Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0008636

Physical Location & Seq

Genomic Coordinates Reverse (-)

36893140 .. 36896188

Gene Structure 3049 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002607

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2442 bp

ATGGCTGAAAACTGGCAGGGGAGTTATGACTCCGGCAGCCAGTCAGATGACAGCTATAGATTTGAGAGGCTGCACATTGAGCCTATTTATGATTCATTCTTTTGCCGCTTAACGAAGCAAGTTATGCGGGACCCTGTTACCTTAGAAAATGGGCAAACATTTGAACGCGAAGCAATTGAAAAGTGGTTCAGGGAGTGCAGGGAGAGTGGAAGGAATTTACAGTGCCCACTCACACTAAAAGAATTAAAAAGCGCTGAATTGAAGCCGAGCATAGCTTTGCGAAACACCATTGAAGAGTGGAGTGCTAGGAATGAAGCTGCTCAGCTTGATATGGCTCGTAAATCATTGAATTCGAGCAGTTCAGAAGATGATATTCTTTTGGCCTTGGAGTATGTCCAGCAAATCTGCAAGAAGAGCAGATCAAATAAGCACATTGCACGAAATACAGGATTGTTGCCCATGATCATTGACATGTTGAAGAGCAGCAGTCGTAGAGTTAGGTGTAAATCTTTGGACACCCTAAGAATTGTTGTAGAGGACGATTCTGAAAATAAGGAAATATTGGCAGAGGGGGACACTGTACGCTCAATAGTAAAGTTCTTGTCTAATGAGCAATCTAAAGAGAGAGAGGAAGCTGTCTCTTTGCTATATGAACTATCCAAATCCGAAGCCTTATGTGAGAAGATTGGTTCAATTCCCGGAGCAATTCTAATGTTGGTTGGAATGACAACCAGCAAATCAGATAACATTTTGACTGTTGAGAGAGCTGAGAAAACATTAGAGAATCTGGAGAAGTGTGAGAGCAATGTGCTTCAGATGGCTGAAAATGGTAGACTGCAGGCTCTTCTGACACAAATTCTTGAAGGCCCCCCAGAAACTAAACTATCGATGTCTAATTTCCTTGGCGACCTGGTTTTGGACAATGATATAAAGGTCCAAGTGGCTAAAAGTCTGGGTTCATCTTTGATCAATATCATGAGAAGTGGTAATATGCAGTCAAGAGAAGCTGCTTTGAAAGCTCTAAACCAAATTTCATCTTGTGAGGCAAGTGCCAGGGTGCTGATAGAGGCAGGAATACTTCCATCTCTGGTCAAAGACCTCTTTACTGTTGGCCCTCATCAGCTTCCTATGCGACTCAAAGAGGTTGCTGCAACAATTCTTGCTAATATTGTTATCTCAGACTATGACTTTGATTCCATATTAGTTGGACCTGATCACCAGACTCTAGTCTCAGAAGACATAGTCCACAACCTACTACATTTAATTAGCAACACAGGCCCAGCAATCGAGTGCAAGCTTCTCCAGGTTCTTGTTGGACTCACTCTCTCTCCCTCTACTGTTTTGAGTGTTGTTGCCGCCATTAAAAGCTCTGGCGCCATTATTAGTTTGGTGCAGTTTATTGAAGCTCCACAAAAGGAGTTGCGTGTGGCTTGCATTAAACTTCTCCAAAACCTCTCCCCACACGTGGGTCAGGAACTAGCTGATGCTCTACGTGGCACAGTGGGCCAACTTGGCAGCCTAATCAAAGTAATATCAGAAAATATTTCAATCACTGACGAGCAAGCAGCAGCCATTGGCCTCTTAGCTGAACTTCCGGAGAGGGATCTGGGCCTCGCCCGACAAATGCTAGATGAAGGTGCCTTCCAACTGGTGTATTCCAGAGTAGTTAAGATACGACAAGGATGGACTAAGGGGGGCCGCTTTGTCACACCATTTCTAGAAGGGCTTGTACGGGTTCTAGCAAGGGTTACTCTTGTGTTGGCTGATGAGCAAGATGCAATTATACTCTGCCGTGAGCTTAATGTTGCAGCCCTTTTCATTGAGCTTCTTCAATCCAATGGACTGGACAATGTACAGATGAGTTCTGCCGCAGCATTGGAGAACTTATCACAAGAATCCAAAAATTTGACAAGATTTCCTGAGTTGCCTACCCCTGGTGTTTGTGCCTCAATTTTCCCATGCTTTAGCAAGCAACCTACCATAAATGGACTGTGTCGGCTTCACCGTGGCACATGCTCACTTAGAGAAAGTTTTTGTCTCTTGGAAGGACAGGCTGTGGACAAATTGGTAGCTCTTCTTGACCACACAAATGAGAAGGTGGTTGAAGCAGCCCTTGCAGCATTGTCTACTTTGTTGGATGATGGGGTTGATATTGAACAAGGGGTTTTGGTATTGTGTGAAGCAGAGGGAGTCAGACCCATTCTAGATGTGTTACTAGAGAAACGGACAGAGAATCTGAGGAGGAGGGCAGTTTGGGTAGTTGAGAGACTATTGAGGAGTGATGAGATAGCCTATGAAGTGTCTGGAGATCCAAATGTGAGTACTGCACTTGTTGATGCATTCCAGCATGGTGACTATCGAACCCGACAGATTGCCGAACGTGCTTTGAAGCATGTTGACAGGTTACCAAACTTCTCTGGAGTGTTTCCAAGTGCAGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006807 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009889 GO:0009890 GO:0009892 GO:0009894 GO:0009987 GO:0010115 GO:0010150 GO:0010271 GO:0010380 GO:0010565 GO:0016020 GO:0016567 GO:0016740 GO:0019216 GO:0019222 GO:0019538 GO:0019747 GO:0019787 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031329 GO:0032446 GO:0032501 GO:0032502 GO:0033612 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043455 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045827 GO:0045833 GO:0046890 GO:0048366 GO:0048367 GO:0048519 GO:0048523 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051055 GO:0051171 GO:0051193 GO:0062012 GO:0062014 GO:0065007 GO:0070647 GO:0070696 GO:0071704 GO:0071944 GO:0080090 GO:0090056 GO:0090359 GO:0090693 GO:0099402 GO:0140096 GO:1901401 GO:1901404 GO:1901463 GO:1901564 GO:1902930 GO:1902931

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

814

Amino Acids

89.66

Weight (kDa)

5.22

Isoelectric Point (pI)

45.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U-box	PF04564	31 - 105	8.8e-14	U-box domain
ARM_ARMC5	PF24768	111 - 285	7.5e-06	ARMC5
ARM_PUB	PF25598	114 - 221	3.5e-06	Plant U-box protein ARM repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008636)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20780 AT1G20780 AT1G20780 AT1G76390 AT1G76390
fragaria_vesca	FvH4_5g25630 FvH4_5g25630
malus_domestica	MD00G1113800.v1.1 MD06G1007200.v1.1
prunus_persica	Prupe.5G009100_v2.0.a1 Prupe.5G009100_v2.0.a1
pyrus_communis	pycom06g00630 pycom16g26080
rosa_chinensis	RchiOBHm_Chr7g0215921
rosa_laevigata	RLG00000002607
rosa_multiflora	Rmu_sc0006240.1_g000004
rosa_roxburghii	Rroxscaffold_3G00243800
rosa_rugosa	Rorug07G0156800
rosa_samantha	Rh7AG294900 Rh7BG286900 Rh7CG315000 Rh7DG297700
rosa_wichuraiana	Rw7G025050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	1373, 1637
AccI	GTMKAC	2 cut(s)	832, 2126
AccII	CGCG	1 cut(s)	168
AccIII	TCCGGA	1 cut(s)	1594
AciI	CCGC	5 cut(s)	106, 127, 1356, 1699, 1869
AclWI	GGATC	2 cut(s)	1611, 2303
AcsI	RAATTY	5 cut(s)	214, 349, 855, 1029, 1903
AcuI	CTGAAG	1 cut(s)	797
AcvI	CACGTG	1 cut(s)	1465
AcyI	GRCGYC	1 cut(s)	1374
AfaI	GTAC	4 cut(s)	582, 1731, 1854, 2323
AfeI	AGCGCT	1 cut(s)	253
AfiI	CCNNNNNNNGG	5 cut(s)	916, 1465, 1466, 1934, 2435
AflIII	ACRYGT	2 cut(s)	471, 1462
AjnI	CCWGG	4 cut(s)	909, 1052, 1302, 1933
Alw26I	GTCTC	4 cut(s)	643, 1234, 2042, 2260
AlwI	GGATC	2 cut(s)	1611, 2303
Aor13HI	TCCGGA	1 cut(s)	1594
Aor51HI	AGCGCT	1 cut(s)	253
AoxI	GGCC	8 cut(s)	381, 865, 1111, 1276, 1504, 1576, 1609, 1696
ApoI	RAATTY	5 cut(s)	214, 349, 855, 1029, 1903
ArsI	GACNNNNNNTTYG	2 cut(s)	1172, 1204
AspLEI	GCGC	2 cut(s)	254, 1376
AspS9I	GGNCC	9 cut(s)	130, 866, 934, 1112, 1208, 1277, 1504, 1609, 1696
AsuC2I	CCSGG	1 cut(s)	699
AsuHPI	GGTGA	3 cut(s)	1208, 1994, 2363
AvaII	GGWCC	3 cut(s)	130, 934, 1208
BaeGI	GKGCMC	1 cut(s)	227
BanI	GGYRCC	2 cut(s)	1373, 1637
BarI	GAAGNNNNNNTAC	2 cut(s)	1713, 1745
BbrPI	CACGTG	1 cut(s)	1465
BbsI	GAAGAC	1 cut(s)	1242
BccI	CCATC	4 cut(s)	811, 1090, 1677, 2135
BceAI	ACGGC	1 cut(s)	1776
BciT130I	CCWGG	4 cut(s)	911, 1054, 1304, 1935
BclI	TGATCA	3 cut(s)	462, 966, 1213
BcnI	CCSGG	1 cut(s)	699
BcoDI	GTCTC	4 cut(s)	643, 1234, 2042, 2260
BfaI	CTAG	8 cut(s)	306, 1226, 1478, 1628, 1718, 1739, 2204, 2216
BfmI	CTRYAG	2 cut(s)	55, 836
BfoI	RGCGCY	2 cut(s)	255, 1377
BglI	GCCNNNNNGGC	1 cut(s)	1512
BlpI	GCTNAGC	1 cut(s)	321
BmcAI	AGTACT	1 cut(s)	2323
Bme1390I	CCNGG	5 cut(s)	699, 911, 1054, 1304, 1935
Bme18I	GGWCC	3 cut(s)	130, 934, 1208
BmgT120I	GGNCC	9 cut(s)	130, 866, 934, 1112, 1208, 1277, 1504, 1609, 1696
BmiI	GGNNCC	6 cut(s)	131, 132, 868, 1375, 1639, 1697
BmrFI	CCNGG	5 cut(s)	699, 911, 1054, 1304, 1935
BmsI	GCATC	3 cut(s)	1474, 1765, 2326
BoxI	GACNNNNGTC	1 cut(s)	1226
BpiI	GAAGAC	1 cut(s)	1242
BpmI	CTGGAG	4 cut(s)	809, 1286, 2325, 2439
Bpu1102I	GCTNAGC	1 cut(s)	321
BpuMI	CCSGG	1 cut(s)	699
Bsa29I	ATCGAT	1 cut(s)	887
BsaAI	YACGTR	2 cut(s)	1465, 1493
BsaBI	GATNNNNATC	1 cut(s)	971
BsaHI	GRCGYC	1 cut(s)	1374
BsaJI	CCNNGG	5 cut(s)	384, 901, 1053, 1933, 2005
BsaWI	WCCGGW	1 cut(s)	1594
BsaXI	ACNNNNNCTCC	2 cut(s)	1312, 1342
Bsc4I	CCNNNNNNNGG	5 cut(s)	916, 1465, 1466, 1934, 2435
Bse1I	ACTGG	4 cut(s)	17, 40, 1653, 1848
Bse3DI	GCAATG	2 cut(s)	432, 811
Bse8I	GATNNNNATC	1 cut(s)	971
BseAI	TCCGGA	1 cut(s)	1594
BseBI	CCWGG	4 cut(s)	911, 1054, 1304, 1935
BseCI	ATCGAT	1 cut(s)	887
BseDI	CCNNGG	5 cut(s)	384, 901, 1053, 1933, 2005
BseGI	GGATG	2 cut(s)	1688, 2143
BseJI	GATNNNNATC	1 cut(s)	971
BseLI	CCNNNNNNNGG	5 cut(s)	916, 1465, 1466, 1934, 2435
BseMI	GCAATG	2 cut(s)	432, 811
BseMII	CTCAG	6 cut(s)	335, 759, 1191, 1245, 1911, 2228
BseNI	ACTGG	4 cut(s)	17, 40, 1653, 1848
BseRI	GAGGAG	3 cut(s)	2254, 2257, 2290
BseSI	GKGCMC	1 cut(s)	227
BseYI	CCCAGC	1 cut(s)	1279
BsgI	GTGCAG	4 cut(s)	56, 217, 1412, 2310
Bsh1236I	CGCG	1 cut(s)	168
BshFI	GGCC	8 cut(s)	383, 867, 1113, 1278, 1506, 1578, 1611, 1698
BshNI	GGYRCC	2 cut(s)	1373, 1637
BshVI	ATCGAT	1 cut(s)	887
BsiSI	CCGG	3 cut(s)	33, 699, 1595
BslFI	GGGAC	2 cut(s)	143, 587
BslI	CCNNNNNNNGG	5 cut(s)	916, 1465, 1466, 1934, 2435
BsmAI	GTCTC	4 cut(s)	643, 1234, 2042, 2260
BsmFI	GGGAC	2 cut(s)	143, 587
BsmI	GAATGC	1 cut(s)	2339
BsnI	GGCC	8 cut(s)	383, 867, 1113, 1278, 1506, 1578, 1611, 1698
Bsp1286I	GDGCHC	1 cut(s)	227
Bsp13I	TCCGGA	1 cut(s)	1594
Bsp1407I	TGTACA	1 cut(s)	1852
Bsp143I	GATC	6 cut(s)	419, 462, 966, 1213, 1603, 2308
Bsp1720I	GCTNAGC	1 cut(s)	321
BspACI	CCGC	5 cut(s)	106, 127, 1356, 1699, 1869
BspANI	GGCC	8 cut(s)	383, 867, 1113, 1278, 1506, 1578, 1611, 1698
BspCNI	CTCAG	6 cut(s)	334, 760, 1190, 1244, 1912, 2229
BspDI	ATCGAT	1 cut(s)	887
BspEI	TCCGGA	1 cut(s)	1594
BspFNI	CGCG	1 cut(s)	168
BspHI	TCATGA	1 cut(s)	975
BspLI	GGNNCC	6 cut(s)	131, 132, 868, 1375, 1639, 1697
BspMAI	CTGCAG	1 cut(s)	840
BspPI	GGATC	2 cut(s)	1611, 2303
BspQI	GCTCTTC	4 cut(s)	407, 473, 849, 2079
BspT107I	GGYRCC	2 cut(s)	1373, 1637
BsrDI	GCAATG	2 cut(s)	432, 811
BsrGI	TGTACA	1 cut(s)	1852
BsrI	ACTGG	4 cut(s)	17, 40, 1653, 1848
BssECI	CCNNGG	5 cut(s)	384, 901, 1053, 1933, 2005
BssMI	GATC	6 cut(s)	419, 462, 966, 1213, 1603, 2308
BssNI	GRCGYC	1 cut(s)	1374
BssT1I	CCWWGG	2 cut(s)	384, 901
Bst2UI	CCWGG	4 cut(s)	911, 1054, 1304, 1935
Bst4CI	ACNGT	8 cut(s)	222, 580, 757, 1108, 1339, 1501, 1992, 2006
Bst6I	CTCTTC	5 cut(s)	288, 407, 473, 849, 2079
BstACI	GRCGYC	1 cut(s)	1374
BstAPI	GCANNNNNTGC	2 cut(s)	124, 2114
BstAUI	TGTACA	1 cut(s)	1852
BstBAI	YACGTR	2 cut(s)	1465, 1493
BstC8I	GCNNGC	5 cut(s)	840, 1295, 1432, 1563, 1970
BstDSI	CCRYGG	1 cut(s)	2005
BstEII	GGTNACC	1 cut(s)	2403
BstF5I	GGATG	2 cut(s)	1688, 2143
BstFNI	CGCG	1 cut(s)	168
BstH2I	RGCGCY	2 cut(s)	255, 1377
BstHHI	GCGC	2 cut(s)	254, 1376
BstKTI	GATC	6 cut(s)	422, 465, 969, 1216, 1606, 2311
BstMAI	GTCTC	4 cut(s)	643, 1234, 2042, 2260
BstMBI	GATC	6 cut(s)	419, 462, 966, 1213, 1603, 2308
BstNI	CCWGG	4 cut(s)	911, 1054, 1304, 1935
BstNSI	RCATGY	3 cut(s)	475, 2016, 2396
BstPAI	GACNNNNGTC	1 cut(s)	1226
BstPI	GGTNACC	1 cut(s)	2403
BstSCI	CCNGG	5 cut(s)	697, 909, 1052, 1302, 1933
BstSFI	CTRYAG	2 cut(s)	55, 836
BstSLI	GKGCMC	1 cut(s)	227
BstUI	CGCG	1 cut(s)	168
BstV2I	GAAGAC	1 cut(s)	1242
BstX2I	RGATCY	2 cut(s)	1603, 2308
BstXI	CCANNNNNNTGG	1 cut(s)	1843
BstYI	RGATCY	2 cut(s)	1603, 2308
Bsu15I	ATCGAT	1 cut(s)	887
BsuRI	GGCC	8 cut(s)	383, 867, 1113, 1278, 1506, 1578, 1611, 1698
BsuTUI	ATCGAT	1 cut(s)	887
BtgI	CCRYGG	1 cut(s)	2005
BtsCI	GGATG	2 cut(s)	1688, 2143
BtsIMutI	CAGTG	4 cut(s)	227, 576, 1506, 1551
Cac8I	GCNNGC	5 cut(s)	840, 1295, 1432, 1563, 1970
CciI	TCATGA	1 cut(s)	975
CfoI	GCGC	2 cut(s)	254, 1376
Cfr13I	GGNCC	9 cut(s)	130, 866, 934, 1112, 1208, 1277, 1504, 1609, 1696
ClaI	ATCGAT	1 cut(s)	887
CsiI	ACCWGGT	1 cut(s)	909
Csp6I	GTAC	4 cut(s)	581, 1730, 1853, 2322
CviAII	CATG	7 cut(s)	460, 472, 976, 1959, 2013, 2348, 2393
CviQI	GTAC	4 cut(s)	581, 1730, 1853, 2322
DinI	GGCGCC	1 cut(s)	1375
DpnI	GATC	6 cut(s)	421, 464, 968, 1215, 1605, 2310
DpnII	GATC	6 cut(s)	419, 462, 966, 1213, 1603, 2308
Eam1104I	CTCTTC	5 cut(s)	288, 407, 473, 849, 2079
EarI	CTCTTC	5 cut(s)	288, 407, 473, 849, 2079
Eco130I	CCWWGG	2 cut(s)	384, 901
Eco47I	GGWCC	3 cut(s)	130, 934, 1208
Eco47III	AGCGCT	1 cut(s)	253
Eco57I	CTGAAG	1 cut(s)	797
Eco72I	CACGTG	1 cut(s)	1465
Eco91I	GGTNACC	1 cut(s)	2403
EcoO109I	RGGNCCY	2 cut(s)	130, 866
EcoO65I	GGTNACC	1 cut(s)	2403
EcoRI	GAATTC	1 cut(s)	349
EcoRII	CCWGG	4 cut(s)	909, 1052, 1302, 1933
EcoT14I	CCWWGG	2 cut(s)	384, 901
EcoT22I	ATGCAT	1 cut(s)	2341
EgeI	GGCGCC	1 cut(s)	1375
EheI	GGCGCC	1 cut(s)	1375
ErhI	CCWWGG	2 cut(s)	384, 901
FaeI	CATG	7 cut(s)	463, 475, 979, 1962, 2016, 2351, 2396
FalI	AAGNNNNNCTT	2 cut(s)	2097, 2129
FaqI	GGGAC	2 cut(s)	143, 587
FatI	CATG	7 cut(s)	459, 471, 975, 1958, 2012, 2347, 2392
FauI	CCCGC	1 cut(s)	120
FbaI	TGATCA	3 cut(s)	462, 966, 1213
FblI	GTMKAC	2 cut(s)	832, 2126
FokI	GGATG	2 cut(s)	1695, 2150
FspBI	CTAG	8 cut(s)	306, 1226, 1478, 1628, 1718, 1739, 2204, 2216
GlaI	GCGC	2 cut(s)	253, 1375
GsaI	CCCAGC	1 cut(s)	1283
GsuI	CTGGAG	4 cut(s)	809, 1286, 2325, 2439
HaeII	RGCGCY	2 cut(s)	255, 1377
HaeIII	GGCC	8 cut(s)	383, 867, 1113, 1278, 1506, 1578, 1611, 1698
HapII	CCGG	3 cut(s)	33, 699, 1595
HhaI	GCGC	2 cut(s)	254, 1376
Hin1I	GRCGYC	1 cut(s)	1374
Hin1II	CATG	7 cut(s)	463, 475, 979, 1962, 2016, 2351, 2396
Hin6I	GCGC	2 cut(s)	252, 1374
HinP1I	GCGC	2 cut(s)	252, 1374
HincII	GTYRAC	1 cut(s)	2398
HindII	GTYRAC	1 cut(s)	2398
HindIII	AAGCTT	1 cut(s)	1295
HpaII	CCGG	3 cut(s)	33, 699, 1595
HphI	GGTGA	3 cut(s)	1208, 1994, 2363
Hpy166II	GTNNAC	5 cut(s)	833, 1246, 2059, 2127, 2398
Hpy8I	GTNNAC	5 cut(s)	833, 1246, 2059, 2127, 2398
HpyAV	CCTTC	7 cut(s)	204, 857, 1628, 1651, 1715, 2039, 2089
HpyCH4III	ACNGT	8 cut(s)	222, 580, 757, 1108, 1339, 1501, 1992, 2006
HpyCH4IV	ACGT	3 cut(s)	1464, 1492, 2380
HpySE526I	ACGT	3 cut(s)	1464, 1492, 2380
Hsp92I	GRCGYC	1 cut(s)	1374
Hsp92II	CATG	7 cut(s)	463, 475, 979, 1962, 2016, 2351, 2396
HspAI	GCGC	2 cut(s)	252, 1374
KasI	GGCGCC	1 cut(s)	1373
KflI	GGGWCCC	1 cut(s)	130
Kpn2I	TCCGGA	1 cut(s)	1594
Ksp22I	TGATCA	3 cut(s)	462, 966, 1213
Kzo9I	GATC	6 cut(s)	419, 462, 966, 1213, 1603, 2308
LguI	GCTCTTC	4 cut(s)	407, 473, 849, 2079
LmnI	GCTCC	2 cut(s)	701, 1411
LweI	GCATC	3 cut(s)	1474, 1765, 2326
MabI	ACCWGGT	1 cut(s)	909
MaeI	CTAG	8 cut(s)	306, 1226, 1478, 1628, 1718, 1739, 2204, 2216
MaeII	ACGT	3 cut(s)	1464, 1492, 2380
MaeIII	GTNAC	6 cut(s)	136, 1705, 1747, 2211, 2351, 2403
MalI	GATC	6 cut(s)	421, 464, 968, 1215, 1605, 2310
MboI	GATC	6 cut(s)	419, 462, 966, 1213, 1603, 2308
MboII	GAAGA	9 cut(s)	305, 377, 424, 490, 694, 836, 1247, 1820, 2066
MfeI	CAATTG	1 cut(s)	174
MflI	RGATCY	2 cut(s)	1603, 2308
MhlI	GDGCHC	1 cut(s)	227
Mly113I	GGCGCC	1 cut(s)	1374
MlyI	GAGTC	5 cut(s)	23, 1128, 1216, 1311, 2199
MmeI	TCCRAC	5 cut(s)	700, 1186, 1294, 1669, 2115
Mph1103I	ATGCAT	1 cut(s)	2341
MroI	TCCGGA	1 cut(s)	1594
MseI	TTAA	7 cut(s)	110, 245, 1262, 1362, 1437, 1668, 1800
MslI	CAYNNNNRTG	2 cut(s)	470, 2088
MspI	CCGG	3 cut(s)	33, 699, 1595
MspR9I	CCNGG	5 cut(s)	699, 911, 1054, 1304, 1935
MunI	CAATTG	1 cut(s)	174
Mva1269I	GAATGC	1 cut(s)	2339
MvaI	CCWGG	4 cut(s)	911, 1054, 1304, 1935
MvnI	CGCG	1 cut(s)	168
NarI	GGCGCC	1 cut(s)	1374
NciI	CCSGG	1 cut(s)	699
NdeII	GATC	6 cut(s)	419, 462, 966, 1213, 1603, 2308
NlaIII	CATG	7 cut(s)	463, 475, 979, 1962, 2016, 2351, 2396
NlaIV	GGNNCC	6 cut(s)	131, 132, 868, 1375, 1639, 1697
NmeAIII	GCCGAG	1 cut(s)	291
NmuCI	GTSAC	2 cut(s)	1705, 2351
NsiI	ATGCAT	1 cut(s)	2341
NspI	RCATGY	3 cut(s)	475, 2016, 2396
PagI	TCATGA	1 cut(s)	975
PciI	ACATGT	1 cut(s)	471
PciSI	GCTCTTC	4 cut(s)	407, 473, 849, 2079
PcsI	WCGNNNNNNNCGW	1 cut(s)	2002
PctI	GAATGC	1 cut(s)	2339
PfeI	GAWTC	6 cut(s)	92, 542, 784, 1193, 1895, 2233
PflFI	GACNNNGTC	2 cut(s)	1241, 1992
PfoI	TCCNGGA	1 cut(s)	697
PleI	GAGTC	5 cut(s)	23, 1128, 1216, 1311, 2198
PluTI	GGCGCC	1 cut(s)	1377
PmaCI	CACGTG	1 cut(s)	1465
PmlI	CACGTG	1 cut(s)	1465
PpsI	GAGTC	5 cut(s)	23, 1128, 1216, 1311, 2198
Ppu21I	YACGTR	2 cut(s)	1465, 1493
PpuMI	RGGWCCY	1 cut(s)	130
PscI	ACATGT	1 cut(s)	471
PshAI	GACNNNNGTC	1 cut(s)	1226
Psp5II	RGGWCCY	1 cut(s)	130
Psp6I	CCWGG	4 cut(s)	909, 1052, 1302, 1933
PspCI	CACGTG	1 cut(s)	1465
PspEI	GGTNACC	1 cut(s)	2403
PspFI	CCCAGC	1 cut(s)	1279
PspGI	CCWGG	4 cut(s)	909, 1052, 1302, 1933
PspN4I	GGNNCC	6 cut(s)	131, 132, 868, 1375, 1639, 1697
PspPI	GGNCC	9 cut(s)	130, 866, 934, 1112, 1208, 1277, 1504, 1609, 1696
PspPPI	RGGWCCY	1 cut(s)	130
PstI	CTGCAG	1 cut(s)	840
PsuI	RGATCY	2 cut(s)	1603, 2308
PsyI	GACNNNGTC	2 cut(s)	1241, 1992
RsaI	GTAC	4 cut(s)	582, 1731, 1854, 2323
RsaNI	GTAC	4 cut(s)	581, 1730, 1853, 2322
RseI	CAYNNNNRTG	2 cut(s)	470, 2088
SapI	GCTCTTC	4 cut(s)	407, 473, 849, 2079
SaqAI	TTAA	7 cut(s)	110, 245, 1262, 1362, 1437, 1668, 1800
Sau3AI	GATC	6 cut(s)	419, 462, 966, 1213, 1603, 2308
Sau96I	GGNCC	9 cut(s)	130, 866, 934, 1112, 1208, 1277, 1504, 1609, 1696
ScaI	AGTACT	1 cut(s)	2323
SchI	GAGTC	5 cut(s)	23, 1128, 1216, 1311, 2199
ScrFI	CCNGG	5 cut(s)	699, 911, 1054, 1304, 1935
SduI	GDGCHC	1 cut(s)	227
SexAI	ACCWGGT	1 cut(s)	909
SfaNI	GCATC	3 cut(s)	1474, 1765, 2326
SfcI	CTRYAG	2 cut(s)	55, 836
SfoI	GGCGCC	1 cut(s)	1375
SinI	GGWCC	3 cut(s)	130, 934, 1208
SmiMI	CAYNNNNRTG	2 cut(s)	470, 2088
SsiI	CCGC	5 cut(s)	106, 127, 1356, 1699, 1869
SspDI	GGCGCC	1 cut(s)	1373
SspI	AATATT	3 cut(s)	561, 1168, 1543
SspMI	CTAG	8 cut(s)	306, 1226, 1478, 1628, 1718, 1739, 2204, 2216
StyD4I	CCNGG	5 cut(s)	697, 909, 1052, 1302, 1933
StyI	CCWWGG	2 cut(s)	384, 901
TaaI	ACNGT	8 cut(s)	222, 580, 757, 1108, 1339, 1501, 1992, 2006
TaiI	ACGT	3 cut(s)	1467, 1495, 2383
TaqI	TCGA	4 cut(s)	353, 887, 1287, 2359
TatI	WGTACW	2 cut(s)	1852, 2321
TauI	GCSGC	4 cut(s)	108, 1358, 1701, 1871
TfiI	GAWTC	6 cut(s)	92, 542, 784, 1193, 1895, 2233
Tru1I	TTAA	7 cut(s)	110, 245, 1262, 1362, 1437, 1668, 1800
Tru9I	TTAA	7 cut(s)	110, 245, 1262, 1362, 1437, 1668, 1800
TscAI	CASTG	4 cut(s)	227, 583, 1506, 1558
TseFI	GTSAC	2 cut(s)	1705, 2351
Tsp45I	GTSAC	2 cut(s)	1705, 2351
TspDTI	ATGAA	8 cut(s)	84, 327, 666, 948, 1023, 1647, 1807, 2310
TspGWI	ACGGA	1 cut(s)	2239
TspRI	CASTG	4 cut(s)	227, 583, 1506, 1558
Tth111I	GACNNNGTC	2 cut(s)	1241, 1992
VpaK11BI	GGWCC	3 cut(s)	130, 934, 1208
XapI	RAATTY	5 cut(s)	214, 349, 855, 1029, 1903
XbaI	TCTAGA	2 cut(s)	1717, 2203
XceI	RCATGY	3 cut(s)	475, 2016, 2396
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1310, 1384
XmiI	GTMKAC	2 cut(s)	832, 2126
XspI	CTAG	8 cut(s)	306, 1226, 1478, 1628, 1718, 1739, 2204, 2216
ZrmI	AGTACT	1 cut(s)	2323
Zsp2I	ATGCAT	1 cut(s)	2341

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.