Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009290

Physical Location & Seq

Genomic Coordinates Reverse (-)

28780408 .. 28783257

Gene Structure 2850 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G76700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1197 bp

ATGGTTAAGGAAACAGAGTACTACGATGTGCTCGGAGTTAGCCCAACTGCTACAGAATCTGAGATTAAGAAAGCTTACTACATAAAGGCACGCCAAGTTCATCCTGATAAGAACCCTAATGATCCTCAAGCTGCACACAATTTCCAGGTCTTGGGAGAGGCCTATCAAGTGCTAAGTGATTCAGGACAACGCCAAGCTTATGATGCATGTGGCAAGTCAGGAATCTCAACTGATGCAATCATCGATCCTGCTGCAATATTTGCAATGCTATTTGGCAGCGAACTTTTTGAAGGGTACATAGGACAGCTTGCTATGGCATCTATGGCTTCACTTGATATCTTCACGGAAGGGGATCAGTTTGATACCAAAAAGATACAAGAAAAATTGAGGATTGTTCAGAAAGAAAGAGAAGACAAGCTTGCTCAGATTCTGAAAGACCGACTCAACGAATATGTAATAAACAAAGACGAATTTATCAGTAATGCTGAAGCTGAAGTAGCAAGACTCTCAAATGCAGCTTATGGTGTGGATATGTTGAATACAATTGGGTATATATATGTAAGACAAGCAGCAAAAGAGCTAGGGAAGAAAGCTATTTATCTCGGAGTACCATTCATTGCTGAATGGTTTAGGAACAAAGGTCACTTCATCAAATCTCAATTAACAGCTGCAACAGGCGCATATGCGTTGTTCCAGTTGCAGGAGGAAATGAAAAGGCAGCTAAATACTGAAGGAAATTATACTGAGGAGGAACTTGAGGAATACCTTCAGGCCCATAAAAGAGTGATGATTGATTCACTGTGGAAGCTCAATGTCGCTGATATCGAAGCCACTCTTTGTCGTGTTTGTCAGCTGGTTCTTCAAGATCCAGAAGCCAAAAGAGAGGAGCTTCGTACAAGAGCAAGAGGTTTAAAAGCTCTGGGGAGGATCTTTCAGAGAGCCAAAACAGCTAGTGAGAGTGATCCTTTAGAAAATAGTGAACCTCAAAAGTTAAACGGAAATGGAAAGAACCACGATGAGGATACTTCTACATCACCAAAATCCAGTGAAGCATCTCACTCCACCTCTGGTCCTCAGGAACCACAAAGCCCCTACGTGGAAGAATTCAAACTTGGAGATGAACAATTCAACTATTACTTCCCACGACCAGCGCCACCTCCTGGCGCAGGGAAATACTCTTCCTCTGGCTATGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DnaJ DnaJ-X

Protein Analysis

398

Amino Acids

44.66

Weight (kDa)

5.17

Isoelectric Point (pI)

44.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	6 - 68	1.8e-25	DnaJ domain
DnaJ-X	PF14308	133 - 321	2.7e-54	X-domain of DnaJ-containing

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009290)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21080 AT1G21080 AT1G21080 AT1G76700
fragaria_vesca	FvH4_5g26910
malus_domestica	MD12G1067400.v1.1 MD14G1067500.v1.1
prunus_persica	Prupe.7G066900_v2.0.a1 Prupe.7G066900_v2.0.a1 Prupe.7G066900_v2.0.a1
pyrus_communis	pycom14g05580
rosa_chinensis	RchiOBHm_Chr7g0217951
rosa_laevigata	RLG00000002430
rosa_multiflora	Rmu_sc0012998.1_g000002
rosa_roxburghii	Rroxscaffold_3G00241610
rosa_rugosa	Rorug07G0172300 Rorug07G0172300 Rorug07G0172400
rosa_samantha	Rh7AG314500 Rh7DG312700
rosa_wichuraiana	Rw0G017290 Rw7G026590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	151, 1160
AclWI	GGATC	6 cut(s)	116, 239, 360, 860, 935, 956
AcsI	RAATTY	2 cut(s)	470, 1103
AcuI	CTGAAG	4 cut(s)	507, 513, 750, 752
AfaI	GTAC	4 cut(s)	20, 296, 609, 895
AfiI	CCNNNNNNNGG	6 cut(s)	151, 700, 1018, 1096, 1160, 1166
AgsI	TTSAA	5 cut(s)	290, 538, 863, 1108, 1129
AjnI	CCWGG	2 cut(s)	144, 1159
AjuI	GAANNNNNNNTTGG	2 cut(s)	1095, 1127
Alw21I	GWGCWC	1 cut(s)	33
AlwI	GGATC	6 cut(s)	116, 239, 360, 860, 935, 956
AlwNI	CAGNNNCTG	2 cut(s)	59, 430
AoxI	GGCC	2 cut(s)	159, 771
ApeKI	GCWGC	7 cut(s)	131, 251, 276, 515, 569, 668, 718
ApoI	RAATTY	2 cut(s)	470, 1103
Asp700I	GAANNNNTTC	1 cut(s)	765
AspLEI	GCGC	3 cut(s)	680, 1153, 1166
AspS9I	GGNCC	2 cut(s)	772, 1070
AsuHPI	GGTGA	1 cut(s)	1026
AvaII	GGWCC	1 cut(s)	1070
AxyI	CCTNAGG	1 cut(s)	1074
BbsI	GAAGAC	1 cut(s)	417
Bbv12I	GWGCWC	1 cut(s)	33
BbvI	GCAGC	7 cut(s)	118, 238, 288, 527, 581, 655, 730
BcgI	CGANNNNNNTGC	2 cut(s)	233, 267
BciT130I	CCWGG	2 cut(s)	146, 1161
BciVI	GTATCC	1 cut(s)	1015
BfaI	CTAG	2 cut(s)	581, 951
BfmI	CTRYAG	1 cut(s)	51
BfoI	RGCGCY	1 cut(s)	1154
BfuI	GTATCC	1 cut(s)	1015
BisI	GCNGC	7 cut(s)	132, 252, 277, 516, 570, 669, 719
BlsI	GCNGC	7 cut(s)	133, 253, 278, 517, 571, 670, 720
BmcAI	AGTACT	1 cut(s)	20
Bme1390I	CCNGG	2 cut(s)	146, 1161
Bme18I	GGWCC	1 cut(s)	1070
BmgT120I	GGNCC	2 cut(s)	772, 1070
BmiI	GGNNCC	1 cut(s)	1080
BmrFI	CCNGG	2 cut(s)	146, 1161
BmsI	GCATC	4 cut(s)	193, 223, 326, 1061
BpiI	GAAGAC	1 cut(s)	417
BpuEI	CTTGAG	2 cut(s)	111, 776
Bsa29I	ATCGAT	1 cut(s)	243
BsaAI	YACGTR	1 cut(s)	1096
Bsc4I	CCNNNNNNNGG	6 cut(s)	151, 700, 1018, 1096, 1160, 1166
Bse1I	ACTGG	2 cut(s)	694, 1044
Bse21I	CCTNAGG	1 cut(s)	1074
Bse3DI	GCAATG	2 cut(s)	270, 615
BseBI	CCWGG	2 cut(s)	146, 1161
BseCI	ATCGAT	1 cut(s)	243
BseGI	GGATG	1 cut(s)	100
BseLI	CCNNNNNNNGG	6 cut(s)	151, 700, 1018, 1096, 1160, 1166
BseMI	GCAATG	2 cut(s)	270, 615
BseMII	CTCAG	4 cut(s)	51, 437, 735, 1088
BseNI	ACTGG	2 cut(s)	694, 1044
BseRI	GAGGAG	2 cut(s)	761, 899
BseXI	GCAGC	7 cut(s)	118, 238, 288, 527, 581, 655, 730
BsgI	GTGCAG	1 cut(s)	117
BshFI	GGCC	2 cut(s)	161, 773
BshVI	ATCGAT	1 cut(s)	243
BsiHKAI	GWGCWC	1 cut(s)	33
BslI	CCNNNNNNNGG	6 cut(s)	151, 700, 1018, 1096, 1160, 1166
BsnI	GGCC	2 cut(s)	161, 773
Bsp1286I	GDGCHC	1 cut(s)	33
Bsp143I	GATC	6 cut(s)	121, 244, 352, 865, 927, 961
BspANI	GGCC	2 cut(s)	161, 773
BspCNI	CTCAG	4 cut(s)	52, 436, 736, 1087
BspDI	ATCGAT	1 cut(s)	243
BspLI	GGNNCC	1 cut(s)	1080
BspPI	GGATC	6 cut(s)	116, 239, 360, 860, 935, 956
BsrDI	GCAATG	2 cut(s)	270, 615
BsrI	ACTGG	2 cut(s)	694, 1044
BssMI	GATC	6 cut(s)	121, 244, 352, 865, 927, 961
Bst2UI	CCWGG	2 cut(s)	146, 1161
Bst4CI	ACNGT	1 cut(s)	801
Bst6I	CTCTTC	1 cut(s)	1183
BstAPI	GCANNNNNTGC	1 cut(s)	260
BstBAI	YACGTR	1 cut(s)	1096
BstC8I	GCNNGC	3 cut(s)	91, 309, 420
BstDEI	CTNAG	5 cut(s)	60, 173, 423, 744, 1074
BstENI	CCTNNNNNAGG	1 cut(s)	1164
BstF5I	GGATG	1 cut(s)	100
BstH2I	RGCGCY	1 cut(s)	1154
BstHHI	GCGC	3 cut(s)	680, 1153, 1166
BstKTI	GATC	6 cut(s)	124, 247, 355, 868, 930, 964
BstMBI	GATC	6 cut(s)	121, 244, 352, 865, 927, 961
BstMWI	GCNNNNNNNGC	6 cut(s)	203, 260, 323, 497, 677, 947
BstNI	CCWGG	2 cut(s)	146, 1161
BstNSI	RCATGY	1 cut(s)	210
BstSCI	CCNGG	2 cut(s)	144, 1159
BstSFI	CTRYAG	1 cut(s)	51
BstV1I	GCAGC	7 cut(s)	118, 238, 288, 527, 581, 655, 730
BstV2I	GAAGAC	1 cut(s)	417
BstX2I	RGATCY	2 cut(s)	865, 927
BstYI	RGATCY	2 cut(s)	865, 927
Bsu15I	ATCGAT	1 cut(s)	243
Bsu36I	CCTNAGG	1 cut(s)	1074
BsuI	GTATCC	1 cut(s)	1015
BsuRI	GGCC	2 cut(s)	161, 773
BsuTUI	ATCGAT	1 cut(s)	243
BtsCI	GGATG	1 cut(s)	100
BtsIMutI	CAGTG	2 cut(s)	797, 1051
Cac8I	GCNNGC	3 cut(s)	91, 309, 420
CaiI	CAGNNNCTG	2 cut(s)	59, 430
CfoI	GCGC	3 cut(s)	680, 1153, 1166
Cfr13I	GGNCC	2 cut(s)	772, 1070
ClaI	ATCGAT	1 cut(s)	243
Csp6I	GTAC	4 cut(s)	19, 295, 608, 894
CviAII	CATG	1 cut(s)	207
CviQI	GTAC	4 cut(s)	19, 295, 608, 894
DdeI	CTNAG	5 cut(s)	60, 173, 423, 744, 1074
DpnI	GATC	6 cut(s)	123, 246, 354, 867, 929, 963
DpnII	GATC	6 cut(s)	121, 244, 352, 865, 927, 961
DraI	TTTAAA	1 cut(s)	912
Eam1104I	CTCTTC	1 cut(s)	1183
EarI	CTCTTC	1 cut(s)	1183
Eco147I	AGGCCT	1 cut(s)	161
Eco32I	GATATC	2 cut(s)	337, 823
Eco47I	GGWCC	1 cut(s)	1070
Eco57I	CTGAAG	4 cut(s)	507, 513, 750, 752
Eco81I	CCTNAGG	1 cut(s)	1074
EcoNI	CCTNNNNNAGG	1 cut(s)	1164
EcoRI	GAATTC	1 cut(s)	1103
EcoRII	CCWGG	2 cut(s)	144, 1159
EcoRV	GATATC	2 cut(s)	337, 823
EcoT22I	ATGCAT	1 cut(s)	208
FaeI	CATG	1 cut(s)	210
FalI	AAGNNNNNCTT	4 cut(s)	402, 434, 819, 851
FatI	CATG	1 cut(s)	206
FauNDI	CATATG	1 cut(s)	682
Fnu4HI	GCNGC	7 cut(s)	132, 252, 277, 516, 570, 669, 719
FokI	GGATG	1 cut(s)	87
Fsp4HI	GCNGC	7 cut(s)	132, 252, 277, 516, 570, 669, 719
FspBI	CTAG	2 cut(s)	581, 951
GlaI	GCGC	3 cut(s)	679, 1152, 1165
GluI	GCNGC	7 cut(s)	132, 252, 277, 516, 570, 669, 719
HaeII	RGCGCY	1 cut(s)	1154
HaeIII	GGCC	2 cut(s)	161, 773
HhaI	GCGC	3 cut(s)	680, 1153, 1166
Hin1II	CATG	1 cut(s)	210
Hin6I	GCGC	3 cut(s)	678, 1151, 1164
HinP1I	GCGC	3 cut(s)	678, 1151, 1164
HindIII	AAGCTT	3 cut(s)	72, 195, 416
HinfI	GANTC	7 cut(s)	56, 179, 222, 427, 441, 504, 794
HphI	GGTGA	1 cut(s)	1026
Hpy166II	GTNNAC	1 cut(s)	980
Hpy188I	TCNGA	7 cut(s)	35, 61, 399, 426, 432, 605, 936
Hpy188III	TCNNGA	6 cut(s)	104, 183, 219, 863, 869, 1076
Hpy8I	GTNNAC	1 cut(s)	980
HpyAV	CCTTC	4 cut(s)	284, 341, 725, 776
HpyCH4III	ACNGT	1 cut(s)	801
HpyCH4IV	ACGT	1 cut(s)	1095
HpyCH4V	TGCA	8 cut(s)	134, 206, 236, 254, 263, 515, 671, 700
HpyF10VI	GCNNNNNNNGC	6 cut(s)	203, 260, 323, 497, 677, 947
HpyF3I	CTNAG	5 cut(s)	60, 173, 423, 744, 1074
HpySE526I	ACGT	1 cut(s)	1095
Hsp92II	CATG	1 cut(s)	210
HspAI	GCGC	3 cut(s)	678, 1151, 1164
Kzo9I	GATC	6 cut(s)	121, 244, 352, 865, 927, 961
LmnI	GCTCC	1 cut(s)	886
Lsp1109I	GCAGC	7 cut(s)	118, 238, 288, 527, 581, 655, 730
LweI	GCATC	4 cut(s)	193, 223, 326, 1061
MaeI	CTAG	2 cut(s)	581, 951
MaeII	ACGT	1 cut(s)	1095
MaeIII	GTNAC	1 cut(s)	641
MalI	GATC	6 cut(s)	123, 246, 354, 867, 929, 963
MboI	GATC	6 cut(s)	121, 244, 352, 865, 927, 961
MboII	GAAGA	6 cut(s)	331, 422, 598, 851, 1112, 1170
MfeI	CAATTG	1 cut(s)	543
MflI	RGATCY	2 cut(s)	865, 927
MhlI	GDGCHC	1 cut(s)	33
MluCI	AATT	8 cut(s)	139, 383, 470, 543, 659, 736, 1103, 1124
MlyI	GAGTC	2 cut(s)	435, 498
Mph1103I	ATGCAT	1 cut(s)	208
MroXI	GAANNNNTTC	1 cut(s)	765
MseI	TTAA	5 cut(s)	6, 66, 662, 911, 992
MspA1I	CMGCKG	2 cut(s)	668, 853
MspR9I	CCNGG	2 cut(s)	146, 1161
MunI	CAATTG	1 cut(s)	543
MvaI	CCWGG	2 cut(s)	146, 1161
MwoI	GCNNNNNNNGC	6 cut(s)	203, 260, 323, 497, 677, 947
NdeI	CATATG	1 cut(s)	682
NdeII	GATC	6 cut(s)	121, 244, 352, 865, 927, 961
NlaIII	CATG	1 cut(s)	210
NlaIV	GGNNCC	1 cut(s)	1080
NmuCI	GTSAC	1 cut(s)	641
NsiI	ATGCAT	1 cut(s)	208
NspI	RCATGY	1 cut(s)	210
PceI	AGGCCT	1 cut(s)	161
PcsI	WCGNNNNNNNCGW	1 cut(s)	822
PdmI	GAANNNNTTC	1 cut(s)	765
PfeI	GAWTC	5 cut(s)	56, 179, 222, 427, 794
PflMI	CCANNNNNTGG	2 cut(s)	151, 1160
PkrI	GCNGC	7 cut(s)	133, 253, 278, 517, 571, 670, 720
PleI	GAGTC	2 cut(s)	435, 498
PpsI	GAGTC	2 cut(s)	435, 498
Ppu21I	YACGTR	1 cut(s)	1096
Psp6I	CCWGG	2 cut(s)	144, 1159
PspGI	CCWGG	2 cut(s)	144, 1159
PspN4I	GGNNCC	1 cut(s)	1080
PspPI	GGNCC	2 cut(s)	772, 1070
PstNI	CAGNNNCTG	2 cut(s)	59, 430
PsuI	RGATCY	2 cut(s)	865, 927
PvuII	CAGCTG	2 cut(s)	668, 853
RsaI	GTAC	4 cut(s)	20, 296, 609, 895
RsaNI	GTAC	4 cut(s)	19, 295, 608, 894
SaqAI	TTAA	5 cut(s)	6, 66, 662, 911, 992
SatI	GCNGC	7 cut(s)	132, 252, 277, 516, 570, 669, 719
Sau3AI	GATC	6 cut(s)	121, 244, 352, 865, 927, 961
Sau96I	GGNCC	2 cut(s)	772, 1070
ScaI	AGTACT	1 cut(s)	20
SchI	GAGTC	2 cut(s)	435, 498
ScrFI	CCNGG	2 cut(s)	146, 1161
SduI	GDGCHC	1 cut(s)	33
SfaNI	GCATC	4 cut(s)	193, 223, 326, 1061
SfcI	CTRYAG	1 cut(s)	51
SinI	GGWCC	1 cut(s)	1070
SmlI	CTYRAG	2 cut(s)	126, 755
SmoI	CTYRAG	2 cut(s)	126, 755
Sse9I	AATT	8 cut(s)	139, 383, 470, 543, 659, 736, 1103, 1124
SseBI	AGGCCT	1 cut(s)	161
SspI	AATATT	1 cut(s)	258
SspMI	CTAG	2 cut(s)	581, 951
StuI	AGGCCT	1 cut(s)	161
StyD4I	CCNGG	2 cut(s)	144, 1159
TaaI	ACNGT	1 cut(s)	801
TaiI	ACGT	1 cut(s)	1098
TaqI	TCGA	2 cut(s)	243, 825
TaqII	GACCGA	1 cut(s)	453
TasI	AATT	8 cut(s)	139, 383, 470, 543, 659, 736, 1103, 1124
TatI	WGTACW	1 cut(s)	18
TfiI	GAWTC	5 cut(s)	56, 179, 222, 427, 794
Tru1I	TTAA	5 cut(s)	6, 66, 662, 911, 992
Tru9I	TTAA	5 cut(s)	6, 66, 662, 911, 992
TscAI	CASTG	2 cut(s)	804, 1051
TseFI	GTSAC	1 cut(s)	641
TseI	GCWGC	7 cut(s)	131, 251, 276, 515, 569, 668, 718
Tsp45I	GTSAC	1 cut(s)	641
TspDTI	ATGAA	5 cut(s)	89, 604, 637, 725, 1134
TspGWI	ACGGA	2 cut(s)	359, 1011
TspRI	CASTG	2 cut(s)	804, 1051
Van91I	CCANNNNNTGG	2 cut(s)	151, 1160
VpaK11BI	GGWCC	1 cut(s)	1070
XagI	CCTNNNNNAGG	1 cut(s)	1164
XapI	RAATTY	2 cut(s)	470, 1103
XceI	RCATGY	1 cut(s)	210
XmnI	GAANNNNTTC	1 cut(s)	765
XspI	CTAG	2 cut(s)	581, 951
ZrmI	AGTACT	1 cut(s)	20
Zsp2I	ATGCAT	1 cut(s)	208

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.