pycom15g19320

Tubulin--tyrosine ligase-like protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
13743388 .. 13748104
4717 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g19320.8

Sequence Viewer

Length: 2580 bp
ATGTCGAAAATCGAAACCTACGAGGACTTCGTCAAAGTTCACGGCCTGCTTCTGGCGGCCTCGGGACTACCGCAGTCCCTCCACCGCCAGCTCTTCCAGAAGCTTCTATCGGAGAGCTTCGACGGCGGGTCCCACTTCCAAATCGAGCCGGCGGAAGACGGCCGCCAGCGGCGCCTTGTTTTGACCTCCGACTCCATGCCCGCACACTCCGACGTCTTCCTCGTCGACCACGCCTGGACTTTCCGCCTCTCCGACGCTTACAAACAGTTGAGGGAAGTTCCGGGATTGGCTGAGAGGATGGCGGCGATAATGTGCTTGGATACCGATTTGAATTCCGATTCGGACGAGAATCGGGAAAGCAATGGAAAACGCAGCGTTTTGGAGGTGCTGGAAAGTGAAATCGCTGAAGCCAGAGGGAATGTGAGGTGGCTGGAGCTTGAAGACCTTGACATGGACGATGAAACGCTGTCGTCTTTGGACTTAGCTGCCAAGTTCCCAGATTTGCTTGCATTGTCTTTGTGTGGAAATAAGCTTGAGAGTGTGGAAGTAGTTGTTCAGGAAGTTACCAAATTCAAAAATCTGAAAGCTTTATGGCTGGACAATAATCCAGTTGTACAAAATCGTGGCGATGAATTGGCGGATAAAGTTCTGCAGGAAATGCCGAGTCTTGAAATATATAACTCAAGATTTACCTCCAATTTTGGTGAGTGGGCAGTGGGGTTTTGTGGAGGAGTATACGACAAGGAAAATCCAGGCAGCATTGATCAGCCTGACAACGCGGTGCATCAAGTCACTGATCTTGATCTTTCGAATAGATGTATTCACAACATATTCAACAAGTTTCAGGCATTTTCACCTGCTCAACTTCCATGTCTTTCATACTTGAATCTTCGTGGAAATCCGTTAGATGAGACCTCAGCGGGTGACTTGTTACACTTACTCAGGAATTTTCCTTCCTTACAGTCTCTGGAGGTGGATATTCCTGGTCCTCTTGGAGAAAGCGCTGTACAAATTCTTGAATCTCTTCCTAATGTTTCAGTGCTGAATGGTGTTAATGCATCAAAAGTACTGGAAACTGAAAAGGATGTAGTTGACTCAGCACTTCAACCTCGTCTTCCTGAGTGGTCTGCAGATGAGCCTCTTACTGATCGTGTTATAAGTGCAATGTGGCTGTACTTAATGACGTATCGACTTGCAGATGAGGAGAAGATAGATGAGACCTCTGTATGGTATGTGATGGATGAGCTTGGTTCAGCTTTGCGGCATAGCGATGAGCCAAATTTCAGAGTGGCTCCTTTTCTGTTCATGCCAGAGGGGACACTAGCATCCGCTGTGAGCTTCACTATATTATGGCCAATCCAAAATGTTCAAAAAGGTTATGAGTGCACACGTGATTATCTTTTTGGTATTGGAGAAGATAAACAACGTTCTGCTAGACTGACAGCTTGGTTTCATACACCAGAGAATTATTTCATTCGAGAGTATGAAAAGCACCGGATGAGCTTGAAATCAAAAAATTTACCCTCTCAGTCGTCAGAGCCCTGTCCGGCAAGAAGCCTGCTTCGTAGTGAAACATCAGCTTTACGTGTGTACACTGATATACCTCAAGTAGAAGAACTTTTGACTCGTCCTGAGTTTGTAATCACCACTGATCTGAAGGATGCCGATATCATATGGACGGGTACACAGGTAGATGAGGATATGAAGAAGGCTACTGGAATAACACAAAATCAGTACGTAAATCAATTCCCTTTTGAGGCTTGTATTGTGATGAAACATCATTTGGCAGAGACTATTCAAAAGGCACATGGATCTCCTGAATGGCTGCAGCCTACCTATAATCTTGAAACACATCTATCTCAGCTTATTGGTGATTATTGTGTACGAAAGCGAGATGGACTTAACAATCTATGGATCTTAAAACCTTGGAATATGGCACGAACTATAGATACAACTGTCACTAGTAATATATCTGCTATTATCCGGCTCATGGAAACTGGACCAAAGATATGTCAGAAGTATATTGAGCACCCTGCTTTGTTCCAAGGGAGAAAGTTTGATATCCGCTACCTAGTTTTAGTTCGGAGTATGAACCCTCTGGAAATCTTTCTTGCGGACACTTTCTGGGTTAGATTGGCGAACAACCAATATTCTTTAGACAAGCACAGTTTATTTGAATATGAGACTCACTTTACTGTGATGAACTACCGCGGCACATTGAATCACAAGAACACATCGGAATTTGTGAGGGAATTTGAACAGGAGCACAAAGTTAACTGGTTGGATATTCATTCGCGGGTGACAAAGATGATACGATCAGTTTTTGAGGCAGCTGCACAAGTACATCCAGAGATGCATAGTCCAACATCGAGGGCCATGTATGGGGTGGATGTCATGCTTGATGGTTCTTTCCAGCCAAAGTTACTGGAGGTGACCTATTGTCCGGACTGCGGAAGGGCATGCAAATACGATATGAACGCTATAGTCGGAAACCAGGAATTAGTAAGAGCTTGCGACTTTTACAACTATGTTTTCGGTTGCCTCTTTTTGAACGAAACCACTCATGTTAGCCCCCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

860

Amino Acids

97.95

Weight (kDa)

5.03

Isoelectric Point (pI)

42.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016100)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G77550
fragaria_vesca FvH4_1g08650 FvH4_1g08650
malus_domestica MD15G1217600.v1.1
prunus_persica Prupe.7G198800_v2.0.a1
pyrus_communis pycom15g19320
rosa_chinensis RchiOBHm_Chr2g0094931
rosa_laevigata RLG00000016532
rosa_multiflora Rmu_sc0004316.1_g000014
rosa_roxburghii Rroxscaffold_2G00146760
rosa_rugosa Rorug02G0048900
rosa_samantha Rh2AG095700 Rh2CG098600 Rh2DG095300
rosa_wichuraiana Rw2G007200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1157
AarI CACCTGC 1 cut(s) 865
AatII GACGTC 1 cut(s) 216
Acc36I ACCTGC 1 cut(s) 865
AccB1I GGYRCC 1 cut(s) 171
AccI GTMKAC 2 cut(s) 225, 735
AccII CGCG 3 cut(s) 779, 2211, 2296
AccIII TCCGGA 1 cut(s) 2443
AclI AACGTT 1 cut(s) 1426
AclWI GGATC 2 cut(s) 1819, 1922
AcoI YGGCCR 2 cut(s) 160, 1352
AcsI RAATTY 8 cut(s) 331, 569, 946, 1011, 1279, 1516, 2240, 2252
AcuI CTGAAG 2 cut(s) 426, 1676
AcvI CACGTG 1 cut(s) 1391
AcyI GRCGYC 2 cut(s) 172, 213
AfaI GTAC 9 cut(s) 615, 1008, 1068, 1175, 1592, 1684, 1736, 1884, 2343
AfeI AGCGCT 1 cut(s) 1003
AfiI CCNNNNNNNGG 7 cut(s) 52, 451, 1227, 1756, 1990, 2382, 2450
AflIII ACRYGT 2 cut(s) 1388, 1585
AhdI GACNNNNNGTC 2 cut(s) 127, 2439
AhlI ACTAGT 1 cut(s) 1961
AjnI CCWGG 4 cut(s) 233, 751, 982, 2493
AjuI GAANNNNNNNTTGG 2 cut(s) 1766, 1798
Alw21I GWGCWC 3 cut(s) 1388, 2031, 2268
Alw26I GTCTC 5 cut(s) 905, 969, 1211, 1784, 2177
Alw44I GTGCAC 1 cut(s) 1384
AlwI GGATC 2 cut(s) 1819, 1922
AlwNI CAGNNNCTG 1 cut(s) 967
Ama87I CYCGRG 1 cut(s) 61
Aor13HI TCCGGA 1 cut(s) 2443
Aor51HI AGCGCT 1 cut(s) 1003
AoxI GGCC 5 cut(s) 43, 57, 160, 1352, 2373
ApaLI GTGCAC 1 cut(s) 1384
ApeKI GCWGC 7 cut(s) 372, 485, 756, 1825, 1828, 2330, 2333
ApoI RAATTY 8 cut(s) 331, 569, 946, 1011, 1279, 1516, 2240, 2252
Asp700I GAANNNNTTC 3 cut(s) 1023, 1469, 2106
AspLEI GCGC 2 cut(s) 174, 1004
AspS9I GGNCC 4 cut(s) 129, 986, 2000, 2373
AsuC2I CCSGG 1 cut(s) 282
AsuHPI GGTGA 7 cut(s) 716, 846, 935, 1636, 1883, 2311, 2443
AsuII TTCGAA 1 cut(s) 809
AvaI CYCGRG 1 cut(s) 61
AvaII GGWCC 3 cut(s) 129, 986, 2000
BaeGI GKGCMC 1 cut(s) 1388
BaeI ACNNNNGTAYC 4 cut(s) 1674, 1707, 1941, 1974
BalI TGGCCA 1 cut(s) 1354
BanI GGYRCC 1 cut(s) 171
BanII GRGCYC 1 cut(s) 1542
BbrPI CACGTG 1 cut(s) 1391
BbsI GAAGAC 4 cut(s) 162, 208, 447, 1106
Bbv12I GWGCWC 3 cut(s) 1388, 2031, 2268
BbvCI CCTCAGC 1 cut(s) 916
BbvI GCAGC 7 cut(s) 384, 472, 768, 1812, 1840, 2320, 2342
BccI CCATC 4 cut(s) 292, 1231, 1889, 2396
BceAI ACGGC 3 cut(s) 58, 139, 175
BciT130I CCWGG 4 cut(s) 235, 753, 984, 2495
BciVI GTATCC 1 cut(s) 313
BclI TGATCA 1 cut(s) 763
BcnI CCSGG 1 cut(s) 282
BcoDI GTCTC 5 cut(s) 905, 969, 1211, 1784, 2177
BcuI ACTAGT 1 cut(s) 1961
BfaI CTAG 4 cut(s) 1322, 1434, 1962, 2072
BfmI CTRYAG 5 cut(s) 650, 1128, 1826, 1944, 2481
BfoI RGCGCY 2 cut(s) 175, 1005
BfuAI ACCTGC 1 cut(s) 865
BfuI GTATCC 1 cut(s) 313
BmcAI AGTACT 1 cut(s) 1068
Bme1390I CCNGG 5 cut(s) 235, 282, 753, 984, 2495
Bme18I GGWCC 3 cut(s) 129, 986, 2000
BmeRI GACNNNNNGTC 2 cut(s) 127, 2439
BmeT110I CYCGRG 1 cut(s) 61
BmgT120I GGNCC 4 cut(s) 129, 986, 2000, 2373
BmiI GGNNCC 4 cut(s) 130, 131, 173, 1293
BmrFI CCNGG 5 cut(s) 235, 282, 753, 984, 2495
BmsI GCATC 5 cut(s) 793, 1067, 1334, 1651, 2343
BpiI GAAGAC 4 cut(s) 162, 208, 447, 1106
BpmI CTGGAG 3 cut(s) 452, 989, 2447
Bpu10I CCTNAGC 1 cut(s) 916
Bpu14I TTCGAA 1 cut(s) 809
BpuEI CTTGAG 3 cut(s) 554, 667, 1590
BpuMI CCSGG 1 cut(s) 282
BsaAI YACGTR 3 cut(s) 1391, 1586, 1738
BsaBI GATNNNNATC 1 cut(s) 801
BsaHI GRCGYC 2 cut(s) 172, 213
BsaI GGTCTC 2 cut(s) 905, 1211
BsaJI CCNNGG 4 cut(s) 60, 1925, 2044, 2209
BsaWI WCCGGW 2 cut(s) 1494, 2443
Bsc4I CCNNNNNNNGG 7 cut(s) 52, 451, 1227, 1756, 1990, 2382, 2450
Bse118I RCCGGY 1 cut(s) 148
Bse1I ACTGG 6 cut(s) 608, 1074, 1720, 2002, 2282, 2430
Bse3DI GCAATG 2 cut(s) 367, 1170
Bse8I GATNNNNATC 1 cut(s) 801
BseAI TCCGGA 1 cut(s) 2443
BseBI CCWGG 4 cut(s) 235, 753, 984, 2495
BseDI CCNNGG 4 cut(s) 60, 1925, 2044, 2209
BseGI GGATG 8 cut(s) 303, 1090, 1246, 1325, 1503, 1666, 2344, 2395
BseJI GATNNNNATC 1 cut(s) 801
BseLI CCNNNNNNNGG 7 cut(s) 52, 451, 1227, 1756, 1990, 2382, 2450
BseMI GCAATG 2 cut(s) 367, 1170
BseMII CTCAG 8 cut(s) 282, 930, 955, 1110, 1110, 1541, 1623, 1874
BseNI ACTGG 6 cut(s) 608, 1074, 1720, 2002, 2282, 2430
BseRI GAGGAG 2 cut(s) 744, 1217
BseSI GKGCMC 1 cut(s) 1388
BseX3I CGGCCG 1 cut(s) 160
BseXI GCAGC 7 cut(s) 384, 472, 768, 1812, 1840, 2320, 2342
BsgI GTGCAG 1 cut(s) 2319
Bsh1236I CGCG 3 cut(s) 779, 2211, 2296
Bsh1285I CGRYCG 1 cut(s) 163
BshFI GGCC 5 cut(s) 45, 59, 162, 1354, 2375
BshNI GGYRCC 1 cut(s) 171
BsiEI CGRYCG 1 cut(s) 163
BsiHKAI GWGCWC 3 cut(s) 1388, 2031, 2268
BsiHKCI CYCGRG 1 cut(s) 61
BsiSI CCGG 6 cut(s) 149, 281, 1495, 1547, 1984, 2444
BslFI GGGAC 4 cut(s) 61, 78, 115, 1330
BslI CCNNNNNNNGG 7 cut(s) 52, 451, 1227, 1756, 1990, 2382, 2450
BsmAI GTCTC 5 cut(s) 905, 969, 1211, 1784, 2177
BsmFI GGGAC 4 cut(s) 61, 78, 115, 1330
BsnI GGCC 5 cut(s) 45, 59, 162, 1354, 2375
Bso31I GGTCTC 2 cut(s) 905, 1211
BsoBI CYCGRG 1 cut(s) 61
Bsp119I TTCGAA 1 cut(s) 809
Bsp1286I GDGCHC 4 cut(s) 1388, 1542, 2031, 2268
Bsp13I TCCGGA 1 cut(s) 2443
Bsp1407I TGTACA 3 cut(s) 613, 1006, 1590
Bsp143I GATC 8 cut(s) 763, 796, 802, 1147, 1651, 1811, 1914, 2315
BspANI GGCC 5 cut(s) 45, 59, 162, 1354, 2375
BspCNI CTCAG 8 cut(s) 283, 929, 954, 1109, 1111, 1540, 1624, 1873
BspEI TCCGGA 1 cut(s) 2443
BspFNI CGCG 3 cut(s) 779, 2211, 2296
BspLI GGNNCC 4 cut(s) 130, 131, 173, 1293
BspMAI CTGCAG 3 cut(s) 654, 1132, 1830
BspMI ACCTGC 1 cut(s) 865
BspPI GGATC 2 cut(s) 1819, 1922
BspQI GCTCTTC 1 cut(s) 98
BspT104I TTCGAA 1 cut(s) 809
BspT107I GGYRCC 1 cut(s) 171
BspTNI GGTCTC 2 cut(s) 905, 1211
BsrDI GCAATG 2 cut(s) 367, 1170
BsrFI RCCGGY 1 cut(s) 148
BsrGI TGTACA 3 cut(s) 613, 1006, 1590
BsrI ACTGG 6 cut(s) 608, 1074, 1720, 2002, 2282, 2430
BssAI RCCGGY 1 cut(s) 148
BssECI CCNNGG 4 cut(s) 60, 1925, 2044, 2209
BssMI GATC 8 cut(s) 763, 796, 802, 1147, 1651, 1811, 1914, 2315
BssNAI GTATAC 1 cut(s) 736
BssNI GRCGYC 2 cut(s) 172, 213
BssT1I CCWWGG 2 cut(s) 1925, 2044
Bst1107I GTATAC 1 cut(s) 736
Bst2UI CCWGG 4 cut(s) 235, 753, 984, 2495
Bst4CI ACNGT 5 cut(s) 267, 963, 1957, 2168, 2197
Bst6I CTCTTC 2 cut(s) 98, 1029
BstACI GRCGYC 2 cut(s) 172, 213
BstAPI GCANNNNNTGC 1 cut(s) 658
BstAUI TGTACA 3 cut(s) 613, 1006, 1590
BstBAI YACGTR 3 cut(s) 1391, 1586, 1738
BstBI TTCGAA 1 cut(s) 809
BstC8I GCNNGC 9 cut(s) 47, 89, 150, 167, 201, 507, 1559, 2461, 2512
BstDEI CTNAG 9 cut(s) 291, 481, 916, 941, 1096, 1119, 1527, 1632, 1860
BstDSI CCRYGG 1 cut(s) 2209
BstEII GGTNACC 1 cut(s) 2431
BstF5I GGATG 8 cut(s) 303, 1090, 1246, 1325, 1503, 1666, 2344, 2395
BstFNI CGCG 3 cut(s) 779, 2211, 2296
BstH2I RGCGCY 2 cut(s) 175, 1005
BstHHI GCGC 2 cut(s) 174, 1004
BstKTI GATC 8 cut(s) 766, 799, 805, 1150, 1654, 1814, 1917, 2318
BstMAI GTCTC 5 cut(s) 905, 969, 1211, 1784, 2177
BstMBI GATC 8 cut(s) 763, 796, 802, 1147, 1651, 1811, 1914, 2315
BstMCI CGRYCG 1 cut(s) 163
BstMWI GCNNNNNNNGC 3 cut(s) 123, 171, 658
BstNI CCWGG 4 cut(s) 235, 753, 984, 2495
BstNSI RCATGY 1 cut(s) 2463
BstPI GGTNACC 1 cut(s) 2431
BstSCI CCNGG 5 cut(s) 233, 280, 751, 982, 2493
BstSFI CTRYAG 5 cut(s) 650, 1128, 1826, 1944, 2481
BstSLI GKGCMC 1 cut(s) 1388
BstSNI TACGTA 1 cut(s) 1738
BstUI CGCG 3 cut(s) 779, 2211, 2296
BstV1I GCAGC 7 cut(s) 384, 472, 768, 1812, 1840, 2320, 2342
BstV2I GAAGAC 4 cut(s) 162, 208, 447, 1106
BstX2I RGATCY 2 cut(s) 1811, 1914
BstYI RGATCY 2 cut(s) 1811, 1914
BstZ17I GTATAC 1 cut(s) 736
BstZI CGGCCG 1 cut(s) 160
BsuI GTATCC 1 cut(s) 313
BsuRI GGCC 5 cut(s) 45, 59, 162, 1354, 2375
BtgI CCRYGG 1 cut(s) 2209
BtgZI GCGATG 2 cut(s) 642, 1284
BtsCI GGATG 8 cut(s) 303, 1090, 1246, 1325, 1503, 1666, 2344, 2395
BtsI GCAGTG 1 cut(s) 720
BtsIMutI CAGTG 5 cut(s) 720, 792, 1044, 1593, 1647
BveI ACCTGC 1 cut(s) 865
Cac8I GCNNGC 9 cut(s) 47, 89, 150, 167, 201, 507, 1559, 2461, 2512
CaiI CAGNNNCTG 1 cut(s) 967
CfoI GCGC 2 cut(s) 174, 1004
Cfr10I RCCGGY 1 cut(s) 148
Cfr13I GGNCC 4 cut(s) 129, 986, 2000, 2373
Cfr42I CCGCGG 1 cut(s) 2212
CseI GACGC 1 cut(s) 263
Csp6I GTAC 9 cut(s) 614, 1007, 1067, 1174, 1591, 1683, 1735, 1883, 2342
CviQI GTAC 9 cut(s) 614, 1007, 1067, 1174, 1591, 1683, 1735, 1883, 2342
DdeI CTNAG 9 cut(s) 291, 481, 916, 941, 1096, 1119, 1527, 1632, 1860
DinI GGCGCC 1 cut(s) 173
DpnI GATC 8 cut(s) 765, 798, 804, 1149, 1653, 1813, 1916, 2317
DpnII GATC 8 cut(s) 763, 796, 802, 1147, 1651, 1811, 1914, 2315
DriI GACNNNNNGTC 2 cut(s) 127, 2439
EaeI YGGCCR 2 cut(s) 160, 1352
EagI CGGCCG 1 cut(s) 160
Eam1104I CTCTTC 2 cut(s) 98, 1029
Eam1105I GACNNNNNGTC 2 cut(s) 127, 2439
EarI CTCTTC 2 cut(s) 98, 1029
EciI GGCGGA 3 cut(s) 167, 233, 653
EclXI CGGCCG 1 cut(s) 160
Eco105I TACGTA 1 cut(s) 1738
Eco130I CCWWGG 2 cut(s) 1925, 2044
Eco24I GRGCYC 1 cut(s) 1542
Eco31I GGTCTC 2 cut(s) 905, 1211
Eco32I GATATC 2 cut(s) 1669, 2062
Eco47I GGWCC 3 cut(s) 129, 986, 2000
Eco47III AGCGCT 1 cut(s) 1003
Eco52I CGGCCG 1 cut(s) 160
Eco57I CTGAAG 2 cut(s) 426, 1676
Eco72I CACGTG 1 cut(s) 1391
Eco88I CYCGRG 1 cut(s) 61
Eco91I GGTNACC 1 cut(s) 2431
EcoO109I RGGNCCY 1 cut(s) 129
EcoO65I GGTNACC 1 cut(s) 2431
EcoRI GAATTC 1 cut(s) 331
EcoRII CCWGG 4 cut(s) 233, 751, 982, 2493
EcoRV GATATC 2 cut(s) 1669, 2062
EcoT14I CCWWGG 2 cut(s) 1925, 2044
EcoT22I ATGCAT 2 cut(s) 1060, 2358
EcoT38I GRGCYC 1 cut(s) 1542
EgeI GGCGCC 1 cut(s) 173
EheI GGCGCC 1 cut(s) 173
ErhI CCWWGG 2 cut(s) 1925, 2044
FaqI GGGAC 4 cut(s) 61, 78, 115, 1330
FauI CCCGC 4 cut(s) 119, 208, 913, 2289
FauNDI CATATG 1 cut(s) 1673
FbaI TGATCA 1 cut(s) 763
FblI GTMKAC 2 cut(s) 225, 735
FokI GGATG 8 cut(s) 310, 1097, 1253, 1312, 1510, 1673, 2331, 2402
FriOI GRGCYC 1 cut(s) 1542
FspBI CTAG 4 cut(s) 1322, 1434, 1962, 2072
GlaI GCGC 2 cut(s) 173, 1003
GsuI CTGGAG 3 cut(s) 452, 989, 2447
HaeII RGCGCY 2 cut(s) 175, 1005
HaeIII GGCC 5 cut(s) 45, 59, 162, 1354, 2375
HapII CCGG 6 cut(s) 149, 281, 1495, 1547, 1984, 2444
HgaI GACGC 1 cut(s) 263
HhaI GCGC 2 cut(s) 174, 1004
Hin1I GRCGYC 2 cut(s) 172, 213
Hin6I GCGC 2 cut(s) 172, 1002
HinP1I GCGC 2 cut(s) 172, 1002
HincII GTYRAC 3 cut(s) 226, 1093, 2275
HindII GTYRAC 3 cut(s) 226, 1093, 2275
HindIII AAGCTT 3 cut(s) 101, 530, 585
HpaI GTTAAC 1 cut(s) 2275
HpaII CCGG 6 cut(s) 149, 281, 1495, 1547, 1984, 2444
HphI GGTGA 7 cut(s) 716, 846, 935, 1636, 1883, 2311, 2443
Hpy99I CGWCG 4 cut(s) 125, 215, 227, 257
HpyAV CCTTC 4 cut(s) 963, 1651, 1702, 2448
HpyCH4III ACNGT 5 cut(s) 267, 963, 1957, 2168, 2197
HpyCH4IV ACGT 6 cut(s) 213, 1184, 1390, 1426, 1585, 1737
HpyF10VI GCNNNNNNNGC 3 cut(s) 123, 171, 658
HpyF3I CTNAG 9 cut(s) 291, 481, 916, 941, 1096, 1119, 1527, 1632, 1860
HpySE526I ACGT 6 cut(s) 213, 1184, 1390, 1426, 1585, 1737
Hsp92I GRCGYC 2 cut(s) 172, 213
HspAI GCGC 2 cut(s) 172, 1002
KasI GGCGCC 1 cut(s) 171
KflI GGGWCCC 1 cut(s) 129
Kpn2I TCCGGA 1 cut(s) 2443
KroI GCCGGC 1 cut(s) 148
KroNI GCCGGC 1 cut(s) 150
Ksp22I TGATCA 1 cut(s) 763
KspAI GTTAAC 1 cut(s) 2275
KspI CCGCGG 1 cut(s) 2212
Kzo9I GATC 8 cut(s) 763, 796, 802, 1147, 1651, 1811, 1914, 2315
LguI GCTCTTC 1 cut(s) 98
LmnI GCTCC 3 cut(s) 433, 1297, 2263
Lsp1109I GCAGC 7 cut(s) 384, 472, 768, 1812, 1840, 2320, 2342
LweI GCATC 5 cut(s) 793, 1067, 1334, 1651, 2343
MaeI CTAG 4 cut(s) 1322, 1434, 1962, 2072
MaeII ACGT 6 cut(s) 213, 1184, 1390, 1426, 1585, 1737
MaeIII GTNAC 8 cut(s) 562, 790, 923, 930, 1957, 2299, 2421, 2431
MalI GATC 8 cut(s) 765, 798, 804, 1149, 1653, 1813, 1916, 2317
MboI GATC 8 cut(s) 763, 796, 802, 1147, 1651, 1811, 1914, 2315
MflI RGATCY 2 cut(s) 1811, 1914
MhlI GDGCHC 4 cut(s) 1388, 1542, 2031, 2268
MlsI TGGCCA 1 cut(s) 1354
MluNI TGGCCA 1 cut(s) 1354
Mly113I GGCGCC 1 cut(s) 172
MlyI GAGTC 5 cut(s) 185, 673, 1088, 1618, 2179
MmeI TCCRAC 6 cut(s) 213, 234, 276, 2262, 2387, 2467
Mox20I TGGCCA 1 cut(s) 1354
Mph1103I ATGCAT 2 cut(s) 1060, 2358
MroI TCCGGA 1 cut(s) 2443
MroNI GCCGGC 1 cut(s) 148
MroXI GAANNNNTTC 3 cut(s) 1023, 1469, 2106
MscI TGGCCA 1 cut(s) 1354
MseI TTAA 6 cut(s) 1053, 1178, 1902, 1919, 2274, 2578
MslI CAYNNNNRTG 1 cut(s) 1269
Msp20I TGGCCA 1 cut(s) 1354
MspA1I CMGCKG 5 cut(s) 169, 920, 1331, 2211, 2333
MspI CCGG 6 cut(s) 149, 281, 1495, 1547, 1984, 2444
MspR9I CCNGG 5 cut(s) 235, 282, 753, 984, 2495
MvaI CCWGG 4 cut(s) 235, 753, 984, 2495
MvnI CGCG 3 cut(s) 779, 2211, 2296
MwoI GCNNNNNNNGC 3 cut(s) 123, 171, 658
NaeI GCCGGC 1 cut(s) 150
NarI GGCGCC 1 cut(s) 172
NciI CCSGG 1 cut(s) 282
NdeI CATATG 1 cut(s) 1673
NdeII GATC 8 cut(s) 763, 796, 802, 1147, 1651, 1811, 1914, 2315
NgoMIV GCCGGC 1 cut(s) 148
NlaIV GGNNCC 4 cut(s) 130, 131, 173, 1293
NmeAIII GCCGAG 1 cut(s) 687
NmuCI GTSAC 5 cut(s) 790, 923, 1957, 2299, 2431
NsiI ATGCAT 2 cut(s) 1060, 2358
NspI RCATGY 1 cut(s) 2463
NspV TTCGAA 1 cut(s) 809
PaeI GCATGC 1 cut(s) 2463
PaqCI CACCTGC 1 cut(s) 865
PciSI GCTCTTC 1 cut(s) 98
PcsI WCGNNNNNNNCGW 3 cut(s) 18, 27, 219
PdiI GCCGGC 1 cut(s) 150
PdmI GAANNNNTTC 3 cut(s) 1023, 1469, 2106
PfeI GAWTC 5 cut(s) 338, 349, 886, 1019, 2221
PflFI GACNNNGTC 1 cut(s) 29
PfoI TCCNGGA 1 cut(s) 280
PleI GAGTC 5 cut(s) 185, 672, 1088, 1618, 2179
PluTI GGCGCC 1 cut(s) 175
PmaCI CACGTG 1 cut(s) 1391
PmlI CACGTG 1 cut(s) 1391
PpsI GAGTC 5 cut(s) 185, 672, 1088, 1618, 2179
Ppu21I YACGTR 3 cut(s) 1391, 1586, 1738
PpuMI RGGWCCY 1 cut(s) 129
PsiI TTATAA 1 cut(s) 1157
Psp1406I AACGTT 1 cut(s) 1426
Psp5II RGGWCCY 1 cut(s) 129
Psp6I CCWGG 4 cut(s) 233, 751, 982, 2493
PspCI CACGTG 1 cut(s) 1391
PspEI GGTNACC 1 cut(s) 2431
PspGI CCWGG 4 cut(s) 233, 751, 982, 2493
PspN4I GGNNCC 4 cut(s) 130, 131, 173, 1293
PspPI GGNCC 4 cut(s) 129, 986, 2000, 2373
PspPPI RGGWCCY 1 cut(s) 129
PsrI GAACNNNNNNTAC 2 cut(s) 1933, 1965
PstI CTGCAG 3 cut(s) 654, 1132, 1830
PstNI CAGNNNCTG 1 cut(s) 967
PsuI RGATCY 2 cut(s) 1811, 1914
PsyI GACNNNGTC 1 cut(s) 29
PvuII CAGCTG 1 cut(s) 2333
RsaI GTAC 9 cut(s) 615, 1008, 1068, 1175, 1592, 1684, 1736, 1884, 2343
RsaNI GTAC 9 cut(s) 614, 1007, 1067, 1174, 1591, 1683, 1735, 1883, 2342
RseI CAYNNNNRTG 1 cut(s) 1269
SacII CCGCGG 1 cut(s) 2212
SalI GTCGAC 1 cut(s) 224
SapI GCTCTTC 1 cut(s) 98
SaqAI TTAA 6 cut(s) 1053, 1178, 1902, 1919, 2274, 2578
Sau3AI GATC 8 cut(s) 763, 796, 802, 1147, 1651, 1811, 1914, 2315
Sau96I GGNCC 4 cut(s) 129, 986, 2000, 2373
ScaI AGTACT 1 cut(s) 1068
SchI GAGTC 5 cut(s) 185, 673, 1088, 1618, 2179
ScrFI CCNGG 5 cut(s) 235, 282, 753, 984, 2495
SduI GDGCHC 4 cut(s) 1388, 1542, 2031, 2268
SfaNI GCATC 5 cut(s) 793, 1067, 1334, 1651, 2343
SfcI CTRYAG 5 cut(s) 650, 1128, 1826, 1944, 2481
SfoI GGCGCC 1 cut(s) 173
Sfr303I CCGCGG 1 cut(s) 2212
SfuI TTCGAA 1 cut(s) 809
SgrBI CCGCGG 1 cut(s) 2212
SinI GGWCC 3 cut(s) 129, 986, 2000
SmiMI CAYNNNNRTG 1 cut(s) 1269
SmlI CTYRAG 3 cut(s) 533, 682, 1605
SmoI CTYRAG 3 cut(s) 533, 682, 1605
SnaBI TACGTA 1 cut(s) 1738
SpeI ACTAGT 1 cut(s) 1961
SphI GCATGC 1 cut(s) 2463
SspDI GGCGCC 1 cut(s) 171
SspI AATATT 1 cut(s) 2150
SspMI CTAG 4 cut(s) 1322, 1434, 1962, 2072
StyD4I CCNGG 5 cut(s) 233, 280, 751, 982, 2493
StyI CCWWGG 2 cut(s) 1925, 2044
TaaI ACNGT 5 cut(s) 267, 963, 1957, 2168, 2197
TaiI ACGT 6 cut(s) 216, 1187, 1393, 1429, 1588, 1740
TaqI TCGA 9 cut(s) 5, 12, 120, 144, 225, 809, 1189, 1477, 2369
TatI WGTACW 6 cut(s) 613, 1006, 1066, 1173, 1590, 2341
TauI GCSGC 6 cut(s) 59, 165, 172, 305, 1264, 2214
TfiI GAWTC 5 cut(s) 338, 349, 886, 1019, 2221
Tru1I TTAA 6 cut(s) 1053, 1178, 1902, 1919, 2274, 2578
Tru9I TTAA 6 cut(s) 1053, 1178, 1902, 1919, 2274, 2578
TscAI CASTG 5 cut(s) 720, 799, 1044, 1600, 1654
TseFI GTSAC 5 cut(s) 790, 923, 1957, 2299, 2431
TseI GCWGC 7 cut(s) 372, 485, 756, 1825, 1828, 2330, 2333
Tsp45I GTSAC 5 cut(s) 790, 923, 1957, 2299, 2431
TspGWI ACGGA 1 cut(s) 891
TspRI CASTG 5 cut(s) 720, 799, 1044, 1600, 1654
Tth111I GACNNNGTC 1 cut(s) 29
VneI GTGCAC 1 cut(s) 1384
VpaK11BI GGWCC 3 cut(s) 129, 986, 2000
XapI RAATTY 8 cut(s) 331, 569, 946, 1011, 1279, 1516, 2240, 2252
XceI RCATGY 1 cut(s) 2463
XcmI CCANNNNNNNNNTGG 1 cut(s) 2383
XmiI GTMKAC 2 cut(s) 225, 735
XmnI GAANNNNTTC 3 cut(s) 1023, 1469, 2106
XspI CTAG 4 cut(s) 1322, 1434, 1962, 2072
ZraI GACGTC 1 cut(s) 214
ZrmI AGTACT 1 cut(s) 1068
Zsp2I ATGCAT 2 cut(s) 1060, 2358
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.