Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0008636

Physical Location & Seq

Genomic Coordinates Forward (+)

17139875 .. 17144185

Gene Structure 4311 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g25630.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2442 bp

ATGGCTGAAAGCTGGCATGGGAATTATGACACCGGCAGCCAGTCAGATGACAGCTATAGATTTGAGAGACTGCACATTGAGCCTATTTATGATTCATTCTTTTGCCCTTTAACCAAGCAAGTTATGCGCGACCCCGTTACTTTAGAAAATGGGCAAACTTTTGAGCGCGAAGCAATTGAAAATTGGTTCAGGGAGTGCAGGGAGAGTGGAAGGAGCTTACAGTGTCCACTCACACTAAAAGATCTAAAAAGCACTGATTTGAAGCCTAGCATAGCTTTGCGAAACACCATTGAAGAGTGGAGTGCTAGGAATGAAGCCGCTCAGCTTGATATGGCTCGTAAATCACTAAATTTGAGCAGTTCAGAAGGTGATATTCTTTTGGCCTTGGAGTATGTCCAGCAAATCTGCAAGAAAAGCAGATCAAATAAGCACATTGCACGAAATGCCGGACTGTTACCCATGATCATTGACATGATGAAGAGCAGCAGTCGTAGAGTTAGGTGTAAATCTTTGGACACCCTACGAATTGTTGTGGAGGACGATTCTGAAAATAAGGAAATATTGGCAGATGGGGACACCGTACGCTCAATAGTGAAGTTCTTGTCTCATGAGCAATCTAAGGAGAGGGAGGAAGCTGTCTCGTTGCTATATGAACTATCCAAATCCGAAGCCCTATGTGAGAAGATTGGTTCAATTCCCGGAGCAATTCTTATGTTGGTTGGAATGACAAGCAGCAAGTCAGATAACATTTTGACTGTTGAGAAAGCTGAGAAAACACTAGAGAATCTGGAGAAATGTGAGAACAACGTGCTACAGATGGCAGAAAATGGTAGACTGCAGCCTCTTCTGACACAAATTCTTGAAGGCCCTCCAGAAACTAAGTTATCAATGTCTAATTTCCTTGGTGAATTAGTTTTGGATAATGATGTCAAGGTCCTGGTGGCTAAAAGTCTGGGTTCATCTTTGATCAATATTATGAGAAGTGGTAATATGCAGTCAAGAGAAGCTGCCTTGAAAGCTCTTAACCAAATTTCATCTTGTGAGGCAAGTGCCAAGGTACTGATAGAAGCAGGGATACTTCCTTCTCTGGTCAAAGACCTCTTTACTGTTGGCCCTCATCAACTTCCTATGCGACTTAAAGAGGTTGCTGCAACAATTCTTGCTAATATTGTTATCTCTGAGTGTGACTTTGATTCGATATTAGTTGGACCTGATGACCAAACACTAGTCTCAGAAGACATAGTCCATAACCTGCTACATCTAATTAGCAACACAGGACCAGCAATCTCATGCAAGCTTCTTCAGGTTCTTGTTGGACTCACTAGCTCTCCCTCTACAGTTCTGAGTGTTGTTTCCGCCATTAAAAGCTCTGGCGCCATTATTAGTTTGGTGCAGTTTATTGAAGCTCCACAAAAGGAGTTGCGTGTGCCTTCCATTAAACTTCTCCAGAACCTCTCCCCAGACTTGGGTCAGGAACTAGCTGATGCTCTACGTGGCACAGTGGGCCAACTTGGCAGCCTGATTAAAGTGATATCAGAAAATATTTCAATCACTGAAGAGCAAGCAGCAGCCATTGGCCTCTTGGCTGAACTTCCAGAGAGGGATCTGGGACTTGCCCGACAAATGCTAGATGAAGGTGCCTTCCAGCTGGTGTTTTCCAGAGTAGTTAAGATCCGACAAGGAGGGACTAAGGGGGGCCGCTTTGTCACACCATTTTTAGAAGGCCTTGTACGGGTTCTAGCAAGGGTTACGCTTGTTTTGGCTGATGAGCAAGCTGCAGTTGCACTCTGCCGTGAGCTTAATGTTGCTGCCCTTTTCATTGAACTTCTTCAATCCAATGGACTGGACAATGTACAGATGAGTTCTGCTGCAGCATTGGAGAACTTATCAGAAGAATCCAAAAATTTGACAAGGTTTCCGGAGTTGCCTACCCCTGGTGTTTGTGGCTCAATTTTCCCATGCTTTGGTAAGCAACCTACCATAAATGGACTATGTCGGCTTCACCGTGGGATGTGCTCGCTTAGAGAAAGTTTTTGTCTCTTGGAAGGACAGGCTGTGGACAAACTGGTAGCTCTTCTTGACCACACAAATGAGAAGGTGGTCGAAGCAGCCCTTGCAGCATTGTCTACTTTGTTGGATGATGGTGTTGATCTCGAACAAGGGGTTTTAGTGTTGTGTGAAGCAGAGGGAGTCAGACCCATTCTGGATGTGTTATTAGAGAAACGGACAGAGAATCTGAGGAGGAGAGCAGTTTGGGTAGTTGAAAGACTCTTGCGGAGTGATGAGATAGCCTATGAAGTATCTGGAGATCCAAATGTGAGTACTGCACTTGTTGATGCATTCCAGCATGGTGACTATCGAACCCGACAGATTGCTGAACGTGCTCTGAAGCATGTTGACAGGTTACCAAACTTCTCTGGAGTGTTTCCAAATGTAGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006807 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0009889 GO:0009890 GO:0009892 GO:0009894 GO:0009987 GO:0010115 GO:0010150 GO:0010271 GO:0010380 GO:0010565 GO:0016020 GO:0016567 GO:0016740 GO:0019216 GO:0019222 GO:0019538 GO:0019747 GO:0019787 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031329 GO:0032446 GO:0032501 GO:0032502 GO:0033612 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043455 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045827 GO:0045833 GO:0046890 GO:0048366 GO:0048367 GO:0048519 GO:0048523 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051055 GO:0051171 GO:0051193 GO:0062012 GO:0062014 GO:0065007 GO:0070647 GO:0070696 GO:0071704 GO:0071944 GO:0080090 GO:0090056 GO:0090359 GO:0090693 GO:0099402 GO:0140096 GO:1901401 GO:1901404 GO:1901463 GO:1901564 GO:1902930 GO:1902931

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

814

Amino Acids

89.21

Weight (kDa)

5.15

Isoelectric Point (pI)

46.08

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008636)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20780 AT1G20780 AT1G20780 AT1G76390 AT1G76390
fragaria_vesca	FvH4_5g25630 FvH4_5g25630
malus_domestica	MD00G1113800.v1.1 MD06G1007200.v1.1
prunus_persica	Prupe.5G009100_v2.0.a1 Prupe.5G009100_v2.0.a1
pyrus_communis	pycom06g00630 pycom16g26080
rosa_chinensis	RchiOBHm_Chr7g0215921
rosa_laevigata	RLG00000002607
rosa_multiflora	Rmu_sc0006240.1_g000004
rosa_roxburghii	Rroxscaffold_3G00243800
rosa_rugosa	Rorug07G0156800
rosa_samantha	Rh7AG294900 Rh7BG286900 Rh7CG315000 Rh7DG297700
rosa_wichuraiana	Rw7G025050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1260
AccB1I	GGYRCC	2 cut(s)	1373, 1637
AccB7I	CCANNNNNTGG	1 cut(s)	1964
AccBSI	CCGCTC	1 cut(s)	320
AccI	GTMKAC	2 cut(s)	832, 2126
AccII	CGCG	2 cut(s)	129, 168
AccIII	TCCGGA	1 cut(s)	1918
AciI	CCGC	4 cut(s)	318, 1356, 1699, 2275
AclWI	GGATC	3 cut(s)	1611, 1666, 2303
AcsI	RAATTY	4 cut(s)	349, 855, 1029, 1903
AcuI	CTGAAG	3 cut(s)	1286, 1575, 2408
AcyI	GRCGYC	1 cut(s)	1374
AfaI	GTAC	5 cut(s)	582, 1059, 1731, 1854, 2323
AfiI	CCNNNNNNNGG	6 cut(s)	1465, 1466, 1732, 1934, 1964, 2435
AhlI	ACTAGT	1 cut(s)	1225
AjnI	CCWGG	2 cut(s)	936, 1933
Alw21I	GWGCWC	2 cut(s)	2018, 2386
Alw26I	GTCTC	5 cut(s)	61, 609, 643, 1234, 2042
AlwI	GGATC	3 cut(s)	1611, 1666, 2303
Aor13HI	TCCGGA	1 cut(s)	1918
AoxI	GGCC	7 cut(s)	381, 865, 1111, 1504, 1576, 1696, 1723
ApoI	RAATTY	4 cut(s)	349, 855, 1029, 1903
Asp700I	GAANNNNTTC	1 cut(s)	1827
AspLEI	GCGC	3 cut(s)	129, 168, 1376
AspS9I	GGNCC	7 cut(s)	866, 934, 1112, 1208, 1277, 1504, 1696
AsuC2I	CCSGG	1 cut(s)	699
AsuHPI	GGTGA	4 cut(s)	380, 917, 1994, 2363
AvaII	GGWCC	3 cut(s)	934, 1208, 1277
BanI	GGYRCC	2 cut(s)	1373, 1637
BarI	GAAGNNNNNNTAC	4 cut(s)	1059, 1091, 1713, 1745
BbsI	GAAGAC	1 cut(s)	1242
Bbv12I	GWGCWC	2 cut(s)	2018, 2386
BccI	CCATC	3 cut(s)	563, 811, 2135
BceAI	ACGGC	1 cut(s)	1776
BciT130I	CCWGG	2 cut(s)	938, 1935
BciVI	GTATCC	1 cut(s)	1068
BclI	TGATCA	2 cut(s)	462, 966
BcnI	CCSGG	1 cut(s)	699
BcoDI	GTCTC	5 cut(s)	61, 609, 643, 1234, 2042
BcuI	ACTAGT	1 cut(s)	1225
BfaI	CTAG	8 cut(s)	267, 306, 779, 1226, 1323, 1478, 1628, 1739
BfmI	CTRYAG	6 cut(s)	55, 812, 836, 1335, 1776, 1869
BfoI	RGCGCY	1 cut(s)	1377
BfuAI	ACCTGC	1 cut(s)	1260
BfuI	GTATCC	1 cut(s)	1068
BglI	GCCNNNNNGGC	1 cut(s)	1512
BglII	AGATCT	1 cut(s)	241
BlpI	GCTNAGC	1 cut(s)	321
BmcAI	AGTACT	1 cut(s)	2323
Bme1390I	CCNGG	3 cut(s)	699, 938, 1935
Bme18I	GGWCC	3 cut(s)	934, 1208, 1277
BmgT120I	GGNCC	7 cut(s)	866, 934, 1112, 1208, 1277, 1504, 1696
BmiI	GGNNCC	3 cut(s)	1375, 1639, 1697
BmrFI	CCNGG	3 cut(s)	699, 938, 1935
BmsI	GCATC	2 cut(s)	1474, 2326
BoxI	GACNNNNGTC	1 cut(s)	1467
BpiI	GAAGAC	1 cut(s)	1242
BpmI	CTGGAG	5 cut(s)	809, 855, 1430, 2325, 2439
Bpu1102I	GCTNAGC	1 cut(s)	321
BpuMI	CCSGG	1 cut(s)	699
BsaAI	YACGTR	1 cut(s)	1493
BsaHI	GRCGYC	1 cut(s)	1374
BsaJI	CCNNGG	5 cut(s)	384, 901, 1053, 1933, 2005
BsaWI	WCCGGW	1 cut(s)	1918
BsaXI	ACNNNNNCTCC	2 cut(s)	1312, 1342
Bsc4I	CCNNNNNNNGG	6 cut(s)	1465, 1466, 1732, 1934, 1964, 2435
Bse118I	RCCGGY	1 cut(s)	32
Bse1I	ACTGG	3 cut(s)	40, 1848, 2070
Bse3DI	GCAATG	1 cut(s)	432
BseAI	TCCGGA	1 cut(s)	1918
BseBI	CCWGG	2 cut(s)	938, 1935
BseDI	CCNNGG	5 cut(s)	384, 901, 1053, 1933, 2005
BseGI	GGATG	3 cut(s)	2016, 2143, 2212
BseLI	CCNNNNNNNGG	6 cut(s)	1465, 1466, 1732, 1934, 1964, 2435
BseMI	GCAATG	1 cut(s)	432
BseMII	CTCAG	6 cut(s)	335, 759, 1170, 1245, 1334, 2228
BseNI	ACTGG	3 cut(s)	40, 1848, 2070
BseRI	GAGGAG	2 cut(s)	2254, 2257
BsgI	GTGCAG	4 cut(s)	56, 217, 1412, 2310
Bsh1236I	CGCG	2 cut(s)	129, 168
BshFI	GGCC	7 cut(s)	383, 867, 1113, 1506, 1578, 1698, 1725
BshNI	GGYRCC	2 cut(s)	1373, 1637
BsiHKAI	GWGCWC	2 cut(s)	2018, 2386
BsiSI	CCGG	4 cut(s)	33, 447, 699, 1919
BsiWI	CGTACG	1 cut(s)	580
BslFI	GGGAC	3 cut(s)	587, 1623, 1699
BslI	CCNNNNNNNGG	6 cut(s)	1465, 1466, 1732, 1934, 1964, 2435
BsmAI	GTCTC	5 cut(s)	61, 609, 643, 1234, 2042
BsmFI	GGGAC	3 cut(s)	587, 1623, 1699
BsmI	GAATGC	1 cut(s)	2339
BsnI	GGCC	7 cut(s)	383, 867, 1113, 1506, 1578, 1698, 1725
Bsp1286I	GDGCHC	2 cut(s)	2018, 2386
Bsp13I	TCCGGA	1 cut(s)	1918
Bsp1407I	TGTACA	1 cut(s)	1852
Bsp143I	GATC	8 cut(s)	241, 419, 462, 966, 1603, 1671, 2149, 2308
Bsp1720I	GCTNAGC	1 cut(s)	321
BspACI	CCGC	4 cut(s)	318, 1356, 1699, 2275
BspANI	GGCC	7 cut(s)	383, 867, 1113, 1506, 1578, 1698, 1725
BspCNI	CTCAG	6 cut(s)	334, 760, 1171, 1244, 1335, 2229
BspEI	TCCGGA	1 cut(s)	1918
BspFNI	CGCG	2 cut(s)	129, 168
BspHI	TCATGA	1 cut(s)	607
BspLI	GGNNCC	3 cut(s)	1375, 1639, 1697
BspMAI	CTGCAG	3 cut(s)	840, 1780, 1873
BspMI	ACCTGC	1 cut(s)	1260
BspPI	GGATC	3 cut(s)	1611, 1666, 2303
BspQI	GCTCTTC	3 cut(s)	473, 1551, 2079
BspT107I	GGYRCC	2 cut(s)	1373, 1637
BsrBI	CCGCTC	1 cut(s)	320
BsrDI	GCAATG	1 cut(s)	432
BsrFI	RCCGGY	1 cut(s)	32
BsrGI	TGTACA	1 cut(s)	1852
BsrI	ACTGG	3 cut(s)	40, 1848, 2070
BssAI	RCCGGY	1 cut(s)	32
BssECI	CCNNGG	5 cut(s)	384, 901, 1053, 1933, 2005
BssMI	GATC	8 cut(s)	241, 419, 462, 966, 1603, 1671, 2149, 2308
BssNI	GRCGYC	1 cut(s)	1374
BssT1I	CCWWGG	3 cut(s)	384, 901, 1053
Bst2UI	CCWGG	2 cut(s)	938, 1935
Bst4CI	ACNGT	8 cut(s)	222, 453, 580, 757, 1108, 1339, 1501, 2006
Bst6I	CTCTTC	5 cut(s)	288, 473, 849, 1551, 2079
BstACI	GRCGYC	1 cut(s)	1374
BstAPI	GCANNNNNTGC	3 cut(s)	124, 443, 2114
BstAUI	TGTACA	1 cut(s)	1852
BstBAI	YACGTR	1 cut(s)	1493
BstC8I	GCNNGC	5 cut(s)	14, 1295, 1563, 1773, 2018
BstDSI	CCRYGG	1 cut(s)	2005
BstEII	GGTNACC	1 cut(s)	2403
BstF5I	GGATG	3 cut(s)	2016, 2143, 2212
BstFNI	CGCG	2 cut(s)	129, 168
BstH2I	RGCGCY	1 cut(s)	1377
BstHHI	GCGC	3 cut(s)	129, 168, 1376
BstKTI	GATC	8 cut(s)	244, 422, 465, 969, 1606, 1674, 2152, 2311
BstMAI	GTCTC	5 cut(s)	61, 609, 643, 1234, 2042
BstMBI	GATC	8 cut(s)	241, 419, 462, 966, 1603, 1671, 2149, 2308
BstNI	CCWGG	2 cut(s)	938, 1935
BstNSI	RCATGY	1 cut(s)	2396
BstPAI	GACNNNNGTC	1 cut(s)	1467
BstPI	GGTNACC	1 cut(s)	2403
BstSCI	CCNGG	3 cut(s)	697, 936, 1933
BstSFI	CTRYAG	6 cut(s)	55, 812, 836, 1335, 1776, 1869
BstUI	CGCG	2 cut(s)	129, 168
BstV2I	GAAGAC	1 cut(s)	1242
BstX2I	RGATCY	4 cut(s)	241, 1603, 1671, 2308
BstXI	CCANNNNNNTGG	1 cut(s)	1843
BstYI	RGATCY	4 cut(s)	241, 1603, 1671, 2308
BsuI	GTATCC	1 cut(s)	1068
BsuRI	GGCC	7 cut(s)	383, 867, 1113, 1506, 1578, 1698, 1725
BtgI	CCRYGG	1 cut(s)	2005
BtsCI	GGATG	3 cut(s)	2016, 2143, 2212
BtsIMutI	CAGTG	4 cut(s)	227, 252, 1506, 1551
BveI	ACCTGC	1 cut(s)	1260
Cac8I	GCNNGC	5 cut(s)	14, 1295, 1563, 1773, 2018
CciI	TCATGA	1 cut(s)	607
CfoI	GCGC	3 cut(s)	129, 168, 1376
Cfr10I	RCCGGY	1 cut(s)	32
Cfr13I	GGNCC	7 cut(s)	866, 934, 1112, 1208, 1277, 1504, 1696
Csp6I	GTAC	5 cut(s)	581, 1058, 1730, 1853, 2322
CviAII	CATG	8 cut(s)	17, 460, 472, 608, 1290, 1959, 2348, 2393
CviQI	GTAC	5 cut(s)	581, 1058, 1730, 1853, 2322
DinI	GGCGCC	1 cut(s)	1375
DpnI	GATC	8 cut(s)	243, 421, 464, 968, 1605, 1673, 2151, 2310
DpnII	GATC	8 cut(s)	241, 419, 462, 966, 1603, 1671, 2149, 2308
Eam1104I	CTCTTC	5 cut(s)	288, 473, 849, 1551, 2079
EarI	CTCTTC	5 cut(s)	288, 473, 849, 1551, 2079
EciI	GGCGGA	1 cut(s)	1345
Eco130I	CCWWGG	3 cut(s)	384, 901, 1053
Eco147I	AGGCCT	1 cut(s)	1725
Eco32I	GATATC	1 cut(s)	1533
Eco47I	GGWCC	3 cut(s)	934, 1208, 1277
Eco57I	CTGAAG	3 cut(s)	1286, 1575, 2408
Eco91I	GGTNACC	1 cut(s)	2403
EcoO109I	RGGNCCY	2 cut(s)	866, 934
EcoO65I	GGTNACC	1 cut(s)	2403
EcoRII	CCWGG	2 cut(s)	936, 1933
EcoRV	GATATC	1 cut(s)	1533
EcoT14I	CCWWGG	3 cut(s)	384, 901, 1053
EcoT22I	ATGCAT	1 cut(s)	2341
EgeI	GGCGCC	1 cut(s)	1375
EheI	GGCGCC	1 cut(s)	1375
ErhI	CCWWGG	3 cut(s)	384, 901, 1053
FaeI	CATG	8 cut(s)	20, 463, 475, 611, 1293, 1962, 2351, 2396
FalI	AAGNNNNNCTT	2 cut(s)	2097, 2129
FaqI	GGGAC	3 cut(s)	587, 1623, 1699
FatI	CATG	8 cut(s)	16, 459, 471, 607, 1289, 1958, 2347, 2392
FbaI	TGATCA	2 cut(s)	462, 966
FblI	GTMKAC	2 cut(s)	832, 2126
FokI	GGATG	3 cut(s)	2023, 2150, 2219
FspBI	CTAG	8 cut(s)	267, 306, 779, 1226, 1323, 1478, 1628, 1739
GlaI	GCGC	3 cut(s)	128, 167, 1375
GsuI	CTGGAG	5 cut(s)	809, 855, 1430, 2325, 2439
HaeII	RGCGCY	1 cut(s)	1377
HaeIII	GGCC	7 cut(s)	383, 867, 1113, 1506, 1578, 1698, 1725
HapII	CCGG	4 cut(s)	33, 447, 699, 1919
HhaI	GCGC	3 cut(s)	129, 168, 1376
Hin1I	GRCGYC	1 cut(s)	1374
Hin1II	CATG	8 cut(s)	20, 463, 475, 611, 1293, 1962, 2351, 2396
Hin6I	GCGC	3 cut(s)	127, 166, 1374
HinP1I	GCGC	3 cut(s)	127, 166, 1374
HincII	GTYRAC	1 cut(s)	2398
HindII	GTYRAC	1 cut(s)	2398
HindIII	AAGCTT	1 cut(s)	1295
HinfI	GANTC	9 cut(s)	92, 542, 784, 1193, 1317, 1895, 2190, 2233, 2268
HpaII	CCGG	4 cut(s)	33, 447, 699, 1919
HphI	GGTGA	4 cut(s)	380, 917, 1994, 2363
Hpy166II	GTNNAC	5 cut(s)	227, 833, 2059, 2127, 2398
Hpy8I	GTNNAC	5 cut(s)	227, 833, 2059, 2127, 2398
HpyCH4III	ACNGT	8 cut(s)	222, 453, 580, 757, 1108, 1339, 1501, 2006
HpyCH4IV	ACGT	3 cut(s)	807, 1492, 2380
HpySE526I	ACGT	3 cut(s)	807, 1492, 2380
Hsp92I	GRCGYC	1 cut(s)	1374
Hsp92II	CATG	8 cut(s)	20, 463, 475, 611, 1293, 1962, 2351, 2396
HspAI	GCGC	3 cut(s)	127, 166, 1374
KasI	GGCGCC	1 cut(s)	1373
Kpn2I	TCCGGA	1 cut(s)	1918
Ksp22I	TGATCA	2 cut(s)	462, 966
Kzo9I	GATC	8 cut(s)	241, 419, 462, 966, 1603, 1671, 2149, 2308
LguI	GCTCTTC	3 cut(s)	473, 1551, 2079
LmnI	GCTCC	3 cut(s)	213, 701, 1411
LweI	GCATC	2 cut(s)	1474, 2326
MaeI	CTAG	8 cut(s)	267, 306, 779, 1226, 1323, 1478, 1628, 1739
MaeII	ACGT	3 cut(s)	807, 1492, 2380
MaeIII	GTNAC	7 cut(s)	136, 453, 1184, 1705, 1747, 2351, 2403
MalI	GATC	8 cut(s)	243, 421, 464, 968, 1605, 1673, 2151, 2310
MbiI	CCGCTC	1 cut(s)	320
MboI	GATC	8 cut(s)	241, 419, 462, 966, 1603, 1671, 2149, 2308
MfeI	CAATTG	1 cut(s)	174
MflI	RGATCY	4 cut(s)	241, 1603, 1671, 2308
MhlI	GDGCHC	2 cut(s)	2018, 2386
Mly113I	GGCGCC	1 cut(s)	1374
MlyI	GAGTC	3 cut(s)	1311, 2199, 2262
MmeI	TCCRAC	5 cut(s)	700, 1186, 1294, 1699, 2115
Mph1103I	ATGCAT	1 cut(s)	2341
MroI	TCCGGA	1 cut(s)	1918
MroXI	GAANNNNTTC	1 cut(s)	1827
MseI	TTAA	8 cut(s)	110, 1023, 1137, 1362, 1437, 1524, 1668, 1800
MslI	CAYNNNNRTG	2 cut(s)	470, 2088
MspA1I	CMGCKG	1 cut(s)	1648
MspI	CCGG	4 cut(s)	33, 447, 699, 1919
MspR9I	CCNGG	3 cut(s)	699, 938, 1935
MunI	CAATTG	1 cut(s)	174
Mva1269I	GAATGC	1 cut(s)	2339
MvaI	CCWGG	2 cut(s)	938, 1935
MvnI	CGCG	2 cut(s)	129, 168
NarI	GGCGCC	1 cut(s)	1374
NciI	CCSGG	1 cut(s)	699
NdeII	GATC	8 cut(s)	241, 419, 462, 966, 1603, 1671, 2149, 2308
NlaIII	CATG	8 cut(s)	20, 463, 475, 611, 1293, 1962, 2351, 2396
NlaIV	GGNNCC	3 cut(s)	1375, 1639, 1697
NmuCI	GTSAC	3 cut(s)	1184, 1705, 2351
NsiI	ATGCAT	1 cut(s)	2341
NspI	RCATGY	1 cut(s)	2396
PagI	TCATGA	1 cut(s)	607
PceI	AGGCCT	1 cut(s)	1725
PciSI	GCTCTTC	3 cut(s)	473, 1551, 2079
PcsI	WCGNNNNNNNCGW	1 cut(s)	2002
PctI	GAATGC	1 cut(s)	2339
PdmI	GAANNNNTTC	1 cut(s)	1827
PfeI	GAWTC	6 cut(s)	92, 542, 784, 1193, 1895, 2233
Pfl23II	CGTACG	1 cut(s)	580
PflFI	GACNNNGTC	2 cut(s)	1241, 1992
PflMI	CCANNNNNTGG	1 cut(s)	1964
PfoI	TCCNGGA	1 cut(s)	697
PleI	GAGTC	3 cut(s)	1311, 2198, 2262
PluTI	GGCGCC	1 cut(s)	1377
PpsI	GAGTC	3 cut(s)	1311, 2198, 2262
Ppu21I	YACGTR	1 cut(s)	1493
PpuMI	RGGWCCY	1 cut(s)	934
PshAI	GACNNNNGTC	1 cut(s)	1467
Psp5II	RGGWCCY	1 cut(s)	934
Psp6I	CCWGG	2 cut(s)	936, 1933
PspEI	GGTNACC	1 cut(s)	2403
PspGI	CCWGG	2 cut(s)	936, 1933
PspLI	CGTACG	1 cut(s)	580
PspN4I	GGNNCC	3 cut(s)	1375, 1639, 1697
PspPI	GGNCC	7 cut(s)	866, 934, 1112, 1208, 1277, 1504, 1696
PspPPI	RGGWCCY	1 cut(s)	934
PstI	CTGCAG	3 cut(s)	840, 1780, 1873
PsuI	RGATCY	4 cut(s)	241, 1603, 1671, 2308
PsyI	GACNNNGTC	2 cut(s)	1241, 1992
PvuII	CAGCTG	1 cut(s)	1648
RsaI	GTAC	5 cut(s)	582, 1059, 1731, 1854, 2323
RsaNI	GTAC	5 cut(s)	581, 1058, 1730, 1853, 2322
RseI	CAYNNNNRTG	2 cut(s)	470, 2088
SapI	GCTCTTC	3 cut(s)	473, 1551, 2079
SaqAI	TTAA	8 cut(s)	110, 1023, 1137, 1362, 1437, 1524, 1668, 1800
Sau3AI	GATC	8 cut(s)	241, 419, 462, 966, 1603, 1671, 2149, 2308
Sau96I	GGNCC	7 cut(s)	866, 934, 1112, 1208, 1277, 1504, 1696
ScaI	AGTACT	1 cut(s)	2323
SchI	GAGTC	3 cut(s)	1311, 2199, 2262
ScrFI	CCNGG	3 cut(s)	699, 938, 1935
SduI	GDGCHC	2 cut(s)	2018, 2386
SfaNI	GCATC	2 cut(s)	1474, 2326
SfcI	CTRYAG	6 cut(s)	55, 812, 836, 1335, 1776, 1869
SfoI	GGCGCC	1 cut(s)	1375
SinI	GGWCC	3 cut(s)	934, 1208, 1277
SmiMI	CAYNNNNRTG	2 cut(s)	470, 2088
SpeI	ACTAGT	1 cut(s)	1225
SseBI	AGGCCT	1 cut(s)	1725
SsiI	CCGC	4 cut(s)	318, 1356, 1699, 2275
SspDI	GGCGCC	1 cut(s)	1373
SspI	AATATT	4 cut(s)	561, 973, 1168, 1543
SspMI	CTAG	8 cut(s)	267, 306, 779, 1226, 1323, 1478, 1628, 1739
StuI	AGGCCT	1 cut(s)	1725
StyD4I	CCNGG	3 cut(s)	697, 936, 1933
StyI	CCWWGG	3 cut(s)	384, 901, 1053
TaaI	ACNGT	8 cut(s)	222, 453, 580, 757, 1108, 1339, 1501, 2006
TaiI	ACGT	3 cut(s)	810, 1495, 2383
TaqI	TCGA	4 cut(s)	1196, 2103, 2154, 2359
TatI	WGTACW	2 cut(s)	1852, 2321
TauI	GCSGC	2 cut(s)	320, 1701
TfiI	GAWTC	6 cut(s)	92, 542, 784, 1193, 1895, 2233
Tru1I	TTAA	8 cut(s)	110, 1023, 1137, 1362, 1437, 1524, 1668, 1800
Tru9I	TTAA	8 cut(s)	110, 1023, 1137, 1362, 1437, 1524, 1668, 1800
TscAI	CASTG	4 cut(s)	227, 259, 1506, 1558
TseFI	GTSAC	3 cut(s)	1184, 1705, 2351
Tsp45I	GTSAC	3 cut(s)	1184, 1705, 2351
TspDTI	ATGAA	9 cut(s)	84, 327, 491, 666, 948, 1023, 1647, 1807, 2310
TspGWI	ACGGA	1 cut(s)	2239
TspRI	CASTG	4 cut(s)	227, 259, 1506, 1558
Tth111I	GACNNNGTC	2 cut(s)	1241, 1992
Van91I	CCANNNNNTGG	1 cut(s)	1964
VpaK11BI	GGWCC	3 cut(s)	934, 1208, 1277
XapI	RAATTY	4 cut(s)	349, 855, 1029, 1903
XceI	RCATGY	1 cut(s)	2396
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1384, 1579
XmiI	GTMKAC	2 cut(s)	832, 2126
XmnI	GAANNNNTTC	1 cut(s)	1827
XspI	CTAG	8 cut(s)	267, 306, 779, 1226, 1323, 1478, 1628, 1739
ZrmI	AGTACT	1 cut(s)	2323
Zsp2I	ATGCAT	1 cut(s)	2341

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.