AT1G73885

transferase activity, transferring hexosyl groups

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0013424
Physical Location & Seq
Forward (+)
27786864 .. 27787708
845 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G73885.1

Sequence Viewer

Length: 579 bp
ATGGCTCTCACCGTGAGCAGCGGTGGCGGAGGAGCTAGAATCCGCTGCAACGACCTCACCGATTCTTCTCGTAACCCTTTCTCCACCTTCCGACTCGTAAACTTCCCTAATCCATCAAGAACCGAACAGCAGGAAGAGGGAAACGAAGGTTTTGACGGCGAGAACCCGCCGTCTCAGATCGTTATCAACGACGAAGATGGAGATAGAACGGTGGTGAATACTCGATTCAGAGGTGATCCGAAAGATGCGCCGAAATTTGCCATTAAGGATCTTCCTGGACTTGAACCAGATCCTTTTGAAGGTGAGAAGTGGGATGGTCTAGGTTTCTTCGTTCAGTACTTGTGGGCTTTCGGAATCCTTTTCGCGCTAATCTCTGGTGGACTTGCGGCGGGGACGTATAACGAAGGTGCGACGGATTTCAAGGAGACGCCAGTATATAAAGAGGCGATTCAATCTCGTGACCTTCTTGATGAAGCAGAGAGTTCAAACTCTGAAGATGTGTTTGAGTCCAACCCAACAGAAGTGGCTCCTACCATATTCCAAGTTGATCTTGAGCTTGTTGTGTTCATAATGTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

192

Amino Acids

21.11

Weight (kDa)

4.16

Isoelectric Point (pI)

39.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013424)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G73885
fragaria_vesca FvH4_5g12290
malus_domestica MD06G1215200.v1.1 MD14G1226000.v1.1
prunus_persica Prupe.5G220500_v2.0.a1
pyrus_communis pycom06g19180 pycom14g18750
rosa_chinensis RchiOBHm_Chr7g0185261
rosa_laevigata RLG00000004926
rosa_multiflora Rmu_co7958283.1_g000001 Rmu_sc0008496.1_g000017
rosa_roxburghii Rroxscaffold_3G00269100
rosa_rugosa Rorug06G0467400
rosa_samantha Rh7AG075600 Rh7BG071900 Rh7CG073100 Rh7DG072500
rosa_wichuraiana Rw7G006030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 365
AciI CCGC 6 cut(s) 21, 27, 43, 167, 386, 389
AclWI GGATC 3 cut(s) 230, 276, 284
AcsI RAATTY 1 cut(s) 254
AcuI CTGAAG 1 cut(s) 513
AcyI GRCGYC 1 cut(s) 428
AfaI GTAC 1 cut(s) 338
AfiI CCNNNNNNNGG 1 cut(s) 299
AgsI TTSAA 5 cut(s) 284, 299, 421, 452, 486
AjnI CCWGG 1 cut(s) 274
AluBI AGCT 2 cut(s) 35, 556
AluI AGCT 2 cut(s) 35, 556
Alw26I GTCTC 2 cut(s) 177, 419
AlwI GGATC 3 cut(s) 230, 276, 284
ApeKI GCWGC 2 cut(s) 18, 45
ApoI RAATTY 1 cut(s) 254
AspLEI GCGC 2 cut(s) 250, 367
AsuHPI GGTGA 4 cut(s) 49, 226, 245, 314
BauI CACGAG 1 cut(s) 456
BbvI GCAGC 2 cut(s) 30, 32
BccI CCATC 3 cut(s) 121, 191, 308
BceAI ACGGC 2 cut(s) 154, 172
BciT130I CCWGG 1 cut(s) 276
BcoDI GTCTC 2 cut(s) 177, 419
BfaI CTAG 2 cut(s) 36, 320
BisI GCNGC 3 cut(s) 19, 46, 387
BlsI GCNGC 3 cut(s) 20, 47, 388
BmcAI AGTACT 1 cut(s) 338
Bme1390I CCNGG 1 cut(s) 276
BmiI GGNNCC 1 cut(s) 528
BmrFI CCNGG 1 cut(s) 276
BmsI GCATC 1 cut(s) 235
BpuEI CTTGAG 1 cut(s) 572
BsaBI GATNNNNATC 1 cut(s) 182
BsaHI GRCGYC 1 cut(s) 428
BsaXI ACNNNNNCTCC 2 cut(s) 65, 95
Bsc4I CCNNNNNNNGG 1 cut(s) 299
Bse1I ACTGG 1 cut(s) 431
Bse8I GATNNNNATC 1 cut(s) 182
BseBI CCWGG 1 cut(s) 276
BseGI GGATG 1 cut(s) 319
BseJI GATNNNNATC 1 cut(s) 182
BseLI CCNNNNNNNGG 1 cut(s) 299
BseMII CTCAG 1 cut(s) 188
BseNI ACTGG 1 cut(s) 431
BseRI GAGGAG 1 cut(s) 45
BseXI GCAGC 2 cut(s) 30, 32
Bsh1236I CGCG 1 cut(s) 365
BslFI GGGAC 1 cut(s) 406
BslI CCNNNNNNNGG 1 cut(s) 299
BsmAI GTCTC 2 cut(s) 177, 419
BsmBI CGTCTC 2 cut(s) 177, 419
BsmFI GGGAC 1 cut(s) 406
Bsp143I GATC 5 cut(s) 177, 235, 268, 289, 547
BspACI CCGC 6 cut(s) 21, 27, 43, 167, 386, 389
BspCNI CTCAG 1 cut(s) 187
BspFNI CGCG 1 cut(s) 365
BspLI GGNNCC 1 cut(s) 528
BspPI GGATC 3 cut(s) 230, 276, 284
BsrI ACTGG 1 cut(s) 431
BssMI GATC 5 cut(s) 177, 235, 268, 289, 547
BssNI GRCGYC 1 cut(s) 428
BssSI CACGAG 1 cut(s) 456
Bst2BI CACGAG 1 cut(s) 456
Bst2UI CCWGG 1 cut(s) 276
Bst4CI ACNGT 2 cut(s) 13, 211
Bst6I CTCTTC 1 cut(s) 129
BstACI GRCGYC 1 cut(s) 428
BstDEI CTNAG 1 cut(s) 174
BstENI CCTNNNNNAGG 1 cut(s) 297
BstF5I GGATG 1 cut(s) 319
BstFNI CGCG 1 cut(s) 365
BstHHI GCGC 2 cut(s) 250, 367
BstKTI GATC 5 cut(s) 180, 238, 271, 292, 550
BstMAI GTCTC 2 cut(s) 177, 419
BstMBI GATC 5 cut(s) 177, 235, 268, 289, 547
BstMWI GCNNNNNNNGC 1 cut(s) 24
BstNI CCWGG 1 cut(s) 276
BstSCI CCNGG 1 cut(s) 274
BstUI CGCG 1 cut(s) 365
BstV1I GCAGC 2 cut(s) 30, 32
BstX2I RGATCY 2 cut(s) 268, 289
BstYI RGATCY 2 cut(s) 268, 289
BtsCI GGATG 1 cut(s) 319
CfoI GCGC 2 cut(s) 250, 367
CseI GACGC 1 cut(s) 436
Csp6I GTAC 1 cut(s) 337
CspCI CAANNNNNGTGG 2 cut(s) 504, 539
CviJI RGCY 5 cut(s) 5, 35, 347, 527, 556
CviKI_1 RGCY 5 cut(s) 5, 35, 347, 527, 556
CviQI GTAC 1 cut(s) 337
DdeI CTNAG 1 cut(s) 174
DpnI GATC 5 cut(s) 179, 237, 270, 291, 549
DpnII GATC 5 cut(s) 177, 235, 268, 289, 547
Eam1104I CTCTTC 1 cut(s) 129
EarI CTCTTC 1 cut(s) 129
EciI GGCGGA 1 cut(s) 42
Eco57I CTGAAG 1 cut(s) 513
EcoNI CCTNNNNNAGG 1 cut(s) 297
EcoRII CCWGG 1 cut(s) 274
Esp3I CGTCTC 2 cut(s) 177, 419
FaiI YATR 6 cut(s) 399, 436, 438, 536, 569, 577
FalI AAGNNNNNCTT 2 cut(s) 534, 566
FaqI GGGAC 1 cut(s) 406
FauI CCCGC 2 cut(s) 174, 382
Fnu4HI GCNGC 3 cut(s) 19, 46, 387
FokI GGATG 1 cut(s) 326
Fsp4HI GCNGC 3 cut(s) 19, 46, 387
FspBI CTAG 2 cut(s) 36, 320
GlaI GCGC 2 cut(s) 249, 366
GluI GCNGC 3 cut(s) 19, 46, 387
HgaI GACGC 1 cut(s) 436
HhaI GCGC 2 cut(s) 250, 367
Hin1I GRCGYC 1 cut(s) 428
Hin6I GCGC 2 cut(s) 248, 365
HinP1I GCGC 2 cut(s) 248, 365
HinfI GANTC 7 cut(s) 39, 62, 93, 225, 354, 448, 506
HphI GGTGA 4 cut(s) 49, 226, 245, 314
Hpy166II GTNNAC 2 cut(s) 100, 380
Hpy188I TCNGA 6 cut(s) 92, 177, 230, 240, 353, 493
Hpy188III TCNNGA 4 cut(s) 117, 458, 467, 551
Hpy8I GTNNAC 2 cut(s) 100, 380
Hpy99I CGWCG 2 cut(s) 194, 415
HpyAV CCTTC 5 cut(s) 97, 140, 293, 398, 473
HpyCH4III ACNGT 2 cut(s) 13, 211
HpyCH4IV ACGT 1 cut(s) 395
HpyCH4V TGCA 1 cut(s) 48
HpyF10VI GCNNNNNNNGC 1 cut(s) 24
HpyF3I CTNAG 1 cut(s) 174
HpySE526I ACGT 1 cut(s) 395
Hsp92I GRCGYC 1 cut(s) 428
HspAI GCGC 2 cut(s) 248, 365
Kzo9I GATC 5 cut(s) 177, 235, 268, 289, 547
LmnI GCTCC 2 cut(s) 32, 532
LpnPI CCDG 6 cut(s) 116, 261, 288, 300, 360, 444
Lsp1109I GCAGC 2 cut(s) 30, 32
LweI GCATC 1 cut(s) 235
MaeI CTAG 2 cut(s) 36, 320
MaeII ACGT 1 cut(s) 395
MaeIII GTNAC 2 cut(s) 71, 458
MalI GATC 5 cut(s) 179, 237, 270, 291, 549
MboI GATC 5 cut(s) 177, 235, 268, 289, 547
MboII GAAGA 6 cut(s) 57, 146, 206, 263, 319, 506
MflI RGATCY 2 cut(s) 268, 289
MluCI AATT 1 cut(s) 254
MlyI GAGTC 2 cut(s) 87, 515
MmeI TCCRAC 2 cut(s) 115, 534
MnlI CCTC 5 cut(s) 23, 65, 130, 224, 436
MseI TTAA 1 cut(s) 264
MspA1I CMGCKG 2 cut(s) 21, 45
MspR9I CCNGG 1 cut(s) 276
MvaI CCWGG 1 cut(s) 276
MvnI CGCG 1 cut(s) 365
MwoI GCNNNNNNNGC 1 cut(s) 24
NdeII GATC 5 cut(s) 177, 235, 268, 289, 547
NlaIV GGNNCC 1 cut(s) 528
NmuCI GTSAC 1 cut(s) 458
PcsI WCGNNNNNNNCGW 2 cut(s) 57, 186
PfeI GAWTC 5 cut(s) 39, 62, 225, 354, 448
PfoI TCCNGGA 1 cut(s) 274
PkrI GCNGC 3 cut(s) 20, 47, 388
PleI GAGTC 2 cut(s) 87, 514
PpsI GAGTC 2 cut(s) 87, 514
Psp6I CCWGG 1 cut(s) 274
PspGI CCWGG 1 cut(s) 274
PspN4I GGNNCC 1 cut(s) 528
PsuI RGATCY 2 cut(s) 268, 289
RsaI GTAC 1 cut(s) 338
RsaNI GTAC 1 cut(s) 337
SaqAI TTAA 1 cut(s) 264
SatI GCNGC 3 cut(s) 19, 46, 387
Sau3AI GATC 5 cut(s) 177, 235, 268, 289, 547
ScaI AGTACT 1 cut(s) 338
SchI GAGTC 2 cut(s) 87, 515
ScrFI CCNGG 1 cut(s) 276
SfaNI GCATC 1 cut(s) 235
SmlI CTYRAG 1 cut(s) 551
SmoI CTYRAG 1 cut(s) 551
Sse9I AATT 1 cut(s) 254
SsiI CCGC 6 cut(s) 21, 27, 43, 167, 386, 389
SspMI CTAG 2 cut(s) 36, 320
StyD4I CCNGG 1 cut(s) 274
TaaI ACNGT 2 cut(s) 13, 211
TaiI ACGT 1 cut(s) 398
TaqI TCGA 1 cut(s) 223
TasI AATT 1 cut(s) 254
TatI WGTACW 1 cut(s) 336
TauI GCSGC 1 cut(s) 389
TfiI GAWTC 5 cut(s) 39, 62, 225, 354, 448
Tru1I TTAA 1 cut(s) 264
Tru9I TTAA 1 cut(s) 264
TseFI GTSAC 1 cut(s) 458
TseI GCWGC 2 cut(s) 18, 45
Tsp45I GTSAC 1 cut(s) 458
TspDTI ATGAA 2 cut(s) 486, 556
TspGWI ACGGA 1 cut(s) 428
XagI CCTNNNNNAGG 1 cut(s) 297
XapI RAATTY 1 cut(s) 254
XspI CTAG 2 cut(s) 36, 320
ZrmI AGTACT 1 cut(s) 338
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.