 779
BtsCI GGATG 2 cut(s) 284, 789
BtsIMutI CAGTG 1 cut(s) 639
CaiI CAGNNNCTG 1 cut(s) 835
CciI TCATGA 1 cut(s) 352
Cfr10I RCCGGY 1 cut(s) 749
Cfr9I CCCGGG 1 cut(s) 729
CseI GACGC 2 cut(s) 505, 522
Csp6I GTAC 4 cut(s) 186, 259, 551, 789
CviAII CATG 3 cut(s) 353, 484, 664
CviQI GTAC 4 cut(s) 186, 259, 551, 789
DdeI CTNAG 4 cut(s) 431, 471, 670, 766
DpnI GATC 5 cut(s) 92, 378, 525, 774, 824
DpnII GATC 5 cut(s) 90, 376, 523, 772, 822
Eam1104I CTCTTC 1 cut(s) 374
EarI CTCTTC 1 cut(s) 374
Eco130I CCWWGG 1 cut(s) 483
Eco31I GGTCTC 1 cut(s) 534
Eco57I CTGAAG 2 cut(s) 363, 423
Eco88I CYCGRG 1 cut(s) 729
Eco91I GGTNACC 1 cut(s) 752
EcoO65I GGTNACC 1 cut(s) 752
EcoRII CCWGG 1 cut(s) 396
EcoT14I CCWWGG 1 cut(s) 483
ErhI CCWWGG 1 cut(s) 483
FaeI CATG 3 cut(s) 356, 487, 667
FaqI GGGAC 2 cut(s) 117, 261
FatI CATG 3 cut(s) 352, 483, 663
FauNDI CATATG 1 cut(s) 46
FbaI TGATCA 2 cut(s) 90, 822
Fnu4HI GCNGC 1 cut(s) 327
FokI GGATG 2 cut(s) 291, 796
Fsp4HI GCNGC 1 cut(s) 327
FspBI CTAG 5 cut(s) 14, 66, 75, 84, 554
GluI GCNGC 1 cut(s) 327
HapII CCGG 6 cut(s) 156, 597, 703, 730, 750, 757
HgaI GACGC 2 cut(s) 505, 522
Hin1I GRCGYC 2 cut(s) 516, 533
Hin1II CATG 3 cut(s) 356, 487, 667
HindIII AAGCTT 1 cut(s) 654
HinfI GANTC 2 cut(s) 497, 832
HpaII CCGG 6 cut(s) 156, 597, 703, 730, 750, 757
HphI GGTGA 4 cut(s) 110, 277, 432, 782
Hpy188I TCNGA 3 cut(s) 37, 496, 837
Hpy188III TCNNGA 5 cut(s) 66, 289, 353, 537, 613
Hpy99I CGWCG 1 cut(s) 521
HpyAV CCTTC 2 cut(s) 277, 316
HpyCH4III ACNGT 4 cut(s) 61, 252, 643, 780
HpyCH4V TGCA 3 cut(s) 148, 575, 743
HpyF10VI GCNNNNNNNGC 1 cut(s) 704
HpyF3I CTNAG 4 cut(s) 431, 471, 670, 766
Hsp92I GRCGYC 2 cut(s) 516, 533
Hsp92II CATG 3 cut(s) 356, 487, 667
Ksp22I TGATCA 2 cut(s) 90, 822
Kzo9I GATC 5 cut(s) 90, 376, 523, 772, 822
LmnI GCTCC 1 cut(s) 158
Lsp1109I GCAGC 1 cut(s) 338
LweI GCATC 2 cut(s) 562, 568
MaeI CTAG 5 cut(s) 14, 66, 75, 84, 554
MaeIII GTNAC 3 cut(s) 498, 659, 752
MalI GATC 5 cut(s) 92, 378, 525, 774, 824
MboI GATC 5 cut(s) 90, 376, 523, 772, 822
MboII GAAGA 6 cut(s) 361, 376, 385, 640, 725, 813
MflI RGATCY 1 cut(s) 523
MhlI GDGCHC 1 cut(s) 730
MluCI AATT 4 cut(s) 7, 54, 136, 389
MlyI GAGTC 2 cut(s) 506, 826
MnlI CCTC 6 cut(s) 72, 94, 193, 199, 307, 618
MroXI GAANNNNTTC 1 cut(s) 348
MseI TTAA 2 cut(s) 53, 126
MspA1I CMGCKG 1 cut(s) 674
MspI CCGG 6 cut(s) 156, 597, 703, 730, 750, 757
MspR9I CCNGG 5 cut(s) 398, 704, 730, 731, 758
MvaI CCWGG 1 cut(s) 398
MwoI GCNNNNNNNGC 1 cut(s) 704
NciI CCSGG 4 cut(s) 704, 730, 731, 758
NcoI CCATGG 1 cut(s) 483
NdeI CATATG 1 cut(s) 46
NdeII GATC 5 cut(s) 90, 376, 523, 772, 822
NlaIII CATG 3 cut(s) 356, 487, 667
NlaIV GGNNCC 1 cut(s) 727
NmuCI GTSAC 2 cut(s) 498, 659
NspI RCATGY 1 cut(s) 667
PagI TCATGA 1 cut(s) 352
PcsI WCGNNNNNNNCGW 1 cut(s) 516
PdmI GAANNNNTTC 1 cut(s) 348
PkrI GCNGC 1 cut(s) 328
PleI GAGTC 2 cut(s) 505, 826
PpsI GAGTC 2 cut(s) 505, 826
PshBI ATTAAT 1 cut(s) 53
Psp6I CCWGG 1 cut(s) 396
PspEI GGTNACC 1 cut(s) 752
PspGI CCWGG 1 cut(s) 396
PspN4I GGNNCC 1 cut(s) 727
PstNI CAGNNNCTG 1 cut(s) 835
PsuI RGATCY 1 cut(s) 523
PvuII CAGCTG 1 cut(s) 674
RsaI GTAC 4 cut(s) 187, 260, 552, 790
RsaNI GTAC 4 cut(s) 186, 259, 551, 789
SaqAI TTAA 2 cut(s) 53, 126
SatI GCNGC 1 cut(s) 327
Sau3AI GATC 5 cut(s) 90, 376, 523, 772, 822
ScaI AGTACT 2 cut(s) 260, 790
SchI GAGTC 2 cut(s) 506, 826
ScrFI CCNGG 5 cut(s) 398, 704, 730, 731, 758
SduI GDGCHC 1 cut(s) 730
SfaNI GCATC 2 cut(s) 562, 568
SmaI CCCGGG 1 cut(s) 731
SmlI CTYRAG 3 cut(s) 175, 330, 611
SmoI CTYRAG 3 cut(s) 175, 330, 611
Sse9I AATT 4 cut(s) 7, 54, 136, 389
SspMI CTAG 5 cut(s) 14, 66, 75, 84, 554
StyD4I CCNGG 5 cut(s) 396, 702, 728, 729, 756
StyI CCWWGG 1 cut(s) 483
TaaI ACNGT 4 cut(s) 61, 252, 643, 780
TasI AATT 4 cut(s) 7, 54, 136, 389
TatI WGTACW 3 cut(s) 258, 550, 788
Tru1I TTAA 2 cut(s) 53, 126
Tru9I TTAA 2 cut(s) 53, 126
TscAI CASTG 1 cut(s) 646
TseFI GTSAC 2 cut(s) 498, 659
TseI GCWGC 1 cut(s) 326
Tsp45I GTSAC 2 cut(s) 498, 659
TspDTI ATGAA 3 cut(s) 341, 369, 726
TspGWI ACGGA 1 cut(s) 212
TspMI CCCGGG 1 cut(s) 729
TspRI CASTG 1 cut(s) 646
VspI ATTAAT 1 cut(s) 53
XbaI TCTAGA 1 cut(s) 65
XceI RCATGY 1 cut(s) 667
XmaI CCCGGG 1 cut(s) 729
XmnI GAANNNNTTC 1 cut(s) 348
XspI CTAG 5 cut(s) 14, 66, 75, 84, 554
ZrmI AGTACT 2 cut(s) 260, 790
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.