RING-type E3 ubiquitin transferase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G20780 AT1G20780 AT1G20780 AT1G76390 AT1G76390 |
| fragaria_vesca | FvH4_5g25630 FvH4_5g25630 |
| malus_domestica | MD00G1113800.v1.1 MD06G1007200.v1.1 |
| prunus_persica | Prupe.5G009100_v2.0.a1 Prupe.5G009100_v2.0.a1 |
| pyrus_communis | pycom06g00630 pycom16g26080 |
| rosa_chinensis | RchiOBHm_Chr7g0215921 |
| rosa_laevigata | RLG00000002607 |
| rosa_multiflora | Rmu_sc0006240.1_g000004 |
| rosa_roxburghii | Rroxscaffold_3G00243800 |
| rosa_rugosa | Rorug07G0156800 |
| rosa_samantha | Rh7AG294900 Rh7BG286900 Rh7CG315000 Rh7DG297700 |
| rosa_wichuraiana | Rw7G025050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 820 |
| AccII | CGCG | 1 cut(s) | 975 |
| AciI | CCGC | 5 cut(s) | 487, 1073, 1292, 1414, 1967 |
| AclWI | GGATC | 4 cut(s) | 685, 1748, 1987, 2270 |
| AcsI | RAATTY | 3 cut(s) | 772, 1062, 2227 |
| AcuI | CTGAAG | 2 cut(s) | 576, 675 |
| AcyI | GRCGYC | 2 cut(s) | 1770, 2331 |
| AfaI | GTAC | 3 cut(s) | 574, 1172, 2151 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 608, 1032, 2352 |
| AflIII | ACRYGT | 1 cut(s) | 421 |
| AjnI | CCWGG | 1 cut(s) | 58 |
| AjuI | GAANNNNNNNTTGG | 1 cut(s) | 33 |
| AleI | CACNNNNGTG | 1 cut(s) | 1458 |
| Alw21I | GWGCWC | 2 cut(s) | 645, 1009 |
| Alw26I | GTCTC | 6 cut(s) | 347, 555, 597, 1138, 1757, 2036 |
| AlwI | GGATC | 4 cut(s) | 685, 1748, 1987, 2270 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1568 |
| AoxI | GGCC | 1 cut(s) | 1100 |
| ApoI | RAATTY | 3 cut(s) | 772, 1062, 2227 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 346, 378 |
| AseI | ATTAAT | 2 cut(s) | 1332, 2165 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 795 |
| AspS9I | GGNCC | 4 cut(s) | 1100, 1196, 1265, 2099 |
| AsuHPI | GGTGA | 5 cut(s) | 849, 1196, 1735, 1747, 2413 |
| AvaII | GGWCC | 3 cut(s) | 1196, 1265, 2099 |
| BanII | GRGCYC | 2 cut(s) | 645, 1009 |
| Bbv12I | GWGCWC | 2 cut(s) | 645, 1009 |
| BbvCI | CCTCAGC | 1 cut(s) | 435 |
| BccI | CCATC | 8 cut(s) | 17, 610, 799, 1355, 1373, 1952, 2004, 2245 |
| BciT130I | CCWGG | 1 cut(s) | 60 |
| BciVI | GTATCC | 1 cut(s) | 1951 |
| BcoDI | GTCTC | 6 cut(s) | 347, 555, 597, 1138, 1757, 2036 |
| BfaI | CTAG | 4 cut(s) | 1311, 1469, 1979, 2286 |
| BfmI | CTRYAG | 4 cut(s) | 576, 824, 1560, 2316 |
| BfuI | GTATCC | 1 cut(s) | 1951 |
| Bme1390I | CCNGG | 1 cut(s) | 60 |
| Bme18I | GGWCC | 3 cut(s) | 1196, 1265, 2099 |
| BmgT120I | GGNCC | 4 cut(s) | 1100, 1196, 1265, 2099 |
| BmrFI | CCNGG | 1 cut(s) | 60 |
| BmsI | GCATC | 1 cut(s) | 292 |
| Bpu10I | CCTNAGC | 1 cut(s) | 435 |
| BpuEI | CTTGAG | 1 cut(s) | 579 |
| Bsa29I | ATCGAT | 1 cut(s) | 957 |
| BsaAI | YACGTR | 3 cut(s) | 269, 407, 2270 |
| BsaBI | GATNNNNATC | 1 cut(s) | 809 |
| BsaHI | GRCGYC | 2 cut(s) | 1770, 2331 |
| BsaJI | CCNNGG | 6 cut(s) | 59, 685, 876, 1276, 1672, 1758 |
| BsaWI | WCCGGW | 3 cut(s) | 859, 1058, 1692 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 552, 582 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 608, 1032, 2352 |
| Bse1I | ACTGG | 1 cut(s) | 1267 |
| Bse8I | GATNNNNATC | 1 cut(s) | 809 |
| BseBI | CCWGG | 1 cut(s) | 60 |
| BseCI | ATCGAT | 1 cut(s) | 957 |
| BseDI | CCNNGG | 6 cut(s) | 59, 685, 876, 1276, 1672, 1758 |
| BseGI | GGATG | 4 cut(s) | 28, 1022, 1845, 2256 |
| BseJI | GATNNNNATC | 1 cut(s) | 809 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 608, 1032, 2352 |
| BseMII | CTCAG | 7 cut(s) | 342, 449, 947, 1371, 1539, 1581, 1949 |
| BseNI | ACTGG | 1 cut(s) | 1267 |
| BseRI | GAGGAG | 1 cut(s) | 1914 |
| Bsh1236I | CGCG | 1 cut(s) | 975 |
| BshFI | GGCC | 1 cut(s) | 1102 |
| BshVI | ATCGAT | 1 cut(s) | 957 |
| BsiHKAI | GWGCWC | 2 cut(s) | 645, 1009 |
| BsiSI | CCGG | 3 cut(s) | 860, 1059, 1693 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 608, 1032, 2352 |
| BsmAI | GTCTC | 6 cut(s) | 347, 555, 597, 1138, 1757, 2036 |
| BsnI | GGCC | 1 cut(s) | 1102 |
| Bsp1286I | GDGCHC | 2 cut(s) | 645, 1009 |
| Bsp1407I | TGTACA | 1 cut(s) | 2149 |
| Bsp143I | GATC | 9 cut(s) | 244, 677, 958, 1518, 1740, 1816, 1992, 2065, 2262 |
| Bsp19I | CCATGG | 2 cut(s) | 685, 876 |
| Bsp68I | TCGCGA | 1 cut(s) | 975 |
| BspACI | CCGC | 5 cut(s) | 487, 1073, 1292, 1414, 1967 |
| BspANI | GGCC | 1 cut(s) | 1102 |
| BspCNI | CTCAG | 7 cut(s) | 343, 448, 946, 1370, 1540, 1582, 1950 |
| BspDI | ATCGAT | 1 cut(s) | 957 |
| BspFNI | CGCG | 1 cut(s) | 975 |
| BspHI | TCATGA | 1 cut(s) | 478 |
| BspMAI | CTGCAG | 3 cut(s) | 828, 1564, 2320 |
| BspPI | GGATC | 4 cut(s) | 685, 1748, 1987, 2270 |
| BsrGI | TGTACA | 1 cut(s) | 2149 |
| BsrI | ACTGG | 1 cut(s) | 1267 |
| BssECI | CCNNGG | 6 cut(s) | 59, 685, 876, 1276, 1672, 1758 |
| BssMI | GATC | 9 cut(s) | 244, 677, 958, 1518, 1740, 1816, 1992, 2065, 2262 |
| BssNI | GRCGYC | 2 cut(s) | 1770, 2331 |
| BssT1I | CCWWGG | 5 cut(s) | 685, 876, 1276, 1672, 1758 |
| Bst2UI | CCWGG | 1 cut(s) | 60 |
| Bst4CI | ACNGT | 8 cut(s) | 197, 568, 745, 940, 1492, 1835, 1937, 2138 |
| Bst6I | CTCTTC | 4 cut(s) | 276, 513, 528, 837 |
| BstACI | GRCGYC | 2 cut(s) | 1770, 2331 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 112 |
| BstAUI | TGTACA | 1 cut(s) | 2149 |
| BstBAI | YACGTR | 3 cut(s) | 269, 407, 2270 |
| BstC8I | GCNNGC | 1 cut(s) | 369 |
| BstDSI | CCRYGG | 2 cut(s) | 685, 876 |
| BstF5I | GGATG | 4 cut(s) | 28, 1022, 1845, 2256 |
| BstFNI | CGCG | 1 cut(s) | 975 |
| BstKTI | GATC | 9 cut(s) | 247, 680, 961, 1521, 1743, 1819, 1995, 2068, 2265 |
| BstMAI | GTCTC | 6 cut(s) | 347, 555, 597, 1138, 1757, 2036 |
| BstMBI | GATC | 9 cut(s) | 244, 677, 958, 1518, 1740, 1816, 1992, 2065, 2262 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 112, 551, 981, 1004, 1108, 1565, 2111, 2375 |
| BstNI | CCWGG | 1 cut(s) | 60 |
| BstSCI | CCNGG | 1 cut(s) | 58 |
| BstSFI | CTRYAG | 4 cut(s) | 576, 824, 1560, 2316 |
| BstSNI | TACGTA | 3 cut(s) | 269, 407, 2270 |
| BstUI | CGCG | 1 cut(s) | 975 |
| BstX2I | RGATCY | 2 cut(s) | 1992, 2262 |
| BstYI | RGATCY | 2 cut(s) | 1992, 2262 |
| Bsu15I | ATCGAT | 1 cut(s) | 957 |
| BsuI | GTATCC | 1 cut(s) | 1951 |
| BsuRI | GGCC | 1 cut(s) | 1102 |
| BsuTUI | ATCGAT | 1 cut(s) | 957 |
| BtgI | CCRYGG | 2 cut(s) | 685, 876 |
| BtsCI | GGATG | 4 cut(s) | 28, 1022, 1845, 2256 |
| BtsIMutI | CAGTG | 5 cut(s) | 240, 564, 1260, 1488, 1545 |
| BtuMI | TCGCGA | 1 cut(s) | 975 |
| Cac8I | GCNNGC | 1 cut(s) | 369 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1568 |
| CciI | TCATGA | 1 cut(s) | 478 |
| Cfr13I | GGNCC | 4 cut(s) | 1100, 1196, 1265, 2099 |
| ClaI | ATCGAT | 1 cut(s) | 957 |
| CseI | GACGC | 2 cut(s) | 1778, 2339 |
| Csp6I | GTAC | 3 cut(s) | 573, 1171, 2150 |
| CviAII | CATG | 8 cut(s) | 479, 686, 877, 979, 1397, 1456, 1953, 2078 |
| CviQI | GTAC | 3 cut(s) | 573, 1171, 2150 |
| DpnI | GATC | 9 cut(s) | 246, 679, 960, 1520, 1742, 1818, 1994, 2067, 2264 |
| DpnII | GATC | 9 cut(s) | 244, 677, 958, 1518, 1740, 1816, 1992, 2065, 2262 |
| DraI | TTTAAA | 1 cut(s) | 906 |
| Eam1104I | CTCTTC | 4 cut(s) | 276, 513, 528, 837 |
| EarI | CTCTTC | 4 cut(s) | 276, 513, 528, 837 |
| Ecl136II | GAGCTC | 2 cut(s) | 643, 1007 |
| Eco105I | TACGTA | 3 cut(s) | 269, 407, 2270 |
| Eco130I | CCWWGG | 5 cut(s) | 685, 876, 1276, 1672, 1758 |
| Eco24I | GRGCYC | 2 cut(s) | 645, 1009 |
| Eco47I | GGWCC | 3 cut(s) | 1196, 1265, 2099 |
| Eco53kI | GAGCTC | 2 cut(s) | 643, 1007 |
| Eco57I | CTGAAG | 2 cut(s) | 576, 675 |
| EcoICRI | GAGCTC | 2 cut(s) | 643, 1007 |
| EcoRI | GAATTC | 1 cut(s) | 1062 |
| EcoRII | CCWGG | 1 cut(s) | 58 |
| EcoT14I | CCWWGG | 5 cut(s) | 685, 876, 1276, 1672, 1758 |
| EcoT22I | ATGCAT | 1 cut(s) | 117 |
| EcoT38I | GRGCYC | 2 cut(s) | 645, 1009 |
| ErhI | CCWWGG | 5 cut(s) | 685, 876, 1276, 1672, 1758 |
| FaeI | CATG | 8 cut(s) | 482, 689, 880, 982, 1400, 1459, 1956, 2081 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 247, 279 |
| FatI | CATG | 8 cut(s) | 478, 685, 876, 978, 1396, 1455, 1952, 2077 |
| FblI | GTMKAC | 1 cut(s) | 820 |
| FokI | GGATG | 4 cut(s) | 35, 1009, 1832, 2263 |
| FriOI | GRGCYC | 2 cut(s) | 645, 1009 |
| FspBI | CTAG | 4 cut(s) | 1311, 1469, 1979, 2286 |
| HaeIII | GGCC | 1 cut(s) | 1102 |
| HapII | CCGG | 3 cut(s) | 860, 1059, 1693 |
| HgaI | GACGC | 2 cut(s) | 1778, 2339 |
| Hin1I | GRCGYC | 2 cut(s) | 1770, 2331 |
| Hin1II | CATG | 8 cut(s) | 482, 689, 880, 982, 1400, 1459, 1956, 2081 |
| HincII | GTYRAC | 1 cut(s) | 200 |
| HindII | GTYRAC | 1 cut(s) | 200 |
| HindIII | AAGCTT | 5 cut(s) | 81, 311, 1372, 1430, 2023 |
| HinfI | GANTC | 5 cut(s) | 1305, 1689, 1876, 1889, 2215 |
| HpaII | CCGG | 3 cut(s) | 860, 1059, 1693 |
| HphI | GGTGA | 5 cut(s) | 849, 1196, 1735, 1747, 2413 |
| Hpy166II | GTNNAC | 5 cut(s) | 200, 821, 857, 1162, 2329 |
| Hpy8I | GTNNAC | 5 cut(s) | 200, 821, 857, 1162, 2329 |
| HpyCH4III | ACNGT | 8 cut(s) | 197, 568, 745, 940, 1492, 1835, 1937, 2138 |
| HpyCH4IV | ACGT | 4 cut(s) | 268, 406, 421, 2269 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 112, 551, 981, 1004, 1108, 1565, 2111, 2375 |
| HpySE526I | ACGT | 4 cut(s) | 268, 406, 421, 2269 |
| Hsp92I | GRCGYC | 2 cut(s) | 1770, 2331 |
| Hsp92II | CATG | 8 cut(s) | 482, 689, 880, 982, 1400, 1459, 1956, 2081 |
| Kzo9I | GATC | 9 cut(s) | 244, 677, 958, 1518, 1740, 1816, 1992, 2065, 2262 |
| LmnI | GCTCC | 2 cut(s) | 689, 1004 |
| LweI | GCATC | 1 cut(s) | 292 |
| MaeI | CTAG | 4 cut(s) | 1311, 1469, 1979, 2286 |
| MaeII | ACGT | 4 cut(s) | 268, 406, 421, 2269 |
| MaeIII | GTNAC | 4 cut(s) | 124, 269, 330, 2311 |
| MalI | GATC | 9 cut(s) | 246, 679, 960, 1520, 1742, 1818, 1994, 2067, 2264 |
| MboI | GATC | 9 cut(s) | 244, 677, 958, 1518, 1740, 1816, 1992, 2065, 2262 |
| MflI | RGATCY | 2 cut(s) | 1992, 2262 |
| MhlI | GDGCHC | 2 cut(s) | 645, 1009 |
| MluCI | AATT | 6 cut(s) | 50, 411, 772, 1062, 2166, 2227 |
| MlyI | GAGTC | 1 cut(s) | 1299 |
| MmeI | TCCRAC | 7 cut(s) | 1144, 1174, 1270, 1282, 1474, 1854, 2077 |
| Mph1103I | ATGCAT | 1 cut(s) | 117 |
| MroXI | GAANNNNTTC | 1 cut(s) | 795 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1458, 2082 |
| MspA1I | CMGCKG | 3 cut(s) | 623, 1361, 1565 |
| MspI | CCGG | 3 cut(s) | 860, 1059, 1693 |
| MspR9I | CCNGG | 1 cut(s) | 60 |
| MvaI | CCWGG | 1 cut(s) | 60 |
| MvnI | CGCG | 1 cut(s) | 975 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 112, 551, 981, 1004, 1108, 1565, 2111, 2375 |
| NcoI | CCATGG | 2 cut(s) | 685, 876 |
| NdeII | GATC | 9 cut(s) | 244, 677, 958, 1518, 1740, 1816, 1992, 2065, 2262 |
| NlaIII | CATG | 8 cut(s) | 482, 689, 880, 982, 1400, 1459, 1956, 2081 |
| NmuCI | GTSAC | 2 cut(s) | 124, 330 |
| NruI | TCGCGA | 1 cut(s) | 975 |
| NsiI | ATGCAT | 1 cut(s) | 117 |
| OliI | CACNNNNGTG | 1 cut(s) | 1458 |
| PagI | TCATGA | 1 cut(s) | 478 |
| PdmI | GAANNNNTTC | 1 cut(s) | 795 |
| PfeI | GAWTC | 4 cut(s) | 1689, 1876, 1889, 2215 |
| PleI | GAGTC | 1 cut(s) | 1299 |
| PpsI | GAGTC | 1 cut(s) | 1299 |
| Ppu21I | YACGTR | 3 cut(s) | 269, 407, 2270 |
| PshBI | ATTAAT | 2 cut(s) | 1332, 2165 |
| Psp124BI | GAGCTC | 2 cut(s) | 645, 1009 |
| Psp6I | CCWGG | 1 cut(s) | 58 |
| PspGI | CCWGG | 1 cut(s) | 58 |
| PspPI | GGNCC | 4 cut(s) | 1100, 1196, 1265, 2099 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1154, 1186 |
| PstI | CTGCAG | 3 cut(s) | 828, 1564, 2320 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1568 |
| PsuI | RGATCY | 2 cut(s) | 1992, 2262 |
| PvuII | CAGCTG | 3 cut(s) | 623, 1361, 1565 |
| RruI | TCGCGA | 1 cut(s) | 975 |
| RsaI | GTAC | 3 cut(s) | 574, 1172, 2151 |
| RsaNI | GTAC | 3 cut(s) | 573, 1171, 2150 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1458, 2082 |
| SacI | GAGCTC | 2 cut(s) | 645, 1009 |
| Sau3AI | GATC | 9 cut(s) | 244, 677, 958, 1518, 1740, 1816, 1992, 2065, 2262 |
| Sau96I | GGNCC | 4 cut(s) | 1100, 1196, 1265, 2099 |
| SchI | GAGTC | 1 cut(s) | 1299 |
| ScrFI | CCNGG | 1 cut(s) | 60 |
| SduI | GDGCHC | 2 cut(s) | 645, 1009 |
| SfaNI | GCATC | 1 cut(s) | 292 |
| SfcI | CTRYAG | 4 cut(s) | 576, 824, 1560, 2316 |
| SinI | GGWCC | 3 cut(s) | 1196, 1265, 2099 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1458, 2082 |
| SmlI | CTYRAG | 1 cut(s) | 594 |
| SmoI | CTYRAG | 1 cut(s) | 594 |
| SnaBI | TACGTA | 3 cut(s) | 269, 407, 2270 |
| Sse9I | AATT | 6 cut(s) | 50, 411, 772, 1062, 2166, 2227 |
| SsiI | CCGC | 5 cut(s) | 487, 1073, 1292, 1414, 1967 |
| SspI | AATATT | 1 cut(s) | 361 |
| SspMI | CTAG | 4 cut(s) | 1311, 1469, 1979, 2286 |
| SstI | GAGCTC | 2 cut(s) | 645, 1009 |
| StyD4I | CCNGG | 1 cut(s) | 58 |
| StyI | CCWWGG | 5 cut(s) | 685, 876, 1276, 1672, 1758 |
| TaaI | ACNGT | 8 cut(s) | 197, 568, 745, 940, 1492, 1835, 1937, 2138 |
| TaiI | ACGT | 4 cut(s) | 271, 409, 424, 2272 |
| TasI | AATT | 6 cut(s) | 50, 411, 772, 1062, 2166, 2227 |
| TatI | WGTACW | 1 cut(s) | 2149 |
| TfiI | GAWTC | 4 cut(s) | 1689, 1876, 1889, 2215 |
| TscAI | CASTG | 5 cut(s) | 247, 571, 1267, 1495, 1552 |
| TseFI | GTSAC | 2 cut(s) | 124, 330 |
| Tsp45I | GTSAC | 2 cut(s) | 124, 330 |
| TspDTI | ATGAA | 6 cut(s) | 495, 546, 1427, 1941, 2094, 2187 |
| TspGWI | ACGGA | 1 cut(s) | 619 |
| TspRI | CASTG | 5 cut(s) | 247, 571, 1267, 1495, 1552 |
| VpaK11BI | GGWCC | 3 cut(s) | 1196, 1265, 2099 |
| VspI | ATTAAT | 2 cut(s) | 1332, 2165 |
| XapI | RAATTY | 3 cut(s) | 772, 1062, 2227 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1372 |
| XmiI | GTMKAC | 1 cut(s) | 820 |
| XmnI | GAANNNNTTC | 1 cut(s) | 795 |
| XspI | CTAG | 4 cut(s) | 1311, 1469, 1979, 2286 |
| Zsp2I | ATGCAT | 1 cut(s) | 117 |