Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0008636

Physical Location & Seq

Genomic Coordinates Reverse (-)

24124291 .. 24128456

Gene Structure 4166 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1113800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2373 bp

ATGCACATAGAGCCTATTTATGATGCATTTTTTTGTCCTTTAACGAAGCAAGTTATGCGTGATCCTGTTACCTTAGAAAACGGTCAAACATTTGAGCGAGAAGCAATTGAAAAGTGGTTTATGGAATGCAAGGAGACTGGAAGGAAGTTGGTCTGCCCACTGACACTACAAGAATTGCAAAGCACTGAGCTAAAGCCTAGCATAGCGCTGAGGAACACCATTGAAGAGTGGAATGCTAGAAATGAAGCTGCTCAGCTTGATATGGCTCGTAAGTCGTTGAATCTGAGCAGCTCAGAAAGTGAAGTTCTTTTCGCCTTGAAGTTTGTCCAGCAAATCTGCCAAAAAAGCAGATCAAGTAAGCACGTTGCACGCAATGCAGGGCTGATACCTATGATAGTTGACATGTTGAAGAGCAGCAGTCGTAAAGTAAGGTGTAAAGCCTTGGAAACCCTTAAAACAGTGGTGGAGGAGGATTCCGATAATAAGGAAATATTGGCTGATGGGGACACGGTACGAACTATAGTGAAGTTCTTGTCTCACGAGCAATCCAAAGAGAGGGAGGAAGCTGTATCTTTGCTGTATGAACTATCCAAATCTGAAGCCTTATGTGAGAAGATTGGTTCAATTAATGGAGCGATTCTTATTTTGGTTGGAATGACAAGCAGCAAATCAGATAACATTTTGACTGTTGAGAACGCTGACAAAACACTGGAGAATCTAGAGAAGTATGAGAACAATGTGAGACAGATGGCTGAAAATGGTAGACTGCAGCCTCTTCTGACACAAATTCGTGAAGGCCCTCCAGAAACCCAACTTTCAATGTCTAATTTCCTTGGTGAGTTAGTTTTGGACAACGATGTAAAGGTCCTAGTGGCTAAAAGTGTTGGTTCAGCTTTGATCAATATCATGAGAAGTGGTAATATGCAGTCAAGAGAAGCAGCTTTGAAAGCTCTCAACCAAATTTCATCTTGTGAGGCGAGTGCCAAGGTACTGATAGAAGCAGGAATACTTCCGTCTCTGGTCAAAGATCTCTTTACCGTTGGGACTAACCAGCTTCCTATGCGACTGAAAGAGGTTGCTGCAACAATTCTTGCTAATGTTGTTAGCTCGGACTATGATTTTGATTCGATCTTGGTTGGACCTGATCAGCAAACGCTAGTCTCCGAAGACATTGTCCATAACCTACTACATCTCATTAGCAACACTGGACCAGCAATCGAGAGCAAGCTTCTCCAGGTTCTTGTTGGACTCACTAGCTCTCCTTCAACTGTTCTGAGTGTTGTTGCCGCCATTAAAAGCTCCGGTGCCATTATTAGTTTGGTGCAGTTTACTGAGGCTCCACAAAAGGAATTGCGTGTGGCTTCCATTAAACTTCTCCAGAACCTCTCCCCACATGTGGGTCAGGAGCTAGCTGATGCCCTACGTGGCACAGTGGGCCAACTTGGAAGCCTAATTAAAGTCATATCAGAAAATATTTCAATCACTGAAGAGCAAGCAGCAGCCATTGGCCTCTTAGCTGAACTTCCGGAGAGGGATCTAGGCCTTGCCAGGCAAATGCTAGATGACGGTGCCTTTAAGCTGATACATTCTAGAGTAGTTAAAATCCGCCAAGGGGGGAGTAAGGGTGGCCGCTTTGTGACGCCATTTTTAGAAGGACTTGTACGAGTTCTAGCAAGGGTTACGCTTGTGTTGGCCGATGAGCAAGATGCAGTCGCTCTGTGCCGTGAACTTAATCTTGCTACACTTTTCATTGAACTTGTACAGGCCAATGGACTGGAGAATGTGCAGATGAGTTCAGCAGCTGCATTGGAGAACTTATCACAAGAATCCAAAAATTTGACAAGATTGCCCGAGTTGCCTACACCTGGTTTCTGTGCTTCAGTTTTTCCATGTTTTAGCAAACAACCTGCCATAAATGGATTGTGTCGGCTTCATCGTGGGACGTGTTCACTTAGAGAAAGTTTTTGTCTCCTGGAGGGACATGCTGTGGAAAAGTTGGTAGCTCTTCTCGACCACACAAACGAGAAGGTGGTTGAAGCAGCACTTGCAGCACTCTCTACTTTGTTGGATGACGGGGTTGATATTGGACAAGGGGTTATGGTGTTGTGTGAAGCAGAGGGTGTGAAGCCTATTCTTGACGTGTTGTTAGAGAAACGGACAGAGAATCTGAGGAGGAGGGCAGTCTGGGTAGTTGAAAGACTATTGCGGAGTGATGAGATAGCCTATGAAGTTTCTGGAGATCCGAACGTGAGCACCGCACTTGTTGATGCCTTCCAGCATGGTGACTATCGAACGCGGCAGATTGCTGAACATGCCCTGAAGCACGTTGACAGGTTACCAAACTTCTCTGGTGTCTTTCCGAACGCAGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006807 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009889 GO:0009890 GO:0009892 GO:0009894 GO:0009987 GO:0010115 GO:0010150 GO:0010271 GO:0010380 GO:0010565 GO:0016020 GO:0016567 GO:0016740 GO:0019216 GO:0019222 GO:0019538 GO:0019747 GO:0019787 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031329 GO:0032446 GO:0032501 GO:0032502 GO:0033612 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043455 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045827 GO:0045833 GO:0046890 GO:0048366 GO:0048367 GO:0048519 GO:0048523 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051055 GO:0051171 GO:0051193 GO:0062012 GO:0062014 GO:0065007 GO:0070647 GO:0070696 GO:0071704 GO:0071944 GO:0080090 GO:0090056 GO:0090359 GO:0090693 GO:0099402 GO:0140096 GO:1901401 GO:1901404 GO:1901463 GO:1901564 GO:1902930 GO:1902931

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

791

Amino Acids

86.44

Weight (kDa)

5.38

Isoelectric Point (pI)

41.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U-box	PF04564	8 - 82	1.1e-14	U-box domain
ARM_ARMC5	PF24768	87 - 264	2.7e-07	ARMC5
ARM_PUB	PF25598	91 - 205	1.1e-07	Plant U-box protein ARM repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008636)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20780 AT1G20780 AT1G20780 AT1G76390 AT1G76390
fragaria_vesca	FvH4_5g25630 FvH4_5g25630
malus_domestica	MD00G1113800.v1.1 MD06G1007200.v1.1
prunus_persica	Prupe.5G009100_v2.0.a1 Prupe.5G009100_v2.0.a1
pyrus_communis	pycom06g00630 pycom16g26080
rosa_chinensis	RchiOBHm_Chr7g0215921
rosa_laevigata	RLG00000002607
rosa_multiflora	Rmu_sc0006240.1_g000004
rosa_roxburghii	Rroxscaffold_3G00243800
rosa_rugosa	Rorug07G0156800
rosa_samantha	Rh7AG294900 Rh7BG286900 Rh7CG315000 Rh7DG297700
rosa_wichuraiana	Rw7G025050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1915
AccB1I	GGYRCC	2 cut(s)	1304, 1568
AccI	GTMKAC	1 cut(s)	763
AccII	CGCG	1 cut(s)	2296
AccIII	TCCGGA	1 cut(s)	1525
AciI	CCGC	6 cut(s)	1287, 1606, 1630, 2206, 2256, 2296
AclWI	GGATC	3 cut(s)	56, 1542, 2234
AcoI	YGGCCR	2 cut(s)	1627, 1692
AcsI	RAATTY	3 cut(s)	786, 960, 1834
AcuI	CTGAAG	4 cut(s)	618, 1506, 1863, 2339
AcyI	GRCGYC	1 cut(s)	1640
AfaI	GTAC	4 cut(s)	513, 990, 1662, 1761
AfeI	AGCGCT	1 cut(s)	207
AfiI	CCNNNNNNNGG	6 cut(s)	555, 1396, 1397, 1612, 1865, 2366
AflIII	ACRYGT	4 cut(s)	402, 1393, 1943, 2139
AjiI	CACGTC	2 cut(s)	1944, 2140
AjnI	CCWGG	4 cut(s)	1233, 1547, 1864, 1971
Alw21I	GWGCWC	1 cut(s)	2255
Alw26I	GTCTC	6 cut(s)	128, 540, 736, 1020, 1165, 1973
AlwI	GGATC	3 cut(s)	56, 1542, 2234
AlwNI	CAGNNNCTG	1 cut(s)	1802
Ama87I	CYCGRG	1 cut(s)	1850
Aor13HI	TCCGGA	1 cut(s)	1525
Aor51HI	AGCGCT	1 cut(s)	207
AoxI	GGCC	7 cut(s)	796, 1435, 1507, 1540, 1627, 1692, 1764
ApoI	RAATTY	3 cut(s)	786, 960, 1834
ArsI	GACNNNNNNTTYG	4 cut(s)	1103, 1135, 1158, 1190
AseI	ATTAAT	1 cut(s)	627
AspLEI	GCGC	1 cut(s)	208
AspS9I	GGNCC	5 cut(s)	797, 865, 1139, 1208, 1435
AsuHPI	GGTGA	2 cut(s)	848, 2294
AsuNHI	GCTAGC	1 cut(s)	1408
AvaI	CYCGRG	1 cut(s)	1850
AvaII	GGWCC	3 cut(s)	865, 1139, 1208
BanI	GGYRCC	2 cut(s)	1304, 1568
BarI	GAAGNNNNNNTAC	4 cut(s)	990, 1022, 1644, 1676
BauI	CACGAG	1 cut(s)	539
BbsI	GAAGAC	1 cut(s)	1173
Bbv12I	GWGCWC	1 cut(s)	2255
BbvCI	CCTCAGC	1 cut(s)	209
BccI	CCATC	2 cut(s)	494, 742
BceAI	ACGGC	1 cut(s)	1707
BciT130I	CCWGG	4 cut(s)	1235, 1549, 1866, 1973
BclI	TGATCA	2 cut(s)	897, 1144
BcoDI	GTCTC	6 cut(s)	128, 540, 736, 1020, 1165, 1973
BfmI	CTRYAG	2 cut(s)	519, 767
BfoI	RGCGCY	1 cut(s)	209
BfuAI	ACCTGC	1 cut(s)	1915
BglII	AGATCT	1 cut(s)	1027
BlpI	GCTNAGC	1 cut(s)	252
Bme1390I	CCNGG	4 cut(s)	1235, 1549, 1866, 1973
Bme18I	GGWCC	3 cut(s)	865, 1139, 1208
BmeT110I	CYCGRG	1 cut(s)	1850
BmgBI	CACGTC	2 cut(s)	1944, 2140
BmgT120I	GGNCC	5 cut(s)	797, 865, 1139, 1208, 1435
BmiI	GGNNCC	3 cut(s)	1306, 1338, 1570
BmrFI	CCNGG	4 cut(s)	1235, 1549, 1866, 1973
BmsI	GCATC	4 cut(s)	13, 1405, 1696, 2257
BmtI	GCTAGC	1 cut(s)	1412
BpiI	GAAGAC	1 cut(s)	1173
BpmI	CTGGAG	7 cut(s)	731, 786, 1217, 1361, 1796, 1994, 2256
Bpu10I	CCTNAGC	1 cut(s)	209
Bpu1102I	GCTNAGC	1 cut(s)	252
BsaAI	YACGTR	1 cut(s)	1424
BsaBI	GATNNNNATC	1 cut(s)	902
BsaHI	GRCGYC	1 cut(s)	1640
BsaJI	CCNNGG	4 cut(s)	441, 832, 984, 1609
BsaWI	WCCGGW	2 cut(s)	1301, 1525
BsaXI	ACNNNNNCTCC	6 cut(s)	1243, 1273, 1321, 1351, 1609, 1639
Bsc4I	CCNNNNNNNGG	6 cut(s)	555, 1396, 1397, 1612, 1865, 2366
Bse1I	ACTGG	4 cut(s)	142, 714, 1210, 1779
Bse3DI	GCAATG	1 cut(s)	379
Bse8I	GATNNNNATC	1 cut(s)	902
BseAI	TCCGGA	1 cut(s)	1525
BseBI	CCWGG	4 cut(s)	1235, 1549, 1866, 1973
BseDI	CCNNGG	4 cut(s)	441, 832, 984, 1609
BseGI	GGATG	1 cut(s)	2074
BseJI	GATNNNNATC	1 cut(s)	902
BseLI	CCNNNNNNNGG	6 cut(s)	555, 1396, 1397, 1612, 1865, 2366
BseMI	GCAATG	1 cut(s)	379
BseMII	CTCAG	8 cut(s)	177, 200, 266, 275, 306, 1265, 1323, 2159
BseNI	ACTGG	4 cut(s)	142, 714, 1210, 1779
BseRI	GAGGAG	3 cut(s)	482, 2185, 2188
BsgI	GTGCAG	2 cut(s)	1343, 1805
Bsh1236I	CGCG	1 cut(s)	2296
BshFI	GGCC	7 cut(s)	798, 1437, 1509, 1542, 1629, 1694, 1766
BshNI	GGYRCC	2 cut(s)	1304, 1568
BsiHKAI	GWGCWC	1 cut(s)	2255
BsiHKCI	CYCGRG	1 cut(s)	1850
BsiSI	CCGG	2 cut(s)	1302, 1526
BslFI	GGGAC	4 cut(s)	518, 1057, 1954, 1992
BslI	CCNNNNNNNGG	6 cut(s)	555, 1396, 1397, 1612, 1865, 2366
BsmAI	GTCTC	6 cut(s)	128, 540, 736, 1020, 1165, 1973
BsmBI	CGTCTC	1 cut(s)	1020
BsmFI	GGGAC	4 cut(s)	518, 1057, 1954, 1992
BsmI	GAATGC	2 cut(s)	131, 238
BsnI	GGCC	7 cut(s)	798, 1437, 1509, 1542, 1629, 1694, 1766
BsoBI	CYCGRG	1 cut(s)	1850
Bsp1286I	GDGCHC	1 cut(s)	2255
Bsp13I	TCCGGA	1 cut(s)	1525
Bsp1407I	TGTACA	1 cut(s)	1759
Bsp143I	GATC	8 cut(s)	61, 350, 897, 1027, 1128, 1144, 1534, 2239
Bsp1720I	GCTNAGC	1 cut(s)	252
BspACI	CCGC	6 cut(s)	1287, 1606, 1630, 2206, 2256, 2296
BspANI	GGCC	7 cut(s)	798, 1437, 1509, 1542, 1629, 1694, 1766
BspCNI	CTCAG	8 cut(s)	178, 201, 265, 276, 305, 1266, 1324, 2160
BspEI	TCCGGA	1 cut(s)	1525
BspFNI	CGCG	1 cut(s)	2296
BspHI	TCATGA	1 cut(s)	906
BspLI	GGNNCC	3 cut(s)	1306, 1338, 1570
BspMAI	CTGCAG	1 cut(s)	771
BspMI	ACCTGC	1 cut(s)	1915
BspOI	GCTAGC	1 cut(s)	1412
BspPI	GGATC	3 cut(s)	56, 1542, 2234
BspQI	GCTCTTC	3 cut(s)	404, 1482, 2010
BspT107I	GGYRCC	2 cut(s)	1304, 1568
BsrDI	GCAATG	1 cut(s)	379
BsrGI	TGTACA	1 cut(s)	1759
BsrI	ACTGG	4 cut(s)	142, 714, 1210, 1779
BssECI	CCNNGG	4 cut(s)	441, 832, 984, 1609
BssMI	GATC	8 cut(s)	61, 350, 897, 1027, 1128, 1144, 1534, 2239
BssNI	GRCGYC	1 cut(s)	1640
BssSI	CACGAG	1 cut(s)	539
BssT1I	CCWWGG	4 cut(s)	441, 832, 984, 1609
Bst2BI	CACGAG	1 cut(s)	539
Bst2UI	CCWGG	4 cut(s)	1235, 1549, 1866, 1973
Bst4CI	ACNGT	8 cut(s)	83, 460, 511, 688, 1039, 1270, 1432, 1568
Bst6I	CTCTTC	5 cut(s)	219, 404, 780, 1482, 2010
BstACI	GRCGYC	1 cut(s)	1640
BstAPI	GCANNNNNTGC	3 cut(s)	55, 374, 2045
BstAUI	TGTACA	1 cut(s)	1759
BstBAI	YACGTR	1 cut(s)	1424
BstC8I	GCNNGC	4 cut(s)	370, 1226, 1410, 1494
BstEII	GGTNACC	1 cut(s)	2334
BstF5I	GGATG	1 cut(s)	2074
BstFNI	CGCG	1 cut(s)	2296
BstH2I	RGCGCY	1 cut(s)	209
BstHHI	GCGC	1 cut(s)	208
BstKTI	GATC	8 cut(s)	64, 353, 900, 1030, 1131, 1147, 1537, 2242
BstMAI	GTCTC	6 cut(s)	128, 540, 736, 1020, 1165, 1973
BstMBI	GATC	8 cut(s)	61, 350, 897, 1027, 1128, 1144, 1534, 2239
BstNI	CCWGG	4 cut(s)	1235, 1549, 1866, 1973
BstNSI	RCATGY	4 cut(s)	406, 1397, 1985, 2315
BstPI	GGTNACC	1 cut(s)	2334
BstSCI	CCNGG	4 cut(s)	1233, 1547, 1864, 1971
BstSFI	CTRYAG	2 cut(s)	519, 767
BstUI	CGCG	1 cut(s)	2296
BstV2I	GAAGAC	1 cut(s)	1173
BstX2I	RGATCY	3 cut(s)	1027, 1534, 2239
BstXI	CCANNNNNNTGG	1 cut(s)	1774
BstYI	RGATCY	3 cut(s)	1027, 1534, 2239
BsuRI	GGCC	7 cut(s)	798, 1437, 1509, 1542, 1629, 1694, 1766
BtrI	CACGTC	2 cut(s)	1944, 2140
BtsCI	GGATG	1 cut(s)	2074
BtsIMutI	CAGTG	7 cut(s)	158, 183, 465, 707, 1203, 1437, 1482
BveI	ACCTGC	1 cut(s)	1915
Cac8I	GCNNGC	4 cut(s)	370, 1226, 1410, 1494
CaiI	CAGNNNCTG	1 cut(s)	1802
CciI	TCATGA	1 cut(s)	906
CfoI	GCGC	1 cut(s)	208
Cfr13I	GGNCC	5 cut(s)	797, 865, 1139, 1208, 1435
CseI	GACGC	1 cut(s)	1648
CsiI	ACCWGGT	1 cut(s)	1864
Csp6I	GTAC	4 cut(s)	512, 989, 1661, 1760
CviAII	CATG	7 cut(s)	403, 907, 1394, 1890, 1982, 2279, 2312
CviQI	GTAC	4 cut(s)	512, 989, 1661, 1760
DpnI	GATC	8 cut(s)	63, 352, 899, 1029, 1130, 1146, 1536, 2241
DpnII	GATC	8 cut(s)	61, 350, 897, 1027, 1128, 1144, 1534, 2239
EaeI	YGGCCR	2 cut(s)	1627, 1692
Eam1104I	CTCTTC	5 cut(s)	219, 404, 780, 1482, 2010
EarI	CTCTTC	5 cut(s)	219, 404, 780, 1482, 2010
EciI	GGCGGA	1 cut(s)	1595
Eco130I	CCWWGG	4 cut(s)	441, 832, 984, 1609
Eco147I	AGGCCT	1 cut(s)	1542
Eco47I	GGWCC	3 cut(s)	865, 1139, 1208
Eco47III	AGCGCT	1 cut(s)	207
Eco57I	CTGAAG	4 cut(s)	618, 1506, 1863, 2339
Eco88I	CYCGRG	1 cut(s)	1850
Eco91I	GGTNACC	1 cut(s)	2334
EcoO109I	RGGNCCY	2 cut(s)	797, 865
EcoO65I	GGTNACC	1 cut(s)	2334
EcoRII	CCWGG	4 cut(s)	1233, 1547, 1864, 1971
EcoT14I	CCWWGG	4 cut(s)	441, 832, 984, 1609
EcoT22I	ATGCAT	1 cut(s)	28
ErhI	CCWWGG	4 cut(s)	441, 832, 984, 1609
Esp3I	CGTCTC	1 cut(s)	1020
FaeI	CATG	7 cut(s)	406, 910, 1397, 1893, 1985, 2282, 2315
FalI	AAGNNNNNCTT	2 cut(s)	2028, 2060
FaqI	GGGAC	4 cut(s)	518, 1057, 1954, 1992
FatI	CATG	7 cut(s)	402, 906, 1393, 1889, 1981, 2278, 2311
FbaI	TGATCA	2 cut(s)	897, 1144
FblI	GTMKAC	1 cut(s)	763
FokI	GGATG	1 cut(s)	2081
GlaI	GCGC	1 cut(s)	207
GsuI	CTGGAG	7 cut(s)	731, 786, 1217, 1361, 1796, 1994, 2256
HaeII	RGCGCY	1 cut(s)	209
HaeIII	GGCC	7 cut(s)	798, 1437, 1509, 1542, 1629, 1694, 1766
HapII	CCGG	2 cut(s)	1302, 1526
HgaI	GACGC	1 cut(s)	1648
HhaI	GCGC	1 cut(s)	208
Hin1I	GRCGYC	1 cut(s)	1640
Hin1II	CATG	7 cut(s)	406, 910, 1397, 1893, 1985, 2282, 2315
Hin6I	GCGC	1 cut(s)	206
HinP1I	GCGC	1 cut(s)	206
HincII	GTYRAC	2 cut(s)	400, 2329
HindII	GTYRAC	2 cut(s)	400, 2329
HindIII	AAGCTT	1 cut(s)	1226
HinfI	GANTC	8 cut(s)	280, 473, 637, 715, 1124, 1248, 1826, 2164
HpaII	CCGG	2 cut(s)	1302, 1526
HphI	GGTGA	2 cut(s)	848, 2294
Hpy166II	GTNNAC	6 cut(s)	400, 764, 1329, 1727, 1949, 2329
Hpy8I	GTNNAC	6 cut(s)	400, 764, 1329, 1727, 1949, 2329
HpyAV	CCTTC	6 cut(s)	135, 788, 1272, 1646, 2020, 2281
HpyCH4III	ACNGT	8 cut(s)	83, 460, 511, 688, 1039, 1270, 1432, 1568
HpyCH4IV	ACGT	6 cut(s)	363, 1423, 1943, 2139, 2247, 2325
HpySE526I	ACGT	6 cut(s)	363, 1423, 1943, 2139, 2247, 2325
Hsp92I	GRCGYC	1 cut(s)	1640
Hsp92II	CATG	7 cut(s)	406, 910, 1397, 1893, 1985, 2282, 2315
HspAI	GCGC	1 cut(s)	206
Kpn2I	TCCGGA	1 cut(s)	1525
Ksp22I	TGATCA	2 cut(s)	897, 1144
Kzo9I	GATC	8 cut(s)	61, 350, 897, 1027, 1128, 1144, 1534, 2239
LguI	GCTCTTC	3 cut(s)	404, 1482, 2010
LmnI	GCTCC	4 cut(s)	632, 1304, 1342, 1405
LweI	GCATC	4 cut(s)	13, 1405, 1696, 2257
MabI	ACCWGGT	1 cut(s)	1864
MaeII	ACGT	6 cut(s)	363, 1423, 1943, 2139, 2247, 2325
MaeIII	GTNAC	5 cut(s)	67, 1636, 1678, 2282, 2334
MalI	GATC	8 cut(s)	63, 352, 899, 1029, 1130, 1146, 1536, 2241
MboI	GATC	8 cut(s)	61, 350, 897, 1027, 1128, 1144, 1534, 2239
MboII	GAAGA	7 cut(s)	236, 421, 625, 767, 1178, 1499, 1997
MfeI	CAATTG	1 cut(s)	105
MflI	RGATCY	3 cut(s)	1027, 1534, 2239
MhlI	GDGCHC	1 cut(s)	2255
MlyI	GAGTC	1 cut(s)	1242
MmeI	TCCRAC	4 cut(s)	631, 1117, 1225, 2046
Mph1103I	ATGCAT	1 cut(s)	28
MroI	TCCGGA	1 cut(s)	1525
MseI	TTAA	9 cut(s)	41, 453, 627, 1293, 1368, 1455, 1575, 1599, 1731
MspA1I	CMGCKG	1 cut(s)	1802
MspI	CCGG	2 cut(s)	1302, 1526
MspR9I	CCNGG	4 cut(s)	1235, 1549, 1866, 1973
MunI	CAATTG	1 cut(s)	105
Mva1269I	GAATGC	2 cut(s)	131, 238
MvaI	CCWGG	4 cut(s)	1235, 1549, 1866, 1973
MvnI	CGCG	1 cut(s)	2296
NdeII	GATC	8 cut(s)	61, 350, 897, 1027, 1128, 1144, 1534, 2239
NheI	GCTAGC	1 cut(s)	1408
NlaIII	CATG	7 cut(s)	406, 910, 1397, 1893, 1985, 2282, 2315
NlaIV	GGNNCC	3 cut(s)	1306, 1338, 1570
NmuCI	GTSAC	2 cut(s)	1636, 2282
NsiI	ATGCAT	1 cut(s)	28
NspI	RCATGY	4 cut(s)	406, 1397, 1985, 2315
PagI	TCATGA	1 cut(s)	906
PceI	AGGCCT	1 cut(s)	1542
PciI	ACATGT	2 cut(s)	402, 1393
PciSI	GCTCTTC	3 cut(s)	404, 1482, 2010
PcsI	WCGNNNNNNNCGW	1 cut(s)	1933
PctI	GAATGC	2 cut(s)	131, 238
PfeI	GAWTC	7 cut(s)	280, 473, 637, 715, 1124, 1826, 2164
PflFI	GACNNNGTC	1 cut(s)	1172
PfoI	TCCNGGA	1 cut(s)	1971
PleI	GAGTC	1 cut(s)	1242
PpsI	GAGTC	1 cut(s)	1242
Ppu21I	YACGTR	1 cut(s)	1424
PpuMI	RGGWCCY	1 cut(s)	865
PscI	ACATGT	2 cut(s)	402, 1393
PshBI	ATTAAT	1 cut(s)	627
Psp5II	RGGWCCY	1 cut(s)	865
Psp6I	CCWGG	4 cut(s)	1233, 1547, 1864, 1971
PspEI	GGTNACC	1 cut(s)	2334
PspGI	CCWGG	4 cut(s)	1233, 1547, 1864, 1971
PspN4I	GGNNCC	3 cut(s)	1306, 1338, 1570
PspPI	GGNCC	5 cut(s)	797, 865, 1139, 1208, 1435
PspPPI	RGGWCCY	1 cut(s)	865
PstI	CTGCAG	1 cut(s)	771
PstNI	CAGNNNCTG	1 cut(s)	1802
PsuI	RGATCY	3 cut(s)	1027, 1534, 2239
PsyI	GACNNNGTC	1 cut(s)	1172
PvuII	CAGCTG	1 cut(s)	1802
RsaI	GTAC	4 cut(s)	513, 990, 1662, 1761
RsaNI	GTAC	4 cut(s)	512, 989, 1661, 1760
SapI	GCTCTTC	3 cut(s)	404, 1482, 2010
SaqAI	TTAA	9 cut(s)	41, 453, 627, 1293, 1368, 1455, 1575, 1599, 1731
Sau3AI	GATC	8 cut(s)	61, 350, 897, 1027, 1128, 1144, 1534, 2239
Sau96I	GGNCC	5 cut(s)	797, 865, 1139, 1208, 1435
SchI	GAGTC	1 cut(s)	1242
ScrFI	CCNGG	4 cut(s)	1235, 1549, 1866, 1973
SduI	GDGCHC	1 cut(s)	2255
SexAI	ACCWGGT	1 cut(s)	1864
SfaNI	GCATC	4 cut(s)	13, 1405, 1696, 2257
SfcI	CTRYAG	2 cut(s)	519, 767
SinI	GGWCC	3 cut(s)	865, 1139, 1208
SseBI	AGGCCT	1 cut(s)	1542
SsiI	CCGC	6 cut(s)	1287, 1606, 1630, 2206, 2256, 2296
SspI	AATATT	2 cut(s)	492, 1474
StuI	AGGCCT	1 cut(s)	1542
StyD4I	CCNGG	4 cut(s)	1233, 1547, 1864, 1971
StyI	CCWWGG	4 cut(s)	441, 832, 984, 1609
TaaI	ACNGT	8 cut(s)	83, 460, 511, 688, 1039, 1270, 1432, 1568
TaiI	ACGT	6 cut(s)	366, 1426, 1946, 2142, 2250, 2328
TaqI	TCGA	4 cut(s)	1127, 1218, 2010, 2290
TatI	WGTACW	1 cut(s)	1759
TauI	GCSGC	3 cut(s)	1289, 1632, 2299
TfiI	GAWTC	7 cut(s)	280, 473, 637, 715, 1124, 1826, 2164
Tru1I	TTAA	9 cut(s)	41, 453, 627, 1293, 1368, 1455, 1575, 1599, 1731
Tru9I	TTAA	9 cut(s)	41, 453, 627, 1293, 1368, 1455, 1575, 1599, 1731
TscAI	CASTG	7 cut(s)	165, 190, 465, 714, 1210, 1437, 1489
TseFI	GTSAC	2 cut(s)	1636, 2282
Tsp45I	GTSAC	2 cut(s)	1636, 2282
TspDTI	ATGAA	6 cut(s)	258, 597, 954, 1738, 1922, 2241
TspGWI	ACGGA	2 cut(s)	1002, 2170
TspRI	CASTG	7 cut(s)	165, 190, 465, 714, 1210, 1437, 1489
Tth111I	GACNNNGTC	1 cut(s)	1172
VpaK11BI	GGWCC	3 cut(s)	865, 1139, 1208
VspI	ATTAAT	1 cut(s)	627
XapI	RAATTY	3 cut(s)	786, 960, 1834
XbaI	TCTAGA	2 cut(s)	718, 1589
XceI	RCATGY	4 cut(s)	406, 1397, 1985, 2315
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1241, 1315
XmiI	GTMKAC	1 cut(s)	763
Zsp2I	ATGCAT	1 cut(s)	28

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.