Tubulin-tyrosine ligase family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G77550 |
| fragaria_vesca | FvH4_1g08650 FvH4_1g08650 |
| malus_domestica | MD15G1217600.v1.1 |
| prunus_persica | Prupe.7G198800_v2.0.a1 |
| pyrus_communis | pycom15g19320 |
| rosa_chinensis | RchiOBHm_Chr2g0094931 |
| rosa_laevigata | RLG00000016532 |
| rosa_multiflora | Rmu_sc0004316.1_g000014 |
| rosa_roxburghii | Rroxscaffold_2G00146760 |
| rosa_rugosa | Rorug02G0048900 |
| rosa_samantha | Rh2AG095700 Rh2CG098600 Rh2DG095300 |
| rosa_wichuraiana | Rw2G007200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2287 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1871 |
| AatII | GACGTC | 1 cut(s) | 216 |
| Acc36I | ACCTGC | 1 cut(s) | 2287 |
| AccB1I | GGYRCC | 1 cut(s) | 2526 |
| AccII | CGCG | 1 cut(s) | 2333 |
| AclI | AACGTT | 1 cut(s) | 2262 |
| AclWI | GGATC | 5 cut(s) | 777, 906, 1596, 1810, 1913 |
| AcuI | CTGAAG | 4 cut(s) | 45, 599, 602, 1518 |
| AcyI | GRCGYC | 1 cut(s) | 213 |
| AfaI | GTAC | 5 cut(s) | 39, 1677, 1727, 2012, 2372 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 701, 1981, 2287 |
| AflII | CTTAAG | 1 cut(s) | 269 |
| AflIII | ACRYGT | 1 cut(s) | 2551 |
| AgeI | ACCGGT | 1 cut(s) | 810 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 243 |
| AjnI | CCWGG | 5 cut(s) | 233, 280, 751, 973, 1436 |
| Alw21I | GWGCWC | 4 cut(s) | 852, 1379, 1695, 2022 |
| Alw26I | GTCTC | 4 cut(s) | 1420, 1572, 1775, 2537 |
| Alw44I | GTGCAC | 2 cut(s) | 848, 1375 |
| AlwI | GGATC | 5 cut(s) | 777, 906, 1596, 1810, 1913 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1495 |
| AoxI | GGCC | 2 cut(s) | 1343, 1500 |
| ApaLI | GTGCAC | 2 cut(s) | 848, 1375 |
| ApeKI | GCWGC | 3 cut(s) | 265, 401, 2324 |
| AseI | ATTAAT | 1 cut(s) | 990 |
| AsiGI | ACCGGT | 1 cut(s) | 810 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 938, 1608 |
| AspLEI | GCGC | 3 cut(s) | 511, 1171, 2335 |
| AspS9I | GGNCC | 2 cut(s) | 977, 1991 |
| AsuHPI | GGTGA | 4 cut(s) | 781, 1379, 2302, 2311 |
| AvaII | GGWCC | 2 cut(s) | 977, 1991 |
| BaeGI | GKGCMC | 3 cut(s) | 715, 852, 1379 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1119, 1152 |
| BanI | GGYRCC | 1 cut(s) | 2526 |
| BanII | GRGCYC | 1 cut(s) | 1695 |
| BauI | CACGAG | 3 cut(s) | 682, 851, 1380 |
| BbsI | GAAGAC | 3 cut(s) | 208, 239, 945 |
| Bbv12I | GWGCWC | 4 cut(s) | 852, 1379, 1695, 2022 |
| BbvI | GCAGC | 3 cut(s) | 277, 413, 2336 |
| BccI | CCATC | 9 cut(s) | 116, 292, 423, 628, 1222, 1556, 1975, 2266, 2471 |
| BceAI | ACGGC | 2 cut(s) | 1065, 2241 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 86, 120 |
| BciT130I | CCWGG | 5 cut(s) | 235, 282, 753, 975, 1438 |
| BclI | TGATCA | 4 cut(s) | 160, 370, 1632, 1885 |
| BcoDI | GTCTC | 4 cut(s) | 1420, 1572, 1775, 2537 |
| BfaI | CTAG | 6 cut(s) | 486, 827, 998, 1313, 2069, 2361 |
| BfmI | CTRYAG | 1 cut(s) | 1496 |
| BfoI | RGCGCY | 1 cut(s) | 512 |
| BfrI | CTTAAG | 1 cut(s) | 269 |
| BfuAI | ACCTGC | 1 cut(s) | 2287 |
| BglII | AGATCT | 1 cut(s) | 1998 |
| BisI | GCNGC | 7 cut(s) | 57, 71, 127, 266, 402, 2322, 2325 |
| BlsI | GCNGC | 7 cut(s) | 58, 72, 128, 267, 403, 2323, 2326 |
| Bme1390I | CCNGG | 5 cut(s) | 235, 282, 753, 975, 1438 |
| Bme18I | GGWCC | 2 cut(s) | 977, 1991 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 243 |
| BmgT120I | GGNCC | 2 cut(s) | 977, 1991 |
| BmiI | GGNNCC | 2 cut(s) | 1993, 2528 |
| BmrFI | CCNGG | 5 cut(s) | 235, 282, 753, 975, 1438 |
| BmrI | ACTGGG | 1 cut(s) | 1846 |
| BmsI | GCATC | 8 cut(s) | 244, 322, 846, 1141, 1642, 1777, 2334, 2344 |
| BmuI | ACTGGG | 1 cut(s) | 1846 |
| BpiI | GAAGAC | 3 cut(s) | 208, 239, 945 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 347, 379 |
| BpmI | CTGGAG | 2 cut(s) | 357, 2111 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1110 |
| BpuEI | CTTGAG | 2 cut(s) | 689, 1581 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2276 |
| BsaHI | GRCGYC | 1 cut(s) | 213 |
| BsaI | GGTCTC | 1 cut(s) | 1572 |
| BsaJI | CCNNGG | 2 cut(s) | 1916, 2223 |
| BsaWI | WCCGGW | 1 cut(s) | 810 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2367, 2397 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 701, 1981, 2287 |
| Bse118I | RCCGGY | 1 cut(s) | 810 |
| Bse1I | ACTGG | 4 cut(s) | 1072, 1723, 1852, 1993 |
| Bse3DI | GCAATG | 3 cut(s) | 790, 1161, 2373 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2276 |
| BseBI | CCWGG | 5 cut(s) | 235, 282, 753, 975, 1438 |
| BseDI | CCNNGG | 2 cut(s) | 1916, 2223 |
| BseJI | GATNNNNATC | 1 cut(s) | 2276 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 701, 1981, 2287 |
| BseMI | GCAATG | 3 cut(s) | 790, 1161, 2373 |
| BseMII | CTCAG | 3 cut(s) | 282, 1101, 1443 |
| BseNI | ACTGG | 4 cut(s) | 1072, 1723, 1852, 1993 |
| BseRI | GAGGAG | 1 cut(s) | 170 |
| BseSI | GKGCMC | 3 cut(s) | 715, 852, 1379 |
| BseXI | GCAGC | 3 cut(s) | 277, 413, 2336 |
| BsgI | GTGCAG | 1 cut(s) | 2532 |
| Bsh1236I | CGCG | 1 cut(s) | 2333 |
| BshFI | GGCC | 2 cut(s) | 1345, 1502 |
| BshNI | GGYRCC | 1 cut(s) | 2526 |
| BshTI | ACCGGT | 1 cut(s) | 810 |
| BsiHKAI | GWGCWC | 4 cut(s) | 852, 1379, 1695, 2022 |
| BsiSI | CCGG | 1 cut(s) | 811 |
| BslFI | GGGAC | 4 cut(s) | 457, 1834, 1877, 1977 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 701, 1981, 2287 |
| BsmAI | GTCTC | 4 cut(s) | 1420, 1572, 1775, 2537 |
| BsmFI | GGGAC | 4 cut(s) | 457, 1834, 1877, 1977 |
| BsmI | GAATGC | 3 cut(s) | 839, 1104, 1354 |
| BsnI | GGCC | 2 cut(s) | 1345, 1502 |
| Bso31I | GGTCTC | 1 cut(s) | 1572 |
| Bsp1286I | GDGCHC | 5 cut(s) | 715, 852, 1379, 1695, 2022 |
| Bsp1407I | TGTACA | 1 cut(s) | 1675 |
| Bsp19I | CCATGG | 1 cut(s) | 1916 |
| BspANI | GGCC | 2 cut(s) | 1345, 1502 |
| BspCNI | CTCAG | 3 cut(s) | 283, 1102, 1444 |
| BspFNI | CGCG | 1 cut(s) | 2333 |
| BspHI | TCATGA | 2 cut(s) | 1468, 2190 |
| BspLI | GGNNCC | 2 cut(s) | 1993, 2528 |
| BspMAI | CTGCAG | 1 cut(s) | 1500 |
| BspMI | ACCTGC | 1 cut(s) | 2287 |
| BspPI | GGATC | 5 cut(s) | 777, 906, 1596, 1810, 1913 |
| BspQI | GCTCTTC | 1 cut(s) | 944 |
| BspT107I | GGYRCC | 1 cut(s) | 2526 |
| BspTI | CTTAAG | 1 cut(s) | 269 |
| BspTNI | GGTCTC | 1 cut(s) | 1572 |
| BsrDI | GCAATG | 3 cut(s) | 790, 1161, 2373 |
| BsrFI | RCCGGY | 1 cut(s) | 810 |
| BsrGI | TGTACA | 1 cut(s) | 1675 |
| BsrI | ACTGG | 4 cut(s) | 1072, 1723, 1852, 1993 |
| BssAI | RCCGGY | 1 cut(s) | 810 |
| BssECI | CCNNGG | 2 cut(s) | 1916, 2223 |
| BssNI | GRCGYC | 1 cut(s) | 213 |
| BssSI | CACGAG | 3 cut(s) | 682, 851, 1380 |
| BssT1I | CCWWGG | 1 cut(s) | 1916 |
| Bst2BI | CACGAG | 3 cut(s) | 682, 851, 1380 |
| Bst2UI | CCWGG | 5 cut(s) | 235, 282, 753, 975, 1438 |
| Bst4CI | ACNGT | 4 cut(s) | 951, 2159, 2188, 2432 |
| Bst6I | CTCTTC | 4 cut(s) | 98, 614, 944, 2537 |
| BstACI | GRCGYC | 1 cut(s) | 213 |
| BstAFI | CTTAAG | 1 cut(s) | 269 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 856 |
| BstAUI | TGTACA | 1 cut(s) | 1675 |
| BstC8I | GCNNGC | 4 cut(s) | 1500, 2444, 2448, 2452 |
| BstDEI | CTNAG | 5 cut(s) | 291, 512, 1110, 1452, 2536 |
| BstDSI | CCRYGG | 2 cut(s) | 1916, 2223 |
| BstFNI | CGCG | 1 cut(s) | 2333 |
| BstH2I | RGCGCY | 1 cut(s) | 512 |
| BstHHI | GCGC | 3 cut(s) | 511, 1171, 2335 |
| BstMAI | GTCTC | 4 cut(s) | 1420, 1572, 1775, 2537 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 76, 172, 856, 1351, 2330 |
| BstNI | CCWGG | 5 cut(s) | 235, 282, 753, 975, 1438 |
| BstNSI | RCATGY | 3 cut(s) | 1079, 1755, 2446 |
| BstSCI | CCNGG | 5 cut(s) | 233, 280, 751, 973, 1436 |
| BstSFI | CTRYAG | 1 cut(s) | 1496 |
| BstSLI | GKGCMC | 3 cut(s) | 715, 852, 1379 |
| BstUI | CGCG | 1 cut(s) | 2333 |
| BstV1I | GCAGC | 3 cut(s) | 277, 413, 2336 |
| BstV2I | GAAGAC | 3 cut(s) | 208, 239, 945 |
| BstX2I | RGATCY | 4 cut(s) | 1588, 1802, 1905, 1998 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1859 |
| BstYI | RGATCY | 4 cut(s) | 1588, 1802, 1905, 1998 |
| BsuRI | GGCC | 2 cut(s) | 1345, 1502 |
| BtgI | CCRYGG | 2 cut(s) | 1916, 2223 |
| BtsI | GCAGTG | 2 cut(s) | 183, 2316 |
| BtsIMutI | CAGTG | 4 cut(s) | 183, 947, 2184, 2316 |
| BveI | ACCTGC | 1 cut(s) | 2287 |
| Cac8I | GCNNGC | 4 cut(s) | 1500, 2444, 2448, 2452 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1495 |
| CciI | TCATGA | 2 cut(s) | 1468, 2190 |
| CfoI | GCGC | 3 cut(s) | 511, 1171, 2335 |
| Cfr10I | RCCGGY | 1 cut(s) | 810 |
| Cfr13I | GGNCC | 2 cut(s) | 977, 1991 |
| Csp6I | GTAC | 5 cut(s) | 38, 1676, 1726, 2011, 2371 |
| CspAI | ACCGGT | 1 cut(s) | 810 |
| CviQI | GTAC | 5 cut(s) | 38, 1676, 1726, 2011, 2371 |
| DdeI | CTNAG | 5 cut(s) | 291, 512, 1110, 1452, 2536 |
| DraI | TTTAAA | 1 cut(s) | 876 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1871 |
| DriI | GACNNNNNGTC | 1 cut(s) | 243 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1871 |
| Eam1104I | CTCTTC | 4 cut(s) | 98, 614, 944, 2537 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 243 |
| EarI | CTCTTC | 4 cut(s) | 98, 614, 944, 2537 |
| EciI | GGCGGA | 1 cut(s) | 2514 |
| Ecl136II | GAGCTC | 1 cut(s) | 1693 |
| Eco130I | CCWWGG | 1 cut(s) | 1916 |
| Eco24I | GRGCYC | 1 cut(s) | 1695 |
| Eco31I | GGTCTC | 1 cut(s) | 1572 |
| Eco32I | GATATC | 2 cut(s) | 733, 2278 |
| Eco47I | GGWCC | 2 cut(s) | 977, 1991 |
| Eco53kI | GAGCTC | 1 cut(s) | 1693 |
| Eco57I | CTGAAG | 4 cut(s) | 45, 599, 602, 1518 |
| EcoICRI | GAGCTC | 1 cut(s) | 1693 |
| EcoRI | GAATTC | 1 cut(s) | 904 |
| EcoRII | CCWGG | 5 cut(s) | 233, 280, 751, 973, 1436 |
| EcoRV | GATATC | 2 cut(s) | 733, 2278 |
| EcoT14I | CCWWGG | 1 cut(s) | 1916 |
| EcoT38I | GRGCYC | 1 cut(s) | 1695 |
| ErhI | CCWWGG | 1 cut(s) | 1916 |
| FaqI | GGGAC | 4 cut(s) | 457, 1834, 1877, 1977 |
| FauI | CCCGC | 2 cut(s) | 2094, 2439 |
| FbaI | TGATCA | 4 cut(s) | 160, 370, 1632, 1885 |
| Fnu4HI | GCNGC | 7 cut(s) | 57, 71, 127, 266, 402, 2322, 2325 |
| FriOI | GRGCYC | 1 cut(s) | 1695 |
| Fsp4HI | GCNGC | 7 cut(s) | 57, 71, 127, 266, 402, 2322, 2325 |
| FspBI | CTAG | 6 cut(s) | 486, 827, 998, 1313, 2069, 2361 |
| GlaI | GCGC | 3 cut(s) | 510, 1170, 2334 |
| GluI | GCNGC | 7 cut(s) | 57, 71, 127, 266, 402, 2322, 2325 |
| GsuI | CTGGAG | 2 cut(s) | 357, 2111 |
| HaeII | RGCGCY | 1 cut(s) | 512 |
| HaeIII | GGCC | 2 cut(s) | 1345, 1502 |
| HapII | CCGG | 1 cut(s) | 811 |
| HhaI | GCGC | 3 cut(s) | 511, 1171, 2335 |
| Hin1I | GRCGYC | 1 cut(s) | 213 |
| Hin6I | GCGC | 3 cut(s) | 509, 1169, 2333 |
| HinP1I | GCGC | 3 cut(s) | 509, 1169, 2333 |
| HincII | GTYRAC | 2 cut(s) | 967, 1084 |
| HindII | GTYRAC | 2 cut(s) | 967, 1084 |
| HindIII | AAGCTT | 3 cut(s) | 77, 173, 1199 |
| HpaII | CCGG | 1 cut(s) | 811 |
| HphI | GGTGA | 4 cut(s) | 781, 1379, 2302, 2311 |
| Hpy166II | GTNNAC | 7 cut(s) | 626, 850, 967, 1084, 1377, 1582, 1676 |
| Hpy188I | TCNGA | 9 cut(s) | 211, 375, 582, 618, 633, 663, 903, 1614, 2205 |
| Hpy8I | GTNNAC | 7 cut(s) | 626, 850, 967, 1084, 1377, 1582, 1676 |
| Hpy99I | CGWCG | 1 cut(s) | 171 |
| HpyCH4III | ACNGT | 4 cut(s) | 951, 2159, 2188, 2432 |
| HpyCH4IV | ACGT | 5 cut(s) | 213, 628, 1882, 2262, 2553 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 76, 172, 856, 1351, 2330 |
| HpyF3I | CTNAG | 5 cut(s) | 291, 512, 1110, 1452, 2536 |
| HpySE526I | ACGT | 5 cut(s) | 213, 628, 1882, 2262, 2553 |
| Hsp92I | GRCGYC | 1 cut(s) | 213 |
| HspAI | GCGC | 3 cut(s) | 509, 1169, 2333 |
| Ksp22I | TGATCA | 4 cut(s) | 160, 370, 1632, 1885 |
| LguI | GCTCTTC | 1 cut(s) | 944 |
| LmnI | GCTCC | 2 cut(s) | 1288, 2402 |
| Lsp1109I | GCAGC | 3 cut(s) | 277, 413, 2336 |
| LweI | GCATC | 8 cut(s) | 244, 322, 846, 1141, 1642, 1777, 2334, 2344 |
| MaeI | CTAG | 6 cut(s) | 486, 827, 998, 1313, 2069, 2361 |
| MaeII | ACGT | 5 cut(s) | 213, 628, 1882, 2262, 2553 |
| MaeIII | GTNAC | 4 cut(s) | 787, 1815, 2422, 2554 |
| MfeI | CAATTG | 2 cut(s) | 1844, 1889 |
| MflI | RGATCY | 4 cut(s) | 1588, 1802, 1905, 1998 |
| MhlI | GDGCHC | 5 cut(s) | 715, 852, 1379, 1695, 2022 |
| MlyI | GAGTC | 6 cut(s) | 413, 455, 673, 1079, 1422, 1523 |
| MmeI | TCCRAC | 6 cut(s) | 414, 420, 892, 1551, 2154, 2183 |
| MroXI | GAANNNNTTC | 2 cut(s) | 938, 1608 |
| MseI | TTAA | 6 cut(s) | 270, 573, 875, 990, 2265, 2493 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1260, 1560, 1976, 2189 |
| MspA1I | CMGCKG | 2 cut(s) | 1417, 2089 |
| MspCI | CTTAAG | 1 cut(s) | 269 |
| MspI | CCGG | 1 cut(s) | 811 |
| MspR9I | CCNGG | 5 cut(s) | 235, 282, 753, 975, 1438 |
| MunI | CAATTG | 2 cut(s) | 1844, 1889 |
| Mva1269I | GAATGC | 3 cut(s) | 839, 1104, 1354 |
| MvaI | CCWGG | 5 cut(s) | 235, 282, 753, 975, 1438 |
| MvnI | CGCG | 1 cut(s) | 2333 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 76, 172, 856, 1351, 2330 |
| NcoI | CCATGG | 1 cut(s) | 1916 |
| NlaIV | GGNNCC | 2 cut(s) | 1993, 2528 |
| NmuCI | GTSAC | 1 cut(s) | 787 |
| NspI | RCATGY | 3 cut(s) | 1079, 1755, 2446 |
| PaeI | GCATGC | 1 cut(s) | 2446 |
| PagI | TCATGA | 2 cut(s) | 1468, 2190 |
| PaqCI | CACCTGC | 1 cut(s) | 2287 |
| PciSI | GCTCTTC | 1 cut(s) | 944 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 150 |
| PctI | GAATGC | 3 cut(s) | 839, 1104, 1354 |
| PdmI | GAANNNNTTC | 2 cut(s) | 938, 1608 |
| PfeI | GAWTC | 9 cut(s) | 146, 191, 206, 577, 1003, 1010, 1117, 1316, 2212 |
| PfoI | TCCNGGA | 1 cut(s) | 280 |
| PinAI | ACCGGT | 1 cut(s) | 810 |
| PkrI | GCNGC | 7 cut(s) | 58, 72, 128, 267, 403, 2323, 2326 |
| PleI | GAGTC | 6 cut(s) | 413, 455, 672, 1079, 1422, 1522 |
| PpsI | GAGTC | 6 cut(s) | 413, 455, 672, 1079, 1422, 1522 |
| PshBI | ATTAAT | 1 cut(s) | 990 |
| Psp124BI | GAGCTC | 1 cut(s) | 1695 |
| Psp1406I | AACGTT | 1 cut(s) | 2262 |
| Psp6I | CCWGG | 5 cut(s) | 233, 280, 751, 973, 1436 |
| PspGI | CCWGG | 5 cut(s) | 233, 280, 751, 973, 1436 |
| PspN4I | GGNNCC | 2 cut(s) | 1993, 2528 |
| PspPI | GGNCC | 2 cut(s) | 977, 1991 |
| PstI | CTGCAG | 1 cut(s) | 1500 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1495 |
| PsuI | RGATCY | 4 cut(s) | 1588, 1802, 1905, 1998 |
| RsaI | GTAC | 5 cut(s) | 39, 1677, 1727, 2012, 2372 |
| RsaNI | GTAC | 5 cut(s) | 38, 1676, 1726, 2011, 2371 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1260, 1560, 1976, 2189 |
| SacI | GAGCTC | 1 cut(s) | 1695 |
| SapI | GCTCTTC | 1 cut(s) | 944 |
| SaqAI | TTAA | 6 cut(s) | 270, 573, 875, 990, 2265, 2493 |
| SatI | GCNGC | 7 cut(s) | 57, 71, 127, 266, 402, 2322, 2325 |
| Sau96I | GGNCC | 2 cut(s) | 977, 1991 |
| SchI | GAGTC | 6 cut(s) | 413, 455, 673, 1079, 1422, 1523 |
| ScrFI | CCNGG | 5 cut(s) | 235, 282, 753, 975, 1438 |
| SduI | GDGCHC | 5 cut(s) | 715, 852, 1379, 1695, 2022 |
| SfaNI | GCATC | 8 cut(s) | 244, 322, 846, 1141, 1642, 1777, 2334, 2344 |
| SfcI | CTRYAG | 1 cut(s) | 1496 |
| SinI | GGWCC | 2 cut(s) | 977, 1991 |
| SmiI | ATTTAAAT | 1 cut(s) | 876 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1260, 1560, 1976, 2189 |
| SmlI | CTYRAG | 3 cut(s) | 269, 668, 1596 |
| SmoI | CTYRAG | 3 cut(s) | 269, 668, 1596 |
| SphI | GCATGC | 1 cut(s) | 2446 |
| SspI | AATATT | 2 cut(s) | 648, 880 |
| SspMI | CTAG | 6 cut(s) | 486, 827, 998, 1313, 2069, 2361 |
| SstI | GAGCTC | 1 cut(s) | 1695 |
| StyD4I | CCNGG | 5 cut(s) | 233, 280, 751, 973, 1436 |
| StyI | CCWWGG | 1 cut(s) | 1916 |
| SwaI | ATTTAAAT | 1 cut(s) | 876 |
| TaaI | ACNGT | 4 cut(s) | 951, 2159, 2188, 2432 |
| TaiI | ACGT | 5 cut(s) | 216, 631, 1885, 2265, 2556 |
| TaqI | TCGA | 8 cut(s) | 12, 96, 144, 225, 1512, 1938, 2391, 2403 |
| TatI | WGTACW | 4 cut(s) | 37, 1675, 1725, 2010 |
| TauI | GCSGC | 4 cut(s) | 59, 73, 129, 2324 |
| TfiI | GAWTC | 9 cut(s) | 146, 191, 206, 577, 1003, 1010, 1117, 1316, 2212 |
| Tru1I | TTAA | 6 cut(s) | 270, 573, 875, 990, 2265, 2493 |
| Tru9I | TTAA | 6 cut(s) | 270, 573, 875, 990, 2265, 2493 |
| TscAI | CASTG | 4 cut(s) | 190, 954, 2191, 2316 |
| TseFI | GTSAC | 1 cut(s) | 787 |
| TseI | GCWGC | 3 cut(s) | 265, 401, 2324 |
| Tsp45I | GTSAC | 1 cut(s) | 787 |
| TspGWI | ACGGA | 4 cut(s) | 184, 1601, 1945, 2388 |
| TspRI | CASTG | 4 cut(s) | 190, 954, 2191, 2316 |
| Vha464I | CTTAAG | 1 cut(s) | 269 |
| VneI | GTGCAC | 2 cut(s) | 848, 1375 |
| VpaK11BI | GGWCC | 2 cut(s) | 977, 1991 |
| VspI | ATTAAT | 1 cut(s) | 990 |
| XbaI | TCTAGA | 2 cut(s) | 997, 2360 |
| XceI | RCATGY | 3 cut(s) | 1079, 1755, 2446 |
| XmnI | GAANNNNTTC | 2 cut(s) | 938, 1608 |
| XspI | CTAG | 6 cut(s) | 486, 827, 998, 1313, 2069, 2361 |
| ZraI | GACGTC | 1 cut(s) | 214 |