Tubulin--tyrosine ligase-like protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G77550 |
| fragaria_vesca | FvH4_1g08650 FvH4_1g08650 |
| malus_domestica | MD15G1217600.v1.1 |
| prunus_persica | Prupe.7G198800_v2.0.a1 |
| pyrus_communis | pycom15g19320 |
| rosa_chinensis | RchiOBHm_Chr2g0094931 |
| rosa_laevigata | RLG00000016532 |
| rosa_multiflora | Rmu_sc0004316.1_g000014 |
| rosa_roxburghii | Rroxscaffold_2G00146760 |
| rosa_rugosa | Rorug02G0048900 |
| rosa_samantha | Rh2AG095700 Rh2CG098600 Rh2DG095300 |
| rosa_wichuraiana | Rw2G007200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1166, 2532 |
| AatII | GACGTC | 1 cut(s) | 228 |
| Acc36I | ACCTGC | 1 cut(s) | 2896 |
| AccIII | TCCGGA | 1 cut(s) | 1639 |
| AclI | AACGTT | 1 cut(s) | 1435 |
| AclWI | GGATC | 8 cut(s) | 819, 1655, 1828, 1931, 2314, 2640, 2747, 2856 |
| AcoI | YGGCCR | 4 cut(s) | 172, 930, 1361, 2742 |
| AcsI | RAATTY | 7 cut(s) | 343, 841, 955, 1020, 1288, 2249, 2525 |
| AcuI | CTGAAG | 1 cut(s) | 1097 |
| AcyI | GRCGYC | 1 cut(s) | 225 |
| AfaI | GTAC | 8 cut(s) | 192, 402, 948, 1050, 1601, 1893, 2461, 2694 |
| AfeI | AGCGCT | 2 cut(s) | 603, 1110 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 537, 717 |
| AflIII | ACRYGT | 3 cut(s) | 1594, 1634, 2241 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 139, 2448 |
| AjiI | CACGTC | 3 cut(s) | 1121, 1637, 2244 |
| AjnI | CCWGG | 4 cut(s) | 245, 511, 991, 2786 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1775, 1807 |
| Alw21I | GWGCWC | 6 cut(s) | 1015, 2040, 2277, 2355, 2521, 2786 |
| Alw26I | GTCTC | 8 cut(s) | 914, 978, 1220, 1305, 1997, 2186, 2555, 2927 |
| Alw44I | GTGCAC | 1 cut(s) | 2351 |
| AlwI | GGATC | 8 cut(s) | 819, 1655, 1828, 1931, 2314, 2640, 2747, 2856 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 91, 976, 1802 |
| Ama87I | CYCGRG | 1 cut(s) | 73 |
| Aor13HI | TCCGGA | 1 cut(s) | 1639 |
| Aor51HI | AGCGCT | 2 cut(s) | 603, 1110 |
| AoxI | GGCC | 7 cut(s) | 69, 172, 930, 994, 1361, 2742, 2917 |
| ApaLI | GTGCAC | 1 cut(s) | 2351 |
| ApeKI | GCWGC | 6 cut(s) | 387, 771, 799, 1837, 2339, 2342 |
| ApoI | RAATTY | 7 cut(s) | 343, 841, 955, 1020, 1288, 2249, 2525 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 27, 59 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1032, 2115 |
| AspLEI | GCGC | 3 cut(s) | 183, 604, 1111 |
| AspS9I | GGNCC | 6 cut(s) | 141, 249, 995, 2009, 2289, 2735 |
| AsuC2I | CCSGG | 2 cut(s) | 294, 768 |
| AsuHPI | GGTGA | 5 cut(s) | 187, 386, 1703, 1892, 2452 |
| AsuII | TTCGAA | 1 cut(s) | 2265 |
| AvaI | CYCGRG | 1 cut(s) | 73 |
| AvaII | GGWCC | 5 cut(s) | 141, 249, 2009, 2289, 2735 |
| BaeGI | GKGCMC | 3 cut(s) | 512, 730, 2355 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1950, 1983 |
| BalI | TGGCCA | 1 cut(s) | 1363 |
| BanII | GRGCYC | 2 cut(s) | 162, 2521 |
| BauI | CACGAG | 2 cut(s) | 1398, 2520 |
| BbsI | GAAGAC | 4 cut(s) | 42, 220, 1115, 2952 |
| Bbv12I | GWGCWC | 6 cut(s) | 1015, 2040, 2277, 2355, 2521, 2786 |
| BbvCI | CCTCAGC | 1 cut(s) | 2877 |
| BbvI | GCAGC | 6 cut(s) | 399, 783, 811, 1849, 2329, 2351 |
| BccI | CCATC | 5 cut(s) | 1240, 1537, 1898, 2895, 2939 |
| BceAI | ACGGC | 4 cut(s) | 70, 151, 187, 2729 |
| BciT130I | CCWGG | 4 cut(s) | 247, 513, 993, 2788 |
| BcnI | CCSGG | 2 cut(s) | 294, 768 |
| BcoDI | GTCTC | 8 cut(s) | 914, 978, 1220, 1305, 1997, 2186, 2555, 2927 |
| BfaI | CTAG | 5 cut(s) | 1016, 1256, 2304, 2727, 2852 |
| BfmI | CTRYAG | 1 cut(s) | 1953 |
| BfoI | RGCGCY | 3 cut(s) | 184, 605, 1112 |
| BfuAI | ACCTGC | 1 cut(s) | 2896 |
| Bme1390I | CCNGG | 6 cut(s) | 247, 294, 513, 768, 993, 2788 |
| Bme18I | GGWCC | 5 cut(s) | 141, 249, 2009, 2289, 2735 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 139, 2448 |
| BmeT110I | CYCGRG | 1 cut(s) | 73 |
| BmgBI | CACGTC | 3 cut(s) | 1121, 1637, 2244 |
| BmgT120I | GGNCC | 6 cut(s) | 141, 249, 995, 2009, 2289, 2735 |
| BmiI | GGNNCC | 5 cut(s) | 142, 143, 205, 1460, 2737 |
| BmrFI | CCNGG | 6 cut(s) | 247, 294, 513, 768, 993, 2788 |
| BmrI | ACTGGG | 2 cut(s) | 79, 740 |
| BmsI | GCATC | 7 cut(s) | 367, 1076, 1343, 1660, 1795, 1824, 2352 |
| BmuI | ACTGGG | 2 cut(s) | 79, 740 |
| BpiI | GAAGAC | 4 cut(s) | 42, 220, 1115, 2952 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 149, 181 |
| BpmI | CTGGAG | 4 cut(s) | 86, 998, 2456, 2798 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2877 |
| Bpu14I | TTCGAA | 1 cut(s) | 2265 |
| BpuEI | CTTGAG | 1 cut(s) | 1599 |
| BpuMI | CCSGG | 2 cut(s) | 294, 768 |
| BsaAI | YACGTR | 2 cut(s) | 1595, 1895 |
| BsaBI | GATNNNNATC | 1 cut(s) | 816 |
| BsaHI | GRCGYC | 1 cut(s) | 225 |
| BsaI | GGTCTC | 2 cut(s) | 914, 1220 |
| BsaJI | CCNNGG | 6 cut(s) | 72, 511, 1934, 2739, 2745, 2971 |
| BsaWI | WCCGGW | 1 cut(s) | 1639 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1522, 1552, 2493, 2523 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 537, 717 |
| Bse118I | RCCGGY | 1 cut(s) | 10 |
| Bse3DI | GCAATG | 4 cut(s) | 649, 794, 1179, 2640 |
| Bse8I | GATNNNNATC | 1 cut(s) | 816 |
| BseAI | TCCGGA | 1 cut(s) | 1639 |
| BseBI | CCWGG | 4 cut(s) | 247, 513, 993, 2788 |
| BseDI | CCNNGG | 6 cut(s) | 72, 511, 1934, 2739, 2745, 2971 |
| BseGI | GGATG | 7 cut(s) | 1213, 1255, 1675, 1708, 1839, 2404, 2906 |
| BseJI | GATNNNNATC | 1 cut(s) | 816 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 537, 717 |
| BseMI | GCAATG | 4 cut(s) | 649, 794, 1179, 2640 |
| BseMII | CTCAG | 8 cut(s) | 294, 356, 1119, 1818, 2349, 2585, 2814, 2868 |
| BseRI | GAGGAG | 2 cut(s) | 759, 1527 |
| BseSI | GKGCMC | 3 cut(s) | 512, 730, 2355 |
| BseX3I | CGGCCG | 1 cut(s) | 172 |
| BseXI | GCAGC | 6 cut(s) | 399, 783, 811, 1849, 2329, 2351 |
| BseYI | CCCAGC | 1 cut(s) | 2041 |
| BsgI | GTGCAG | 1 cut(s) | 77 |
| Bsh1285I | CGRYCG | 2 cut(s) | 175, 2327 |
| BshFI | GGCC | 7 cut(s) | 71, 174, 932, 996, 1363, 2744, 2919 |
| BsiEI | CGRYCG | 2 cut(s) | 175, 2327 |
| BsiHKAI | GWGCWC | 6 cut(s) | 1015, 2040, 2277, 2355, 2521, 2786 |
| BsiHKCI | CYCGRG | 1 cut(s) | 73 |
| BsiSI | CCGG | 5 cut(s) | 11, 201, 293, 767, 1640 |
| BslFI | GGGAC | 4 cut(s) | 73, 127, 1339, 2236 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 537, 717 |
| BsmAI | GTCTC | 8 cut(s) | 914, 978, 1220, 1305, 1997, 2186, 2555, 2927 |
| BsmFI | GGGAC | 4 cut(s) | 73, 127, 1339, 2236 |
| BsmI | GAATGC | 1 cut(s) | 1397 |
| BsnI | GGCC | 7 cut(s) | 71, 174, 932, 996, 1363, 2744, 2919 |
| Bso31I | GGTCTC | 2 cut(s) | 914, 1220 |
| BsoBI | CYCGRG | 1 cut(s) | 73 |
| Bsp119I | TTCGAA | 1 cut(s) | 2265 |
| Bsp1286I | GDGCHC | 9 cut(s) | 162, 512, 730, 1015, 2040, 2277, 2355, 2521, 2786 |
| Bsp13I | TCCGGA | 1 cut(s) | 1639 |
| Bsp1407I | TGTACA | 1 cut(s) | 2459 |
| BspANI | GGCC | 7 cut(s) | 71, 174, 932, 996, 1363, 2744, 2919 |
| BspCNI | CTCAG | 8 cut(s) | 295, 357, 1120, 1819, 2350, 2586, 2815, 2869 |
| BspEI | TCCGGA | 1 cut(s) | 1639 |
| BspHI | TCATGA | 1 cut(s) | 1779 |
| BspLI | GGNNCC | 5 cut(s) | 142, 143, 205, 1460, 2737 |
| BspMI | ACCTGC | 1 cut(s) | 2896 |
| BspPI | GGATC | 8 cut(s) | 819, 1655, 1828, 1931, 2314, 2640, 2747, 2856 |
| BspQI | GCTCTTC | 1 cut(s) | 110 |
| BspT104I | TTCGAA | 1 cut(s) | 2265 |
| BspTNI | GGTCTC | 2 cut(s) | 914, 1220 |
| BsrDI | GCAATG | 4 cut(s) | 649, 794, 1179, 2640 |
| BsrFI | RCCGGY | 1 cut(s) | 10 |
| BsrGI | TGTACA | 1 cut(s) | 2459 |
| BssAI | RCCGGY | 1 cut(s) | 10 |
| BssECI | CCNNGG | 6 cut(s) | 72, 511, 1934, 2739, 2745, 2971 |
| BssNI | GRCGYC | 1 cut(s) | 225 |
| BssSI | CACGAG | 2 cut(s) | 1398, 2520 |
| BssT1I | CCWWGG | 2 cut(s) | 1934, 2971 |
| Bst2BI | CACGAG | 2 cut(s) | 1398, 2520 |
| Bst2UI | CCWGG | 4 cut(s) | 247, 513, 993, 2788 |
| Bst6I | CTCTTC | 5 cut(s) | 110, 345, 912, 1038, 1206 |
| BstACI | GRCGYC | 1 cut(s) | 225 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1513 |
| BstAUI | TGTACA | 1 cut(s) | 2459 |
| BstBAI | YACGTR | 2 cut(s) | 1595, 1895 |
| BstBI | TTCGAA | 1 cut(s) | 2265 |
| BstC8I | GCNNGC | 6 cut(s) | 59, 101, 179, 316, 1518, 2470 |
| BstDSI | CCRYGG | 2 cut(s) | 2739, 2745 |
| BstEII | GGTNACC | 1 cut(s) | 1691 |
| BstF5I | GGATG | 7 cut(s) | 1213, 1255, 1675, 1708, 1839, 2404, 2906 |
| BstH2I | RGCGCY | 3 cut(s) | 184, 605, 1112 |
| BstHHI | GCGC | 3 cut(s) | 183, 604, 1111 |
| BstMAI | GTCTC | 8 cut(s) | 914, 978, 1220, 1305, 1997, 2186, 2555, 2927 |
| BstMCI | CGRYCG | 2 cut(s) | 175, 2327 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 100, 180, 183, 1513, 2495 |
| BstNI | CCWGG | 4 cut(s) | 247, 513, 993, 2788 |
| BstNSI | RCATGY | 2 cut(s) | 1097, 2472 |
| BstPI | GGTNACC | 1 cut(s) | 1691 |
| BstSCI | CCNGG | 6 cut(s) | 245, 292, 511, 766, 991, 2786 |
| BstSFI | CTRYAG | 1 cut(s) | 1953 |
| BstSLI | GKGCMC | 3 cut(s) | 512, 730, 2355 |
| BstSNI | TACGTA | 1 cut(s) | 1895 |
| BstV1I | GCAGC | 6 cut(s) | 399, 783, 811, 1849, 2329, 2351 |
| BstV2I | GAAGAC | 4 cut(s) | 42, 220, 1115, 2952 |
| BstX2I | RGATCY | 5 cut(s) | 811, 1820, 1923, 2645, 2848 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1877 |
| BstYI | RGATCY | 5 cut(s) | 811, 1820, 1923, 2645, 2848 |
| BstZI | CGGCCG | 1 cut(s) | 172 |
| BsuRI | GGCC | 7 cut(s) | 71, 174, 932, 996, 1363, 2744, 2919 |
| BtgI | CCRYGG | 2 cut(s) | 2739, 2745 |
| BtrI | CACGTC | 3 cut(s) | 1121, 1637, 2244 |
| BtsCI | GGATG | 7 cut(s) | 1213, 1255, 1675, 1708, 1839, 2404, 2906 |
| BtsIMutI | CAGTG | 5 cut(s) | 728, 926, 1501, 1968, 2225 |
| BveI | ACCTGC | 1 cut(s) | 2896 |
| Cac8I | GCNNGC | 6 cut(s) | 59, 101, 179, 316, 1518, 2470 |
| CaiI | CAGNNNCTG | 3 cut(s) | 91, 976, 1802 |
| CciI | TCATGA | 1 cut(s) | 1779 |
| CfoI | GCGC | 3 cut(s) | 183, 604, 1111 |
| Cfr10I | RCCGGY | 1 cut(s) | 10 |
| Cfr13I | GGNCC | 6 cut(s) | 141, 249, 995, 2009, 2289, 2735 |
| Csp6I | GTAC | 8 cut(s) | 191, 401, 947, 1049, 1600, 1892, 2460, 2693 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 697, 732 |
| CviQI | GTAC | 8 cut(s) | 191, 401, 947, 1049, 1600, 1892, 2460, 2693 |
| DraI | TTTAAA | 1 cut(s) | 1569 |
| DriI | GACNNNNNGTC | 2 cut(s) | 139, 2448 |
| EaeI | YGGCCR | 4 cut(s) | 172, 930, 1361, 2742 |
| EagI | CGGCCG | 1 cut(s) | 172 |
| Eam1104I | CTCTTC | 5 cut(s) | 110, 345, 912, 1038, 1206 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 139, 2448 |
| EarI | CTCTTC | 5 cut(s) | 110, 345, 912, 1038, 1206 |
| EciI | GGCGGA | 2 cut(s) | 245, 2908 |
| Ecl136II | GAGCTC | 1 cut(s) | 2519 |
| EclXI | CGGCCG | 1 cut(s) | 172 |
| Eco105I | TACGTA | 1 cut(s) | 1895 |
| Eco130I | CCWWGG | 2 cut(s) | 1934, 2971 |
| Eco147I | AGGCCT | 1 cut(s) | 71 |
| Eco24I | GRGCYC | 2 cut(s) | 162, 2521 |
| Eco31I | GGTCTC | 2 cut(s) | 914, 1220 |
| Eco32I | GATATC | 2 cut(s) | 1609, 2071 |
| Eco47I | GGWCC | 5 cut(s) | 141, 249, 2009, 2289, 2735 |
| Eco47III | AGCGCT | 2 cut(s) | 603, 1110 |
| Eco52I | CGGCCG | 1 cut(s) | 172 |
| Eco53kI | GAGCTC | 1 cut(s) | 2519 |
| Eco57I | CTGAAG | 1 cut(s) | 1097 |
| Eco88I | CYCGRG | 1 cut(s) | 73 |
| Eco91I | GGTNACC | 1 cut(s) | 1691 |
| EcoICRI | GAGCTC | 1 cut(s) | 2519 |
| EcoO109I | RGGNCCY | 1 cut(s) | 141 |
| EcoO65I | GGTNACC | 1 cut(s) | 1691 |
| EcoRI | GAATTC | 1 cut(s) | 343 |
| EcoRII | CCWGG | 4 cut(s) | 245, 511, 991, 2786 |
| EcoRV | GATATC | 2 cut(s) | 1609, 2071 |
| EcoT14I | CCWWGG | 2 cut(s) | 1934, 2971 |
| EcoT22I | ATGCAT | 1 cut(s) | 1069 |
| EcoT38I | GRGCYC | 2 cut(s) | 162, 2521 |
| ErhI | CCWWGG | 2 cut(s) | 1934, 2971 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1516, 1548 |
| FaqI | GGGAC | 4 cut(s) | 73, 127, 1339, 2236 |
| FauI | CCCGC | 1 cut(s) | 131 |
| FokI | GGATG | 7 cut(s) | 1220, 1262, 1682, 1715, 1846, 2411, 2913 |
| FriOI | GRGCYC | 2 cut(s) | 162, 2521 |
| FspBI | CTAG | 5 cut(s) | 1016, 1256, 2304, 2727, 2852 |
| GlaI | GCGC | 3 cut(s) | 182, 603, 1110 |
| GsaI | CCCAGC | 1 cut(s) | 2045 |
| GsuI | CTGGAG | 4 cut(s) | 86, 998, 2456, 2798 |
| HaeII | RGCGCY | 3 cut(s) | 184, 605, 1112 |
| HaeIII | GGCC | 7 cut(s) | 71, 174, 932, 996, 1363, 2744, 2919 |
| HapII | CCGG | 5 cut(s) | 11, 201, 293, 767, 1640 |
| HhaI | GCGC | 3 cut(s) | 183, 604, 1111 |
| Hin1I | GRCGYC | 1 cut(s) | 225 |
| Hin6I | GCGC | 3 cut(s) | 181, 602, 1109 |
| HinP1I | GCGC | 3 cut(s) | 181, 602, 1109 |
| HincII | GTYRAC | 1 cut(s) | 238 |
| HindII | GTYRAC | 1 cut(s) | 238 |
| HindIII | AAGCTT | 3 cut(s) | 113, 267, 1719 |
| HpaII | CCGG | 5 cut(s) | 11, 201, 293, 767, 1640 |
| HphI | GGTGA | 5 cut(s) | 187, 386, 1703, 1892, 2452 |
| Hpy166II | GTNNAC | 7 cut(s) | 52, 238, 705, 1134, 1600, 1892, 2353 |
| Hpy8I | GTNNAC | 7 cut(s) | 52, 238, 705, 1134, 1600, 1892, 2353 |
| Hpy99I | CGWCG | 6 cut(s) | 47, 137, 173, 227, 2248, 2380 |
| HpyAV | CCTTC | 5 cut(s) | 139, 262, 972, 1804, 2839 |
| HpyCH4IV | ACGT | 8 cut(s) | 225, 1120, 1435, 1594, 1636, 1894, 2243, 2375 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 100, 180, 183, 1513, 2495 |
| HpySE526I | ACGT | 8 cut(s) | 225, 1120, 1435, 1594, 1636, 1894, 2243, 2375 |
| Hsp92I | GRCGYC | 1 cut(s) | 225 |
| HspAI | GCGC | 3 cut(s) | 181, 602, 1109 |
| KflI | GGGWCCC | 1 cut(s) | 141 |
| Kpn2I | TCCGGA | 1 cut(s) | 1639 |
| LguI | GCTCTTC | 1 cut(s) | 110 |
| LmnI | GCTCC | 4 cut(s) | 209, 448, 2272, 2789 |
| Lsp1109I | GCAGC | 6 cut(s) | 399, 783, 811, 1849, 2329, 2351 |
| LweI | GCATC | 7 cut(s) | 367, 1076, 1343, 1660, 1795, 1824, 2352 |
| MaeI | CTAG | 5 cut(s) | 1016, 1256, 2304, 2727, 2852 |
| MaeII | ACGT | 8 cut(s) | 225, 1120, 1435, 1594, 1636, 1894, 2243, 2375 |
| MaeIII | GTNAC | 7 cut(s) | 805, 1691, 1880, 1966, 2430, 2440, 2656 |
| MflI | RGATCY | 5 cut(s) | 811, 1820, 1923, 2645, 2848 |
| MhlI | GDGCHC | 9 cut(s) | 162, 512, 730, 1015, 2040, 2277, 2355, 2521, 2786 |
| MlsI | TGGCCA | 1 cut(s) | 1363 |
| MluNI | TGGCCA | 1 cut(s) | 1363 |
| MlyI | GAGTC | 4 cut(s) | 1129, 1556, 2188, 2316 |
| MmeI | TCCRAC | 9 cut(s) | 147, 192, 246, 426, 1580, 2226, 2396, 2786, 2910 |
| Mox20I | TGGCCA | 1 cut(s) | 1363 |
| Mph1103I | ATGCAT | 1 cut(s) | 1069 |
| MroI | TCCGGA | 1 cut(s) | 1639 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1032, 2115 |
| MscI | TGGCCA | 1 cut(s) | 1363 |
| MseI | TTAA | 9 cut(s) | 281, 438, 845, 1187, 1529, 1568, 1911, 1928, 2283 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1278 |
| Msp20I | TGGCCA | 1 cut(s) | 1363 |
| MspA1I | CMGCKG | 2 cut(s) | 1340, 2342 |
| MspI | CCGG | 5 cut(s) | 11, 201, 293, 767, 1640 |
| MspR9I | CCNGG | 6 cut(s) | 247, 294, 513, 768, 993, 2788 |
| Mva1269I | GAATGC | 1 cut(s) | 1397 |
| MvaI | CCWGG | 4 cut(s) | 247, 513, 993, 2788 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 100, 180, 183, 1513, 2495 |
| NciI | CCSGG | 2 cut(s) | 294, 768 |
| NlaIV | GGNNCC | 5 cut(s) | 142, 143, 205, 1460, 2737 |
| NmuCI | GTSAC | 5 cut(s) | 805, 1691, 1880, 1966, 2440 |
| NsiI | ATGCAT | 1 cut(s) | 1069 |
| NspI | RCATGY | 2 cut(s) | 1097, 2472 |
| NspV | TTCGAA | 1 cut(s) | 2265 |
| PaeI | GCATGC | 1 cut(s) | 2472 |
| PagI | TCATGA | 1 cut(s) | 1779 |
| PceI | AGGCCT | 1 cut(s) | 71 |
| PciSI | GCTCTTC | 1 cut(s) | 110 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 39, 231, 1591 |
| PctI | GAATGC | 1 cut(s) | 1397 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1032, 2115 |
| PfeI | GAWTC | 7 cut(s) | 661, 679, 895, 1028, 1103, 2230, 2667 |
| PflFI | GACNNNGTC | 1 cut(s) | 41 |
| PfoI | TCCNGGA | 1 cut(s) | 292 |
| Ple19I | CGATCG | 1 cut(s) | 2327 |
| PleI | GAGTC | 4 cut(s) | 1129, 1555, 2188, 2315 |
| PpsI | GAGTC | 4 cut(s) | 1129, 1555, 2188, 2315 |
| Ppu21I | YACGTR | 2 cut(s) | 1595, 1895 |
| PpuMI | RGGWCCY | 1 cut(s) | 141 |
| PsiI | TTATAA | 2 cut(s) | 1166, 2532 |
| Psp124BI | GAGCTC | 1 cut(s) | 2521 |
| Psp1406I | AACGTT | 1 cut(s) | 1435 |
| Psp5II | RGGWCCY | 1 cut(s) | 141 |
| Psp6I | CCWGG | 4 cut(s) | 245, 511, 991, 2786 |
| PspEI | GGTNACC | 1 cut(s) | 1691 |
| PspFI | CCCAGC | 1 cut(s) | 2041 |
| PspGI | CCWGG | 4 cut(s) | 245, 511, 991, 2786 |
| PspN4I | GGNNCC | 5 cut(s) | 142, 143, 205, 1460, 2737 |
| PspPI | GGNCC | 6 cut(s) | 141, 249, 995, 2009, 2289, 2735 |
| PspPPI | RGGWCCY | 1 cut(s) | 141 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1942, 1974 |
| PstNI | CAGNNNCTG | 3 cut(s) | 91, 976, 1802 |
| PsuI | RGATCY | 5 cut(s) | 811, 1820, 1923, 2645, 2848 |
| PsyI | GACNNNGTC | 1 cut(s) | 41 |
| PvuI | CGATCG | 1 cut(s) | 2327 |
| PvuII | CAGCTG | 2 cut(s) | 1340, 2342 |
| RsaI | GTAC | 8 cut(s) | 192, 402, 948, 1050, 1601, 1893, 2461, 2694 |
| RsaNI | GTAC | 8 cut(s) | 191, 401, 947, 1049, 1600, 1892, 2460, 2693 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1278 |
| SacI | GAGCTC | 1 cut(s) | 2521 |
| SapI | GCTCTTC | 1 cut(s) | 110 |
| SaqAI | TTAA | 9 cut(s) | 281, 438, 845, 1187, 1529, 1568, 1911, 1928, 2283 |
| Sau96I | GGNCC | 6 cut(s) | 141, 249, 995, 2009, 2289, 2735 |
| SchI | GAGTC | 4 cut(s) | 1129, 1556, 2188, 2316 |
| ScrFI | CCNGG | 6 cut(s) | 247, 294, 513, 768, 993, 2788 |
| SduI | GDGCHC | 9 cut(s) | 162, 512, 730, 1015, 2040, 2277, 2355, 2521, 2786 |
| SfaNI | GCATC | 7 cut(s) | 367, 1076, 1343, 1660, 1795, 1824, 2352 |
| SfcI | CTRYAG | 1 cut(s) | 1953 |
| SfuI | TTCGAA | 1 cut(s) | 2265 |
| SgrAI | CRCCGGYG | 1 cut(s) | 10 |
| SinI | GGWCC | 5 cut(s) | 141, 249, 2009, 2289, 2735 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1278 |
| SmlI | CTYRAG | 1 cut(s) | 1614 |
| SmoI | CTYRAG | 1 cut(s) | 1614 |
| SnaBI | TACGTA | 1 cut(s) | 1895 |
| SphI | GCATGC | 1 cut(s) | 2472 |
| SseBI | AGGCCT | 1 cut(s) | 71 |
| SspI | AATATT | 3 cut(s) | 1184, 2115, 2159 |
| SspMI | CTAG | 5 cut(s) | 1016, 1256, 2304, 2727, 2852 |
| SstI | GAGCTC | 1 cut(s) | 2521 |
| StuI | AGGCCT | 1 cut(s) | 71 |
| StyD4I | CCNGG | 6 cut(s) | 245, 292, 511, 766, 991, 2786 |
| StyI | CCWWGG | 2 cut(s) | 1934, 2971 |
| TaiI | ACGT | 8 cut(s) | 228, 1123, 1438, 1597, 1639, 1897, 2246, 2378 |
| TaqI | TCGA | 8 cut(s) | 45, 132, 156, 1486, 2218, 2265, 2378, 2943 |
| TaqII | GACCGA | 2 cut(s) | 2026, 2317 |
| TatI | WGTACW | 5 cut(s) | 946, 1048, 1599, 2459, 2692 |
| TauI | GCSGC | 4 cut(s) | 177, 186, 2721, 2893 |
| TfiI | GAWTC | 7 cut(s) | 661, 679, 895, 1028, 1103, 2230, 2667 |
| Tru1I | TTAA | 9 cut(s) | 281, 438, 845, 1187, 1529, 1568, 1911, 1928, 2283 |
| Tru9I | TTAA | 9 cut(s) | 281, 438, 845, 1187, 1529, 1568, 1911, 1928, 2283 |
| TscAI | CASTG | 5 cut(s) | 735, 933, 1508, 1975, 2232 |
| TseFI | GTSAC | 5 cut(s) | 805, 1691, 1880, 1966, 2440 |
| TseI | GCWGC | 6 cut(s) | 387, 771, 799, 1837, 2339, 2342 |
| Tsp45I | GTSAC | 5 cut(s) | 805, 1691, 1880, 1966, 2440 |
| TspGWI | ACGGA | 3 cut(s) | 824, 967, 2107 |
| TspRI | CASTG | 5 cut(s) | 735, 933, 1508, 1975, 2232 |
| Tth111I | GACNNNGTC | 1 cut(s) | 41 |
| VneI | GTGCAC | 1 cut(s) | 2351 |
| VpaK11BI | GGWCC | 5 cut(s) | 141, 249, 2009, 2289, 2735 |
| XapI | RAATTY | 7 cut(s) | 343, 841, 955, 1020, 1288, 2249, 2525 |
| XbaI | TCTAGA | 3 cut(s) | 1015, 2303, 2851 |
| XceI | RCATGY | 2 cut(s) | 1097, 2472 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1032, 2115 |
| XspI | CTAG | 5 cut(s) | 1016, 1256, 2304, 2727, 2852 |
| ZraI | GACGTC | 1 cut(s) | 226 |
| Zsp2I | ATGCAT | 1 cut(s) | 1069 |