Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0008636

Physical Location & Seq

Genomic Coordinates Reverse (-)

576182 .. 579021

Gene Structure 2840 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g00630.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2196 bp

ATGCGTGATCCTTTTACCTTAGAAAACGGTCAAACATTTGAGCGAGAAGCAATTGAAAAGTGGTTTAGGGAATGCAAGGAGAGTGGAAGGAAGTTGGTCTGCCCACTGACACTAAAAGAATTGAAAAGCGCTGATCTAAAGCCTAGCATAGCTTTGAGGAACACCATTGAAGAGTGGAATGCCAGAAATGAAGCTGCTCAGCTTGATATGGCTCGTAAGTCATTGAATCTGGGCAGCTCAGAAAGTGAAGTTCTTTTGGCCTTGAAGTTTGTCCAGCAAATCTGCCAAAAAACAAGATCAAATAAGCACGTTGCACGCAATGCAGGGCTGATTCCTATGATAGTTGACATGTTGAAGAGCAGTCGTAAAGTAAGGTGCAAAGCTTTGGAAACCCTTAAAACTGTGGTGGAGGATGATTCCGATAATAAGGAATTATTGGCTGATGGGGATACAGTACGAACTATAGTGAAGTTCTTGTATCACGAGCAATCCAAAGAGAGGGAGAAAGCTGTCTCTTTGCTGTATGAACTATCCAAATCTGAAGCCTTATGTGAGAAGATTGGTTCAATTAATGGAGCGATTCTTATTTTGGTTGGAATGACAAGCAGCAAATCAGATAACATTTTGACTGTTGAGAACGCTGATAAAACATTACAGAATCTGGAGAAGTGTGAGAACAATGTGAGACAGATGGCTGAAAATGGTAGACTGCAGCCTCTTCTGACACAAATTCGTGAAGGCCCTCCAGAAACCCAACTTTCGATGTCTAATTTCCTTGGTGAGTTAGTTTTGGACAATGATGTAAAGGTGATAGTGGCTAAAAGTGTGGGTTCAGCTTTGATTAACATCATGAGAAGTGGTGATATGCAGTCAAGAGAAGCAGCTTTGAAAGCTCTCAACCAAATTTCATCTTGTGAGGCAAGTGCCAAGGTACTGATAGAGGCAGGAATACTTCCGTCTCTGGTCAAAGATCTCTTTATCGTTGGGGCTAACCAGCTTCCTATGCGACTGAAAGAGGTTGCTGCAACAATTCTTGCTAATGTTGTTAGCACAGACTATGATTTTGATTCCATCTTGGTTGGACCTGATCAGCAAACGCTAGTCTCAGAAGACATTGTCCATAACCTACTACATCTCATTAGCAACACTGGACCAGCAATCGAGAGCAAGCTTCTCCAGGTTCTTGTTGGACTCACTAGCTCTCCTTCAACTGTTTTGAGTGTTGTTGCCGCCATTAAAAGCTCCGGTGCCATTATTAGTTTGGTGCAGTTTATTGAGGCTCCACAAAAGGAATTACGTGTGGCTTCCATTAAACTTCTCCAGAACCTCTCCCCACATGTGGGCCAGGAGCTAGCTGACGCCCTACGTGGCACAGTGGGCCAACTTGGAAGCCTAATAAAAGTCATATCAGAGAATATTTCAATCACTGAAGAGCAATCAGCAGCCATTGGCATCTTAGCTGAACTTCCGGAGAGGGATCTAGGCCTTGCCAGGCAGATGCTAGATGACGGTGCCTTTGAGCTGGTACATTCTAGAGTAGTTAAGATCCGCCAAGGGGGGAGTAAGGGTGGCCGCTTTGTGACACCATTTCTAGAAGGACTTGTACGAGTTTTAGCAAGGGTTACACTTGTGTTGGCTGATGAGCAAGGTGCAGTTTCTCTGTGCCGTGAACTTAATCTTGCTGCACTTTTCATTGAACTTCTACAGGCCAACGGACTGGAGAATGTACAGATGAGTTCAGCAGCAGCATTAGAGAATTTATCACAAGAATCCAAAAATTTGACAAGATTGCCCGAGTTGCCTACACCTGGTTTCTGTGCTTCAGTTTTTTCATGTTTTAGTAAACCACCTGCCATAAATGGTTTGTGTCGGCTTCATCGTGGGACATGTTCACTTAGAGATAGTTTTTGTCTCTTGGAGGGACATGCTGTGGAAAAGTTGGTAGCTCTTCTCGACCATACAAACGAGAAGGTGGTCGAAGCAGCACTTGCAGCACTCTCTACTCTGTTGGATGATGGGCTTGATATCGAACAAGGGGTTATGGTGTTGTGTGAGGCAGAGGGGGTGAAGCCTATTCTTGACGTGTTGTTAGAGAAACGGACAGAGAATCTGAGGAGGAGGGCAGTCTGGGTAGTTGAAAGACTATTGCGGAGTGATGAGATAGCCTATGAAGTTTCTGGATCGATCCGAACGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006807 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009889 GO:0009890 GO:0009892 GO:0009894 GO:0009987 GO:0010115 GO:0010150 GO:0010271 GO:0010380 GO:0010565 GO:0016020 GO:0016567 GO:0016740 GO:0019216 GO:0019222 GO:0019538 GO:0019747 GO:0019787 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031329 GO:0032446 GO:0032501 GO:0032502 GO:0033612 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043455 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045827 GO:0045833 GO:0046890 GO:0048366 GO:0048367 GO:0048519 GO:0048523 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051055 GO:0051171 GO:0051193 GO:0062012 GO:0062014 GO:0065007 GO:0070647 GO:0070696 GO:0071704 GO:0071944 GO:0080090 GO:0090056 GO:0090359 GO:0090693 GO:0099402 GO:0140096 GO:1901401 GO:1901404 GO:1901463 GO:1901564 GO:1902930 GO:1902931

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

732

Amino Acids

79.81

Weight (kDa)

5.5

Isoelectric Point (pI)

40.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U-box	PF04564	1 - 64	5e-09	U-box domain
ARM_ARMC5	PF24768	73 - 246	9.5e-07	ARMC5
ARM_PUB	PF25598	74 - 187	2.2e-06	Plant U-box protein ARM repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008636)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20780 AT1G20780 AT1G20780 AT1G76390 AT1G76390
fragaria_vesca	FvH4_5g25630 FvH4_5g25630
malus_domestica	MD00G1113800.v1.1 MD06G1007200.v1.1
prunus_persica	Prupe.5G009100_v2.0.a1 Prupe.5G009100_v2.0.a1
pyrus_communis	pycom06g00630 pycom16g26080
rosa_chinensis	RchiOBHm_Chr7g0215921
rosa_laevigata	RLG00000002607
rosa_multiflora	Rmu_sc0006240.1_g000004
rosa_roxburghii	Rroxscaffold_3G00243800
rosa_rugosa	Rorug07G0156800
rosa_samantha	Rh7AG294900 Rh7BG286900 Rh7CG315000 Rh7DG297700
rosa_wichuraiana	Rw7G025050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1858
Acc36I	ACCTGC	1 cut(s)	1858
AccB1I	GGYRCC	2 cut(s)	1247, 1511
AccI	GTMKAC	1 cut(s)	706
AccIII	TCCGGA	1 cut(s)	1468
AciI	CCGC	4 cut(s)	1230, 1549, 1573, 2149
AclWI	GGATC	5 cut(s)	2, 1485, 1540, 2179, 2188
AcoI	YGGCCR	1 cut(s)	1570
AcsI	RAATTY	4 cut(s)	729, 903, 1756, 1777
AcuI	CTGAAG	3 cut(s)	561, 1449, 1806
AcyI	GRCGYC	1 cut(s)	1359
AfaI	GTAC	5 cut(s)	456, 933, 1527, 1605, 1728
AfeI	AGCGCT	1 cut(s)	130
AfiI	CCNNNNNNNGG	5 cut(s)	498, 1339, 1340, 1555, 1808
AflIII	ACRYGT	5 cut(s)	348, 1297, 1336, 1886, 2082
AjiI	CACGTC	1 cut(s)	2083
AjnI	CCWGG	4 cut(s)	1176, 1344, 1490, 1807
Alw26I	GTCTC	5 cut(s)	517, 679, 963, 1108, 1916
AlwI	GGATC	5 cut(s)	2, 1485, 1540, 2179, 2188
AlwNI	CAGNNNCTG	1 cut(s)	661
Ama87I	CYCGRG	1 cut(s)	1793
Aor13HI	TCCGGA	1 cut(s)	1468
Aor51HI	AGCGCT	1 cut(s)	130
AoxI	GGCC	7 cut(s)	258, 739, 1342, 1378, 1483, 1570, 1707
ApoI	RAATTY	4 cut(s)	729, 903, 1756, 1777
ArsI	GACNNNNNNTTYG	4 cut(s)	1046, 1078, 1499, 1531
AseI	ATTAAT	1 cut(s)	570
AspLEI	GCGC	1 cut(s)	131
AspS9I	GGNCC	5 cut(s)	740, 1082, 1151, 1342, 1378
AsuHPI	GGTGA	4 cut(s)	791, 820, 872, 2077
AsuNHI	GCTAGC	1 cut(s)	1351
AvaI	CYCGRG	1 cut(s)	1793
AvaII	GGWCC	2 cut(s)	1082, 1151
BanI	GGYRCC	2 cut(s)	1247, 1511
BarI	GAAGNNNNNNTAC	2 cut(s)	1587, 1619
BauI	CACGAG	1 cut(s)	482
BbsI	GAAGAC	1 cut(s)	1116
BccI	CCATC	4 cut(s)	437, 685, 1079, 2009
BceAI	ACGGC	1 cut(s)	1650
BciT130I	CCWGG	4 cut(s)	1178, 1346, 1492, 1809
BciVI	GTATCC	1 cut(s)	442
BclI	TGATCA	1 cut(s)	1087
BcoDI	GTCTC	5 cut(s)	517, 679, 963, 1108, 1916
BfaI	CTAG	8 cut(s)	144, 1100, 1197, 1352, 1481, 1502, 1533, 1592
BfmI	CTRYAG	3 cut(s)	462, 710, 1703
BfoI	RGCGCY	1 cut(s)	132
BfuAI	ACCTGC	1 cut(s)	1858
BfuI	GTATCC	1 cut(s)	442
BglII	AGATCT	1 cut(s)	970
BlpI	GCTNAGC	1 cut(s)	198
Bme1390I	CCNGG	4 cut(s)	1178, 1346, 1492, 1809
Bme18I	GGWCC	2 cut(s)	1082, 1151
BmeT110I	CYCGRG	1 cut(s)	1793
BmgBI	CACGTC	1 cut(s)	2083
BmgT120I	GGNCC	5 cut(s)	740, 1082, 1151, 1342, 1378
BmiI	GGNNCC	3 cut(s)	1249, 1281, 1513
BmrFI	CCNGG	4 cut(s)	1178, 1346, 1492, 1809
BmsI	GCATC	2 cut(s)	1461, 1488
BmtI	GCTAGC	1 cut(s)	1355
BpiI	GAAGAC	1 cut(s)	1116
BpmI	CTGGAG	5 cut(s)	683, 729, 1160, 1304, 1739
Bpu1102I	GCTNAGC	1 cut(s)	198
Bsa29I	ATCGAT	1 cut(s)	2183
BsaAI	YACGTR	2 cut(s)	1298, 1367
BsaBI	GATNNNNATC	1 cut(s)	845
BsaHI	GRCGYC	1 cut(s)	1359
BsaJI	CCNNGG	3 cut(s)	775, 927, 1552
BsaWI	WCCGGW	2 cut(s)	1244, 1468
BsaXI	ACNNNNNCTCC	4 cut(s)	1186, 1216, 1552, 1582
Bsc4I	CCNNNNNNNGG	5 cut(s)	498, 1339, 1340, 1555, 1808
Bse1I	ACTGG	2 cut(s)	1153, 1722
Bse3DI	GCAATG	1 cut(s)	325
Bse8I	GATNNNNATC	1 cut(s)	845
BseAI	TCCGGA	1 cut(s)	1468
BseBI	CCWGG	4 cut(s)	1178, 1346, 1492, 1809
BseCI	ATCGAT	1 cut(s)	2183
BseDI	CCNNGG	3 cut(s)	775, 927, 1552
BseGI	GGATG	2 cut(s)	418, 2017
BseJI	GATNNNNATC	1 cut(s)	845
BseLI	CCNNNNNNNGG	5 cut(s)	498, 1339, 1340, 1555, 1808
BseMI	GCAATG	1 cut(s)	325
BseMII	CTCAG	4 cut(s)	212, 252, 1119, 2102
BseNI	ACTGG	2 cut(s)	1153, 1722
BseRI	GAGGAG	2 cut(s)	2128, 2131
BsgI	GTGCAG	3 cut(s)	1286, 1668, 1671
BshFI	GGCC	7 cut(s)	260, 741, 1344, 1380, 1485, 1572, 1709
BshNI	GGYRCC	2 cut(s)	1247, 1511
BshVI	ATCGAT	1 cut(s)	2183
BsiHKCI	CYCGRG	1 cut(s)	1793
BsiSI	CCGG	2 cut(s)	1245, 1469
BslFI	GGGAC	2 cut(s)	1897, 1935
BslI	CCNNNNNNNGG	5 cut(s)	498, 1339, 1340, 1555, 1808
BsmAI	GTCTC	5 cut(s)	517, 679, 963, 1108, 1916
BsmBI	CGTCTC	1 cut(s)	963
BsmFI	GGGAC	2 cut(s)	1897, 1935
BsmI	GAATGC	2 cut(s)	77, 184
BsnI	GGCC	7 cut(s)	260, 741, 1344, 1380, 1485, 1572, 1709
BsoBI	CYCGRG	1 cut(s)	1793
Bsp13I	TCCGGA	1 cut(s)	1468
Bsp1407I	TGTACA	1 cut(s)	1726
Bsp143I	GATC	9 cut(s)	7, 133, 296, 970, 1087, 1477, 1545, 2180, 2184
Bsp1720I	GCTNAGC	1 cut(s)	198
BspACI	CCGC	4 cut(s)	1230, 1549, 1573, 2149
BspANI	GGCC	7 cut(s)	260, 741, 1344, 1380, 1485, 1572, 1709
BspCNI	CTCAG	4 cut(s)	211, 251, 1118, 2103
BspDI	ATCGAT	1 cut(s)	2183
BspEI	TCCGGA	1 cut(s)	1468
BspHI	TCATGA	1 cut(s)	849
BspLI	GGNNCC	3 cut(s)	1249, 1281, 1513
BspMAI	CTGCAG	1 cut(s)	714
BspMI	ACCTGC	1 cut(s)	1858
BspOI	GCTAGC	1 cut(s)	1355
BspPI	GGATC	5 cut(s)	2, 1485, 1540, 2179, 2188
BspQI	GCTCTTC	3 cut(s)	350, 1425, 1953
BspT107I	GGYRCC	2 cut(s)	1247, 1511
BsrDI	GCAATG	1 cut(s)	325
BsrGI	TGTACA	1 cut(s)	1726
BsrI	ACTGG	2 cut(s)	1153, 1722
BssECI	CCNNGG	3 cut(s)	775, 927, 1552
BssMI	GATC	9 cut(s)	7, 133, 296, 970, 1087, 1477, 1545, 2180, 2184
BssNI	GRCGYC	1 cut(s)	1359
BssSI	CACGAG	1 cut(s)	482
BssT1I	CCWWGG	3 cut(s)	775, 927, 1552
Bst2BI	CACGAG	1 cut(s)	482
Bst2UI	CCWGG	4 cut(s)	1178, 1346, 1492, 1809
Bst4CI	ACNGT	7 cut(s)	29, 403, 454, 631, 1213, 1375, 1511
Bst6I	CTCTTC	5 cut(s)	165, 350, 723, 1425, 1953
BstACI	GRCGYC	1 cut(s)	1359
BstAPI	GCANNNNNTGC	2 cut(s)	320, 1988
BstAUI	TGTACA	1 cut(s)	1726
BstBAI	YACGTR	2 cut(s)	1298, 1367
BstC8I	GCNNGC	3 cut(s)	316, 1169, 1353
BstDEI	CTNAG	7 cut(s)	19, 198, 238, 1105, 1456, 1895, 2111
BstF5I	GGATG	2 cut(s)	418, 2017
BstH2I	RGCGCY	1 cut(s)	132
BstHHI	GCGC	1 cut(s)	131
BstKTI	GATC	9 cut(s)	10, 136, 299, 973, 1090, 1480, 1548, 2183, 2187
BstMAI	GTCTC	5 cut(s)	517, 679, 963, 1108, 1916
BstMBI	GATC	9 cut(s)	7, 133, 296, 970, 1087, 1477, 1545, 2180, 2184
BstMWI	GCNNNNNNNGC	7 cut(s)	320, 890, 1003, 1377, 1798, 1988, 1991
BstNI	CCWGG	4 cut(s)	1178, 1346, 1492, 1809
BstNSI	RCATGY	4 cut(s)	352, 1340, 1890, 1928
BstSCI	CCNGG	4 cut(s)	1176, 1344, 1490, 1807
BstSFI	CTRYAG	3 cut(s)	462, 710, 1703
BstV2I	GAAGAC	1 cut(s)	1116
BstX2I	RGATCY	3 cut(s)	970, 1477, 1545
BstXI	CCANNNNNNTGG	1 cut(s)	1717
BstYI	RGATCY	3 cut(s)	970, 1477, 1545
Bsu15I	ATCGAT	1 cut(s)	2183
BsuI	GTATCC	1 cut(s)	442
BsuRI	GGCC	7 cut(s)	260, 741, 1344, 1380, 1485, 1572, 1709
BsuTUI	ATCGAT	1 cut(s)	2183
BtrI	CACGTC	1 cut(s)	2083
BtsCI	GGATG	2 cut(s)	418, 2017
BtsIMutI	CAGTG	4 cut(s)	104, 1146, 1380, 1425
BveI	ACCTGC	1 cut(s)	1858
Cac8I	GCNNGC	3 cut(s)	316, 1169, 1353
CaiI	CAGNNNCTG	1 cut(s)	661
CciI	TCATGA	1 cut(s)	849
CfoI	GCGC	1 cut(s)	131
Cfr13I	GGNCC	5 cut(s)	740, 1082, 1151, 1342, 1378
ClaI	ATCGAT	1 cut(s)	2183
CseI	GACGC	1 cut(s)	1367
CsiI	ACCWGGT	1 cut(s)	1807
Csp6I	GTAC	5 cut(s)	455, 932, 1526, 1604, 1727
CspCI	CAANNNNNGTGG	2 cut(s)	64, 99
CviAII	CATG	6 cut(s)	349, 850, 1337, 1833, 1887, 1925
CviQI	GTAC	5 cut(s)	455, 932, 1526, 1604, 1727
DdeI	CTNAG	7 cut(s)	19, 198, 238, 1105, 1456, 1895, 2111
DpnI	GATC	9 cut(s)	9, 135, 298, 972, 1089, 1479, 1547, 2182, 2186
DpnII	GATC	9 cut(s)	7, 133, 296, 970, 1087, 1477, 1545, 2180, 2184
EaeI	YGGCCR	1 cut(s)	1570
Eam1104I	CTCTTC	5 cut(s)	165, 350, 723, 1425, 1953
EarI	CTCTTC	5 cut(s)	165, 350, 723, 1425, 1953
EciI	GGCGGA	1 cut(s)	1538
Eco130I	CCWWGG	3 cut(s)	775, 927, 1552
Eco147I	AGGCCT	1 cut(s)	1485
Eco32I	GATATC	1 cut(s)	2026
Eco47I	GGWCC	2 cut(s)	1082, 1151
Eco47III	AGCGCT	1 cut(s)	130
Eco57I	CTGAAG	3 cut(s)	561, 1449, 1806
Eco88I	CYCGRG	1 cut(s)	1793
EcoO109I	RGGNCCY	1 cut(s)	740
EcoRII	CCWGG	4 cut(s)	1176, 1344, 1490, 1807
EcoRV	GATATC	1 cut(s)	2026
EcoT14I	CCWWGG	3 cut(s)	775, 927, 1552
ErhI	CCWWGG	3 cut(s)	775, 927, 1552
Esp3I	CGTCTC	1 cut(s)	963
FaeI	CATG	6 cut(s)	352, 853, 1340, 1836, 1890, 1928
FalI	AAGNNNNNCTT	2 cut(s)	1971, 2003
FaqI	GGGAC	2 cut(s)	1897, 1935
FatI	CATG	6 cut(s)	348, 849, 1336, 1832, 1886, 1924
FbaI	TGATCA	1 cut(s)	1087
FblI	GTMKAC	1 cut(s)	706
FokI	GGATG	2 cut(s)	425, 2024
FspBI	CTAG	8 cut(s)	144, 1100, 1197, 1352, 1481, 1502, 1533, 1592
GlaI	GCGC	1 cut(s)	130
GsuI	CTGGAG	5 cut(s)	683, 729, 1160, 1304, 1739
HaeII	RGCGCY	1 cut(s)	132
HaeIII	GGCC	7 cut(s)	260, 741, 1344, 1380, 1485, 1572, 1709
HapII	CCGG	2 cut(s)	1245, 1469
HgaI	GACGC	1 cut(s)	1367
HhaI	GCGC	1 cut(s)	131
Hin1I	GRCGYC	1 cut(s)	1359
Hin1II	CATG	6 cut(s)	352, 853, 1340, 1836, 1890, 1928
Hin6I	GCGC	1 cut(s)	129
HinP1I	GCGC	1 cut(s)	129
HincII	GTYRAC	1 cut(s)	346
HindII	GTYRAC	1 cut(s)	346
HindIII	AAGCTT	2 cut(s)	381, 1169
HinfI	GANTC	9 cut(s)	226, 331, 416, 580, 658, 1067, 1191, 1769, 2107
HpaII	CCGG	2 cut(s)	1245, 1469
HphI	GGTGA	4 cut(s)	791, 820, 872, 2077
Hpy166II	GTNNAC	5 cut(s)	346, 707, 1670, 1844, 1892
Hpy188I	TCNGA	9 cut(s)	241, 421, 541, 616, 723, 1108, 1411, 2112, 2189
Hpy8I	GTNNAC	5 cut(s)	346, 707, 1670, 1844, 1892
HpyAV	CCTTC	5 cut(s)	81, 731, 1215, 1589, 1963
HpyCH4III	ACNGT	7 cut(s)	29, 403, 454, 631, 1213, 1375, 1511
HpyCH4IV	ACGT	5 cut(s)	309, 1297, 1366, 2082, 2192
HpyF10VI	GCNNNNNNNGC	7 cut(s)	320, 890, 1003, 1377, 1798, 1988, 1991
HpyF3I	CTNAG	7 cut(s)	19, 198, 238, 1105, 1456, 1895, 2111
HpySE526I	ACGT	5 cut(s)	309, 1297, 1366, 2082, 2192
Hsp92I	GRCGYC	1 cut(s)	1359
Hsp92II	CATG	6 cut(s)	352, 853, 1340, 1836, 1890, 1928
HspAI	GCGC	1 cut(s)	129
Kpn2I	TCCGGA	1 cut(s)	1468
Ksp22I	TGATCA	1 cut(s)	1087
Kzo9I	GATC	9 cut(s)	7, 133, 296, 970, 1087, 1477, 1545, 2180, 2184
LguI	GCTCTTC	3 cut(s)	350, 1425, 1953
LmnI	GCTCC	4 cut(s)	575, 1247, 1285, 1348
LweI	GCATC	2 cut(s)	1461, 1488
MabI	ACCWGGT	1 cut(s)	1807
MaeI	CTAG	8 cut(s)	144, 1100, 1197, 1352, 1481, 1502, 1533, 1592
MaeII	ACGT	5 cut(s)	309, 1297, 1366, 2082, 2192
MaeIII	GTNAC	2 cut(s)	1579, 1621
MalI	GATC	9 cut(s)	9, 135, 298, 972, 1089, 1479, 1547, 2182, 2186
MboI	GATC	9 cut(s)	7, 133, 296, 970, 1087, 1477, 1545, 2180, 2184
MboII	GAAGA	7 cut(s)	182, 367, 568, 710, 1121, 1442, 1940
MfeI	CAATTG	1 cut(s)	51
MflI	RGATCY	3 cut(s)	970, 1477, 1545
MlyI	GAGTC	1 cut(s)	1185
MmeI	TCCRAC	4 cut(s)	574, 1060, 1168, 1989
MroI	TCCGGA	1 cut(s)	1468
MseI	TTAA	7 cut(s)	396, 570, 843, 1236, 1311, 1542, 1674
MspI	CCGG	2 cut(s)	1245, 1469
MspR9I	CCNGG	4 cut(s)	1178, 1346, 1492, 1809
MunI	CAATTG	1 cut(s)	51
Mva1269I	GAATGC	2 cut(s)	77, 184
MvaI	CCWGG	4 cut(s)	1178, 1346, 1492, 1809
MwoI	GCNNNNNNNGC	7 cut(s)	320, 890, 1003, 1377, 1798, 1988, 1991
NdeII	GATC	9 cut(s)	7, 133, 296, 970, 1087, 1477, 1545, 2180, 2184
NheI	GCTAGC	1 cut(s)	1351
NlaIII	CATG	6 cut(s)	352, 853, 1340, 1836, 1890, 1928
NlaIV	GGNNCC	3 cut(s)	1249, 1281, 1513
NmuCI	GTSAC	1 cut(s)	1579
NspI	RCATGY	4 cut(s)	352, 1340, 1890, 1928
PagI	TCATGA	1 cut(s)	849
PaqCI	CACCTGC	1 cut(s)	1858
PceI	AGGCCT	1 cut(s)	1485
PciI	ACATGT	3 cut(s)	348, 1336, 1886
PciSI	GCTCTTC	3 cut(s)	350, 1425, 1953
PcsI	WCGNNNNNNNCGW	2 cut(s)	1876, 2189
PctI	GAATGC	2 cut(s)	77, 184
PfeI	GAWTC	8 cut(s)	226, 331, 416, 580, 658, 1067, 1769, 2107
PflFI	GACNNNGTC	1 cut(s)	1115
PleI	GAGTC	1 cut(s)	1185
PpsI	GAGTC	1 cut(s)	1185
Ppu21I	YACGTR	2 cut(s)	1298, 1367
PscI	ACATGT	3 cut(s)	348, 1336, 1886
PshBI	ATTAAT	1 cut(s)	570
Psp6I	CCWGG	4 cut(s)	1176, 1344, 1490, 1807
PspGI	CCWGG	4 cut(s)	1176, 1344, 1490, 1807
PspN4I	GGNNCC	3 cut(s)	1249, 1281, 1513
PspPI	GGNCC	5 cut(s)	740, 1082, 1151, 1342, 1378
PstI	CTGCAG	1 cut(s)	714
PstNI	CAGNNNCTG	1 cut(s)	661
PsuI	RGATCY	3 cut(s)	970, 1477, 1545
PsyI	GACNNNGTC	1 cut(s)	1115
RsaI	GTAC	5 cut(s)	456, 933, 1527, 1605, 1728
RsaNI	GTAC	5 cut(s)	455, 932, 1526, 1604, 1727
SapI	GCTCTTC	3 cut(s)	350, 1425, 1953
SaqAI	TTAA	7 cut(s)	396, 570, 843, 1236, 1311, 1542, 1674
Sau3AI	GATC	9 cut(s)	7, 133, 296, 970, 1087, 1477, 1545, 2180, 2184
Sau96I	GGNCC	5 cut(s)	740, 1082, 1151, 1342, 1378
SchI	GAGTC	1 cut(s)	1185
ScrFI	CCNGG	4 cut(s)	1178, 1346, 1492, 1809
SexAI	ACCWGGT	1 cut(s)	1807
SfaNI	GCATC	2 cut(s)	1461, 1488
SfcI	CTRYAG	3 cut(s)	462, 710, 1703
SinI	GGWCC	2 cut(s)	1082, 1151
SseBI	AGGCCT	1 cut(s)	1485
SsiI	CCGC	4 cut(s)	1230, 1549, 1573, 2149
SspI	AATATT	1 cut(s)	1417
SspMI	CTAG	8 cut(s)	144, 1100, 1197, 1352, 1481, 1502, 1533, 1592
StuI	AGGCCT	1 cut(s)	1485
StyD4I	CCNGG	4 cut(s)	1176, 1344, 1490, 1807
StyI	CCWWGG	3 cut(s)	775, 927, 1552
TaaI	ACNGT	7 cut(s)	29, 403, 454, 631, 1213, 1375, 1511
TaiI	ACGT	5 cut(s)	312, 1300, 1369, 2085, 2195
TaqI	TCGA	6 cut(s)	761, 1161, 1953, 1977, 2028, 2183
TatI	WGTACW	1 cut(s)	1726
TauI	GCSGC	2 cut(s)	1232, 1575
TfiI	GAWTC	8 cut(s)	226, 331, 416, 580, 658, 1067, 1769, 2107
Tru1I	TTAA	7 cut(s)	396, 570, 843, 1236, 1311, 1542, 1674
Tru9I	TTAA	7 cut(s)	396, 570, 843, 1236, 1311, 1542, 1674
TscAI	CASTG	4 cut(s)	111, 1153, 1380, 1432
TseFI	GTSAC	1 cut(s)	1579
Tsp45I	GTSAC	1 cut(s)	1579
TspDTI	ATGAA	7 cut(s)	204, 540, 897, 1681, 1821, 1865, 2184
TspGWI	ACGGA	3 cut(s)	945, 1728, 2113
TspRI	CASTG	4 cut(s)	111, 1153, 1380, 1432
Tth111I	GACNNNGTC	1 cut(s)	1115
VpaK11BI	GGWCC	2 cut(s)	1082, 1151
VspI	ATTAAT	1 cut(s)	570
XapI	RAATTY	4 cut(s)	729, 903, 1756, 1777
XbaI	TCTAGA	2 cut(s)	1532, 1591
XceI	RCATGY	4 cut(s)	352, 1340, 1890, 1928
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1184, 1258
XmiI	GTMKAC	1 cut(s)	706
XspI	CTAG	8 cut(s)	144, 1100, 1197, 1352, 1481, 1502, 1533, 1592

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.