Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009809

Physical Location & Seq

Genomic Coordinates Forward (+)

29549540 .. 29552438

Gene Structure 2899 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G78570.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGGCTTCGTACACTCCCAAGAACATTCTCATCACCGGAGCTGCTGGTTTCATTGCGTCTCATGTCGCCAACAGACTCATACGAAGCTATCCTGATTACAAAATCGTTGTGCTTGACAAGCTTGATTACTGTTCAAATCTCAAGAATCTCAATCCTTCTAAGCACTCTCCGAACTTCAAGTTTGTCAAAGGTGATATCGCTAGTGCTGACTTGGTGAATCATCTTCTCATCACTGAAGGTATTGACACCATCATGCATTTCGCTGCTCAGACTCACGTCGACAATTCCTTCGGTAACAGTTTCGAGTTTACTAAGAATAATATCTATGGAACTCATGTCCTTCTTGAGGCTTGTAAAGTTACTGGTCAGATTAGGAGGTTTATTCATGTTAGTACTGATGAAGTTTATGGTGAAACTGATGAGGATGCTCTTGTTGGTAACCATGAGGCTTCTCAGCTGCTTCCGACGAATCCTTACTCTGCCACGAAAGCTGGTGCTGAGATGCTTGTTATGGCTTATGGTAGATCTTATGGTTTGCCTGTTATTACCACTCGTGGGAATAACGTCTATGGACCGAATCAGTTTCCTGAGAAGTTGATTCCTAAGTTCATTTTGCTGGCAATGAGAGGGCAGGTTCTTCCCATTCATGGAGATGGATCAAATGTCAGGAGCTACCTCTACTGTGAAGACGTTGCTGAGGCTTTTGAAGTTGTTCTTCACAAGGGAGAAGTTGGCCATGTTTACAATATTGGGACGAAGAAGGAGAGGAGAGTGAATGATGTTGCCAAAGACATCTGCAAACTCTTCAACATGGACCCTGAGGCGAACATCAAGTTTGTCGACAACAGACCTTTTAACGATCAGAGGTACTTCCTTGACGATCAGAAGCTCAAAAAGTTGGGATGGTCAGAGAGAACCACGTGGGAAGAAGGGTTGAAGAAAACTATGGATTGGTACACACAGAACCCGGAGTGGTGGGGTGATGTTTCTGGAGCATTGCTTCCTCATCCAAGGATGCTGATGATGCCTGGTGGGCGACACTTTGATGGCTCCGAGGACAATTCGCTGGCAGCTACTTTATCTGAAAAACCAAGTCAAACCCATATGGTTGTTCCAAGCCAAAGGAGCAACGGCACACCTCAAAAGCCTTCGCTGAAGTTCCTGATATATGGAAAGACCGGATGGATCGGTGGTCTGCTTGGAAAGATATGTGATAAGCAAGGAATTGCTTACGAGTATGGGAAAGGTCGGTTGGAGGATCGATCTTCTCTTCTGCAGGATATTCAGAGTGTTAAGCCAACCCATGTTTTCAATTCCGCTGGTGTGACTGGGAGACCCAATGTTGACTGGTGTGAGTCTCACAAGACCGAGACTATCCGTGCCAATGTAGCTGGCACATTGACTCTAGCTGATGTCTGCAGAGAGCACGGACTCCTAATGATGAATTTCGCTACTGGTTGTATATTCGAATATGACGACAAGCATCCGGAAGGTTCAGGAATTGGCTTCAAGGAGGAAGACACACCCAACTTCACTGGCTCTTTCTACTCGAAAACCAAAGCCATGGTCGAGGAGCTGCTAAAGGAGTATGACAACGTATGCACATTGAGGGTAAGGATGCCGATCTCCTCGGATCTAAACAACCCGCGCAACTTCATCACCAAGATCTCCAGGTACAACAAAGTAGTGAACATCCCAAACAGCATGACTGTGTTGGACGAGTTATTACCAATCTCCATCGAGATGGCGAAAAGAAACTTGAAAGGAATCTGGAACTTCACAAACCCAGGTGTGGTGAGCCACAACGAGATCCTAGAGATGTACAGAGACTACATCAACCCTGAATTCAAATGGGCAAACTTCACATTAGAGGAGCAAGCTAAAGTCATTGTGGCTCCAAGAAGCAACAACGAGATGGATGCTTCCAAGCTCAAGAAAGAGTTCCCTGAGCTACTCTCTATCAAGGAGTCTCTGATTAAGTATGCATACGGGCCAAACAAGAAAACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005911 GO:0006139 GO:0006725 GO:0006793 GO:0006807 GO:0006810 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009225 GO:0009226 GO:0009506 GO:0009791 GO:0009812 GO:0009813 GO:0009914 GO:0009966 GO:0009987 GO:0010154 GO:0010191 GO:0010192 GO:0010214 GO:0010253 GO:0010280 GO:0010315 GO:0010489 GO:0010490 GO:0010646 GO:0010817 GO:0010928 GO:0016491 GO:0016614 GO:0016616 GO:0016829 GO:0016835 GO:0016836 GO:0016853 GO:0016854 GO:0016857 GO:0018130 GO:0019438 GO:0022414 GO:0023051 GO:0030054 GO:0030154 GO:0032501 GO:0032502 GO:0033478 GO:0034641 GO:0034654 GO:0042127 GO:0042440 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046148 GO:0046483 GO:0048316 GO:0048583 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050377 GO:0050789 GO:0050794 GO:0051179 GO:0051234 GO:0051552 GO:0051553 GO:0051554 GO:0051555 GO:0055044 GO:0055086 GO:0055114 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00520 map00520

Pfam Domains

Protein Families

Epimerase GDP_Man_Dehyd

Protein Analysis

669

Amino Acids

75.37

Weight (kDa)

6.84

Isoelectric Point (pI)

30.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RmlD_sub_bind	PF04321	8 - 318	1.3e-15	RmlD substrate binding domain
Epimerase	PF01370	9 - 251	9.6e-56	NAD dependent epimerase/dehydratase family
Polysacc_synt_2	PF02719	9 - 283	5.3e-20	Polysaccharide biosynthesis protein
GDP_Man_Dehyd	PF16363	10 - 315	1.5e-66	GDP-mannose 4,6 dehydratase
3Beta_HSD	PF01073	10 - 235	3.9e-24	3-beta hydroxysteroid dehydrogenase/isomerase family
NAD_binding_4	PF07993	11 - 193	5.7e-18	Male sterility protein
RmlD_sub_bind	PF04321	386 - 556	4.4e-13	RmlD substrate binding domain
GDP_Man_Dehyd	PF16363	411 - 555	1e-05	GDP-mannose 4,6 dehydratase
Epimerase	PF01370	415 - 541	1.6e-12	NAD dependent epimerase/dehydratase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0009809)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78570
fragaria_vesca	FvH4_3g17640 FvH4_3g17640 FvH4_3g17640
malus_domestica	MD03G1250400.v1.1 MD11G1270500.v1.1
prunus_persica	Prupe.4G155800_v2.0.a1 Prupe.4G155800_v2.0.a1 Prupe.4G155800_v2.0.a1
pyrus_communis	pycom11g23940
rosa_chinensis	RchiOBHm_Chr5g0029371
rosa_laevigata	RLG00000033159
rosa_multiflora	Rmu_sc0004373.1_g000022
rosa_roxburghii	Rroxscaffold_1G00050590
rosa_rugosa	Rorug05G0113800 Rorug05G0113900
rosa_samantha	Rh5AG205700 Rh5BG204100 Rh5CG226000 Rh5DG207700
rosa_wichuraiana	Rw5G018720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	622
AccI	GTMKAC	2 cut(s)	279, 840
AccII	CGCG	1 cut(s)	1648
AccIII	TCCGGA	1 cut(s)	1486
AciI	CCGC	2 cut(s)	1317, 1646
AclWI	GGATC	5 cut(s)	664, 1193, 1266, 1641, 1804
AcoI	YGGCCR	1 cut(s)	733
AcsI	RAATTY	2 cut(s)	1444, 1844
AcuI	CTGAAG	2 cut(s)	255, 1175
AcvI	CACGTG	1 cut(s)	921
AfaI	GTAC	6 cut(s)	11, 394, 869, 956, 1676, 1823
AfiI	CCNNNNNNNGG	4 cut(s)	346, 555, 647, 1792
AgsI	TTSAA	9 cut(s)	135, 178, 707, 808, 937, 1312, 1510, 1762, 1849
AjiI	CACGTC	1 cut(s)	277
AjnI	CCWGG	3 cut(s)	1027, 1670, 1786
AjuI	GAANNNNNNNTTGG	2 cut(s)	1235, 1267
Alw21I	GWGCWC	1 cut(s)	1428
Alw26I	GTCTC	6 cut(s)	63, 1327, 1362, 1364, 1821, 1974
AlwI	GGATC	5 cut(s)	664, 1193, 1266, 1641, 1804
Aor13HI	TCCGGA	1 cut(s)	1486
AoxI	GGCC	2 cut(s)	733, 1991
ApeKI	GCWGC	5 cut(s)	41, 263, 457, 1070, 1576
ApoI	RAATTY	2 cut(s)	1444, 1844
ArsI	GACNNNNNNTTYG	4 cut(s)	272, 304, 1551, 1583
Asp700I	GAANNNNTTC	2 cut(s)	711, 1940
AspLEI	GCGC	1 cut(s)	1650
AspS9I	GGNCC	3 cut(s)	572, 814, 1991
AsuC2I	CCSGG	1 cut(s)	968
AsuHPI	GGTGA	7 cut(s)	25, 203, 226, 422, 992, 1651, 1807
AsuII	TTCGAA	1 cut(s)	1467
AvaII	GGWCC	2 cut(s)	572, 814
AxyI	CCTNAGG	1 cut(s)	819
BalI	TGGCCA	1 cut(s)	735
BauI	CACGAG	1 cut(s)	552
BbrPI	CACGTG	1 cut(s)	921
BbsI	GAAGAC	2 cut(s)	693, 1524
Bbv12I	GWGCWC	1 cut(s)	1428
BbvCI	CCTCAGC	1 cut(s)	696
BbvI	GCAGC	5 cut(s)	28, 250, 444, 1082, 1563
BccI	CCATC	8 cut(s)	257, 647, 897, 1040, 1176, 1738, 1745, 1909
BceAI	ACGGC	1 cut(s)	1147
BcgI	CGANNNNNNTGC	2 cut(s)	1901, 1935
BciT130I	CCWGG	3 cut(s)	1029, 1672, 1788
BcnI	CCSGG	1 cut(s)	968
BcoDI	GTCTC	6 cut(s)	63, 1327, 1362, 1364, 1821, 1974
BfaI	CTAG	3 cut(s)	201, 1406, 1814
BfmI	CTRYAG	2 cut(s)	1274, 1417
BfuAI	ACCTGC	1 cut(s)	622
BglI	GCCNNNNNGGC	1 cut(s)	1033
BglII	AGATCT	2 cut(s)	524, 1665
BisI	GCNGC	5 cut(s)	42, 264, 458, 1071, 1577
BlsI	GCNGC	5 cut(s)	43, 265, 459, 1072, 1578
BmcAI	AGTACT	1 cut(s)	394
Bme1390I	CCNGG	4 cut(s)	968, 1029, 1672, 1788
Bme18I	GGWCC	2 cut(s)	572, 814
BmgBI	CACGTC	1 cut(s)	277
BmgT120I	GGNCC	3 cut(s)	572, 814, 1991
BmiI	GGNNCC	3 cut(s)	816, 1051, 1896
BmrFI	CCNGG	4 cut(s)	968, 1029, 1672, 1788
BmrI	ACTGGG	1 cut(s)	1338
BmsI	GCATC	7 cut(s)	415, 492, 1005, 1014, 1492, 1608, 1909
BmuI	ACTGGG	1 cut(s)	1338
BoxI	GACNNNNGTC	1 cut(s)	275
BpiI	GAAGAC	2 cut(s)	693, 1524
BplI	GAGNNNNNCTC	2 cut(s)	1940, 1972
BpmI	CTGGAG	2 cut(s)	1011, 1654
Bpu10I	CCTNAGC	2 cut(s)	696, 1947
Bpu14I	TTCGAA	1 cut(s)	1467
BpuEI	CTTGAG	3 cut(s)	125, 365, 1916
BpuMI	CCSGG	1 cut(s)	968
Bsa29I	ATCGAT	1 cut(s)	1261
BsaAI	YACGTR	1 cut(s)	921
BsaBI	GATNNNNATC	1 cut(s)	1622
BsaI	GGTCTC	1 cut(s)	1327
BsaJI	CCNNGG	5 cut(s)	1010, 1053, 1563, 1629, 1786
BsaWI	WCCGGW	3 cut(s)	35, 1178, 1486
Bsc4I	CCNNNNNNNGG	4 cut(s)	346, 555, 647, 1792
Bse1I	ACTGG	5 cut(s)	367, 1333, 1352, 1459, 1540
Bse21I	CCTNAGG	1 cut(s)	819
Bse3DI	GCAATG	3 cut(s)	51, 627, 995
Bse8I	GATNNNNATC	1 cut(s)	1622
BseAI	TCCGGA	1 cut(s)	1486
BseBI	CCWGG	3 cut(s)	1029, 1672, 1788
BseCI	ATCGAT	1 cut(s)	1261
BseDI	CCNNGG	5 cut(s)	1010, 1053, 1563, 1629, 1786
BseGI	GGATG	9 cut(s)	430, 908, 1006, 1020, 1187, 1483, 1623, 1692, 1924
BseJI	GATNNNNATC	1 cut(s)	1622
BseLI	CCNNNNNNNGG	4 cut(s)	346, 555, 647, 1792
BseMI	GCAATG	3 cut(s)	51, 627, 995
BseMII	CTCAG	7 cut(s)	281, 467, 489, 579, 687, 810, 1938
BseNI	ACTGG	5 cut(s)	367, 1333, 1352, 1459, 1540
BseRI	GAGGAG	4 cut(s)	781, 1586, 1618, 1886
BseXI	GCAGC	5 cut(s)	28, 250, 444, 1082, 1563
Bsh1236I	CGCG	1 cut(s)	1648
BshFI	GGCC	2 cut(s)	735, 1993
BshVI	ATCGAT	1 cut(s)	1261
BsiHKAI	GWGCWC	1 cut(s)	1428
BsiSI	CCGG	4 cut(s)	36, 968, 1179, 1487
BslFI	GGGAC	1 cut(s)	766
BslI	CCNNNNNNNGG	4 cut(s)	346, 555, 647, 1792
BsmAI	GTCTC	6 cut(s)	63, 1327, 1362, 1364, 1821, 1974
BsmBI	CGTCTC	1 cut(s)	63
BsmFI	GGGAC	1 cut(s)	766
BsnI	GGCC	2 cut(s)	735, 1993
Bso31I	GGTCTC	1 cut(s)	1327
Bsp119I	TTCGAA	1 cut(s)	1467
Bsp1286I	GDGCHC	1 cut(s)	1428
Bsp13I	TCCGGA	1 cut(s)	1486
Bsp1407I	TGTACA	1 cut(s)	1821
Bsp19I	CCATGG	1 cut(s)	1563
BspACI	CCGC	2 cut(s)	1317, 1646
BspANI	GGCC	2 cut(s)	735, 1993
BspCNI	CTCAG	7 cut(s)	280, 466, 490, 580, 688, 811, 1939
BspDI	ATCGAT	1 cut(s)	1261
BspEI	TCCGGA	1 cut(s)	1486
BspFNI	CGCG	1 cut(s)	1648
BspLI	GGNNCC	3 cut(s)	816, 1051, 1896
BspMAI	CTGCAG	2 cut(s)	1278, 1421
BspMI	ACCTGC	1 cut(s)	622
BspPI	GGATC	5 cut(s)	664, 1193, 1266, 1641, 1804
BspT104I	TTCGAA	1 cut(s)	1467
BspTNI	GGTCTC	1 cut(s)	1327
BsrDI	GCAATG	3 cut(s)	51, 627, 995
BsrGI	TGTACA	1 cut(s)	1821
BsrI	ACTGG	5 cut(s)	367, 1333, 1352, 1459, 1540
BssECI	CCNNGG	5 cut(s)	1010, 1053, 1563, 1629, 1786
BssSI	CACGAG	1 cut(s)	552
BssT1I	CCWWGG	2 cut(s)	1010, 1563
Bst2BI	CACGAG	1 cut(s)	552
Bst2UI	CCWGG	3 cut(s)	1029, 1672, 1788
Bst4CI	ACNGT	4 cut(s)	131, 299, 683, 1711
Bst6I	CTCTTC	2 cut(s)	809, 1275
BstAUI	TGTACA	1 cut(s)	1821
BstBAI	YACGTR	1 cut(s)	921
BstBI	TTCGAA	1 cut(s)	1467
BstC8I	GCNNGC	4 cut(s)	618, 1068, 1393, 1878
BstDSI	CCRYGG	1 cut(s)	1563
BstEII	GGTNACC	1 cut(s)	437
BstENI	CCTNNNNNAGG	1 cut(s)	344
BstF5I	GGATG	9 cut(s)	430, 908, 1006, 1020, 1187, 1483, 1623, 1692, 1924
BstFNI	CGCG	1 cut(s)	1648
BstHHI	GCGC	1 cut(s)	1650
BstMAI	GTCTC	6 cut(s)	63, 1327, 1362, 1364, 1821, 1974
BstMWI	GCNNNNNNNGC	6 cut(s)	118, 488, 1024, 1033, 1125, 1388
BstNI	CCWGG	3 cut(s)	1029, 1672, 1788
BstPAI	GACNNNNGTC	1 cut(s)	275
BstPI	GGTNACC	1 cut(s)	437
BstSCI	CCNGG	4 cut(s)	966, 1027, 1670, 1786
BstSFI	CTRYAG	2 cut(s)	1274, 1417
BstUI	CGCG	1 cut(s)	1648
BstV1I	GCAGC	5 cut(s)	28, 250, 444, 1082, 1563
BstV2I	GAAGAC	2 cut(s)	693, 1524
BstX2I	RGATCY	4 cut(s)	524, 1633, 1665, 1809
BstXI	CCANNNNNNTGG	2 cut(s)	1564, 1744
BstYI	RGATCY	4 cut(s)	524, 1633, 1665, 1809
Bsu15I	ATCGAT	1 cut(s)	1261
Bsu36I	CCTNAGG	1 cut(s)	819
BsuRI	GGCC	2 cut(s)	735, 1993
BsuTUI	ATCGAT	1 cut(s)	1261
BtgI	CCRYGG	1 cut(s)	1563
BtrI	CACGTC	1 cut(s)	277
BtsCI	GGATG	9 cut(s)	430, 908, 1006, 1020, 1187, 1483, 1623, 1692, 1924
BtsIMutI	CAGTG	2 cut(s)	231, 1533
BveI	ACCTGC	1 cut(s)	622
Cac8I	GCNNGC	4 cut(s)	618, 1068, 1393, 1878
CfoI	GCGC	1 cut(s)	1650
Cfr13I	GGNCC	3 cut(s)	572, 814, 1991
ClaI	ATCGAT	1 cut(s)	1261
CseI	GACGC	1 cut(s)	45
Csp6I	GTAC	6 cut(s)	10, 393, 868, 955, 1675, 1822
CviQI	GTAC	6 cut(s)	10, 393, 868, 955, 1675, 1822
EaeI	YGGCCR	1 cut(s)	733
Eam1104I	CTCTTC	2 cut(s)	809, 1275
EarI	CTCTTC	2 cut(s)	809, 1275
Eco130I	CCWWGG	2 cut(s)	1010, 1563
Eco31I	GGTCTC	1 cut(s)	1327
Eco32I	GATATC	1 cut(s)	196
Eco47I	GGWCC	2 cut(s)	572, 814
Eco57I	CTGAAG	2 cut(s)	255, 1175
Eco72I	CACGTG	1 cut(s)	921
Eco81I	CCTNAGG	1 cut(s)	819
Eco91I	GGTNACC	1 cut(s)	437
EcoNI	CCTNNNNNAGG	1 cut(s)	344
EcoO65I	GGTNACC	1 cut(s)	437
EcoRI	GAATTC	1 cut(s)	1844
EcoRII	CCWGG	3 cut(s)	1027, 1670, 1786
EcoRV	GATATC	1 cut(s)	196
EcoT14I	CCWWGG	2 cut(s)	1010, 1563
EcoT22I	ATGCAT	2 cut(s)	258, 1987
ErhI	CCWWGG	2 cut(s)	1010, 1563
Esp3I	CGTCTC	1 cut(s)	63
FalI	AAGNNNNNCTT	2 cut(s)	699, 731
FaqI	GGGAC	1 cut(s)	766
FauI	CCCGC	1 cut(s)	1653
FauNDI	CATATG	1 cut(s)	1104
FblI	GTMKAC	2 cut(s)	279, 840
Fnu4HI	GCNGC	5 cut(s)	42, 264, 458, 1071, 1577
FokI	GGATG	9 cut(s)	437, 915, 993, 1027, 1194, 1470, 1630, 1679, 1931
Fsp4HI	GCNGC	5 cut(s)	42, 264, 458, 1071, 1577
FspBI	CTAG	3 cut(s)	201, 1406, 1814
GlaI	GCGC	1 cut(s)	1649
GluI	GCNGC	5 cut(s)	42, 264, 458, 1071, 1577
GsuI	CTGGAG	2 cut(s)	1011, 1654
HaeIII	GGCC	2 cut(s)	735, 1993
HapII	CCGG	4 cut(s)	36, 968, 1179, 1487
HgaI	GACGC	1 cut(s)	45
HhaI	GCGC	1 cut(s)	1650
Hin6I	GCGC	1 cut(s)	1648
HinP1I	GCGC	1 cut(s)	1648
HincII	GTYRAC	3 cut(s)	280, 841, 1345
HindII	GTYRAC	3 cut(s)	280, 841, 1345
HindIII	AAGCTT	1 cut(s)	119
HpaII	CCGG	4 cut(s)	36, 968, 1179, 1487
HphI	GGTGA	7 cut(s)	25, 203, 226, 422, 992, 1651, 1807
Hpy166II	GTNNAC	8 cut(s)	12, 280, 309, 742, 841, 957, 1345, 1690
Hpy8I	GTNNAC	8 cut(s)	12, 280, 309, 742, 841, 957, 1345, 1690
Hpy99I	CGWCG	2 cut(s)	281, 469
HpyAV	CCTTC	8 cut(s)	165, 230, 298, 350, 754, 923, 1158, 1484
HpyCH4III	ACNGT	4 cut(s)	131, 299, 683, 1711
HpyCH4IV	ACGT	5 cut(s)	276, 564, 690, 920, 1596
HpyCH4V	TGCA	6 cut(s)	256, 798, 1276, 1419, 1602, 1985
HpyF10VI	GCNNNNNNNGC	6 cut(s)	118, 488, 1024, 1033, 1125, 1388
HpySE526I	ACGT	5 cut(s)	276, 564, 690, 920, 1596
HspAI	GCGC	1 cut(s)	1648
Kpn2I	TCCGGA	1 cut(s)	1486
LmnI	GCTCC	8 cut(s)	38, 669, 992, 1055, 1125, 1573, 1873, 1900
Lsp1109I	GCAGC	5 cut(s)	28, 250, 444, 1082, 1563
LweI	GCATC	7 cut(s)	415, 492, 1005, 1014, 1492, 1608, 1909
MaeI	CTAG	3 cut(s)	201, 1406, 1814
MaeII	ACGT	5 cut(s)	276, 564, 690, 920, 1596
MaeIII	GTNAC	4 cut(s)	293, 358, 437, 1324
MflI	RGATCY	4 cut(s)	524, 1633, 1665, 1809
MhlI	GDGCHC	1 cut(s)	1428
MlsI	TGGCCA	1 cut(s)	735
MluCI	AATT	7 cut(s)	283, 1060, 1224, 1312, 1444, 1500, 1844
MluNI	TGGCCA	1 cut(s)	735
MlyI	GAGTC	6 cut(s)	69, 265, 1364, 1396, 1425, 1976
MmeI	TCCRAC	3 cut(s)	488, 1233, 1695
Mox20I	TGGCCA	1 cut(s)	735
Mph1103I	ATGCAT	2 cut(s)	258, 1987
MroI	TCCGGA	1 cut(s)	1486
MroXI	GAANNNNTTC	2 cut(s)	711, 1940
MscI	TGGCCA	1 cut(s)	735
MseI	TTAA	3 cut(s)	855, 1293, 1977
MslI	CAYNNNNRTG	5 cut(s)	251, 651, 1044, 1709, 1742
Msp20I	TGGCCA	1 cut(s)	735
MspA1I	CMGCKG	2 cut(s)	457, 1319
MspI	CCGG	4 cut(s)	36, 968, 1179, 1487
MspR9I	CCNGG	4 cut(s)	968, 1029, 1672, 1788
MvaI	CCWGG	3 cut(s)	1029, 1672, 1788
MvnI	CGCG	1 cut(s)	1648
MwoI	GCNNNNNNNGC	6 cut(s)	118, 488, 1024, 1033, 1125, 1388
NciI	CCSGG	1 cut(s)	968
NcoI	CCATGG	1 cut(s)	1563
NdeI	CATATG	1 cut(s)	1104
NlaIV	GGNNCC	3 cut(s)	816, 1051, 1896
NmuCI	GTSAC	1 cut(s)	1324
NsiI	ATGCAT	2 cut(s)	258, 1987
NspV	TTCGAA	1 cut(s)	1467
PcsI	WCGNNNNNNNCGW	1 cut(s)	1473
PdmI	GAANNNNTTC	2 cut(s)	711, 1940
PfeI	GAWTC	6 cut(s)	145, 217, 469, 577, 598, 1767
PkrI	GCNGC	5 cut(s)	43, 265, 459, 1072, 1578
PleI	GAGTC	6 cut(s)	69, 265, 1363, 1396, 1425, 1975
PmaCI	CACGTG	1 cut(s)	921
PmlI	CACGTG	1 cut(s)	921
PpsI	GAGTC	6 cut(s)	69, 265, 1363, 1396, 1425, 1975
Ppu21I	YACGTR	1 cut(s)	921
PshAI	GACNNNNGTC	1 cut(s)	275
Psp6I	CCWGG	3 cut(s)	1027, 1670, 1786
PspCI	CACGTG	1 cut(s)	921
PspEI	GGTNACC	1 cut(s)	437
PspGI	CCWGG	3 cut(s)	1027, 1670, 1786
PspN4I	GGNNCC	3 cut(s)	816, 1051, 1896
PspPI	GGNCC	3 cut(s)	572, 814, 1991
PstI	CTGCAG	2 cut(s)	1278, 1421
PsuI	RGATCY	4 cut(s)	524, 1633, 1665, 1809
PvuII	CAGCTG	1 cut(s)	457
RsaI	GTAC	6 cut(s)	11, 394, 869, 956, 1676, 1823
RsaNI	GTAC	6 cut(s)	10, 393, 868, 955, 1675, 1822
RseI	CAYNNNNRTG	5 cut(s)	251, 651, 1044, 1709, 1742
SalI	GTCGAC	2 cut(s)	278, 839
SaqAI	TTAA	3 cut(s)	855, 1293, 1977
SatI	GCNGC	5 cut(s)	42, 264, 458, 1071, 1577
Sau96I	GGNCC	3 cut(s)	572, 814, 1991
ScaI	AGTACT	1 cut(s)	394
SchI	GAGTC	6 cut(s)	69, 265, 1364, 1396, 1425, 1976
ScrFI	CCNGG	4 cut(s)	968, 1029, 1672, 1788
SduI	GDGCHC	1 cut(s)	1428
SfaNI	GCATC	7 cut(s)	415, 492, 1005, 1014, 1492, 1608, 1909
SfcI	CTRYAG	2 cut(s)	1274, 1417
SfuI	TTCGAA	1 cut(s)	1467
SinI	GGWCC	2 cut(s)	572, 814
SmiMI	CAYNNNNRTG	5 cut(s)	251, 651, 1044, 1709, 1742
SmlI	CTYRAG	3 cut(s)	140, 344, 1931
SmoI	CTYRAG	3 cut(s)	140, 344, 1931
Sse9I	AATT	7 cut(s)	283, 1060, 1224, 1312, 1444, 1500, 1844
SsiI	CCGC	2 cut(s)	1317, 1646
SspI	AATATT	1 cut(s)	748
SspMI	CTAG	3 cut(s)	201, 1406, 1814
StyD4I	CCNGG	4 cut(s)	966, 1027, 1670, 1786
StyI	CCWWGG	2 cut(s)	1010, 1563
TaaI	ACNGT	4 cut(s)	131, 299, 683, 1711
TaiI	ACGT	5 cut(s)	279, 567, 693, 923, 1599
TaqI	TCGA	8 cut(s)	279, 303, 840, 1261, 1467, 1550, 1569, 1740
TaqII	GACCGA	2 cut(s)	589, 1382
TasI	AATT	7 cut(s)	283, 1060, 1224, 1312, 1444, 1500, 1844
TatI	WGTACW	2 cut(s)	392, 1821
TfiI	GAWTC	6 cut(s)	145, 217, 469, 577, 598, 1767
Tru1I	TTAA	3 cut(s)	855, 1293, 1977
Tru9I	TTAA	3 cut(s)	855, 1293, 1977
TscAI	CASTG	2 cut(s)	238, 1540
TseFI	GTSAC	1 cut(s)	1324
TseI	GCWGC	5 cut(s)	41, 263, 457, 1070, 1576
Tsp45I	GTSAC	1 cut(s)	1324
TspDTI	ATGAA	7 cut(s)	40, 374, 414, 598, 635, 1457, 1645
TspGWI	ACGGA	2 cut(s)	1367, 1443
TspRI	CASTG	2 cut(s)	238, 1540
VpaK11BI	GGWCC	2 cut(s)	572, 814
XagI	CCTNNNNNAGG	1 cut(s)	344
XapI	RAATTY	2 cut(s)	1444, 1844
XmiI	GTMKAC	2 cut(s)	279, 840
XmnI	GAANNNNTTC	2 cut(s)	711, 1940
XspI	CTAG	3 cut(s)	201, 1406, 1814
ZrmI	AGTACT	1 cut(s)	394
Zsp2I	ATGCAT	2 cut(s)	258, 1987

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.