Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0008636

Physical Location & Seq

Genomic Coordinates Forward (+)

31303056 .. 31306592

Gene Structure 3537 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G025050.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2370 bp

ATGGCTGAAAGCTGGCAGGGGAGTTATGACGCCGGCAGCCAGTCAGATGACAGCTATAGATTTGAGAGGCTGCTGCACATTGAGCCTATTTATGATTCATTCTTTTGCCCCTTAACAAAGCAAGTTATGCGGGACCCCGTTACCTTAGAAAATGGGCAAACATTTGAACGCGAAGCAATTGAAAAGTGGTTCAGGGAGTGCAAGGAGAGTGGAAAGAATTTACAGTGCCCACTCACACTAAGAGAATTAAAAAGCGCTGAATTGAAGCCGAGCATAGCTTTGCGAAACACCATTGAAGAGTGGAGTGCTAGGAATGAAGCTGCTCAGCTTGATATGGCTCGTAAATCATTGAATTCGAGCAGTTCAGAAGATGATATTCTTTTGGCCTTGGAGTATGTCCAGCAAATCTGCAAGAAAAGCAGATCAAATAAGCACATTGCACGAAATGCAGGATTGTTGCCCATGATCATTGACATGTTGAAGAGCAGCAGTCGTAGAGTTAGGTGTAAATCTTTGGACACCCTAAGAATTGTTGTAGAGGACGATTCTGAAAATAAGGAAATATTGGCAGAGGGGGACACTGTACGCTCAATAGTAAAGTTCTTGTCTCATGAGCAATCTAAAGAGAGAGAGGAAGCTGTCTGTTTGCTATATGAACTATCCAAATCCGAAGCCTTATGTGAGAAGATTGGTTCAATTCCCGGAGCAATTCTTATGTTGGTTGGAATGACAAGCAGCAAATCAGATAACGTTTTGACTGTTGAGAACGCTGAGAGAACATTAGAGAATCTGGAGAAGTGTGAGAACAATGTGCTTCAGATGGCTGAAAATGGTAGACTGCAGGCTCTTCTGACACAAATTCTTGAAGTGGCTAAAAGTCTGGGTTCATCTTTGATCAATATCATGAGAAGTGGTAATATGCAGTCAAGAGAAGCTGCTTTGAAAGCTCTAAACCAAATTTCATCTTGTGAGGCAAGTGCCAAGGTGCTGATAGAGGCAGGAATACTTCCATCTCTGGTCAAAGACCTCTTTACTGTTGGCCCTCATCAGCTTCCTATGCGACTCAAAGAGGTTGCTGCAACAATTCTTGCTAATATTGTTTACTCAGACTATGACTTTGATTCCATATTAGTTGGACCTGATCACCAGACTCTAGTCTCAGAAGACATAGTCCATAACCTACTACATTTAATTAGCAACACAGGCCCAGCAATCGAGTGCAAGCTTCTTCAGGTTCTTGTTGGACTCACTGGCTCTCCCTCTACTGTTTTGAGTGTTGTTGCCGCCATTAAAAGCTCTGGCGCCATTATTAGTTTGGTGCAGTTTATTGAAGCTCCACAAAAGGAGTTGCGTGTGGCTTGCATTAAACTTCTCCAAAACCTCTCCCCACACGTGGGTCAGGAACTAGCTGACGCTCTACGTGGCACAGTGGGCCAACTTGGCAGCCTAATCAAAGTAATATCAGAAAATATTTCAGTCACTGACGAGCAAGCAGCAGCCATTGCCCTCTTAGCTGAACTTCCGGAGAGGGATCTGGGCCTCGCCCGACAAATGCTAGATGAAGGTGCCTTCCAACTGGTGTTTTCCAGAGTAGTTAAGATACGACAAGGAGGGACTAAGGGGGGCCGCTTTATCACACCATTTCTAGAAGGGCTTGTACGGGTTCTAGCAAGGGTTACTCTTGTGTTGGCTGAAGAGCAAGATGCAATTACACTCTGCCGTGAGCTTAATGTTGCAGCCCTTTTCATTGAGCTTCTTCAATCCAATGGACTGGACAATGTACAGATGAGTTCTGCCGCAGCATTGGAGAACTTATCACAAGAATCCAAAAATTTGACAAAATTTCCCGAGTTGCCTACCCCTGGTGTTTGTGCCTCAATTTTCCCATGCTTTAGCAAGCAACCTACCATAAATGGACTGTGTCGGCTTCACCGTGGCACATGCTCACTTAGAGAAAGTTTTTGTCTCTTGGAAGGACAGGCTGTGGACAAATTGGTGGCTCTTCTTGACCACACAAATGAGAAGGTGGTTGAAGCAGCCCTTGCAGCATTGTCTACTTTGTTGGATGATGGGGTTGATATCGAACAAGGGGTTTTGGTATTGTGTGAAGCAGAGGGAGTCAGACCCATTCTAGATGTGTTACTAGAGAAACGGACAGAGAATCTGAGGAGGAGGGCAGTTTGGGTAGTTGAGAGACTATTGCGGAGCGATGAGATAGCCTATGAAGTGTCTGGAGATCCAAATGTGAGTACCGCACTTGTTGATGCATTCCAGCATGGTGACTATCGAACCCGACAGATTGCCGAACGTGCTTTGAAGCATGTTGACAGGTTACCAAACTTCTCTGGAGTGTTTCCAAGTGCAGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006807 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009889 GO:0009890 GO:0009892 GO:0009894 GO:0009987 GO:0010115 GO:0010150 GO:0010271 GO:0010380 GO:0010565 GO:0016020 GO:0016567 GO:0016740 GO:0019216 GO:0019222 GO:0019538 GO:0019747 GO:0019787 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031329 GO:0032446 GO:0032501 GO:0032502 GO:0033612 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043455 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045827 GO:0045833 GO:0046890 GO:0048366 GO:0048367 GO:0048519 GO:0048523 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051055 GO:0051171 GO:0051193 GO:0062012 GO:0062014 GO:0065007 GO:0070647 GO:0070696 GO:0071704 GO:0071944 GO:0080090 GO:0090056 GO:0090359 GO:0090693 GO:0099402 GO:0140096 GO:1901401 GO:1901404 GO:1901463 GO:1901564 GO:1902930 GO:1902931

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

789

Amino Acids

86.73

Weight (kDa)

5.24

Isoelectric Point (pI)

46.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U-box	PF04564	32 - 106	1.6e-14	U-box domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008636)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20780 AT1G20780 AT1G20780 AT1G76390 AT1G76390
fragaria_vesca	FvH4_5g25630 FvH4_5g25630
malus_domestica	MD00G1113800.v1.1 MD06G1007200.v1.1
prunus_persica	Prupe.5G009100_v2.0.a1 Prupe.5G009100_v2.0.a1
pyrus_communis	pycom06g00630 pycom16g26080
rosa_chinensis	RchiOBHm_Chr7g0215921
rosa_laevigata	RLG00000002607
rosa_multiflora	Rmu_sc0006240.1_g000004
rosa_roxburghii	Rroxscaffold_3G00243800
rosa_rugosa	Rorug07G0156800
rosa_samantha	Rh7AG294900 Rh7BG286900 Rh7CG315000 Rh7DG297700
rosa_wichuraiana	Rw7G025050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	1301, 1565
AccI	GTMKAC	2 cut(s)	835, 2054
AccII	CGCG	1 cut(s)	171
AccIII	TCCGGA	1 cut(s)	1522
AciI	CCGC	6 cut(s)	130, 1284, 1627, 1797, 2203, 2253
AclI	AACGTT	1 cut(s)	750
AclWI	GGATC	2 cut(s)	1539, 2231
AcsI	RAATTY	6 cut(s)	217, 352, 858, 957, 1831, 1841
AcuI	CTGAAG	3 cut(s)	800, 1214, 1713
AcvI	CACGTG	1 cut(s)	1393
AcyI	GRCGYC	2 cut(s)	30, 1302
AfaI	GTAC	4 cut(s)	585, 1659, 1782, 2251
AfeI	AGCGCT	1 cut(s)	256
AfiI	CCNNNNNNNGG	4 cut(s)	1393, 1394, 1862, 2363
AflIII	ACRYGT	2 cut(s)	474, 1390
AjnI	CCWGG	1 cut(s)	1861
Alw26I	GTCTC	4 cut(s)	612, 1162, 1970, 2188
AlwI	GGATC	2 cut(s)	1539, 2231
AlwNI	CAGNNNCTG	1 cut(s)	1481
Ama87I	CYCGRG	1 cut(s)	1847
Aor13HI	TCCGGA	1 cut(s)	1522
Aor51HI	AGCGCT	1 cut(s)	256
AoxI	GGCC	6 cut(s)	384, 1039, 1204, 1432, 1537, 1624
ApoI	RAATTY	6 cut(s)	217, 352, 858, 957, 1831, 1841
ArsI	GACNNNNNNTTYG	2 cut(s)	1100, 1132
AspLEI	GCGC	2 cut(s)	257, 1304
AspS9I	GGNCC	7 cut(s)	133, 1040, 1136, 1205, 1432, 1537, 1624
AsuC2I	CCSGG	1 cut(s)	702
AsuHPI	GGTGA	3 cut(s)	1136, 1922, 2291
AvaI	CYCGRG	1 cut(s)	1847
AvaII	GGWCC	2 cut(s)	133, 1136
BaeGI	GKGCMC	1 cut(s)	230
BanI	GGYRCC	2 cut(s)	1301, 1565
BarI	GAAGNNNNNNTAC	2 cut(s)	1641, 1673
BbrPI	CACGTG	1 cut(s)	1393
BbsI	GAAGAC	1 cut(s)	1170
BccI	CCATC	3 cut(s)	814, 1018, 2063
BceAI	ACGGC	1 cut(s)	1704
BciT130I	CCWGG	1 cut(s)	1863
BclI	TGATCA	3 cut(s)	465, 894, 1141
BcnI	CCSGG	1 cut(s)	702
BcoDI	GTCTC	4 cut(s)	612, 1162, 1970, 2188
BfaI	CTAG	8 cut(s)	309, 1154, 1406, 1556, 1646, 1667, 2132, 2144
BfmI	CTRYAG	2 cut(s)	55, 839
BfoI	RGCGCY	2 cut(s)	258, 1305
BglI	GCCNNNNNGGC	1 cut(s)	1440
BlpI	GCTNAGC	1 cut(s)	324
Bme1390I	CCNGG	2 cut(s)	702, 1863
Bme18I	GGWCC	2 cut(s)	133, 1136
BmeT110I	CYCGRG	1 cut(s)	1847
BmgT120I	GGNCC	7 cut(s)	133, 1040, 1136, 1205, 1432, 1537, 1624
BmiI	GGNNCC	5 cut(s)	134, 135, 1303, 1567, 1625
BmrFI	CCNGG	2 cut(s)	702, 1863
BmsI	GCATC	2 cut(s)	1693, 2254
BoxI	GACNNNNGTC	1 cut(s)	1154
BpiI	GAAGAC	1 cut(s)	1170
BpmI	CTGGAG	3 cut(s)	812, 2253, 2367
Bpu1102I	GCTNAGC	1 cut(s)	324
BpuMI	CCSGG	1 cut(s)	702
BsaAI	YACGTR	2 cut(s)	1393, 1421
BsaBI	GATNNNNATC	1 cut(s)	899
BsaHI	GRCGYC	2 cut(s)	30, 1302
BsaJI	CCNNGG	4 cut(s)	387, 981, 1861, 1933
BsaWI	WCCGGW	1 cut(s)	1522
BsaXI	ACNNNNNCTCC	2 cut(s)	1240, 1270
Bsc4I	CCNNNNNNNGG	4 cut(s)	1393, 1394, 1862, 2363
Bse118I	RCCGGY	1 cut(s)	32
Bse1I	ACTGG	4 cut(s)	40, 1255, 1581, 1776
Bse3DI	GCAATG	2 cut(s)	435, 1500
Bse8I	GATNNNNATC	1 cut(s)	899
BseAI	TCCGGA	1 cut(s)	1522
BseBI	CCWGG	1 cut(s)	1863
BseDI	CCNNGG	4 cut(s)	387, 981, 1861, 1933
BseGI	GGATG	1 cut(s)	2071
BseJI	GATNNNNATC	1 cut(s)	899
BseLI	CCNNNNNNNGG	4 cut(s)	1393, 1394, 1862, 2363
BseMI	GCAATG	2 cut(s)	435, 1500
BseMII	CTCAG	5 cut(s)	338, 762, 1119, 1173, 2156
BseNI	ACTGG	4 cut(s)	40, 1255, 1581, 1776
BseRI	GAGGAG	2 cut(s)	2182, 2185
BseSI	GKGCMC	1 cut(s)	230
BseYI	CCCAGC	1 cut(s)	1207
BsgI	GTGCAG	2 cut(s)	59, 1340
Bsh1236I	CGCG	1 cut(s)	171
BshFI	GGCC	6 cut(s)	386, 1041, 1206, 1434, 1539, 1626
BshNI	GGYRCC	2 cut(s)	1301, 1565
BsiHKCI	CYCGRG	1 cut(s)	1847
BsiSI	CCGG	3 cut(s)	33, 702, 1523
BslFI	GGGAC	3 cut(s)	146, 590, 1627
BslI	CCNNNNNNNGG	4 cut(s)	1393, 1394, 1862, 2363
BsmAI	GTCTC	4 cut(s)	612, 1162, 1970, 2188
BsmFI	GGGAC	3 cut(s)	146, 590, 1627
BsmI	GAATGC	1 cut(s)	2267
BsnI	GGCC	6 cut(s)	386, 1041, 1206, 1434, 1539, 1626
BsoBI	CYCGRG	1 cut(s)	1847
Bsp1286I	GDGCHC	1 cut(s)	230
Bsp13I	TCCGGA	1 cut(s)	1522
Bsp1407I	TGTACA	1 cut(s)	1780
Bsp143I	GATC	6 cut(s)	422, 465, 894, 1141, 1531, 2236
Bsp1720I	GCTNAGC	1 cut(s)	324
BspACI	CCGC	6 cut(s)	130, 1284, 1627, 1797, 2203, 2253
BspANI	GGCC	6 cut(s)	386, 1041, 1206, 1434, 1539, 1626
BspCNI	CTCAG	5 cut(s)	337, 763, 1118, 1172, 2157
BspEI	TCCGGA	1 cut(s)	1522
BspFNI	CGCG	1 cut(s)	171
BspHI	TCATGA	2 cut(s)	610, 903
BspLI	GGNNCC	5 cut(s)	134, 135, 1303, 1567, 1625
BspMAI	CTGCAG	1 cut(s)	843
BspPI	GGATC	2 cut(s)	1539, 2231
BspQI	GCTCTTC	4 cut(s)	476, 852, 1689, 2007
BspT107I	GGYRCC	2 cut(s)	1301, 1565
BsrDI	GCAATG	2 cut(s)	435, 1500
BsrFI	RCCGGY	1 cut(s)	32
BsrGI	TGTACA	1 cut(s)	1780
BsrI	ACTGG	4 cut(s)	40, 1255, 1581, 1776
BssAI	RCCGGY	1 cut(s)	32
BssECI	CCNNGG	4 cut(s)	387, 981, 1861, 1933
BssMI	GATC	6 cut(s)	422, 465, 894, 1141, 1531, 2236
BssNI	GRCGYC	2 cut(s)	30, 1302
BssT1I	CCWWGG	2 cut(s)	387, 981
Bst2UI	CCWGG	1 cut(s)	1863
Bst4CI	ACNGT	8 cut(s)	225, 583, 760, 1036, 1267, 1429, 1920, 1934
Bst6I	CTCTTC	5 cut(s)	291, 476, 852, 1689, 2007
BstACI	GRCGYC	2 cut(s)	30, 1302
BstAPI	GCANNNNNTGC	4 cut(s)	127, 446, 1502, 2042
BstAUI	TGTACA	1 cut(s)	1780
BstBAI	YACGTR	2 cut(s)	1393, 1421
BstC8I	GCNNGC	7 cut(s)	14, 34, 843, 1223, 1360, 1491, 1898
BstDSI	CCRYGG	1 cut(s)	1933
BstEII	GGTNACC	1 cut(s)	2331
BstF5I	GGATG	1 cut(s)	2071
BstFNI	CGCG	1 cut(s)	171
BstH2I	RGCGCY	2 cut(s)	258, 1305
BstHHI	GCGC	2 cut(s)	257, 1304
BstKTI	GATC	6 cut(s)	425, 468, 897, 1144, 1534, 2239
BstMAI	GTCTC	4 cut(s)	612, 1162, 1970, 2188
BstMBI	GATC	6 cut(s)	422, 465, 894, 1141, 1531, 2236
BstNI	CCWGG	1 cut(s)	1863
BstNSI	RCATGY	3 cut(s)	478, 1944, 2324
BstPAI	GACNNNNGTC	1 cut(s)	1154
BstPI	GGTNACC	1 cut(s)	2331
BstSCI	CCNGG	2 cut(s)	700, 1861
BstSFI	CTRYAG	2 cut(s)	55, 839
BstSLI	GKGCMC	1 cut(s)	230
BstUI	CGCG	1 cut(s)	171
BstV2I	GAAGAC	1 cut(s)	1170
BstX2I	RGATCY	2 cut(s)	1531, 2236
BstXI	CCANNNNNNTGG	1 cut(s)	1771
BstYI	RGATCY	2 cut(s)	1531, 2236
BsuRI	GGCC	6 cut(s)	386, 1041, 1206, 1434, 1539, 1626
BtgI	CCRYGG	1 cut(s)	1933
BtgZI	GCGATG	1 cut(s)	2223
BtsCI	GGATG	1 cut(s)	2071
BtsIMutI	CAGTG	5 cut(s)	230, 579, 1248, 1434, 1479
Cac8I	GCNNGC	7 cut(s)	14, 34, 843, 1223, 1360, 1491, 1898
CaiI	CAGNNNCTG	1 cut(s)	1481
CciI	TCATGA	2 cut(s)	610, 903
CfoI	GCGC	2 cut(s)	257, 1304
Cfr10I	RCCGGY	1 cut(s)	32
Cfr13I	GGNCC	7 cut(s)	133, 1040, 1136, 1205, 1432, 1537, 1624
CseI	GACGC	2 cut(s)	38, 1421
Csp6I	GTAC	4 cut(s)	584, 1658, 1781, 2250
CspCI	CAANNNNNGTGG	2 cut(s)	190, 225
CviAII	CATG	8 cut(s)	463, 475, 611, 904, 1887, 1941, 2276, 2321
CviQI	GTAC	4 cut(s)	584, 1658, 1781, 2250
DinI	GGCGCC	1 cut(s)	1303
DpnI	GATC	6 cut(s)	424, 467, 896, 1143, 1533, 2238
DpnII	GATC	6 cut(s)	422, 465, 894, 1141, 1531, 2236
Eam1104I	CTCTTC	5 cut(s)	291, 476, 852, 1689, 2007
EarI	CTCTTC	5 cut(s)	291, 476, 852, 1689, 2007
Eco130I	CCWWGG	2 cut(s)	387, 981
Eco32I	GATATC	1 cut(s)	2080
Eco47I	GGWCC	2 cut(s)	133, 1136
Eco47III	AGCGCT	1 cut(s)	256
Eco57I	CTGAAG	3 cut(s)	800, 1214, 1713
Eco72I	CACGTG	1 cut(s)	1393
Eco88I	CYCGRG	1 cut(s)	1847
Eco91I	GGTNACC	1 cut(s)	2331
EcoO109I	RGGNCCY	1 cut(s)	133
EcoO65I	GGTNACC	1 cut(s)	2331
EcoRI	GAATTC	1 cut(s)	352
EcoRII	CCWGG	1 cut(s)	1861
EcoRV	GATATC	1 cut(s)	2080
EcoT14I	CCWWGG	2 cut(s)	387, 981
EcoT22I	ATGCAT	1 cut(s)	2269
EgeI	GGCGCC	1 cut(s)	1303
EheI	GGCGCC	1 cut(s)	1303
ErhI	CCWWGG	2 cut(s)	387, 981
FaeI	CATG	8 cut(s)	466, 478, 614, 907, 1890, 1944, 2279, 2324
FalI	AAGNNNNNCTT	2 cut(s)	2025, 2057
FaqI	GGGAC	3 cut(s)	146, 590, 1627
FatI	CATG	8 cut(s)	462, 474, 610, 903, 1886, 1940, 2275, 2320
FauI	CCCGC	1 cut(s)	123
FbaI	TGATCA	3 cut(s)	465, 894, 1141
FblI	GTMKAC	2 cut(s)	835, 2054
FokI	GGATG	1 cut(s)	2078
FspBI	CTAG	8 cut(s)	309, 1154, 1406, 1556, 1646, 1667, 2132, 2144
GlaI	GCGC	2 cut(s)	256, 1303
GsaI	CCCAGC	1 cut(s)	1211
GsuI	CTGGAG	3 cut(s)	812, 2253, 2367
HaeII	RGCGCY	2 cut(s)	258, 1305
HaeIII	GGCC	6 cut(s)	386, 1041, 1206, 1434, 1539, 1626
HapII	CCGG	3 cut(s)	33, 702, 1523
HgaI	GACGC	2 cut(s)	38, 1421
HhaI	GCGC	2 cut(s)	257, 1304
Hin1I	GRCGYC	2 cut(s)	30, 1302
Hin1II	CATG	8 cut(s)	466, 478, 614, 907, 1890, 1944, 2279, 2324
Hin6I	GCGC	2 cut(s)	255, 1302
HinP1I	GCGC	2 cut(s)	255, 1302
HincII	GTYRAC	1 cut(s)	2326
HindII	GTYRAC	1 cut(s)	2326
HindIII	AAGCTT	1 cut(s)	1223
HpaII	CCGG	3 cut(s)	33, 702, 1523
HphI	GGTGA	3 cut(s)	1136, 1922, 2291
Hpy166II	GTNNAC	5 cut(s)	836, 1102, 1987, 2055, 2326
Hpy8I	GTNNAC	5 cut(s)	836, 1102, 1987, 2055, 2326
HpyAV	CCTTC	5 cut(s)	1556, 1579, 1643, 1967, 2017
HpyCH4III	ACNGT	8 cut(s)	225, 583, 760, 1036, 1267, 1429, 1920, 1934
HpyCH4IV	ACGT	4 cut(s)	750, 1392, 1420, 2308
HpySE526I	ACGT	4 cut(s)	750, 1392, 1420, 2308
Hsp92I	GRCGYC	2 cut(s)	30, 1302
Hsp92II	CATG	8 cut(s)	466, 478, 614, 907, 1890, 1944, 2279, 2324
HspAI	GCGC	2 cut(s)	255, 1302
KasI	GGCGCC	1 cut(s)	1301
KflI	GGGWCCC	1 cut(s)	133
Kpn2I	TCCGGA	1 cut(s)	1522
KroI	GCCGGC	1 cut(s)	32
KroNI	GCCGGC	1 cut(s)	34
Ksp22I	TGATCA	3 cut(s)	465, 894, 1141
Kzo9I	GATC	6 cut(s)	422, 465, 894, 1141, 1531, 2236
LguI	GCTCTTC	4 cut(s)	476, 852, 1689, 2007
LmnI	GCTCC	3 cut(s)	704, 1339, 2205
LweI	GCATC	2 cut(s)	1693, 2254
MaeI	CTAG	8 cut(s)	309, 1154, 1406, 1556, 1646, 1667, 2132, 2144
MaeII	ACGT	4 cut(s)	750, 1392, 1420, 2308
MaeIII	GTNAC	6 cut(s)	139, 1477, 1675, 2139, 2279, 2331
MalI	GATC	6 cut(s)	424, 467, 896, 1143, 1533, 2238
MboI	GATC	6 cut(s)	422, 465, 894, 1141, 1531, 2236
MfeI	CAATTG	1 cut(s)	177
MflI	RGATCY	2 cut(s)	1531, 2236
MhlI	GDGCHC	1 cut(s)	230
Mly113I	GGCGCC	1 cut(s)	1302
MlyI	GAGTC	4 cut(s)	1056, 1144, 1239, 2127
MmeI	TCCRAC	5 cut(s)	703, 1114, 1222, 1597, 2043
Mph1103I	ATGCAT	1 cut(s)	2269
MroI	TCCGGA	1 cut(s)	1522
MroNI	GCCGGC	1 cut(s)	32
MseI	TTAA	7 cut(s)	113, 248, 1190, 1290, 1365, 1596, 1728
MslI	CAYNNNNRTG	2 cut(s)	473, 2016
MspI	CCGG	3 cut(s)	33, 702, 1523
MspR9I	CCNGG	2 cut(s)	702, 1863
MunI	CAATTG	1 cut(s)	177
Mva1269I	GAATGC	1 cut(s)	2267
MvaI	CCWGG	1 cut(s)	1863
MvnI	CGCG	1 cut(s)	171
NaeI	GCCGGC	1 cut(s)	34
NarI	GGCGCC	1 cut(s)	1302
NciI	CCSGG	1 cut(s)	702
NdeII	GATC	6 cut(s)	422, 465, 894, 1141, 1531, 2236
NgoMIV	GCCGGC	1 cut(s)	32
NlaIII	CATG	8 cut(s)	466, 478, 614, 907, 1890, 1944, 2279, 2324
NlaIV	GGNNCC	5 cut(s)	134, 135, 1303, 1567, 1625
NmeAIII	GCCGAG	1 cut(s)	294
NmuCI	GTSAC	2 cut(s)	1477, 2279
NsiI	ATGCAT	1 cut(s)	2269
NspI	RCATGY	3 cut(s)	478, 1944, 2324
PagI	TCATGA	2 cut(s)	610, 903
PciI	ACATGT	1 cut(s)	474
PciSI	GCTCTTC	4 cut(s)	476, 852, 1689, 2007
PcsI	WCGNNNNNNNCGW	1 cut(s)	1930
PctI	GAATGC	1 cut(s)	2267
PdiI	GCCGGC	1 cut(s)	34
PfeI	GAWTC	6 cut(s)	95, 545, 787, 1121, 1823, 2161
PflFI	GACNNNGTC	2 cut(s)	1169, 1920
PfoI	TCCNGGA	1 cut(s)	700
PleI	GAGTC	4 cut(s)	1056, 1144, 1239, 2126
PluTI	GGCGCC	1 cut(s)	1305
PmaCI	CACGTG	1 cut(s)	1393
PmlI	CACGTG	1 cut(s)	1393
PpsI	GAGTC	4 cut(s)	1056, 1144, 1239, 2126
Ppu21I	YACGTR	2 cut(s)	1393, 1421
PpuMI	RGGWCCY	1 cut(s)	133
PscI	ACATGT	1 cut(s)	474
PshAI	GACNNNNGTC	1 cut(s)	1154
Psp1406I	AACGTT	1 cut(s)	750
Psp5II	RGGWCCY	1 cut(s)	133
Psp6I	CCWGG	1 cut(s)	1861
PspCI	CACGTG	1 cut(s)	1393
PspEI	GGTNACC	1 cut(s)	2331
PspFI	CCCAGC	1 cut(s)	1207
PspGI	CCWGG	1 cut(s)	1861
PspN4I	GGNNCC	5 cut(s)	134, 135, 1303, 1567, 1625
PspPI	GGNCC	7 cut(s)	133, 1040, 1136, 1205, 1432, 1537, 1624
PspPPI	RGGWCCY	1 cut(s)	133
PstI	CTGCAG	1 cut(s)	843
PstNI	CAGNNNCTG	1 cut(s)	1481
PsuI	RGATCY	2 cut(s)	1531, 2236
PsyI	GACNNNGTC	2 cut(s)	1169, 1920
RsaI	GTAC	4 cut(s)	585, 1659, 1782, 2251
RsaNI	GTAC	4 cut(s)	584, 1658, 1781, 2250
RseI	CAYNNNNRTG	2 cut(s)	473, 2016
SapI	GCTCTTC	4 cut(s)	476, 852, 1689, 2007
SaqAI	TTAA	7 cut(s)	113, 248, 1190, 1290, 1365, 1596, 1728
Sau3AI	GATC	6 cut(s)	422, 465, 894, 1141, 1531, 2236
Sau96I	GGNCC	7 cut(s)	133, 1040, 1136, 1205, 1432, 1537, 1624
SchI	GAGTC	4 cut(s)	1056, 1144, 1239, 2127
ScrFI	CCNGG	2 cut(s)	702, 1863
SduI	GDGCHC	1 cut(s)	230
SfaNI	GCATC	2 cut(s)	1693, 2254
SfcI	CTRYAG	2 cut(s)	55, 839
SfoI	GGCGCC	1 cut(s)	1303
SinI	GGWCC	2 cut(s)	133, 1136
SmiMI	CAYNNNNRTG	2 cut(s)	473, 2016
SsiI	CCGC	6 cut(s)	130, 1284, 1627, 1797, 2203, 2253
SspDI	GGCGCC	1 cut(s)	1301
SspI	AATATT	3 cut(s)	564, 1096, 1471
SspMI	CTAG	8 cut(s)	309, 1154, 1406, 1556, 1646, 1667, 2132, 2144
StyD4I	CCNGG	2 cut(s)	700, 1861
StyI	CCWWGG	2 cut(s)	387, 981
TaaI	ACNGT	8 cut(s)	225, 583, 760, 1036, 1267, 1429, 1920, 1934
TaiI	ACGT	4 cut(s)	753, 1395, 1423, 2311
TaqI	TCGA	4 cut(s)	356, 1215, 2082, 2287
TatI	WGTACW	1 cut(s)	1780
TauI	GCSGC	3 cut(s)	1286, 1629, 1799
TfiI	GAWTC	6 cut(s)	95, 545, 787, 1121, 1823, 2161
Tru1I	TTAA	7 cut(s)	113, 248, 1190, 1290, 1365, 1596, 1728
Tru9I	TTAA	7 cut(s)	113, 248, 1190, 1290, 1365, 1596, 1728
TscAI	CASTG	5 cut(s)	230, 586, 1255, 1434, 1486
TseFI	GTSAC	2 cut(s)	1477, 2279
Tsp45I	GTSAC	2 cut(s)	1477, 2279
TspDTI	ATGAA	8 cut(s)	87, 330, 669, 876, 951, 1575, 1735, 2238
TspGWI	ACGGA	1 cut(s)	2167
TspRI	CASTG	5 cut(s)	230, 586, 1255, 1434, 1486
Tth111I	GACNNNGTC	2 cut(s)	1169, 1920
VpaK11BI	GGWCC	2 cut(s)	133, 1136
XapI	RAATTY	6 cut(s)	217, 352, 858, 957, 1831, 1841
XbaI	TCTAGA	2 cut(s)	1645, 2131
XceI	RCATGY	3 cut(s)	478, 1944, 2324
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1312
XmiI	GTMKAC	2 cut(s)	835, 2054
XspI	CTAG	8 cut(s)	309, 1154, 1406, 1556, 1646, 1667, 2132, 2144
Zsp2I	ATGCAT	1 cut(s)	2269

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.