Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0009809

Physical Location & Seq

Genomic Coordinates Forward (+)

11225392 .. 11228763

Gene Structure 3372 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g17640.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2016 bp

ATGGCTTCATATACGCCCAAAAACATCCTCATTACTGGGGCTGCTGGCTTCATTGCTTCCCATGTGGCCAACCGGCTCGTTCGCAGTCACCCTGAGTACAAAATTGTTGTGCTTGACAAGCTTGACTACTGTTCGAATCTGAAAAACCTCCTTCCCTCCAAGTCATCTCCCAATTTCAAGTTTGTTAAGGGGGACATTGGAAGTGCTGACCTTGTCAACTATCTCCTCATCACTGAGTCGATAGATACAATAATGCACTTTGCCGCCCAGACTCATGTTGACAACTCCTTTGGTAACAGCTTTGAGTTCACAAAGAACAACATCTATGGCACCCATGTTCTTCTGGAAGCATGTAAAGTCACTGGCCAAATCAGGAGGTTCATCCATGTTAGCACAGATGAAGTCTATGGTGAGACTGATGAAGATGCTGTTGTAGGAAATCATGAGGCATCTCAACTCCTTCCGACAAATCCATACTCTGCTACAAAAGCTGGAGCAGAAATGCTTGTTATGGCATATGGAAGGTCATACGGGCTGCCTGTTATAACGACTCGTGGAAACAATGTTTATGGACCAAATCAATTTCCTGAAAAATTGATTCCAAAGTTCATTCTCCTGGCTATGCAAGGGAAACCTCTTCCAATTCATGGGGATGGTGCTAATGTGAGGAGCTACTTATACTGTGAGGATGTTGCTGAGGCTTTTGAACTCATTCTTCACAAAGGAGAGGTTGGCCATGTCTACAATATTGGGACAAAGAAGGAAAGGAGAGTTATTGATGTGGCACAAGACATATGCAAACTTTTCAACATTGACGCAGAAGCATGCATCAAGTTTGTTGAAAACAGGCCTTTCAATGACCAGAGGTACTTCCTTGATGATCAGAAGTTGACGGTGTTGGGGTGGTCAGAGCGTACTGCCTGGGAAGAGGGGTTGAAGAAGACTATAGAATGGTACACTAAGAATCCTAACTGGTGGGGTGATGTATCTGGGGCACTGCTTCCTCATCCACGAATGTTGATGATGCCTGGTGGGATCGAGAGACATTTTGATGAGCCTGAAGAGGAAATATCCGAGTCTTATGTCTCAAGTAATCCTCGAATGTTGGTTCCCCCTACCAAATGCAGTGGTTCTCCTCGTAAACCTCCCTATAAGTTCTTGATCTATGGTAAGACTGGGTGGATTGGTGGTGTACTTGGGAAGCTATGTGAAAAACAAGGGATTCCTTATGAATATGGAAAAGGGCGTCTTGAGGATCGGTCTTCACTTGCTGCAGACATTCAGAATATTAAGCCAACTCATGTGTTCAATGCTGCTGGTGTGACTGGAAGACCTAATGTTGATTGGTGTGAATCTCATAAAGCAGAAACAATTCGAACCAATGTTGCTGGAACCCTAACCCTAGCAGATGTTTGCAGAGAGCATGGGCTCCTTATGATTAACTTTGCGACTGGGTGTATATTTGAGTATGATGCTAAACATCCGGAGGGTTCAGGCATTGGGTTCACTGAAGAAGATAAGCCCAACTTCTTTGGTTCTTTCTATTCAAAAACCAAGGCCATGGTTGAGGAGCTCTTGAATGAATTCGACAATGTTTGCACACTTAGAGTTCGTATGCCCATCTCATCAGACCTGAACAACCCACGTAACTTCATCACCAAGATTTCTCGTTATAACAAGGTGGTTAACATTCCTAACAGCATGACCATCTTGGATGAACTACTACCCATTTCAATTGAGATGGCGAAGCGGAACTTGAGGGGTATCTGGAACTTCACAAATCCTGGGGTCGTGAGCCATAATGAGATCCTGGAGATGTACAAGCAGTACATTGACCCAAGTTTCAAATACTCCAATTTTACAATTGAAGAGCAAGCCAAGGTTATTGTTGCTGCCCGAAGCAACAATGAAATGGATGCATCCAAGTTGAAGAAAGAGTTCCCTGAGTTGCTACCAATCAAGGAGTCACTGATAAAGTATGTCTTTGAACCAAACAAGAAAACTTCTGCAAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005911 GO:0006139 GO:0006725 GO:0006793 GO:0006807 GO:0006810 GO:0008150 GO:0008152 GO:0009058 GO:0009225 GO:0009226 GO:0009506 GO:0009812 GO:0009813 GO:0009914 GO:0009966 GO:0009987 GO:0010253 GO:0010280 GO:0010315 GO:0010646 GO:0010817 GO:0010928 GO:0016829 GO:0016835 GO:0016836 GO:0018130 GO:0019438 GO:0023051 GO:0030054 GO:0030154 GO:0032502 GO:0033478 GO:0034641 GO:0034654 GO:0042127 GO:0042440 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046148 GO:0046483 GO:0048583 GO:0048869 GO:0050377 GO:0050789 GO:0050794 GO:0051179 GO:0051234 GO:0051552 GO:0051553 GO:0051554 GO:0051555 GO:0055044 GO:0055086 GO:0060918 GO:0065007 GO:0065008 GO:0071704 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00520 map00520

Pfam Domains

Protein Families

Epimerase GDP_Man_Dehyd

Protein Analysis

672

Amino Acids

75.55

Weight (kDa)

6.52

Isoelectric Point (pI)

36.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RmlD_sub_bind	PF04321	8 - 318	3.4e-15	RmlD substrate binding domain
Epimerase	PF01370	9 - 251	2.4e-55	NAD dependent epimerase/dehydratase family
Polysacc_synt_2	PF02719	9 - 280	1.3e-20	Polysaccharide biosynthesis protein
GDP_Man_Dehyd	PF16363	10 - 315	2.8e-65	GDP-mannose 4,6 dehydratase
3Beta_HSD	PF01073	10 - 235	1.3e-23	3-beta hydroxysteroid dehydrogenase/isomerase family
NAD_binding_4	PF07993	11 - 191	5.8e-19	Male sterility protein
RmlD_sub_bind	PF04321	385 - 520	6e-12	RmlD substrate binding domain
Epimerase	PF01370	388 - 497	1.8e-09	NAD dependent epimerase/dehydratase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0009809)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78570
fragaria_vesca	FvH4_3g17640 FvH4_3g17640 FvH4_3g17640
malus_domestica	MD03G1250400.v1.1 MD11G1270500.v1.1
prunus_persica	Prupe.4G155800_v2.0.a1 Prupe.4G155800_v2.0.a1 Prupe.4G155800_v2.0.a1
pyrus_communis	pycom11g23940
rosa_chinensis	RchiOBHm_Chr5g0029371
rosa_laevigata	RLG00000033159
rosa_multiflora	Rmu_sc0004373.1_g000022
rosa_roxburghii	Rroxscaffold_1G00050590
rosa_rugosa	Rorug05G0113800 Rorug05G0113900
rosa_samantha	Rh5AG205700 Rh5BG204100 Rh5CG226000 Rh5DG207700
rosa_wichuraiana	Rw5G018720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	545, 1674
AccB1I	GGYRCC	1 cut(s)	329
AccB7I	CCANNNNNTGG	1 cut(s)	647
AccI	GTMKAC	1 cut(s)	741
AccIII	TCCGGA	1 cut(s)	1483
AciI	CCGC	2 cut(s)	264, 1750
AclWI	GGATC	3 cut(s)	1043, 1263, 1801
AcoI	YGGCCR	3 cut(s)	66, 364, 733
AcsI	RAATTY	1 cut(s)	1583
AcuI	CTGAAG	2 cut(s)	1080, 1530
AcyI	GRCGYC	1 cut(s)	1246
AfaI	GTAC	7 cut(s)	98, 869, 916, 956, 1194, 1820, 1829
AfiI	CCNNNNNNNGG	1 cut(s)	647
AjnI	CCWGG	5 cut(s)	615, 920, 1027, 1783, 1809
AluBI	AGCT	6 cut(s)	121, 300, 491, 672, 1204, 1573
AluI	AGCT	6 cut(s)	121, 300, 491, 672, 1204, 1573
Alw21I	GWGCWC	1 cut(s)	1575
Alw26I	GTCTC	3 cut(s)	407, 1036, 1090
AlwI	GGATC	3 cut(s)	1043, 1263, 1801
Aor13HI	TCCGGA	1 cut(s)	1483
AoxI	GGCC	5 cut(s)	66, 364, 733, 848, 1557
ApeKI	GCWGC	5 cut(s)	41, 535, 1271, 1313, 1892
ApoI	RAATTY	1 cut(s)	1583
ArsI	GACNNNNNNTTYG	2 cut(s)	272, 304
Asp700I	GAANNNNTTC	4 cut(s)	711, 1371, 1583, 1937
AspS9I	GGNCC	1 cut(s)	572
AsuHPI	GGTGA	4 cut(s)	80, 422, 992, 1648
AsuII	TTCGAA	2 cut(s)	134, 1375
AvaII	GGWCC	1 cut(s)	572
BaeGI	GKGCMC	1 cut(s)	997
BalI	TGGCCA	3 cut(s)	68, 366, 735
BanI	GGYRCC	1 cut(s)	329
BanII	GRGCYC	2 cut(s)	1431, 1575
BauI	CACGAG	1 cut(s)	552
BbsI	GAAGAC	3 cut(s)	947, 1254, 1336
Bbv12I	GWGCWC	1 cut(s)	1575
BbvCI	CCTCAGC	1 cut(s)	696
BbvI	GCAGC	5 cut(s)	28, 522, 1258, 1300, 1879
BccI	CCATC	4 cut(s)	647, 1628, 1715, 1735
BciT130I	CCWGG	5 cut(s)	617, 922, 1029, 1785, 1811
BclI	TGATCA	1 cut(s)	880
BcoDI	GTCTC	3 cut(s)	407, 1036, 1090
BfaI	CTAG	1 cut(s)	1403
BfmI	CTRYAG	2 cut(s)	945, 1272
BisI	GCNGC	6 cut(s)	42, 264, 536, 1272, 1314, 1893
BlsI	GCNGC	6 cut(s)	43, 265, 537, 1273, 1315, 1894
Bme1390I	CCNGG	5 cut(s)	617, 922, 1029, 1785, 1811
Bme18I	GGWCC	1 cut(s)	572
BmgT120I	GGNCC	1 cut(s)	572
BmiI	GGNNCC	4 cut(s)	331, 1110, 1393, 1430
BmrFI	CCNGG	5 cut(s)	617, 922, 1029, 1785, 1811
BmrI	ACTGGG	3 cut(s)	45, 1185, 1461
BmsI	GCATC	7 cut(s)	415, 458, 837, 1014, 1462, 1906, 1928
BmuI	ACTGGG	3 cut(s)	45, 1185, 1461
BpiI	GAAGAC	3 cut(s)	947, 1254, 1336
BpmI	CTGGAG	2 cut(s)	513, 1832
Bpu10I	CCTNAGC	1 cut(s)	696
Bpu14I	TTCGAA	2 cut(s)	134, 1375
BpuEI	CTTGAG	3 cut(s)	1072, 1271, 1777
BsaAI	YACGTR	1 cut(s)	1646
BsaHI	GRCGYC	1 cut(s)	1246
BsaJI	CCNNGG	5 cut(s)	921, 1554, 1560, 1784, 1878
BsaWI	WCCGGW	1 cut(s)	1483
Bsc4I	CCNNNNNNNGG	1 cut(s)	647
Bse118I	RCCGGY	1 cut(s)	72
Bse1I	ACTGG	6 cut(s)	40, 367, 977, 1180, 1330, 1456
Bse3DI	GCAATG	1 cut(s)	51
BseAI	TCCGGA	1 cut(s)	1483
BseBI	CCWGG	5 cut(s)	617, 922, 1029, 1785, 1811
BseDI	CCNNGG	5 cut(s)	921, 1554, 1560, 1784, 1878
BseGI	GGATG	9 cut(s)	24, 381, 658, 694, 1006, 1480, 1720, 1919, 1921
BseLI	CCNNNNNNNGG	1 cut(s)	647
BseMI	GCAATG	1 cut(s)	51
BseMII	CTCAG	4 cut(s)	84, 225, 687, 1935
BseNI	ACTGG	6 cut(s)	40, 367, 977, 1180, 1330, 1456
BseRI	GAGGAG	4 cut(s)	215, 682, 1125, 1583
BseSI	GKGCMC	1 cut(s)	997
BseXI	GCAGC	5 cut(s)	28, 522, 1258, 1300, 1879
BshFI	GGCC	5 cut(s)	68, 366, 735, 850, 1559
BshNI	GGYRCC	1 cut(s)	329
BsiHKAI	GWGCWC	1 cut(s)	1575
BsiSI	CCGG	2 cut(s)	73, 1484
BslFI	GGGAC	2 cut(s)	206, 766
BslI	CCNNNNNNNGG	1 cut(s)	647
BsmAI	GTCTC	3 cut(s)	407, 1036, 1090
BsmFI	GGGAC	2 cut(s)	206, 766
BsnI	GGCC	5 cut(s)	68, 366, 735, 850, 1559
Bsp119I	TTCGAA	2 cut(s)	134, 1375
Bsp1286I	GDGCHC	3 cut(s)	997, 1431, 1575
Bsp13I	TCCGGA	1 cut(s)	1483
Bsp1407I	TGTACA	1 cut(s)	1818
Bsp143I	GATC	5 cut(s)	880, 1035, 1161, 1255, 1806
Bsp19I	CCATGG	1 cut(s)	1560
BspACI	CCGC	2 cut(s)	264, 1750
BspANI	GGCC	5 cut(s)	68, 366, 735, 850, 1559
BspCNI	CTCAG	4 cut(s)	85, 226, 688, 1936
BspEI	TCCGGA	1 cut(s)	1483
BspHI	TCATGA	1 cut(s)	442
BspLI	GGNNCC	4 cut(s)	331, 1110, 1393, 1430
BspMAI	CTGCAG	1 cut(s)	1276
BspPI	GGATC	3 cut(s)	1043, 1263, 1801
BspQI	GCTCTTC	1 cut(s)	1863
BspT104I	TTCGAA	2 cut(s)	134, 1375
BspT107I	GGYRCC	1 cut(s)	329
BsrDI	GCAATG	1 cut(s)	51
BsrFI	RCCGGY	1 cut(s)	72
BsrGI	TGTACA	1 cut(s)	1818
BsrI	ACTGG	6 cut(s)	40, 367, 977, 1180, 1330, 1456
BssAI	RCCGGY	1 cut(s)	72
BssECI	CCNNGG	5 cut(s)	921, 1554, 1560, 1784, 1878
BssMI	GATC	5 cut(s)	880, 1035, 1161, 1255, 1806
BssNI	GRCGYC	1 cut(s)	1246
BssSI	CACGAG	1 cut(s)	552
BssT1I	CCWWGG	3 cut(s)	1554, 1560, 1878
Bst2BI	CACGAG	1 cut(s)	552
Bst2UI	CCWGG	5 cut(s)	617, 922, 1029, 1785, 1811
Bst4CI	ACNGT	3 cut(s)	131, 683, 895
Bst6I	CTCTTC	4 cut(s)	642, 921, 1056, 1863
BstACI	GRCGYC	1 cut(s)	1246
BstAUI	TGTACA	1 cut(s)	1818
BstBAI	YACGTR	1 cut(s)	1646
BstBI	TTCGAA	2 cut(s)	134, 1375
BstC8I	GCNNGC	3 cut(s)	46, 826, 1875
BstDEI	CTNAG	6 cut(s)	93, 234, 696, 960, 1604, 1944
BstDSI	CCRYGG	1 cut(s)	1560
BstF5I	GGATG	9 cut(s)	24, 381, 658, 694, 1006, 1480, 1720, 1919, 1921
BstKTI	GATC	5 cut(s)	883, 1038, 1164, 1258, 1809
BstMAI	GTCTC	3 cut(s)	407, 1036, 1090
BstMBI	GATC	5 cut(s)	880, 1035, 1161, 1255, 1806
BstMWI	GCNNNNNNNGC	2 cut(s)	118, 488
BstNI	CCWGG	5 cut(s)	617, 922, 1029, 1785, 1811
BstNSI	RCATGY	2 cut(s)	354, 828
BstSCI	CCNGG	5 cut(s)	615, 920, 1027, 1783, 1809
BstSFI	CTRYAG	2 cut(s)	945, 1272
BstSLI	GKGCMC	1 cut(s)	997
BstV1I	GCAGC	5 cut(s)	28, 522, 1258, 1300, 1879
BstV2I	GAAGAC	3 cut(s)	947, 1254, 1336
BstX2I	RGATCY	1 cut(s)	1806
BstXI	CCANNNNNNTGG	1 cut(s)	1561
BstYI	RGATCY	1 cut(s)	1806
BsuRI	GGCC	5 cut(s)	68, 366, 735, 850, 1559
BtgI	CCRYGG	1 cut(s)	1560
BtsCI	GGATG	9 cut(s)	24, 381, 658, 694, 1006, 1480, 1720, 1919, 1921
BtsI	GCAGTG	2 cut(s)	995, 1132
BtsIMutI	CAGTG	6 cut(s)	231, 360, 995, 1132, 1506, 1967
Cac8I	GCNNGC	3 cut(s)	46, 826, 1875
CciI	TCATGA	1 cut(s)	442
Cfr10I	RCCGGY	1 cut(s)	72
Cfr13I	GGNCC	1 cut(s)	572
CseI	GACGC	2 cut(s)	824, 1235
Csp6I	GTAC	7 cut(s)	97, 868, 915, 955, 1193, 1819, 1828
CspCI	CAANNNNNGTGG	4 cut(s)	999, 1034, 1108, 1143
CviQI	GTAC	7 cut(s)	97, 868, 915, 955, 1193, 1819, 1828
DdeI	CTNAG	6 cut(s)	93, 234, 696, 960, 1604, 1944
DpnI	GATC	5 cut(s)	882, 1037, 1163, 1257, 1808
DpnII	GATC	5 cut(s)	880, 1035, 1161, 1255, 1806
EaeI	YGGCCR	3 cut(s)	66, 364, 733
Eam1104I	CTCTTC	4 cut(s)	642, 921, 1056, 1863
EarI	CTCTTC	4 cut(s)	642, 921, 1056, 1863
Ecl136II	GAGCTC	1 cut(s)	1573
Eco130I	CCWWGG	3 cut(s)	1554, 1560, 1878
Eco147I	AGGCCT	1 cut(s)	850
Eco24I	GRGCYC	2 cut(s)	1431, 1575
Eco47I	GGWCC	1 cut(s)	572
Eco53kI	GAGCTC	1 cut(s)	1573
Eco57I	CTGAAG	2 cut(s)	1080, 1530
EcoICRI	GAGCTC	1 cut(s)	1573
EcoRI	GAATTC	1 cut(s)	1583
EcoRII	CCWGG	5 cut(s)	615, 920, 1027, 1783, 1809
EcoT14I	CCWWGG	3 cut(s)	1554, 1560, 1878
EcoT22I	ATGCAT	2 cut(s)	830, 1921
EcoT38I	GRGCYC	2 cut(s)	1431, 1575
ErhI	CCWWGG	3 cut(s)	1554, 1560, 1878
FalI	AAGNNNNNCTT	8 cut(s)	1233, 1265, 1511, 1543, 1739, 1771, 1967, 1999
FaqI	GGGAC	2 cut(s)	206, 766
FauNDI	CATATG	2 cut(s)	517, 794
FbaI	TGATCA	1 cut(s)	880
FblI	GTMKAC	1 cut(s)	741
Fnu4HI	GCNGC	6 cut(s)	42, 264, 536, 1272, 1314, 1893
FokI	GGATG	9 cut(s)	11, 368, 665, 701, 993, 1467, 1727, 1906, 1928
FriOI	GRGCYC	2 cut(s)	1431, 1575
Fsp4HI	GCNGC	6 cut(s)	42, 264, 536, 1272, 1314, 1893
FspBI	CTAG	1 cut(s)	1403
GluI	GCNGC	6 cut(s)	42, 264, 536, 1272, 1314, 1893
GsuI	CTGGAG	2 cut(s)	513, 1832
HaeIII	GGCC	5 cut(s)	68, 366, 735, 850, 1559
HapII	CCGG	2 cut(s)	73, 1484
HgaI	GACGC	2 cut(s)	824, 1235
Hin1I	GRCGYC	1 cut(s)	1246
HincII	GTYRAC	4 cut(s)	217, 280, 891, 1687
HindII	GTYRAC	4 cut(s)	217, 280, 891, 1687
HindIII	AAGCTT	1 cut(s)	119
HpaI	GTTAAC	1 cut(s)	1687
HpaII	CCGG	2 cut(s)	73, 1484
HphI	GGTGA	4 cut(s)	80, 422, 992, 1648
Hpy188I	TCNGA	7 cut(s)	141, 465, 885, 910, 1075, 1284, 1630
HpyAV	CCTTC	4 cut(s)	161, 470, 516, 754
HpyCH4III	ACNGT	3 cut(s)	131, 683, 895
HpyCH4IV	ACGT	1 cut(s)	1645
HpyF10VI	GCNNNNNNNGC	2 cut(s)	118, 488
HpyF3I	CTNAG	6 cut(s)	93, 234, 696, 960, 1604, 1944
HpySE526I	ACGT	1 cut(s)	1645
Hsp92I	GRCGYC	1 cut(s)	1246
Kpn2I	TCCGGA	1 cut(s)	1483
Ksp22I	TGATCA	1 cut(s)	880
KspAI	GTTAAC	1 cut(s)	1687
Kzo9I	GATC	5 cut(s)	880, 1035, 1161, 1255, 1806
LguI	GCTCTTC	1 cut(s)	1863
LmnI	GCTCC	4 cut(s)	494, 669, 1434, 1570
Lsp1109I	GCAGC	5 cut(s)	28, 522, 1258, 1300, 1879
LweI	GCATC	7 cut(s)	415, 458, 837, 1014, 1462, 1906, 1928
MaeI	CTAG	1 cut(s)	1403
MaeII	ACGT	1 cut(s)	1645
MaeIII	GTNAC	6 cut(s)	86, 293, 358, 1321, 1646, 1965
MalI	GATC	5 cut(s)	882, 1037, 1163, 1257, 1808
MboI	GATC	5 cut(s)	880, 1035, 1161, 1255, 1806
MfeI	CAATTG	2 cut(s)	1734, 1863
MflI	RGATCY	1 cut(s)	1806
MhlI	GDGCHC	3 cut(s)	997, 1431, 1575
MlsI	TGGCCA	3 cut(s)	68, 366, 735
MluNI	TGGCCA	3 cut(s)	68, 366, 735
MlyI	GAGTC	5 cut(s)	245, 265, 544, 1085, 1973
MmeI	TCCRAC	1 cut(s)	488
Mox20I	TGGCCA	3 cut(s)	68, 366, 735
Mph1103I	ATGCAT	2 cut(s)	830, 1921
MroI	TCCGGA	1 cut(s)	1483
MroXI	GAANNNNTTC	4 cut(s)	711, 1371, 1583, 1937
MscI	TGGCCA	3 cut(s)	68, 366, 735
MseI	TTAA	4 cut(s)	186, 1290, 1440, 1686
MslI	CAYNNNNRTG	2 cut(s)	651, 1050
Msp20I	TGGCCA	3 cut(s)	68, 366, 735
MspI	CCGG	2 cut(s)	73, 1484
MspR9I	CCNGG	5 cut(s)	617, 922, 1029, 1785, 1811
MunI	CAATTG	2 cut(s)	1734, 1863
MvaI	CCWGG	5 cut(s)	617, 922, 1029, 1785, 1811
MwoI	GCNNNNNNNGC	2 cut(s)	118, 488
NcoI	CCATGG	1 cut(s)	1560
NdeI	CATATG	2 cut(s)	517, 794
NdeII	GATC	5 cut(s)	880, 1035, 1161, 1255, 1806
NlaIV	GGNNCC	4 cut(s)	331, 1110, 1393, 1430
NmuCI	GTSAC	4 cut(s)	86, 358, 1321, 1965
NsiI	ATGCAT	2 cut(s)	830, 1921
NspI	RCATGY	2 cut(s)	354, 828
NspV	TTCGAA	2 cut(s)	134, 1375
PaeI	GCATGC	1 cut(s)	828
PagI	TCATGA	1 cut(s)	442
PceI	AGGCCT	1 cut(s)	850
PciSI	GCTCTTC	1 cut(s)	1863
PdmI	GAANNNNTTC	4 cut(s)	711, 1371, 1583, 1937
PfeI	GAWTC	5 cut(s)	136, 598, 964, 1222, 1352
PflFI	GACNNNGTC	1 cut(s)	212
PflMI	CCANNNNNTGG	1 cut(s)	647
PfoI	TCCNGGA	1 cut(s)	1809
PkrI	GCNGC	6 cut(s)	43, 265, 537, 1273, 1315, 1894
PleI	GAGTC	5 cut(s)	244, 265, 544, 1084, 1972
PpsI	GAGTC	5 cut(s)	244, 265, 544, 1084, 1972
Ppu21I	YACGTR	1 cut(s)	1646
PsiI	TTATAA	2 cut(s)	545, 1674
Psp124BI	GAGCTC	1 cut(s)	1575
Psp6I	CCWGG	5 cut(s)	615, 920, 1027, 1783, 1809
PspGI	CCWGG	5 cut(s)	615, 920, 1027, 1783, 1809
PspN4I	GGNNCC	4 cut(s)	331, 1110, 1393, 1430
PspPI	GGNCC	1 cut(s)	572
PstI	CTGCAG	1 cut(s)	1276
PsuI	RGATCY	1 cut(s)	1806
PsyI	GACNNNGTC	1 cut(s)	212
RsaI	GTAC	7 cut(s)	98, 869, 916, 956, 1194, 1820, 1829
RsaNI	GTAC	7 cut(s)	97, 868, 915, 955, 1193, 1819, 1828
RseI	CAYNNNNRTG	2 cut(s)	651, 1050
SacI	GAGCTC	1 cut(s)	1575
SapI	GCTCTTC	1 cut(s)	1863
SaqAI	TTAA	4 cut(s)	186, 1290, 1440, 1686
SatI	GCNGC	6 cut(s)	42, 264, 536, 1272, 1314, 1893
Sau3AI	GATC	5 cut(s)	880, 1035, 1161, 1255, 1806
Sau96I	GGNCC	1 cut(s)	572
SchI	GAGTC	5 cut(s)	245, 265, 544, 1085, 1973
ScrFI	CCNGG	5 cut(s)	617, 922, 1029, 1785, 1811
SduI	GDGCHC	3 cut(s)	997, 1431, 1575
SfaNI	GCATC	7 cut(s)	415, 458, 837, 1014, 1462, 1906, 1928
SfcI	CTRYAG	2 cut(s)	945, 1272
SfuI	TTCGAA	2 cut(s)	134, 1375
SinI	GGWCC	1 cut(s)	572
SmiMI	CAYNNNNRTG	2 cut(s)	651, 1050
SmlI	CTYRAG	3 cut(s)	1087, 1250, 1756
SmoI	CTYRAG	3 cut(s)	1087, 1250, 1756
SphI	GCATGC	1 cut(s)	828
SseBI	AGGCCT	1 cut(s)	850
SsiI	CCGC	2 cut(s)	264, 1750
SspI	AATATT	2 cut(s)	748, 1288
SspMI	CTAG	1 cut(s)	1403
SstI	GAGCTC	1 cut(s)	1575
StuI	AGGCCT	1 cut(s)	850
StyD4I	CCNGG	5 cut(s)	615, 920, 1027, 1783, 1809
StyI	CCWWGG	3 cut(s)	1554, 1560, 1878
TaaI	ACNGT	3 cut(s)	131, 683, 895
TaiI	ACGT	1 cut(s)	1648
TaqI	TCGA	6 cut(s)	134, 239, 1038, 1099, 1375, 1587
TaqII	GACCGA	1 cut(s)	1248
TatI	WGTACW	4 cut(s)	96, 1192, 1818, 1827
TauI	GCSGC	1 cut(s)	266
TfiI	GAWTC	5 cut(s)	136, 598, 964, 1222, 1352
Tru1I	TTAA	4 cut(s)	186, 1290, 1440, 1686
Tru9I	TTAA	4 cut(s)	186, 1290, 1440, 1686
TscAI	CASTG	6 cut(s)	238, 367, 1002, 1132, 1513, 1974
TseFI	GTSAC	4 cut(s)	86, 358, 1321, 1965
TseI	GCWGC	5 cut(s)	41, 535, 1271, 1313, 1892
Tsp45I	GTSAC	4 cut(s)	86, 358, 1321, 1965
TspRI	CASTG	6 cut(s)	238, 367, 1002, 1132, 1513, 1974
Tth111I	GACNNNGTC	1 cut(s)	212
Van91I	CCANNNNNTGG	1 cut(s)	647
VpaK11BI	GGWCC	1 cut(s)	572
XapI	RAATTY	1 cut(s)	1583
XceI	RCATGY	2 cut(s)	354, 828
XmiI	GTMKAC	1 cut(s)	741
XmnI	GAANNNNTTC	4 cut(s)	711, 1371, 1583, 1937
XspI	CTAG	1 cut(s)	1403
Zsp2I	ATGCAT	2 cut(s)	830, 1921

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.