Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0014465

Physical Location & Seq

Genomic Coordinates Forward (+)

27721190 .. 27724954

Gene Structure 3765 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G73710.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2976 bp

ATGCTTCAGCCAAGTCCTCCTCACTACTCTTCCTCTAGAGATGTCAGACATCATCATCATCATCATCATCATCATCATCATCTAGCTCTGAGTTCTAAAGCTAGGGTTTTTCCACTTTCACTTCCCTGTAACTTCTCCTCTAGGGTTTCTTTTAAGCTTCAACTTCACTGCGCCGCTTCTTCCTCTTCTTCAGTTTCTCCACCTCGATGCTCTAAACCTAACCCAAGCTCTCGAAAACGCAAATATGGCGGCGTAATCCCTTCCATTTTGCGTTCTCTTGACTCTTCCACTGATATTGAAACAACTCTAGCTTCTCTTTGTCTCAATTTAAGCCCTAAAGAACAAACTGTTCTTCTTAAAGAGCAGACTCGTTGGGAAAGAGTTCTTCGTGTGTTTCGATTTTTCCAGTCTCACCAAAGTTATGTTCCTAATGTGATTCATTACAACATTGTGTTAAGAGCTTTAGGGAGAGCGGGGAAATGGGATGAATTGAGGCTTTGTTGGATTGAGATGGCTCATAATGGTGTTTTGCCTACTAACAATACTTATGGTATGCTTGTTGATGTTTATGGTAAAGCTGGTCTTGTTAAGGAAGCTCTTCTTTGGATTAAGCATATGGGACAGAGAATGCATTTCCCTGATGAAGTCACTATGGCTACTGTTGTTAGAGTTTTCAAGAACTCCGGTGAGTTTGATCGTGCTGATAGGTTCTTTAAAGGTTGGTGCGCTGGAAAAGTTGATCTTGATTTGGATTCTATTGATGATTTTCCTAAGAATGGTTCAGCTCAATCTCCTGTGAACTTGAAGCAGTTCTTGTCGATGGAGCTTTTTAAGGTTGGTGCAAGGAATCCTATTGAGAAAAGTCTGCATTTTGCATCTGGTTCAGACTCTTCTCCGAGGAAGCCAAGGTTAACTTCCACCTTCAACACTCTGATTGATTTGTATGGAAAGGCAGGTCGTTTAAACGATGCTGCTAATCTCTTCTCGGAGATGTTGAAATCTGGAGTACCTATAGATACTGTAACGTTTAACACGATGATACATACTTGTGGAACTCATGGGCATTTGTCAGAGGCTGAATCCTTGTTGAAGAAGATGGAAGAGAAAGGGATATCCCCTGATACTAAGACATATAATATCCTTTTGTCTCTTCATGCTGATGCTGGGGACATTGAGGCAGCTCTTGAGTACTATAGGAAAATTAGGAAAGTAGGACTTTTTCCTGATACTGTAACTCATCGAGCTGTTCTTCATATCTTGTGTCAGCGGAAAATGGTTGCAGAAGTTGAAGCTGTGATAGCTGAGATGGACAGAAATAGCATTCGCATTGATGAGCACTCTGTTCCTGTTATTATGCAGATGTATGTCAATGAAGGTTTAGTCGTACAGGCAAAAGCTCTGTTTGAGAGGTTCCAGTTGGATTGTGTGCTTTCGTCAACGACACTTGCAGCAGTTATTGATGTCTATGCTGAAAAGGGACTGTGGGTTGAAGCGGAGACTGTGTTCTATGGGAAAAGAAACATGTCAGGCCAGAGGAATGATGTTTTGGAGTACAATGTCATGATCAAGGCTTATGGTAAGGCCAAACTTCATGAGAAAGCACTTTCTCTCTTCAAAGGGATGAAGAACCAAGGGACTTGGCCTGATGAGTGCACTTACAATTCCCTATTCCAGATGCTTGCTGGGGTTGATTTAGTGGACGAAGCCCAGCGGATCTTGGCTGAAATGCTGGATTCGGGCTGTAAACCTGGATGCAAGACCTATGCTGCTATGATAGCTAGCTATGTGCGGCTTGGCCTGTTGTCTGATGCAGTTGACCTGTACGAGGCAATGGAAAAAACAGGGGTGAAACCGAATGAAGTTGTTTATGGTTCCTTAATTAATGGGTTTGCTGAGAGTGGAATGGTCGAAGAAGCGATTCAATACTTTAGAATGATGGAAGAACATGGCGTTCAGTCCAATCATATCGTTCTGACTTCCCTTATCAAGGCTTATAGCAAAGTGGGGTGTCTTGAAGAAGCTAGGAGAGTGTATGACAAAATGAAGGATTCAGAAGGTGGCCCAGATGTTGCTGCATCAAACAGCATGCTAAGTCTGTGTGCAGATCTTGGCATAGTTTCTGAAGCAGAATCCATTTTCAATGCTCTCAGAGAAAAAGGCACATGTGATGTTATTTCGTTTGCAACAATGATGTACTTGTACAAGGGCATGGGCATGCTCGACGAGGCTATTGAAGTGGCTGAAGAAATGAGAGAGTCTGGTCTACTAAGTGACTGCACTTCATTTAATCAGGTTATGGCTTGCTACGCTGCTGATGGGCAGTTAAGTGAATGCTGTGAACTGTTTCATGAGATGTTAGTTGAAAGAAAGCTCTTGCTGGATTGGGGAACATTTAAAACGCTCTTCACGCTCTTGAAGAAAGGTGGGGTGCCAAGTGAAGCTGTGTCGCAGCTACAAACCGCATACAATGAAGCTAAACCACTGGCAACACCAGCAATCACTGCAACTCTGTTCTCAGCCATGGGTTTGTATGCATATGCGCTGGAATCATGCCAAGAGCTCACAAGTGGTGAAATTCCTCGCGAGCATTTTGCATACAACGCAGTGATATACACTTATAGTGCATCAGGAGACATTGACATGGCCCTAAAGGCATACATGAGAATGCAGGAAAAAGGTCTAGAACCAGATATTGTCACGCAAGCCTACCTTGTTGGGATATACGGGAAAGCGGGAATGGTGGAAGGTGTGAAGAGGGTACATAGCCGGCTGACGTTTGGGGAGCTTGAACCAAGCCAATCGTTGTTTAAAGCAGTTAGAGATGCTTATGTGAGTGCAAACAGACAGGACTTGGCTGATGTGGTGAAGAAAGAGATGAGCATTGCTTTTGAAGCTGAAAGGGAGTGTAGTTCAAGATCTGGAGAAGAAGAAGAAGACGATGAAGAGGAAAATTCTGAAGAAGACGAGGCATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

991

Amino Acids

110.66

Weight (kDa)

5.82

Isoelectric Point (pI)

40.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	143 - 189	2e-07	PPR repeat family
PPR_long	PF17177	305 - 479	1.8e-09	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	306 - 350	1.1e-13	PPR repeat family
PPR	PF01535	306 - 336	2e-07	PPR repeat
PPR_1	PF12854	306 - 331	6.7e-07	PPR repeat
PPR_1	PF12854	335 - 367	1.3e-06	PPR repeat
PPR_2	PF13041	339 - 383	2.9e-14	PPR repeat family
PPR	PF01535	341 - 371	3.9e-07	PPR repeat
TPR_24	PF23276	346 - 469	7.4e-09	Fungal tetratrico peptide repeats
PPR_3	PF13812	361 - 419	1.8e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	377 - 422	6.5e-07	PPR repeat family
TPR_24	PF23276	513 - 610	3.1e-09	Fungal tetratrico peptide repeats
PPR_2	PF13041	514 - 561	2.1e-11	PPR repeat family
PPR	PF01535	518 - 545	1.4e-06	PPR repeat
PPR_long	PF17177	525 - 637	1.4e-09	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	548 - 592	8.4e-08	PPR repeat family
PPR_3	PF13812	571 - 630	7.4e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	587 - 631	4.4e-10	PPR repeat family
TPR_24	PF23276	611 - 715	9.4e-07	Fungal tetratrico peptide repeats
PPR_1	PF12854	615 - 647	1e-07	PPR repeat
PPR_2	PF13041	618 - 663	3.2e-07	PPR repeat family
PPR	PF01535	621 - 651	3.5e-07	PPR repeat
PPR_2	PF13041	864 - 900	3.9e-07	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014465)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G73710
fragaria_vesca	FvH4_6g44930
malus_domestica	MD09G1091700.v1.1 MD17G1081600.v1.1
prunus_persica	Prupe.3G233300_v2.0.a1
pyrus_communis	pycom09g01730 pycom17g07990
rosa_chinensis	RchiOBHm_Chr2g0162121
rosa_laevigata	RLG00000021324
rosa_multiflora	Rmu_sc0004020.1_g000031
rosa_roxburghii	Rroxscaffold_2G00088280
rosa_rugosa	Rorug02G0494800
rosa_samantha	Rh2AG561300 Rh2BG574400 Rh2CG544500 Rh2DG584300
rosa_wichuraiana	Rw2G046480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	944
AccB1I	GGYRCC	1 cut(s)	2428
AccBSI	CCGCTC	1 cut(s)	473
AccI	GTMKAC	1 cut(s)	2263
AccII	CGCG	1 cut(s)	2583
AciI	CCGC	9 cut(s)	174, 249, 473, 1267, 1493, 1711, 1789, 2460, 2732
AclI	AACGTT	1 cut(s)	1025
AclWI	GGATC	1 cut(s)	1721
AcsI	RAATTY	2 cut(s)	2574, 2950
AcuI	CTGAAG	4 cut(s)	174, 2142, 2262, 2976
AfaI	GTAC	8 cut(s)	1008, 1190, 1386, 1553, 1823, 2195, 2201, 2760
AfiI	CCNNNNNNNGG	3 cut(s)	776, 1825, 1987
AflIII	ACRYGT	2 cut(s)	1521, 2162
AjnI	CCWGG	1 cut(s)	1747
AjuI	GAANNNNNNNTTGG	6 cut(s)	408, 440, 898, 930, 1529, 1561
AloI	GAACNNNNNNTCC	2 cut(s)	1487, 1519
Alw21I	GWGCWC	3 cut(s)	1338, 1655, 2562
Alw26I	GTCTC	5 cut(s)	326, 414, 1152, 1490, 2625
Alw44I	GTGCAC	1 cut(s)	1651
AlwI	GGATC	1 cut(s)	1721
AlwNI	CAGNNNCTG	1 cut(s)	1076
AoxI	GGCC	6 cut(s)	1528, 1581, 1640, 1795, 2059, 2643
ApaLI	GTGCAC	1 cut(s)	1651
ApeKI	GCWGC	7 cut(s)	971, 1178, 1448, 1766, 2072, 2309, 2449
ApoI	RAATTY	2 cut(s)	2574, 2950
AseI	ATTAAT	1 cut(s)	1881
Asp700I	GAANNNNTTC	5 cut(s)	381, 597, 809, 1917, 2343
AspLEI	GCGC	3 cut(s)	173, 728, 2542
AspS9I	GGNCC	2 cut(s)	2060, 2644
AsuHPI	GGTGA	5 cut(s)	404, 698, 1858, 2582, 2875
AsuNHI	GCTAGC	1 cut(s)	1778
BaeGI	GKGCMC	1 cut(s)	1655
BanI	GGYRCC	1 cut(s)	2428
BanII	GRGCYC	1 cut(s)	2562
BbsI	GAAGAC	2 cut(s)	2940, 2967
Bbv12I	GWGCWC	3 cut(s)	1338, 1655, 2562
BbvI	GCAGC	7 cut(s)	958, 1190, 1460, 1753, 2059, 2296, 2461
BccI	CCATC	6 cut(s)	505, 814, 1090, 1300, 1930, 2309
BcgI	CGANNNNNNTGC	2 cut(s)	2573, 2607
BciT130I	CCWGG	1 cut(s)	1749
BclI	TGATCA	1 cut(s)	1563
BcoDI	GTCTC	5 cut(s)	326, 414, 1152, 1490, 2625
BfaI	CTAG	8 cut(s)	36, 83, 102, 141, 308, 1779, 2022, 2681
BfmI	CTRYAG	2 cut(s)	1011, 1192
BfuAI	ACCTGC	1 cut(s)	944
BglI	GCCNNNNNGGC	1 cut(s)	2651
BglII	AGATCT	2 cut(s)	2104, 2915
BmcAI	AGTACT	1 cut(s)	1190
Bme1390I	CCNGG	1 cut(s)	1749
BmgT120I	GGNCC	2 cut(s)	2060, 2644
BmiI	GGNNCC	3 cut(s)	1412, 1873, 2430
BmrFI	CCNGG	1 cut(s)	1749
BmtI	GCTAGC	1 cut(s)	1782
BpiI	GAAGAC	2 cut(s)	2940, 2967
BpmI	CTGGAG	2 cut(s)	1023, 2940
BpuEI	CTTGAG	1 cut(s)	1205
BsaJI	CCNNGG	4 cut(s)	896, 905, 1630, 2520
BsaWI	WCCGGW	1 cut(s)	683
BsaXI	ACNNNNNCTCC	2 cut(s)	1487, 1517
Bsc4I	CCNNNNNNNGG	3 cut(s)	776, 1825, 1987
Bse118I	RCCGGY	1 cut(s)	2766
Bse1I	ACTGG	3 cut(s)	406, 1414, 2487
Bse3DI	GCAATG	2 cut(s)	1836, 2880
BseBI	CCWGG	1 cut(s)	1749
BseDI	CCNNGG	4 cut(s)	896, 905, 1630, 2520
BseGI	GGATG	3 cut(s)	490, 1626, 1757
BseLI	CCNNNNNNNGG	3 cut(s)	776, 1825, 1987
BseMI	GCAATG	2 cut(s)	1836, 2880
BseMII	CTCAG	5 cut(s)	80, 1293, 1884, 2161, 2529
BseNI	ACTGG	3 cut(s)	406, 1414, 2487
BseRI	GAGGAG	2 cut(s)	9, 127
BseSI	GKGCMC	1 cut(s)	1655
BseXI	GCAGC	7 cut(s)	958, 1190, 1460, 1753, 2059, 2296, 2461
BseYI	CCCAGC	3 cut(s)	1163, 1682, 1707
BsgI	GTGCAG	2 cut(s)	2121, 2260
Bsh1236I	CGCG	1 cut(s)	2583
BshFI	GGCC	6 cut(s)	1530, 1583, 1642, 1797, 2061, 2645
BshNI	GGYRCC	1 cut(s)	2428
BsiHKAI	GWGCWC	3 cut(s)	1338, 1655, 2562
BsiSI	CCGG	2 cut(s)	684, 2767
BslFI	GGGAC	4 cut(s)	633, 1181, 1491, 1648
BslI	CCNNNNNNNGG	3 cut(s)	776, 1825, 1987
BsmAI	GTCTC	5 cut(s)	326, 414, 1152, 1490, 2625
BsmFI	GGGAC	4 cut(s)	633, 1181, 1491, 1648
BsmI	GAATGC	4 cut(s)	633, 1320, 2336, 2670
BsnI	GGCC	6 cut(s)	1530, 1583, 1642, 1797, 2061, 2645
Bsp1286I	GDGCHC	3 cut(s)	1338, 1655, 2562
Bsp1407I	TGTACA	1 cut(s)	2199
Bsp143I	GATC	6 cut(s)	694, 739, 1563, 1713, 2104, 2915
Bsp19I	CCATGG	1 cut(s)	2520
Bsp68I	TCGCGA	1 cut(s)	2583
BspACI	CCGC	9 cut(s)	174, 249, 473, 1267, 1493, 1711, 1789, 2460, 2732
BspANI	GGCC	6 cut(s)	1530, 1583, 1642, 1797, 2061, 2645
BspCNI	CTCAG	5 cut(s)	81, 1294, 1885, 2160, 2528
BspFNI	CGCG	1 cut(s)	2583
BspHI	TCATGA	3 cut(s)	1560, 1591, 2347
BspLI	GGNNCC	3 cut(s)	1412, 1873, 2430
BspMI	ACCTGC	1 cut(s)	944
BspOI	GCTAGC	1 cut(s)	1782
BspPI	GGATC	1 cut(s)	1721
BspQI	GCTCTTC	2 cut(s)	603, 2408
BspT107I	GGYRCC	1 cut(s)	2428
BsrBI	CCGCTC	1 cut(s)	473
BsrDI	GCAATG	2 cut(s)	1836, 2880
BsrFI	RCCGGY	1 cut(s)	2766
BsrGI	TGTACA	1 cut(s)	2199
BsrI	ACTGG	3 cut(s)	406, 1414, 2487
BssAI	RCCGGY	1 cut(s)	2766
BssECI	CCNNGG	4 cut(s)	896, 905, 1630, 2520
BssMI	GATC	6 cut(s)	694, 739, 1563, 1713, 2104, 2915
BssT1I	CCWWGG	3 cut(s)	905, 1630, 2520
Bst2UI	CCWGG	1 cut(s)	1749
Bst4CI	ACNGT	7 cut(s)	349, 661, 1021, 1231, 1482, 1501, 2343
BstAPI	GCANNNNNTGC	1 cut(s)	2501
BstAUI	TGTACA	1 cut(s)	2199
BstC8I	GCNNGC	8 cut(s)	1680, 1780, 2087, 2216, 2302, 2585, 2703, 2768
BstDEI	CTNAG	9 cut(s)	89, 771, 1125, 1302, 1893, 2090, 2147, 2267, 2515
BstDSI	CCRYGG	1 cut(s)	2520
BstENI	CCTNNNNNAGG	2 cut(s)	1823, 1985
BstF5I	GGATG	3 cut(s)	490, 1626, 1757
BstFNI	CGCG	1 cut(s)	2583
BstHHI	GCGC	3 cut(s)	173, 728, 2542
BstKTI	GATC	6 cut(s)	697, 742, 1566, 1716, 2107, 2918
BstMAI	GTCTC	5 cut(s)	326, 414, 1152, 1490, 2625
BstMBI	GATC	6 cut(s)	694, 739, 1563, 1713, 2104, 2915
BstNI	CCWGG	1 cut(s)	1749
BstNSI	RCATGY	4 cut(s)	1525, 2089, 2166, 2218
BstSCI	CCNGG	1 cut(s)	1747
BstSFI	CTRYAG	2 cut(s)	1011, 1192
BstSLI	GKGCMC	1 cut(s)	1655
BstUI	CGCG	1 cut(s)	2583
BstV1I	GCAGC	7 cut(s)	958, 1190, 1460, 1753, 2059, 2296, 2461
BstV2I	GAAGAC	2 cut(s)	2940, 2967
BstX2I	RGATCY	3 cut(s)	1713, 2104, 2915
BstYI	RGATCY	3 cut(s)	1713, 2104, 2915
BsuRI	GGCC	6 cut(s)	1530, 1583, 1642, 1797, 2061, 2645
BtgI	CCRYGG	1 cut(s)	2520
BtsCI	GGATG	3 cut(s)	490, 1626, 1757
BtsI	GCAGTG	3 cut(s)	166, 2499, 2610
BtsIMutI	CAGTG	5 cut(s)	166, 288, 2480, 2499, 2610
BtuMI	TCGCGA	1 cut(s)	2583
BveI	ACCTGC	1 cut(s)	944
Cac8I	GCNNGC	8 cut(s)	1680, 1780, 2087, 2216, 2302, 2585, 2703, 2768
CaiI	CAGNNNCTG	1 cut(s)	1076
CciI	TCATGA	3 cut(s)	1560, 1591, 2347
CfoI	GCGC	3 cut(s)	173, 728, 2542
Cfr10I	RCCGGY	1 cut(s)	2766
Cfr13I	GGNCC	2 cut(s)	2060, 2644
Csp6I	GTAC	8 cut(s)	1007, 1189, 1385, 1552, 1822, 2194, 2200, 2759
CspCI	CAANNNNNGTGG	2 cut(s)	277, 312
CviQI	GTAC	8 cut(s)	1007, 1189, 1385, 1552, 1822, 2194, 2200, 2759
DdeI	CTNAG	9 cut(s)	89, 771, 1125, 1302, 1893, 2090, 2147, 2267, 2515
DpnI	GATC	6 cut(s)	696, 741, 1565, 1715, 2106, 2917
DpnII	GATC	6 cut(s)	694, 739, 1563, 1713, 2104, 2915
DraI	TTTAAA	4 cut(s)	715, 963, 2395, 2809
Ecl136II	GAGCTC	1 cut(s)	2560
Eco130I	CCWWGG	3 cut(s)	905, 1630, 2520
Eco24I	GRGCYC	1 cut(s)	2562
Eco32I	GATATC	1 cut(s)	1113
Eco53kI	GAGCTC	1 cut(s)	2560
Eco57I	CTGAAG	4 cut(s)	174, 2142, 2262, 2976
EcoICRI	GAGCTC	1 cut(s)	2560
EcoNI	CCTNNNNNAGG	2 cut(s)	1823, 1985
EcoRII	CCWGG	1 cut(s)	1747
EcoRV	GATATC	1 cut(s)	1113
EcoT14I	CCWWGG	3 cut(s)	905, 1630, 2520
EcoT22I	ATGCAT	2 cut(s)	633, 2536
EcoT38I	GRGCYC	1 cut(s)	2562
ErhI	CCWWGG	3 cut(s)	905, 1630, 2520
FaqI	GGGAC	4 cut(s)	633, 1181, 1491, 1648
FauI	CCCGC	2 cut(s)	466, 2725
FauNDI	CATATG	2 cut(s)	615, 2536
FbaI	TGATCA	1 cut(s)	1563
FblI	GTMKAC	1 cut(s)	2263
FokI	GGATG	3 cut(s)	497, 1633, 1764
FriOI	GRGCYC	1 cut(s)	2562
FspBI	CTAG	8 cut(s)	36, 83, 102, 141, 308, 1779, 2022, 2681
GlaI	GCGC	3 cut(s)	172, 727, 2541
GsaI	CCCAGC	3 cut(s)	1167, 1686, 1711
GsuI	CTGGAG	2 cut(s)	1023, 2940
HaeIII	GGCC	6 cut(s)	1530, 1583, 1642, 1797, 2061, 2645
HapII	CCGG	2 cut(s)	684, 2767
HhaI	GCGC	3 cut(s)	173, 728, 2542
Hin6I	GCGC	3 cut(s)	171, 726, 2540
HinP1I	GCGC	3 cut(s)	171, 726, 2540
HincII	GTYRAC	3 cut(s)	912, 1437, 1816
HindII	GTYRAC	3 cut(s)	912, 1437, 1816
HindIII	AAGCTT	1 cut(s)	155
HpaI	GTTAAC	1 cut(s)	912
HpaII	CCGG	2 cut(s)	684, 2767
HphI	GGTGA	5 cut(s)	404, 698, 1858, 2582, 2875
Hpy166II	GTNNAC	9 cut(s)	799, 912, 1437, 1653, 1699, 1745, 1816, 2264, 2339
Hpy8I	GTNNAC	9 cut(s)	799, 912, 1437, 1653, 1699, 1745, 1816, 2264, 2339
Hpy99I	CGWCG	1 cut(s)	2225
HpyAV	CCTTC	6 cut(s)	270, 931, 1367, 2038, 2048, 2738
HpyCH4III	ACNGT	7 cut(s)	349, 661, 1021, 1231, 1482, 1501, 2343
HpyCH4IV	ACGT	2 cut(s)	1025, 2774
HpyF3I	CTNAG	9 cut(s)	89, 771, 1125, 1302, 1893, 2090, 2147, 2267, 2515
HpySE526I	ACGT	2 cut(s)	1025, 2774
HspAI	GCGC	3 cut(s)	171, 726, 2540
KroI	GCCGGC	1 cut(s)	2766
KroNI	GCCGGC	1 cut(s)	2768
Ksp22I	TGATCA	1 cut(s)	1563
KspAI	GTTAAC	1 cut(s)	912
Kzo9I	GATC	6 cut(s)	694, 739, 1563, 1713, 2104, 2915
LguI	GCTCTTC	2 cut(s)	603, 2408
LmnI	GCTCC	2 cut(s)	823, 2782
Lsp1109I	GCAGC	7 cut(s)	958, 1190, 1460, 1753, 2059, 2296, 2461
MaeI	CTAG	8 cut(s)	36, 83, 102, 141, 308, 1779, 2022, 2681
MaeII	ACGT	2 cut(s)	1025, 2774
MaeIII	GTNAC	6 cut(s)	128, 646, 1021, 1231, 2270, 2695
MalI	GATC	6 cut(s)	696, 741, 1565, 1715, 2106, 2917
MbiI	CCGCTC	1 cut(s)	473
MboI	GATC	6 cut(s)	694, 739, 1563, 1713, 2104, 2915
MflI	RGATCY	3 cut(s)	1713, 2104, 2915
MhlI	GDGCHC	3 cut(s)	1338, 1655, 2562
MluCI	AATT	7 cut(s)	325, 488, 1200, 1660, 1878, 2574, 2950
MlyI	GAGTC	4 cut(s)	275, 361, 881, 2264
MmeI	TCCRAC	2 cut(s)	482, 1398
Mph1103I	ATGCAT	2 cut(s)	633, 2536
MroNI	GCCGGC	1 cut(s)	2766
MroXI	GAANNNNTTC	5 cut(s)	381, 597, 809, 1917, 2343
MslI	CAYNNNNRTG	7 cut(s)	205, 522, 1047, 1158, 2213, 2639, 2663
MspA1I	CMGCKG	2 cut(s)	1267, 1711
MspI	CCGG	2 cut(s)	684, 2767
MspR9I	CCNGG	1 cut(s)	1749
MssI	GTTTAAAC	1 cut(s)	963
Mva1269I	GAATGC	4 cut(s)	633, 1320, 2336, 2670
MvaI	CCWGG	1 cut(s)	1749
MvnI	CGCG	1 cut(s)	2583
NaeI	GCCGGC	1 cut(s)	2768
NcoI	CCATGG	1 cut(s)	2520
NdeI	CATATG	2 cut(s)	615, 2536
NdeII	GATC	6 cut(s)	694, 739, 1563, 1713, 2104, 2915
NgoMIV	GCCGGC	1 cut(s)	2766
NheI	GCTAGC	1 cut(s)	1778
NlaIV	GGNNCC	3 cut(s)	1412, 1873, 2430
NmuCI	GTSAC	3 cut(s)	646, 2270, 2695
NruI	TCGCGA	1 cut(s)	2583
NsiI	ATGCAT	2 cut(s)	633, 2536
NspI	RCATGY	4 cut(s)	1525, 2089, 2166, 2218
PacI	TTAATTAA	1 cut(s)	1881
PaeI	GCATGC	2 cut(s)	2089, 2218
PagI	TCATGA	3 cut(s)	1560, 1591, 2347
PciI	ACATGT	2 cut(s)	1521, 2162
PciSI	GCTCTTC	2 cut(s)	603, 2408
PcsI	WCGNNNNNNNCGW	2 cut(s)	394, 1031
PctI	GAATGC	4 cut(s)	633, 1320, 2336, 2670
PdiI	GCCGGC	1 cut(s)	2768
PdmI	GAANNNNTTC	5 cut(s)	381, 597, 809, 1917, 2343
PfeI	GAWTC	9 cut(s)	436, 752, 847, 1079, 1733, 1918, 2048, 2129, 2546
PleI	GAGTC	4 cut(s)	275, 361, 881, 2263
PmeI	GTTTAAAC	1 cut(s)	963
PpsI	GAGTC	4 cut(s)	275, 361, 881, 2263
PscI	ACATGT	2 cut(s)	1521, 2162
PshBI	ATTAAT	1 cut(s)	1881
Psp124BI	GAGCTC	1 cut(s)	2562
Psp1406I	AACGTT	1 cut(s)	1025
Psp6I	CCWGG	1 cut(s)	1747
PspFI	CCCAGC	3 cut(s)	1163, 1682, 1707
PspGI	CCWGG	1 cut(s)	1747
PspN4I	GGNNCC	3 cut(s)	1412, 1873, 2430
PspPI	GGNCC	2 cut(s)	2060, 2644
PstNI	CAGNNNCTG	1 cut(s)	1076
PsuI	RGATCY	3 cut(s)	1713, 2104, 2915
RruI	TCGCGA	1 cut(s)	2583
RsaI	GTAC	8 cut(s)	1008, 1190, 1386, 1553, 1823, 2195, 2201, 2760
RsaNI	GTAC	8 cut(s)	1007, 1189, 1385, 1552, 1822, 2194, 2200, 2759
RseI	CAYNNNNRTG	7 cut(s)	205, 522, 1047, 1158, 2213, 2639, 2663
SacI	GAGCTC	1 cut(s)	2562
SapI	GCTCTTC	2 cut(s)	603, 2408
Sau3AI	GATC	6 cut(s)	694, 739, 1563, 1713, 2104, 2915
Sau96I	GGNCC	2 cut(s)	2060, 2644
ScaI	AGTACT	1 cut(s)	1190
SchI	GAGTC	4 cut(s)	275, 361, 881, 2264
ScrFI	CCNGG	1 cut(s)	1749
SduI	GDGCHC	3 cut(s)	1338, 1655, 2562
SfcI	CTRYAG	2 cut(s)	1011, 1192
SmiMI	CAYNNNNRTG	7 cut(s)	205, 522, 1047, 1158, 2213, 2639, 2663
SmlI	CTYRAG	1 cut(s)	1184
SmoI	CTYRAG	1 cut(s)	1184
SphI	GCATGC	2 cut(s)	2089, 2218
Sse9I	AATT	7 cut(s)	325, 488, 1200, 1660, 1878, 2574, 2950
SsiI	CCGC	9 cut(s)	174, 249, 473, 1267, 1493, 1711, 1789, 2460, 2732
SspMI	CTAG	8 cut(s)	36, 83, 102, 141, 308, 1779, 2022, 2681
SstI	GAGCTC	1 cut(s)	2562
StyD4I	CCNGG	1 cut(s)	1747
StyI	CCWWGG	3 cut(s)	905, 1630, 2520
TaaI	ACNGT	7 cut(s)	349, 661, 1021, 1231, 1482, 1501, 2343
TaiI	ACGT	2 cut(s)	1028, 2777
TaqI	TCGA	7 cut(s)	205, 232, 397, 818, 1240, 1908, 2220
TasI	AATT	7 cut(s)	325, 488, 1200, 1660, 1878, 2574, 2950
TatI	WGTACW	4 cut(s)	1188, 1551, 2193, 2199
TauI	GCSGC	3 cut(s)	176, 252, 1792
TfiI	GAWTC	9 cut(s)	436, 752, 847, 1079, 1733, 1918, 2048, 2129, 2546
TscAI	CASTG	5 cut(s)	173, 295, 2487, 2506, 2610
TseFI	GTSAC	3 cut(s)	646, 2270, 2695
TseI	GCWGC	7 cut(s)	971, 1178, 1448, 1766, 2072, 2309, 2449
Tsp45I	GTSAC	3 cut(s)	646, 2270, 2695
TspRI	CASTG	5 cut(s)	173, 295, 2487, 2506, 2610
VneI	GTGCAC	1 cut(s)	1651
VspI	ATTAAT	1 cut(s)	1881
XagI	CCTNNNNNAGG	2 cut(s)	1823, 1985
XapI	RAATTY	2 cut(s)	2574, 2950
XbaI	TCTAGA	2 cut(s)	35, 2680
XceI	RCATGY	4 cut(s)	1525, 2089, 2166, 2218
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1679
XmiI	GTMKAC	1 cut(s)	2263
XmnI	GAANNNNTTC	5 cut(s)	381, 597, 809, 1917, 2343
XspI	CTAG	8 cut(s)	36, 83, 102, 141, 308, 1779, 2022, 2681
ZrmI	AGTACT	1 cut(s)	1190
Zsp2I	ATGCAT	2 cut(s)	633, 2536

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.