Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0009809

Physical Location & Seq

Genomic Coordinates Reverse (-)

26910453 .. 26912548

Gene Structure 2096 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g23940.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2007 bp

ATGGGTTCATATACCCCCAAGAACATCCTCATAACTGGGGCTGCTGGCTTCATCGCATCTCATGTTGCCAACCGGCTCATCCGCAGTTACCCTGGCTACAAGATTGTTGTGCTTGACAAGCTTGACTATTGTTCAAATCTGAAAAACCTCCTTCCCTCCAAATCATCACCCAATTTCAAGTTTGTTAAGGGGGACATTGCCAGTGCTGACCTTGTCAACTATCTCCTCATCACTGAGTCAATCGATACCATAATGCATTTCGCTGCCCAGACCCATGTCGACAACTCCTTTGGTAACAGCCTTGAGTTCACCAAGAACAACATCTATGGCACCCATGTTCTCCTAGAAGCATGCAAAGTTACTGGACAAATCAAGAGGTTCATCCATGTCAGCACAGATGAGGTCTATGGTGAGACTGATGAAGATGCTGTTGTGGGAAACCACGAAGCATCTCAACTTCTCCCAACAAATCCATACTCCGCAACAAAAGCGGGAGCGGAAATGCTTGTTATGACATATGGCAGATCATATGGATTGCCTGTTATAACTACCCGTGGAAACAATGTCTATGGACCAAATCAATTTCCTGAAAAATTGATTCCGAAGTTCATTCTGTTGGCCATGCAAGGGAAGCCTCTGCCCATTCACGGGGATGGTTCTAACGTGAGAAGCTATCTATATTGTGAGGATGTTGCTGAGGCTTTTGAGCTCATTCTTCACAAAGGAGAGATTGGACATGTGTACAATATTGGAACAAAGAGGGAAAGGAGAGTTATTGATGTGGCCAAAGATATATGCAGACTTTTCTCAATTGACCCGGAGACAAACATCAAGTTTGTTGAAAACAGACCTTTCAATGATCAGAGGTATTTCCTAGATGATGAGAAGCTGAAGATTTTGGGGTGGTCAGAGCGCACCCAGTGGCAAGATGGGTTGAAGAAGACTATAGAATGGTACACTCAGAATCCTGATTGGTGGGGTGATGTATCTGGGGCTCTGCTACCTCATCCTCGAATGCTGATGATGCCTGGTGGGATTGAGAGACTTTCGGAAGATTCTGAAGAGGGCAAATCTGAATCTTTTGTCTCAAGTAATCCCCGAATGTTGGTTCGACCTTCCAAAGCCAGTGGCTCTCCTCGTAAACCTCCCTATAAGTTCTTGATCTATGGTAGGACTGGTTGGATTGGGGGTGTACTTGGGAAGCTATGTGAAAAACAAGGGATTCCTTATGAATATGGAAAAGGGCGTCTAGAGGATCGATCATCAATCTTGGCAGATATTCAGAATGTCAAGCCAACCCATGTGTTCAATGCTGCTGGTCTGACTGGTAGACCTAATGTTGATTGGTGTGAATCTCATAAAGCAGAAACAATTCGAGTCAATGTTGCTGGAACCTTGACCTTGGCAGATGTTTGCAGAGAGCATGGACTCCTGATGATGAACTATGCTACTGGGTGTATATTTGAATATGATGCTAAACATCCAGAAGGTTCGGGAATTGGGTTCAAGGAAGAGGACACACCCAATTTCCATGGTTCTTACTACTCAAAAACCAAGGCCATGGTTGAGGAGCTCTTGAAAGAATTCGACAATGTCTGCACTCTCAGAGTTCGGATGCCCATCTCATCTGACCTGAACAACCCTCGCAACTTCATTACCAAGATCTCTCGTTATAACAAAGTGGTAAACATTCCTAACAGCATGACCATCTTGGATGAGTTAATACCCATTTCTATTGAGATGGCAAAACGGAACTTGAGGGGCATATGGAACTTCACAAACCCTGGTGTCGTAAGCCATAATGAGATCCTGGAGATGTACAAGCAATACATTGACCCAAAGTTCACATGGGCTAACTTCACACTCGAAGAGCAAGCCAAGGTTATAGTTGCAGCTCGAAGCAACAATGAAATGGATGCATCCAAGTTGAAGAAAGAGTTCCCGGAGTTGCTGCCAATCAAGGAGTCGCTGATCAAGTATGTCTTTGAACCAAACAAGAAGGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005911 GO:0006139 GO:0006725 GO:0006793 GO:0006807 GO:0006810 GO:0008150 GO:0008152 GO:0009058 GO:0009225 GO:0009226 GO:0009506 GO:0009812 GO:0009813 GO:0009914 GO:0009966 GO:0009987 GO:0010253 GO:0010280 GO:0010315 GO:0010646 GO:0010817 GO:0010928 GO:0016829 GO:0016835 GO:0016836 GO:0018130 GO:0019438 GO:0023051 GO:0030054 GO:0030154 GO:0032502 GO:0033478 GO:0034641 GO:0034654 GO:0042127 GO:0042440 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046148 GO:0046483 GO:0048583 GO:0048869 GO:0050377 GO:0050789 GO:0050794 GO:0051179 GO:0051234 GO:0051552 GO:0051553 GO:0051554 GO:0051555 GO:0055044 GO:0055086 GO:0060918 GO:0065007 GO:0065008 GO:0071704 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00520 map00520

Pfam Domains

Protein Families

Epimerase GDP_Man_Dehyd

Protein Analysis

669

Amino Acids

75.4

Weight (kDa)

7.24

Isoelectric Point (pI)

32.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RmlD_sub_bind	PF04321	8 - 318	1.2e-14	RmlD substrate binding domain
Epimerase	PF01370	9 - 251	4.8e-56	NAD dependent epimerase/dehydratase family
Polysacc_synt_2	PF02719	9 - 283	2.4e-20	Polysaccharide biosynthesis protein
GDP_Man_Dehyd	PF16363	10 - 315	1e-65	GDP-mannose 4,6 dehydratase
3Beta_HSD	PF01073	10 - 235	6.1e-23	3-beta hydroxysteroid dehydrogenase/isomerase family
NAD_binding_4	PF07993	11 - 191	1.4e-18	Male sterility protein
RmlD_sub_bind	PF04321	385 - 555	4.1e-14	RmlD substrate binding domain
Epimerase	PF01370	389 - 538	1.6e-11	NAD dependent epimerase/dehydratase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0009809)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78570
fragaria_vesca	FvH4_3g17640 FvH4_3g17640 FvH4_3g17640
malus_domestica	MD03G1250400.v1.1 MD11G1270500.v1.1
prunus_persica	Prupe.4G155800_v2.0.a1 Prupe.4G155800_v2.0.a1 Prupe.4G155800_v2.0.a1
pyrus_communis	pycom11g23940
rosa_chinensis	RchiOBHm_Chr5g0029371
rosa_laevigata	RLG00000033159
rosa_multiflora	Rmu_sc0004373.1_g000022
rosa_roxburghii	Rroxscaffold_1G00050590
rosa_rugosa	Rorug05G0113800 Rorug05G0113900
rosa_samantha	Rh5AG205700 Rh5BG204100 Rh5CG226000 Rh5DG207700
rosa_wichuraiana	Rw5G018720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	545, 1674
AccB1I	GGYRCC	1 cut(s)	329
AccBSI	CCGCTC	1 cut(s)	497
AccI	GTMKAC	2 cut(s)	279, 1330
AciI	CCGC	4 cut(s)	82, 480, 491, 497
AclWI	GGATC	2 cut(s)	1263, 1801
AcoI	YGGCCR	2 cut(s)	618, 783
AcsI	RAATTY	1 cut(s)	1583
AcuI	CTGAAG	2 cut(s)	911, 1080
AcyI	GRCGYC	1 cut(s)	1246
AdeI	CACNNNGTG	1 cut(s)	921
AfaI	GTAC	4 cut(s)	743, 956, 1194, 1820
AfiI	CCNNNNNNNGG	4 cut(s)	627, 647, 648, 1105
AflIII	ACRYGT	1 cut(s)	736
AjnI	CCWGG	4 cut(s)	91, 1027, 1783, 1809
AluBI	AGCT	7 cut(s)	121, 672, 709, 889, 1204, 1573, 1895
AluI	AGCT	7 cut(s)	121, 672, 709, 889, 1204, 1573, 1895
Alw21I	GWGCWC	2 cut(s)	711, 1575
Alw26I	GTCTC	4 cut(s)	407, 815, 1036, 1090
AlwI	GGATC	2 cut(s)	1263, 1801
AoxI	GGCC	3 cut(s)	618, 783, 1557
ApeKI	GCWGC	5 cut(s)	41, 263, 1313, 1892, 1951
ApoI	RAATTY	1 cut(s)	1583
ArsI	GACNNNNNNTTYG	2 cut(s)	272, 304
Asp700I	GAANNNNTTC	3 cut(s)	1371, 1583, 1937
AspLEI	GCGC	1 cut(s)	915
AspS9I	GGNCC	1 cut(s)	572
AsuC2I	CCSGG	2 cut(s)	818, 1943
AsuHPI	GGTGA	4 cut(s)	159, 301, 422, 992
AvaII	GGWCC	1 cut(s)	572
BalI	TGGCCA	2 cut(s)	620, 785
BanI	GGYRCC	1 cut(s)	329
BanII	GRGCYC	3 cut(s)	711, 997, 1575
BbsI	GAAGAC	1 cut(s)	947
Bbv12I	GWGCWC	2 cut(s)	711, 1575
BbvCI	CCTCAGC	1 cut(s)	696
BbvI	GCAGC	5 cut(s)	28, 250, 1300, 1904, 1938
BccI	CCATC	5 cut(s)	647, 923, 1628, 1715, 1735
BciT130I	CCWGG	4 cut(s)	93, 1029, 1785, 1811
BclI	TGATCA	2 cut(s)	859, 1971
BcnI	CCSGG	2 cut(s)	818, 1943
BcoDI	GTCTC	4 cut(s)	407, 815, 1036, 1090
BfaI	CTAG	3 cut(s)	344, 875, 1250
BfmI	CTRYAG	1 cut(s)	945
BglII	AGATCT	1 cut(s)	1662
BisI	GCNGC	5 cut(s)	42, 264, 1314, 1893, 1952
BlsI	GCNGC	5 cut(s)	43, 265, 1315, 1894, 1953
Bme1390I	CCNGG	6 cut(s)	93, 818, 1029, 1785, 1811, 1943
Bme18I	GGWCC	1 cut(s)	572
BmgT120I	GGNCC	1 cut(s)	572
BmiI	GGNNCC	2 cut(s)	331, 1393
BmrFI	CCNGG	6 cut(s)	93, 818, 1029, 1785, 1811, 1943
BmrI	ACTGGG	3 cut(s)	45, 913, 1461
BmsI	GCATC	8 cut(s)	65, 415, 458, 1014, 1462, 1605, 1906, 1928
BmuI	ACTGGG	3 cut(s)	45, 913, 1461
BoxI	GACNNNNGTC	1 cut(s)	275
BpiI	GAAGAC	1 cut(s)	947
BpmI	CTGGAG	1 cut(s)	1832
Bpu10I	CCTNAGC	1 cut(s)	696
BpuEI	CTTGAG	3 cut(s)	323, 1072, 1777
BpuMI	CCSGG	2 cut(s)	818, 1943
Bsa29I	ATCGAT	2 cut(s)	243, 1258
BsaBI	GATNNNNATC	1 cut(s)	1619
BsaHI	GRCGYC	1 cut(s)	1246
BsaJI	CCNNGG	8 cut(s)	91, 553, 1401, 1531, 1554, 1560, 1783, 1878
Bsc4I	CCNNNNNNNGG	4 cut(s)	627, 647, 648, 1105
Bse118I	RCCGGY	1 cut(s)	72
Bse1I	ACTGG	8 cut(s)	40, 201, 367, 919, 1125, 1180, 1330, 1456
Bse3DI	GCAATG	1 cut(s)	195
Bse8I	GATNNNNATC	1 cut(s)	1619
BseBI	CCWGG	4 cut(s)	93, 1029, 1785, 1811
BseCI	ATCGAT	2 cut(s)	243, 1258
BseDI	CCNNGG	8 cut(s)	91, 553, 1401, 1531, 1554, 1560, 1783, 1878
BseJI	GATNNNNATC	1 cut(s)	1619
BseLI	CCNNNNNNNGG	4 cut(s)	627, 647, 648, 1105
BseMI	GCAATG	1 cut(s)	195
BseMII	CTCAG	4 cut(s)	225, 687, 974, 1618
BseNI	ACTGG	8 cut(s)	40, 201, 367, 919, 1125, 1180, 1330, 1456
BseRI	GAGGAG	3 cut(s)	215, 1125, 1583
BseXI	GCAGC	5 cut(s)	28, 250, 1300, 1904, 1938
BsgI	GTGCAG	1 cut(s)	1582
BshFI	GGCC	3 cut(s)	620, 785, 1559
BshNI	GGYRCC	1 cut(s)	329
BshVI	ATCGAT	2 cut(s)	243, 1258
BsiHKAI	GWGCWC	2 cut(s)	711, 1575
BsiSI	CCGG	3 cut(s)	73, 818, 1943
BslFI	GGGAC	1 cut(s)	206
BslI	CCNNNNNNNGG	4 cut(s)	627, 647, 648, 1105
BsmAI	GTCTC	4 cut(s)	407, 815, 1036, 1090
BsmFI	GGGAC	1 cut(s)	206
BsmI	GAATGC	1 cut(s)	1020
BsnI	GGCC	3 cut(s)	620, 785, 1559
Bsp1286I	GDGCHC	3 cut(s)	711, 997, 1575
Bsp1407I	TGTACA	2 cut(s)	741, 1818
Bsp143I	GATC	8 cut(s)	524, 859, 1161, 1255, 1259, 1662, 1806, 1971
Bsp19I	CCATGG	2 cut(s)	1531, 1560
BspACI	CCGC	4 cut(s)	82, 480, 491, 497
BspANI	GGCC	3 cut(s)	620, 785, 1559
BspCNI	CTCAG	4 cut(s)	226, 688, 973, 1617
BspDI	ATCGAT	2 cut(s)	243, 1258
BspLI	GGNNCC	2 cut(s)	331, 1393
BspPI	GGATC	2 cut(s)	1263, 1801
BspQI	GCTCTTC	1 cut(s)	1863
BspT107I	GGYRCC	1 cut(s)	329
BsrBI	CCGCTC	1 cut(s)	497
BsrDI	GCAATG	1 cut(s)	195
BsrFI	RCCGGY	1 cut(s)	72
BsrGI	TGTACA	2 cut(s)	741, 1818
BsrI	ACTGG	8 cut(s)	40, 201, 367, 919, 1125, 1180, 1330, 1456
BssAI	RCCGGY	1 cut(s)	72
BssECI	CCNNGG	8 cut(s)	91, 553, 1401, 1531, 1554, 1560, 1783, 1878
BssMI	GATC	8 cut(s)	524, 859, 1161, 1255, 1259, 1662, 1806, 1971
BssNI	GRCGYC	1 cut(s)	1246
BssT1I	CCWWGG	5 cut(s)	1401, 1531, 1554, 1560, 1878
Bst2UI	CCWGG	4 cut(s)	93, 1029, 1785, 1811
Bst6I	CTCTTC	3 cut(s)	1056, 1506, 1863
BstACI	GRCGYC	1 cut(s)	1246
BstAUI	TGTACA	2 cut(s)	741, 1818
BstC8I	GCNNGC	3 cut(s)	46, 352, 1875
BstDEI	CTNAG	4 cut(s)	234, 696, 960, 1604
BstDSI	CCRYGG	3 cut(s)	553, 1531, 1560
BstHHI	GCGC	1 cut(s)	915
BstKTI	GATC	8 cut(s)	527, 862, 1164, 1258, 1262, 1665, 1809, 1974
BstMAI	GTCTC	4 cut(s)	407, 815, 1036, 1090
BstMBI	GATC	8 cut(s)	524, 859, 1161, 1255, 1259, 1662, 1806, 1971
BstMWI	GCNNNNNNNGC	4 cut(s)	118, 488, 631, 1024
BstNI	CCWGG	4 cut(s)	93, 1029, 1785, 1811
BstNSI	RCATGY	2 cut(s)	354, 740
BstPAI	GACNNNNGTC	1 cut(s)	275
BstSCI	CCNGG	6 cut(s)	91, 816, 1027, 1783, 1809, 1941
BstSFI	CTRYAG	1 cut(s)	945
BstV1I	GCAGC	5 cut(s)	28, 250, 1300, 1904, 1938
BstV2I	GAAGAC	1 cut(s)	947
BstX2I	RGATCY	2 cut(s)	1662, 1806
BstXI	CCANNNNNNTGG	1 cut(s)	1561
BstYI	RGATCY	2 cut(s)	1662, 1806
Bsu15I	ATCGAT	2 cut(s)	243, 1258
BsuRI	GGCC	3 cut(s)	620, 785, 1559
BsuTUI	ATCGAT	2 cut(s)	243, 1258
BtgI	CCRYGG	3 cut(s)	553, 1531, 1560
BtgZI	GCGATG	1 cut(s)	37
BtsIMutI	CAGTG	4 cut(s)	208, 231, 926, 1132
Cac8I	GCNNGC	3 cut(s)	46, 352, 1875
CfoI	GCGC	1 cut(s)	915
Cfr10I	RCCGGY	1 cut(s)	72
Cfr13I	GGNCC	1 cut(s)	572
ClaI	ATCGAT	2 cut(s)	243, 1258
CseI	GACGC	1 cut(s)	1235
Csp6I	GTAC	4 cut(s)	742, 955, 1193, 1819
CspCI	CAANNNNNGTGG	2 cut(s)	1108, 1143
CviQI	GTAC	4 cut(s)	742, 955, 1193, 1819
DdeI	CTNAG	4 cut(s)	234, 696, 960, 1604
DpnI	GATC	8 cut(s)	526, 861, 1163, 1257, 1261, 1664, 1808, 1973
DpnII	GATC	8 cut(s)	524, 859, 1161, 1255, 1259, 1662, 1806, 1971
DraIII	CACNNNGTG	1 cut(s)	921
EaeI	YGGCCR	2 cut(s)	618, 783
Eam1104I	CTCTTC	3 cut(s)	1056, 1506, 1863
EarI	CTCTTC	3 cut(s)	1056, 1506, 1863
Ecl136II	GAGCTC	2 cut(s)	709, 1573
Eco130I	CCWWGG	5 cut(s)	1401, 1531, 1554, 1560, 1878
Eco24I	GRGCYC	3 cut(s)	711, 997, 1575
Eco47I	GGWCC	1 cut(s)	572
Eco53kI	GAGCTC	2 cut(s)	709, 1573
Eco57I	CTGAAG	2 cut(s)	911, 1080
EcoICRI	GAGCTC	2 cut(s)	709, 1573
EcoRI	GAATTC	1 cut(s)	1583
EcoRII	CCWGG	4 cut(s)	91, 1027, 1783, 1809
EcoT14I	CCWWGG	5 cut(s)	1401, 1531, 1554, 1560, 1878
EcoT22I	ATGCAT	2 cut(s)	258, 1921
EcoT38I	GRGCYC	3 cut(s)	711, 997, 1575
ErhI	CCWWGG	5 cut(s)	1401, 1531, 1554, 1560, 1878
FalI	AAGNNNNNCTT	2 cut(s)	1967, 1999
FaqI	GGGAC	1 cut(s)	206
FauI	CCCGC	1 cut(s)	484
FauNDI	CATATG	3 cut(s)	517, 529, 1766
FbaI	TGATCA	2 cut(s)	859, 1971
FblI	GTMKAC	2 cut(s)	279, 1330
Fnu4HI	GCNGC	5 cut(s)	42, 264, 1314, 1893, 1952
FriOI	GRGCYC	3 cut(s)	711, 997, 1575
Fsp4HI	GCNGC	5 cut(s)	42, 264, 1314, 1893, 1952
FspBI	CTAG	3 cut(s)	344, 875, 1250
GlaI	GCGC	1 cut(s)	914
GluI	GCNGC	5 cut(s)	42, 264, 1314, 1893, 1952
GsuI	CTGGAG	1 cut(s)	1832
HaeIII	GGCC	3 cut(s)	620, 785, 1559
HapII	CCGG	3 cut(s)	73, 818, 1943
HgaI	GACGC	1 cut(s)	1235
HhaI	GCGC	1 cut(s)	915
Hin1I	GRCGYC	1 cut(s)	1246
Hin6I	GCGC	1 cut(s)	913
HinP1I	GCGC	1 cut(s)	913
HincII	GTYRAC	2 cut(s)	217, 280
HindII	GTYRAC	2 cut(s)	217, 280
HindIII	AAGCTT	1 cut(s)	119
HpaII	CCGG	3 cut(s)	73, 818, 1943
HphI	GGTGA	4 cut(s)	159, 301, 422, 992
Hpy188III	TCNNGA	9 cut(s)	373, 587, 968, 1159, 1250, 1432, 1484, 1494, 1576
HpyAV	CCTTC	4 cut(s)	161, 1125, 1481, 1993
HpyCH4IV	ACGT	1 cut(s)	663
HpyCH4V	TGCA	8 cut(s)	256, 354, 625, 798, 1416, 1599, 1892, 1919
HpyF10VI	GCNNNNNNNGC	4 cut(s)	118, 488, 631, 1024
HpyF3I	CTNAG	4 cut(s)	234, 696, 960, 1604
HpySE526I	ACGT	1 cut(s)	663
Hsp92I	GRCGYC	1 cut(s)	1246
HspAI	GCGC	1 cut(s)	913
Ksp22I	TGATCA	2 cut(s)	859, 1971
Kzo9I	GATC	8 cut(s)	524, 859, 1161, 1255, 1259, 1662, 1806, 1971
LguI	GCTCTTC	1 cut(s)	1863
LmnI	GCTCC	2 cut(s)	494, 1570
Lsp1109I	GCAGC	5 cut(s)	28, 250, 1300, 1904, 1938
LweI	GCATC	8 cut(s)	65, 415, 458, 1014, 1462, 1605, 1906, 1928
MaeI	CTAG	3 cut(s)	344, 875, 1250
MaeII	ACGT	1 cut(s)	663
MaeIII	GTNAC	3 cut(s)	86, 293, 358
MalI	GATC	8 cut(s)	526, 861, 1163, 1257, 1261, 1664, 1808, 1973
MbiI	CCGCTC	1 cut(s)	497
MboI	GATC	8 cut(s)	524, 859, 1161, 1255, 1259, 1662, 1806, 1971
MfeI	CAATTG	1 cut(s)	810
MflI	RGATCY	2 cut(s)	1662, 1806
MhlI	GDGCHC	3 cut(s)	711, 997, 1575
MlsI	TGGCCA	2 cut(s)	620, 785
MluCI	AATT	8 cut(s)	172, 581, 593, 810, 1371, 1497, 1525, 1583
MluNI	TGGCCA	2 cut(s)	620, 785
MlyI	GAGTC	4 cut(s)	245, 1386, 1422, 1973
MmeI	TCCRAC	1 cut(s)	1160
Mox20I	TGGCCA	2 cut(s)	620, 785
Mph1103I	ATGCAT	2 cut(s)	258, 1921
MroXI	GAANNNNTTC	3 cut(s)	1371, 1583, 1937
MscI	TGGCCA	2 cut(s)	620, 785
MseI	TTAA	2 cut(s)	186, 1721
MslI	CAYNNNNRTG	1 cut(s)	651
Msp20I	TGGCCA	2 cut(s)	620, 785
MspI	CCGG	3 cut(s)	73, 818, 1943
MspR9I	CCNGG	6 cut(s)	93, 818, 1029, 1785, 1811, 1943
MunI	CAATTG	1 cut(s)	810
Mva1269I	GAATGC	1 cut(s)	1020
MvaI	CCWGG	4 cut(s)	93, 1029, 1785, 1811
MwoI	GCNNNNNNNGC	4 cut(s)	118, 488, 631, 1024
NciI	CCSGG	2 cut(s)	818, 1943
NcoI	CCATGG	2 cut(s)	1531, 1560
NdeI	CATATG	3 cut(s)	517, 529, 1766
NdeII	GATC	8 cut(s)	524, 859, 1161, 1255, 1259, 1662, 1806, 1971
NlaIV	GGNNCC	2 cut(s)	331, 1393
NsiI	ATGCAT	2 cut(s)	258, 1921
NspI	RCATGY	2 cut(s)	354, 740
PaeI	GCATGC	1 cut(s)	354
PciI	ACATGT	1 cut(s)	736
PciSI	GCTCTTC	1 cut(s)	1863
PctI	GAATGC	1 cut(s)	1020
PdmI	GAANNNNTTC	3 cut(s)	1371, 1583, 1937
PfeI	GAWTC	6 cut(s)	598, 964, 1055, 1076, 1222, 1352
PflFI	GACNNNGTC	2 cut(s)	212, 1592
PfoI	TCCNGGA	2 cut(s)	1809, 1941
PkrI	GCNGC	5 cut(s)	43, 265, 1315, 1894, 1953
PleI	GAGTC	4 cut(s)	244, 1385, 1422, 1972
PpsI	GAGTC	4 cut(s)	244, 1385, 1422, 1972
PscI	ACATGT	1 cut(s)	736
PshAI	GACNNNNGTC	1 cut(s)	275
PsiI	TTATAA	2 cut(s)	545, 1674
Psp124BI	GAGCTC	2 cut(s)	711, 1575
Psp6I	CCWGG	4 cut(s)	91, 1027, 1783, 1809
PspGI	CCWGG	4 cut(s)	91, 1027, 1783, 1809
PspN4I	GGNNCC	2 cut(s)	331, 1393
PspPI	GGNCC	1 cut(s)	572
PsuI	RGATCY	2 cut(s)	1662, 1806
PsyI	GACNNNGTC	2 cut(s)	212, 1592
RsaI	GTAC	4 cut(s)	743, 956, 1194, 1820
RsaNI	GTAC	4 cut(s)	742, 955, 1193, 1819
RseI	CAYNNNNRTG	1 cut(s)	651
SacI	GAGCTC	2 cut(s)	711, 1575
SalI	GTCGAC	1 cut(s)	278
SapI	GCTCTTC	1 cut(s)	1863
SaqAI	TTAA	2 cut(s)	186, 1721
SatI	GCNGC	5 cut(s)	42, 264, 1314, 1893, 1952
Sau3AI	GATC	8 cut(s)	524, 859, 1161, 1255, 1259, 1662, 1806, 1971
Sau96I	GGNCC	1 cut(s)	572
SchI	GAGTC	4 cut(s)	245, 1386, 1422, 1973
ScrFI	CCNGG	6 cut(s)	93, 818, 1029, 1785, 1811, 1943
SduI	GDGCHC	3 cut(s)	711, 997, 1575
SfaNI	GCATC	8 cut(s)	65, 415, 458, 1014, 1462, 1605, 1906, 1928
SfcI	CTRYAG	1 cut(s)	945
SinI	GGWCC	1 cut(s)	572
SmiMI	CAYNNNNRTG	1 cut(s)	651
SmlI	CTYRAG	3 cut(s)	302, 1087, 1756
SmoI	CTYRAG	3 cut(s)	302, 1087, 1756
SphI	GCATGC	1 cut(s)	354
Sse9I	AATT	8 cut(s)	172, 581, 593, 810, 1371, 1497, 1525, 1583
SsiI	CCGC	4 cut(s)	82, 480, 491, 497
SspI	AATATT	1 cut(s)	748
SspMI	CTAG	3 cut(s)	344, 875, 1250
SstI	GAGCTC	2 cut(s)	711, 1575
StyD4I	CCNGG	6 cut(s)	91, 816, 1027, 1783, 1809, 1941
StyI	CCWWGG	5 cut(s)	1401, 1531, 1554, 1560, 1878
TaiI	ACGT	1 cut(s)	666
TaqI	TCGA	9 cut(s)	243, 279, 1012, 1111, 1258, 1375, 1587, 1866, 1897
TasI	AATT	8 cut(s)	172, 581, 593, 810, 1371, 1497, 1525, 1583
TatI	WGTACW	3 cut(s)	741, 1192, 1818
TfiI	GAWTC	6 cut(s)	598, 964, 1055, 1076, 1222, 1352
Tru1I	TTAA	2 cut(s)	186, 1721
Tru9I	TTAA	2 cut(s)	186, 1721
TscAI	CASTG	4 cut(s)	208, 238, 926, 1132
TseI	GCWGC	5 cut(s)	41, 263, 1313, 1892, 1951
TspDTI	ATGAA	8 cut(s)	40, 370, 435, 598, 1245, 1454, 1642, 1923
TspGWI	ACGGA	1 cut(s)	1765
TspRI	CASTG	4 cut(s)	208, 238, 926, 1132
Tth111I	GACNNNGTC	2 cut(s)	212, 1592
VpaK11BI	GGWCC	1 cut(s)	572
XapI	RAATTY	1 cut(s)	1583
XbaI	TCTAGA	1 cut(s)	1249
XceI	RCATGY	2 cut(s)	354, 740
XcmI	CCANNNNNNNNNTGG	2 cut(s)	926, 1845
XmiI	GTMKAC	2 cut(s)	279, 1330
XmnI	GAANNNNTTC	3 cut(s)	1371, 1583, 1937
XspI	CTAG	3 cut(s)	344, 875, 1250
Zsp2I	ATGCAT	2 cut(s)	258, 1921

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.