Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0010325

Physical Location & Seq

Genomic Coordinates Forward (+)

28065014 .. 28067423

Gene Structure 2410 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G74700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 843 bp

ATGGAGAAGAAGAAAGCAATGCAAATTGAAGGTTACCCGATCGAGGGATTGTCGATTGGTGGGCACGAGACGTGCATCATATTTCCATCTCTTCGGATAGCTTTCGACATTGGTCGTTGCCCACATCGCGCAATTTCTCAAGACTTCCTCTTCATCTCTCACTCTCACATGGATCATATCGGTGGATTACCAATGTATGTTGCTACTAGAGGCTTGTACAAAATGAAGCCTCCAACGATTATAGTACCCGCATCCATTAAAGAAACTGTTGAGAGTTTATTCGAAGTTCACAGAAAGTTAGATTCTTCAGAGCTAAAGCACAATCTTGTTGGCTTGGACATAGGGGAGGAGTTTATTATAAGGAAAGATCTCAAAGTCAAAGCCTTTAAGACATTCCATGTCATCCAAAGCCAGGGTTATGTAGTGTATTCAACTAAATATAAACTCAAGAAGGAATATATTGGCCTATCTGGAAATGAAATTAAGAACTTGAAGGTTTCAGGTGTTGAGATTACAGACAGCATAATAACTCCTGAAGTTGCTTTTACGGGAGATACAACGTCGGATTTTGTAGTTGATGAAACTAATGCTGATGCTCTCAAGGCAAAGGTTCTCGTCATGGAGAGCACATTTCTTGATGATTCGGTATCGGTAGAGCATGCGAGAGATTATGGACATATCCATATATCTGAGATAGTAAATCATGCTGAAAAGTTTGAAAACAAAGCAATCCTGCTAATCCACTTTTCGGCTCGGTATACAGTGAAGGAAATCGAAGATGCGGTTTCTGCATTGCCTCCACCTTTAGAGGGACGTGTGTTTGCACTAACACAAGGATTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004540 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006396 GO:0006399 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0031123 GO:0034414 GO:0034470 GO:0034641 GO:0034660 GO:0042779 GO:0042780 GO:0042781 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043628 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0140098 GO:1901360 GO:1905267

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

Lactamase_B_2

Protein Analysis

280

Amino Acids

31.33

Weight (kDa)

6.11

Isoelectric Point (pI)

36.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lactamase_B_2	PF12706	48 - 249	1.1e-12	Beta-lactamase superfamily domain
Anti-Pycsar_Apyc1	PF23023	48 - 187	1.8e-08	Anti-Pycsar protein Apyc1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010325)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74700
fragaria_vesca	FvH4_5g15380 FvH4_5g15380 FvH4_5g15380 FvH4_5g15380
malus_domestica	MD06G1188900.v1.1
prunus_persica	Prupe.5G187500_v2.0.a1
pyrus_communis	pycom06g16770
rosa_chinensis	RchiOBHm_Chr7g0180691
rosa_laevigata	RLG00000005240
rosa_multiflora	Rmu_sc0007457.1_g000026 Rmu_sc0023372.1_g000013
rosa_roxburghii	Rroxscaffold_3G00272650
rosa_rugosa	Rorug06G0434900 Rorug06G0434900 Rorug06G0434900
rosa_samantha	Rh7AG036600 Rh7BG036400 Rh7CG038100 Rh7DG036600
rosa_wichuraiana	Rw7G003020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	359
AccI	GTMKAC	1 cut(s)	758
AccII	CGCG	1 cut(s)	129
AciI	CCGC	2 cut(s)	249, 782
AclWI	GGATC	1 cut(s)	180
AcuI	CTGAAG	2 cut(s)	291, 555
AfaI	GTAC	2 cut(s)	218, 246
AfiI	CCNNNNNNNGG	5 cut(s)	43, 44, 412, 748, 809
AflIII	ACRYGT	1 cut(s)	814
AgsI	TTSAA	4 cut(s)	29, 432, 493, 719
AjiI	CACGTC	2 cut(s)	72, 815
AjnI	CCWGG	1 cut(s)	411
AluBI	AGCT	2 cut(s)	101, 313
AluI	AGCT	2 cut(s)	101, 313
Alw21I	GWGCWC	1 cut(s)	629
Alw26I	GTCTC	1 cut(s)	62
AlwI	GGATC	1 cut(s)	180
AoxI	GGCC	1 cut(s)	463
AspLEI	GCGC	1 cut(s)	131
AsuII	TTCGAA	1 cut(s)	282
BaeGI	GKGCMC	1 cut(s)	66
BauI	CACGAG	1 cut(s)	65
Bbv12I	GWGCWC	1 cut(s)	629
BccI	CCATC	1 cut(s)	94
BciT130I	CCWGG	1 cut(s)	413
BcoDI	GTCTC	1 cut(s)	62
BfaI	CTAG	1 cut(s)	207
BglII	AGATCT	1 cut(s)	367
Bme1390I	CCNGG	1 cut(s)	413
BmgBI	CACGTC	2 cut(s)	72, 815
BmrFI	CCNGG	1 cut(s)	413
BmsI	GCATC	4 cut(s)	84, 260, 583, 769
BoxI	GACNNNNGTC	1 cut(s)	111
Bpu14I	TTCGAA	1 cut(s)	282
BpuEI	CTTGAG	3 cut(s)	123, 431, 584
BsaJI	CCNNGG	1 cut(s)	412
Bsc4I	CCNNNNNNNGG	5 cut(s)	43, 44, 412, 748, 809
Bse3DI	GCAATG	2 cut(s)	24, 791
BseBI	CCWGG	1 cut(s)	413
BseDI	CCNNGG	1 cut(s)	412
BseGI	GGATG	2 cut(s)	251, 402
BseLI	CCNNNNNNNGG	5 cut(s)	43, 44, 412, 748, 809
BseMI	GCAATG	2 cut(s)	24, 791
BseMII	CTCAG	1 cut(s)	681
BseRI	GAGGAG	1 cut(s)	362
BseSI	GKGCMC	1 cut(s)	66
Bsh1236I	CGCG	1 cut(s)	129
Bsh1285I	CGRYCG	1 cut(s)	42
BshFI	GGCC	1 cut(s)	465
BsiEI	CGRYCG	1 cut(s)	42
BsiHKAI	GWGCWC	1 cut(s)	629
BslFI	GGGAC	1 cut(s)	825
BslI	CCNNNNNNNGG	5 cut(s)	43, 44, 412, 748, 809
BsmAI	GTCTC	1 cut(s)	62
BsmBI	CGTCTC	1 cut(s)	62
BsmFI	GGGAC	1 cut(s)	825
BsnI	GGCC	1 cut(s)	465
Bsp119I	TTCGAA	1 cut(s)	282
Bsp1286I	GDGCHC	2 cut(s)	66, 629
Bsp1407I	TGTACA	1 cut(s)	216
Bsp143I	GATC	3 cut(s)	39, 172, 367
BspACI	CCGC	2 cut(s)	249, 782
BspANI	GGCC	1 cut(s)	465
BspCNI	CTCAG	1 cut(s)	682
BspFNI	CGCG	1 cut(s)	129
BspPI	GGATC	1 cut(s)	180
BspT104I	TTCGAA	1 cut(s)	282
BsrDI	GCAATG	2 cut(s)	24, 791
BsrGI	TGTACA	1 cut(s)	216
BssECI	CCNNGG	1 cut(s)	412
BssMI	GATC	3 cut(s)	39, 172, 367
BssNAI	GTATAC	1 cut(s)	759
BssSI	CACGAG	1 cut(s)	65
Bst1107I	GTATAC	1 cut(s)	759
Bst2BI	CACGAG	1 cut(s)	65
Bst2UI	CCWGG	1 cut(s)	413
Bst4CI	ACNGT	2 cut(s)	268, 763
Bst6I	CTCTTC	2 cut(s)	96, 155
BstAUI	TGTACA	1 cut(s)	216
BstBI	TTCGAA	1 cut(s)	282
BstC8I	GCNNGC	1 cut(s)	660
BstDEI	CTNAG	1 cut(s)	690
BstEII	GGTNACC	1 cut(s)	32
BstF5I	GGATG	2 cut(s)	251, 402
BstFNI	CGCG	1 cut(s)	129
BstHHI	GCGC	1 cut(s)	131
BstKTI	GATC	3 cut(s)	42, 175, 370
BstMAI	GTCTC	1 cut(s)	62
BstMBI	GATC	3 cut(s)	39, 172, 367
BstMCI	CGRYCG	1 cut(s)	42
BstMWI	GCNNNNNNNGC	3 cut(s)	126, 602, 788
BstNI	CCWGG	1 cut(s)	413
BstNSI	RCATGY	1 cut(s)	662
BstPAI	GACNNNNGTC	1 cut(s)	111
BstPI	GGTNACC	1 cut(s)	32
BstSCI	CCNGG	1 cut(s)	411
BstSLI	GKGCMC	1 cut(s)	66
BstUI	CGCG	1 cut(s)	129
BstX2I	RGATCY	1 cut(s)	367
BstYI	RGATCY	1 cut(s)	367
BstZ17I	GTATAC	1 cut(s)	759
BsuRI	GGCC	1 cut(s)	465
BtgZI	GCGATG	1 cut(s)	110
BtrI	CACGTC	2 cut(s)	72, 815
BtsCI	GGATG	2 cut(s)	251, 402
BtsIMutI	CAGTG	1 cut(s)	768
Cac8I	GCNNGC	1 cut(s)	660
CfoI	GCGC	1 cut(s)	131
Csp6I	GTAC	2 cut(s)	217, 245
CviAII	CATG	5 cut(s)	169, 398, 619, 659, 704
CviJI	RGCY	9 cut(s)	101, 213, 229, 313, 333, 383, 411, 465, 752
CviKI_1	RGCY	9 cut(s)	101, 213, 229, 313, 333, 383, 411, 465, 752
CviQI	GTAC	2 cut(s)	217, 245
DdeI	CTNAG	1 cut(s)	690
DpnI	GATC	3 cut(s)	41, 174, 369
DpnII	GATC	3 cut(s)	39, 172, 367
Eam1104I	CTCTTC	2 cut(s)	96, 155
EarI	CTCTTC	2 cut(s)	96, 155
Eco57I	CTGAAG	2 cut(s)	291, 555
Eco91I	GGTNACC	1 cut(s)	32
EcoO65I	GGTNACC	1 cut(s)	32
EcoRII	CCWGG	1 cut(s)	411
Esp3I	CGTCTC	1 cut(s)	62
FaeI	CATG	5 cut(s)	172, 401, 622, 662, 707
FaqI	GGGAC	1 cut(s)	825
FatI	CATG	5 cut(s)	168, 397, 618, 658, 703
FauI	CCCGC	1 cut(s)	256
FblI	GTMKAC	1 cut(s)	758
FokI	GGATG	2 cut(s)	238, 389
FspBI	CTAG	1 cut(s)	207
GlaI	GCGC	1 cut(s)	130
HaeIII	GGCC	1 cut(s)	465
HhaI	GCGC	1 cut(s)	131
Hin1II	CATG	5 cut(s)	172, 401, 622, 662, 707
Hin6I	GCGC	1 cut(s)	129
HinP1I	GCGC	1 cut(s)	129
HinfI	GANTC	3 cut(s)	302, 641, 837
Hpy166II	GTNNAC	2 cut(s)	289, 759
Hpy188I	TCNGA	4 cut(s)	96, 310, 565, 691
Hpy188III	TCNNGA	5 cut(s)	140, 448, 471, 533, 635
Hpy8I	GTNNAC	2 cut(s)	289, 759
Hpy99I	CGWCG	1 cut(s)	565
HpyAV	CCTTC	4 cut(s)	23, 445, 487, 760
HpyCH4III	ACNGT	2 cut(s)	268, 763
HpyCH4IV	ACGT	3 cut(s)	71, 560, 814
HpyCH4V	TGCA	4 cut(s)	22, 75, 791, 824
HpyF10VI	GCNNNNNNNGC	3 cut(s)	126, 602, 788
HpyF3I	CTNAG	1 cut(s)	690
HpySE526I	ACGT	3 cut(s)	71, 560, 814
Hsp92II	CATG	5 cut(s)	172, 401, 622, 662, 707
HspAI	GCGC	1 cut(s)	129
Kzo9I	GATC	3 cut(s)	39, 172, 367
LpnPI	CCDG	6 cut(s)	398, 425, 456, 486, 546, 746
LweI	GCATC	4 cut(s)	84, 260, 583, 769
MaeI	CTAG	1 cut(s)	207
MaeII	ACGT	3 cut(s)	71, 560, 814
MaeIII	GTNAC	1 cut(s)	32
MalI	GATC	3 cut(s)	41, 174, 369
MboI	GATC	3 cut(s)	39, 172, 367
MboII	GAAGA	6 cut(s)	19, 22, 83, 142, 297, 788
MflI	RGATCY	1 cut(s)	367
MhlI	GDGCHC	2 cut(s)	66, 629
MluCI	AATT	3 cut(s)	24, 132, 480
MmeI	TCCRAC	2 cut(s)	257, 543
MnlI	CCTC	7 cut(s)	37, 158, 203, 240, 340, 802, 807
MseI	TTAA	3 cut(s)	258, 387, 483
MslI	CAYNNNNRTG	1 cut(s)	180
MspR9I	CCNGG	1 cut(s)	413
MvaI	CCWGG	1 cut(s)	413
MvnI	CGCG	1 cut(s)	129
MwoI	GCNNNNNNNGC	3 cut(s)	126, 602, 788
NdeII	GATC	3 cut(s)	39, 172, 367
NlaIII	CATG	5 cut(s)	172, 401, 622, 662, 707
NspI	RCATGY	1 cut(s)	662
NspV	TTCGAA	1 cut(s)	282
PaeI	GCATGC	1 cut(s)	662
PfeI	GAWTC	3 cut(s)	302, 641, 837
Ple19I	CGATCG	1 cut(s)	42
PshAI	GACNNNNGTC	1 cut(s)	111
PsiI	TTATAA	1 cut(s)	359
Psp6I	CCWGG	1 cut(s)	411
PspEI	GGTNACC	1 cut(s)	32
PspGI	CCWGG	1 cut(s)	411
PsuI	RGATCY	1 cut(s)	367
PvuI	CGATCG	1 cut(s)	42
RsaI	GTAC	2 cut(s)	218, 246
RsaNI	GTAC	2 cut(s)	217, 245
RseI	CAYNNNNRTG	1 cut(s)	180
SaqAI	TTAA	3 cut(s)	258, 387, 483
Sau3AI	GATC	3 cut(s)	39, 172, 367
ScrFI	CCNGG	1 cut(s)	413
SduI	GDGCHC	2 cut(s)	66, 629
SfaNI	GCATC	4 cut(s)	84, 260, 583, 769
SfuI	TTCGAA	1 cut(s)	282
SmiMI	CAYNNNNRTG	1 cut(s)	180
SmlI	CTYRAG	3 cut(s)	138, 446, 599
SmoI	CTYRAG	3 cut(s)	138, 446, 599
SphI	GCATGC	1 cut(s)	662
Sse9I	AATT	3 cut(s)	24, 132, 480
SsiI	CCGC	2 cut(s)	249, 782
SspMI	CTAG	1 cut(s)	207
StyD4I	CCNGG	1 cut(s)	411
TaaI	ACNGT	2 cut(s)	268, 763
TaiI	ACGT	3 cut(s)	74, 563, 817
TaqI	TCGA	5 cut(s)	42, 53, 105, 282, 774
TasI	AATT	3 cut(s)	24, 132, 480
TatI	WGTACW	1 cut(s)	216
TfiI	GAWTC	3 cut(s)	302, 641, 837
Tru1I	TTAA	3 cut(s)	258, 387, 483
Tru9I	TTAA	3 cut(s)	258, 387, 483
TscAI	CASTG	1 cut(s)	768
TspDTI	ATGAA	4 cut(s)	142, 239, 492, 594
TspRI	CASTG	1 cut(s)	768
XceI	RCATGY	1 cut(s)	662
XmiI	GTMKAC	1 cut(s)	758
XspI	CTAG	1 cut(s)	207

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.