Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0016134

Physical Location & Seq

Genomic Coordinates Reverse (-)

29919975 .. 29923124

Gene Structure 3150 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G79540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2343 bp

ATGAAACCACAGATGTTCTTTCGATCAGTCATTCAGTTCTATTCAAAGCCGTCATGGATGCAACGTTCCTACTCTTCCGGTAACGCCGAATTCAATATCTCCGGCGAGGTCATCAGCATTCTAGCTAAGAAGAAACCTATAGAGCCTGCTTTGGAGCCGCTTGTTCCGTTTCTCTCGAAGAATATCATCACATCGGTAATCAAAGATGAGGTCAATAGACAATTAGGATTCCGTTTTTTTATATGGGCGTCGAGAAGAGAGCGTCTCAGGAGCCGAGAGTCTTTTGGTTTGGTCATCGATATGCTCTCTGAAGATAATGGTTGCGATCTATATTGGCAGACATTGGAGGAGCTTAAATCTGGTGGCGTCTCTGTCGATTCTTATTGCTTCTGTGTTTTGATCTCTGCTTATGCTAAGATGGGTATGGCGGAAAAAGCAGTGGAATCGTTTGGAAGGATGAAGGAGTTTGATTGCAGACCCGATGTGTTCACGTACAACGTGATATTGCGAGTCATGATGCGAGAGGAGGTCTTCTTTATGCTGGCTTTTGCTGTGTACAATGAAATGCTCAAGTGCAATTGTTCCCCAAATCTATACACGTTTGGTATCTTGATGGATGGATTGTATAAGAAAGGGAGAACGAGTGATGCACAGAAGATGTTCGACGATATGACCGGTAGAGGAATTTCGCCTAACAGAGTTACCTATACCATTCTCATTTCAGGTTTGTGTCAGAGGGGAAGTGCTGACGATGCACGAAAGCTATTCTACGAGATGCAAACGAGCGGTAACTATCCTGATTCCGTCGCACACAATGCTTTGCTTGATGGGTTTTGTAAATTGGGTCGGATGGTTGAAGCATTTGAGCTGTTGCGGCTTTTTGAGAAAGATGGTTTTGTGCTTGGTCTTCGAGGTTATAGCAGTTTAATCGATGGATTGTTCAGAGCTAGGAGATACACTCAGGCATTTGAGCTGTATGCAAATATGCTGAAGAAGAATATTAAACCTGACATCATTTTGTACACGATATTGATTCAAGGGTTATCTAAAGCCGGTAAGATTGAGGATGCATTGAAGCTGTTAAGCAGCATGCCAAGTAAGGGCATTAGCCCAGATACCTACTGTTACAATGCTGTTATAAAGGCTCTATGTGGGAGGGGACTTTTGGAAGAGGGTCGGTCCCTCCAACTCGAAATGTCAGAAACGGAATCCTTCCCTGATGCGTGCACACACACAATTCTTATCTGTAGTATGTGCAGGAATGGGCTGGTTAGGGAAGCTGAAGAAATTTTTACGGAGATTGAGAAGAGTGGTTGTTCTCCTTCGGTTGCTACGTTCAATGCTTTAATTGATGGACTGTGCAAGTCCGGTGAGCTCAAGGAAGCCAGGTTATTGTTGCATAAAATGGAGGTCGGGAGACCTGCTTCCTTGTTTCTTAGGCTTTCGCACAGTGGAAACCGGAGTTTTGACACCATGGTTGAATCCGGTTCGATTCTCAAGGCATACAGGGATCTTGCACATTTTGCTGATACCGGGAGTTCGCCAGACATTGTTTCTTACAATGTTCTTATAAATGGGTTCTGCAGAGCAGGAGACATTGACGGTGCTCTCAAGCTTCTCAATGTGCTTCAACTAAAGGGATTATCCCCTGATAGCGTCACTTACAACACTCTCATCAATGGACTTCATAGAGTCGGCAGAGAAGAAGAAGCTTTTAAACTCTTTTACGCTAAAGATGATTTTAGACACAGTCCCGCGGTTTACAGATCGCTCATGACATGGTCATGTCGGAAAAGAAAAGTCTTGGTGGCTTTTAATCTATGGATGAAATACCTTAAGAAGATATCTTGTCTGGATGATGAAACAGCTAATGAGATTGAACAATGTTTCAAGGAAGGGGAAACCGAGAGAGCTTTAAGACGACTTATTGAATTAGATACCAGAAAAGACGAGTTAACTTTAGGGCCTTACACGATATGGCTTATCGGGTTATGCCAATCAGGGAGATTTCACGAGGCCTTGATGGTGTTTTCGGTTTTAAGGGAGAAGAAGATCCTTGTAACACCTCCGAGCTGTGTCAAACTGATTCATGGACTCTGCAAAAGAGAACAACTTGATGCTGCAATAGAGGTGTTCTTATACACTCTAGATAACAACTTCAAGCTGATGCCTAGAGTTTGCAACTACCTCCTAAGCTCCCTCCTGGAATCAACAGAAAAGATGGAGATTGTTTCGCAACTTACAAACAGAATGGAACGTGCAGGGTACAATGTTGACTCGATGCTTCGATTCGAGATTTTGAAATATCATAGACATAGAAAGCAGGTGCTGATAGATCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

780

Amino Acids

88.85

Weight (kDa)

8.44

Isoelectric Point (pI)

44.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_3	PF13812	115 - 172	1.1e-09	Pentatricopeptide repeat domain
PPR_2	PF13041	127 - 172	5.1e-09	PPR repeat family
PPR_2	PF13041	181 - 210	1.7e-07	PPR repeat family
PPR_1	PF12854	193 - 225	2.7e-07	PPR repeat
PPR_2	PF13041	203 - 245	6.3e-14	PPR repeat family
PPR_3	PF13812	220 - 276	3e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	227 - 259	6.9e-12	PPR repeat
PPR	PF01535	234 - 263	1e-07	PPR repeat
PPR_2	PF13041	239 - 280	5.7e-09	PPR repeat family
PPR_1	PF12854	266 - 292	7.3e-07	PPR repeat
PPR_2	PF13041	306 - 350	2.4e-11	PPR repeat family
PPR_3	PF13812	326 - 385	4.7e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	332 - 364	1.7e-08	PPR repeat
PPR_2	PF13041	336 - 384	1e-15	PPR repeat family
PPR	PF01535	340 - 369	1.6e-06	PPR repeat
PPR_2	PF13041	371 - 420	9.4e-09	PPR repeat family
PPR_1	PF12854	405 - 434	1.6e-08	PPR repeat
PPR_3	PF13812	405 - 451	6.7e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	406 - 455	5.6e-14	PPR repeat family
PPR_1	PF12854	438 - 470	1e-11	PPR repeat
PPR_2	PF13041	441 - 470	6.9e-06	PPR repeat family
PPR	PF01535	445 - 470	4.4e-06	PPR repeat
PPR_3	PF13812	511 - 560	4.6e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	512 - 541	2.7e-11	PPR repeat
PPR_2	PF13041	515 - 563	1.4e-17	PPR repeat family
PPR	PF01535	518 - 547	9e-07	PPR repeat
PPR_1	PF12854	546 - 575	3.9e-09	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0016134)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79540
fragaria_vesca	FvH4_3g13661
malus_domestica	MD05G1241300.v1.1
prunus_persica	Prupe.4G124200_v2.0.a1 Prupe.4G124200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0022901
rosa_laevigata	RLG00000032681
rosa_multiflora	Rmu_co8399345.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056430
rosa_rugosa	Rorug05G0075400
rosa_samantha	Rh5AG161900 Rh5BG161100 Rh5CG175600 Rh5DG162300
rosa_wichuraiana	Rw5G014570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1139, 1571
AarI	CACCTGC	1 cut(s)	2314
Acc36I	ACCTGC	2 cut(s)	1429, 2314
AccBSI	CCGCTC	1 cut(s)	786
AccII	CGCG	1 cut(s)	1757
AciI	CCGC	6 cut(s)	158, 428, 786, 874, 1755, 1757
AclI	AACGTT	1 cut(s)	64
AclWI	GGATC	2 cut(s)	1518, 2047
AcsI	RAATTY	3 cut(s)	89, 684, 1287
AcuI	CTGAAG	3 cut(s)	330, 1010, 1302
AcyI	GRCGYC	2 cut(s)	248, 366
AfaI	GTAC	4 cut(s)	494, 557, 1022, 2267
AfiI	CCNNNNNNNGG	1 cut(s)	1100
AflII	CTTAAG	1 cut(s)	1835
AflIII	ACRYGT	1 cut(s)	597
AgeI	ACCGGT	1 cut(s)	674
AjnI	CCWGG	2 cut(s)	1385, 2202
AloI	GAACNNNNNNTCC	2 cut(s)	49, 81
Alw21I	GWGCWC	3 cut(s)	1229, 1377, 1609
Alw26I	GTCTC	4 cut(s)	269, 373, 1411, 1587
Alw44I	GTGCAC	1 cut(s)	1225
AlwI	GGATC	2 cut(s)	1518, 2047
AlwNI	CAGNNNCTG	1 cut(s)	2329
AoxI	GGCC	2 cut(s)	1964, 2016
ApaLI	GTGCAC	1 cut(s)	1225
ApeKI	GCWGC	2 cut(s)	1086, 2120
ApoI	RAATTY	3 cut(s)	89, 684, 1287
ArsI	GACNNNNNNTTYG	2 cut(s)	195, 227
AsiGI	ACCGGT	1 cut(s)	674
Asp700I	GAANNNNTTC	1 cut(s)	659
AspS9I	GGNCC	2 cut(s)	1179, 1964
AsuC2I	CCSGG	1 cut(s)	1534
AsuHPI	GGTGA	1 cut(s)	1382
AvaII	GGWCC	1 cut(s)	1179
BaeGI	GKGCMC	1 cut(s)	1229
BanII	GRGCYC	1 cut(s)	1377
BauI	CACGAG	1 cut(s)	2012
BbsI	GAAGAC	2 cut(s)	523, 899
Bbv12I	GWGCWC	3 cut(s)	1229, 1377, 1609
BbvI	GCAGC	2 cut(s)	1098, 2107
BceAI	ACGGC	1 cut(s)	34
BcgI	CGANNNNNNTGC	4 cut(s)	426, 460, 910, 944
BciT130I	CCWGG	2 cut(s)	1387, 2204
BcnI	CCSGG	1 cut(s)	1534
BcoDI	GTCTC	4 cut(s)	269, 373, 1411, 1587
BfaI	CTAG	4 cut(s)	122, 948, 2147, 2172
BfmI	CTRYAG	3 cut(s)	138, 1246, 1582
BfrI	CTTAAG	1 cut(s)	1835
BfuAI	ACCTGC	2 cut(s)	1429, 2314
BglII	AGATCT	1 cut(s)	2335
BisI	GCNGC	4 cut(s)	158, 875, 1087, 2121
BlsI	GCNGC	4 cut(s)	159, 876, 1088, 2122
Bme1390I	CCNGG	3 cut(s)	1387, 1534, 2204
Bme18I	GGWCC	1 cut(s)	1179
BmgT120I	GGNCC	2 cut(s)	1179, 1964
BmiI	GGNNCC	3 cut(s)	156, 272, 1181
BmrFI	CCNGG	3 cut(s)	1387, 1534, 2204
BpiI	GAAGAC	2 cut(s)	523, 899
BplI	GAGNNNNNCTC	4 cut(s)	249, 281, 943, 975
Bpu10I	CCTNAGC	1 cut(s)	2192
BpuEI	CTTGAG	4 cut(s)	554, 1361, 1481, 1595
BpuMI	CCSGG	1 cut(s)	1534
Bsa29I	ATCGAT	2 cut(s)	297, 930
BsaAI	YACGTR	1 cut(s)	492
BsaHI	GRCGYC	2 cut(s)	248, 366
BsaI	GGTCTC	1 cut(s)	1411
BsaJI	CCNNGG	2 cut(s)	1473, 1755
BsaWI	WCCGGW	5 cut(s)	77, 674, 1367, 1458, 1484
BsaXI	ACNNNNNCTCC	2 cut(s)	628, 658
Bsc4I	CCNNNNNNNGG	1 cut(s)	1100
Bse118I	RCCGGY	2 cut(s)	674, 1052
BseBI	CCWGG	2 cut(s)	1387, 2204
BseCI	ATCGAT	2 cut(s)	297, 930
BseDI	CCNNGG	2 cut(s)	1473, 1755
BseGI	GGATG	7 cut(s)	63, 462, 622, 855, 1072, 1830, 1861
BseLI	CCNNNNNNNGG	1 cut(s)	1100
BseMII	CTCAG	2 cut(s)	280, 974
BseRI	GAGGAG	2 cut(s)	362, 539
BseSI	GKGCMC	1 cut(s)	1229
BseXI	GCAGC	2 cut(s)	1098, 2107
BsgI	GTGCAG	2 cut(s)	1276, 2280
Bsh1236I	CGCG	1 cut(s)	1757
BshFI	GGCC	2 cut(s)	1966, 2018
BshTI	ACCGGT	1 cut(s)	674
BshVI	ATCGAT	2 cut(s)	297, 930
BsiHKAI	GWGCWC	3 cut(s)	1229, 1377, 1609
BsiSI	CCGG	8 cut(s)	78, 102, 675, 1053, 1368, 1459, 1485, 1533
BslFI	GGGAC	3 cut(s)	1165, 1173, 1737
BslI	CCNNNNNNNGG	1 cut(s)	1100
BsmAI	GTCTC	4 cut(s)	269, 373, 1411, 1587
BsmBI	CGTCTC	2 cut(s)	269, 373
BsmFI	GGGAC	3 cut(s)	1165, 1173, 1737
BsmI	GAATGC	1 cut(s)	117
BsnI	GGCC	2 cut(s)	1966, 2018
Bso31I	GGTCTC	1 cut(s)	1411
Bsp1286I	GDGCHC	3 cut(s)	1229, 1377, 1609
Bsp1407I	TGTACA	2 cut(s)	555, 1020
Bsp143I	GATC	7 cut(s)	23, 325, 399, 1510, 1766, 2052, 2335
Bsp19I	CCATGG	1 cut(s)	1473
BspACI	CCGC	6 cut(s)	158, 428, 786, 874, 1755, 1757
BspANI	GGCC	2 cut(s)	1966, 2018
BspCNI	CTCAG	2 cut(s)	279, 973
BspDI	ATCGAT	2 cut(s)	297, 930
BspFNI	CGCG	1 cut(s)	1757
BspHI	TCATGA	2 cut(s)	513, 1773
BspLI	GGNNCC	3 cut(s)	156, 272, 1181
BspMAI	CTGCAG	1 cut(s)	1586
BspMI	ACCTGC	2 cut(s)	1429, 2314
BspPI	GGATC	2 cut(s)	1518, 2047
BspTI	CTTAAG	1 cut(s)	1835
BspTNI	GGTCTC	1 cut(s)	1411
BsrBI	CCGCTC	1 cut(s)	786
BsrFI	RCCGGY	2 cut(s)	674, 1052
BsrGI	TGTACA	2 cut(s)	555, 1020
BssAI	RCCGGY	2 cut(s)	674, 1052
BssECI	CCNNGG	2 cut(s)	1473, 1755
BssMI	GATC	7 cut(s)	23, 325, 399, 1510, 1766, 2052, 2335
BssNI	GRCGYC	2 cut(s)	248, 366
BssSI	CACGAG	1 cut(s)	2012
BssT1I	CCWWGG	1 cut(s)	1473
Bst2BI	CACGAG	1 cut(s)	2012
Bst2UI	CCWGG	2 cut(s)	1387, 2204
Bst4CI	ACNGT	5 cut(s)	1124, 1359, 1451, 1604, 1751
Bst6I	CTCTTC	4 cut(s)	79, 250, 1164, 1301
BstACI	GRCGYC	2 cut(s)	248, 366
BstAFI	CTTAAG	1 cut(s)	1835
BstAPI	GCANNNNNTGC	2 cut(s)	815, 1523
BstAUI	TGTACA	2 cut(s)	555, 1020
BstBAI	YACGTR	1 cut(s)	492
BstC8I	GCNNGC	4 cut(s)	147, 543, 1091, 1225
BstDEI	CTNAG	6 cut(s)	126, 266, 414, 960, 1436, 2192
BstDSI	CCRYGG	2 cut(s)	1473, 1755
BstF5I	GGATG	7 cut(s)	63, 462, 622, 855, 1072, 1830, 1861
BstFNI	CGCG	1 cut(s)	1757
BstKTI	GATC	7 cut(s)	26, 328, 402, 1513, 1769, 2055, 2338
BstMAI	GTCTC	4 cut(s)	269, 373, 1411, 1587
BstMBI	GATC	7 cut(s)	23, 325, 399, 1510, 1766, 2052, 2335
BstMWI	GCNNNNNNNGC	5 cut(s)	434, 752, 815, 874, 1523
BstNI	CCWGG	2 cut(s)	1387, 2204
BstNSI	RCATGY	1 cut(s)	1093
BstSCI	CCNGG	3 cut(s)	1385, 1532, 2202
BstSFI	CTRYAG	3 cut(s)	138, 1246, 1582
BstSLI	GKGCMC	1 cut(s)	1229
BstUI	CGCG	1 cut(s)	1757
BstV1I	GCAGC	2 cut(s)	1098, 2107
BstV2I	GAAGAC	2 cut(s)	523, 899
BstX2I	RGATCY	3 cut(s)	1510, 2052, 2335
BstYI	RGATCY	3 cut(s)	1510, 2052, 2335
Bsu15I	ATCGAT	2 cut(s)	297, 930
BsuRI	GGCC	2 cut(s)	1966, 2018
BsuTUI	ATCGAT	2 cut(s)	297, 930
BtgI	CCRYGG	2 cut(s)	1473, 1755
BtsCI	GGATG	7 cut(s)	63, 462, 622, 855, 1072, 1830, 1861
BtsI	GCAGTG	1 cut(s)	444
BtsIMutI	CAGTG	2 cut(s)	444, 1456
BveI	ACCTGC	2 cut(s)	1429, 2314
Cac8I	GCNNGC	4 cut(s)	147, 543, 1091, 1225
CaiI	CAGNNNCTG	1 cut(s)	2329
CciI	TCATGA	2 cut(s)	513, 1773
Cfr10I	RCCGGY	2 cut(s)	674, 1052
Cfr13I	GGNCC	2 cut(s)	1179, 1964
Cfr42I	CCGCGG	1 cut(s)	1758
ClaI	ATCGAT	2 cut(s)	297, 930
CseI	GACGC	4 cut(s)	237, 251, 355, 1645
Csp6I	GTAC	4 cut(s)	493, 556, 1021, 2266
CspAI	ACCGGT	1 cut(s)	674
CviAII	CATG	8 cut(s)	54, 514, 1090, 1474, 1774, 1779, 1785, 2090
CviQI	GTAC	4 cut(s)	493, 556, 1021, 2266
DdeI	CTNAG	6 cut(s)	126, 266, 414, 960, 1436, 2192
DpnI	GATC	7 cut(s)	25, 327, 401, 1512, 1768, 2054, 2337
DpnII	GATC	7 cut(s)	23, 325, 399, 1510, 1766, 2052, 2335
DraI	TTTAAA	1 cut(s)	1717
Eam1104I	CTCTTC	4 cut(s)	79, 250, 1164, 1301
EarI	CTCTTC	4 cut(s)	79, 250, 1164, 1301
EciI	GGCGGA	1 cut(s)	443
Ecl136II	GAGCTC	1 cut(s)	1375
Eco130I	CCWWGG	1 cut(s)	1473
Eco147I	AGGCCT	1 cut(s)	2018
Eco24I	GRGCYC	1 cut(s)	1377
Eco31I	GGTCTC	1 cut(s)	1411
Eco32I	GATATC	1 cut(s)	1845
Eco47I	GGWCC	1 cut(s)	1179
Eco53kI	GAGCTC	1 cut(s)	1375
Eco57I	CTGAAG	3 cut(s)	330, 1010, 1302
EcoICRI	GAGCTC	1 cut(s)	1375
EcoO109I	RGGNCCY	1 cut(s)	1964
EcoRI	GAATTC	1 cut(s)	89
EcoRII	CCWGG	2 cut(s)	1385, 2202
EcoRV	GATATC	1 cut(s)	1845
EcoT14I	CCWWGG	1 cut(s)	1473
EcoT22I	ATGCAT	1 cut(s)	1072
EcoT38I	GRGCYC	1 cut(s)	1377
ErhI	CCWWGG	1 cut(s)	1473
Esp3I	CGTCTC	2 cut(s)	269, 373
FaeI	CATG	8 cut(s)	57, 517, 1093, 1477, 1777, 1782, 1788, 2093
FaqI	GGGAC	3 cut(s)	1165, 1173, 1737
FatI	CATG	8 cut(s)	53, 513, 1089, 1473, 1773, 1778, 1784, 2089
FauI	CCCGC	1 cut(s)	1762
Fnu4HI	GCNGC	4 cut(s)	158, 875, 1087, 2121
FokI	GGATG	7 cut(s)	70, 469, 629, 862, 1079, 1837, 1868
FriOI	GRGCYC	1 cut(s)	1377
Fsp4HI	GCNGC	4 cut(s)	158, 875, 1087, 2121
FspBI	CTAG	4 cut(s)	122, 948, 2147, 2172
GluI	GCNGC	4 cut(s)	158, 875, 1087, 2121
HaeIII	GGCC	2 cut(s)	1966, 2018
HapII	CCGG	8 cut(s)	78, 102, 675, 1053, 1368, 1459, 1485, 1533
HgaI	GACGC	4 cut(s)	237, 251, 355, 1645
Hin1I	GRCGYC	2 cut(s)	248, 366
Hin1II	CATG	8 cut(s)	57, 517, 1093, 1477, 1777, 1782, 1788, 2093
HincII	GTYRAC	2 cut(s)	1956, 2275
HindII	GTYRAC	2 cut(s)	1956, 2275
HindIII	AAGCTT	2 cut(s)	1613, 1710
HpaI	GTTAAC	1 cut(s)	1956
HpaII	CCGG	8 cut(s)	78, 102, 675, 1053, 1368, 1459, 1485, 1533
HphI	GGTGA	1 cut(s)	1382
Hpy166II	GTNNAC	7 cut(s)	489, 556, 1023, 1227, 1762, 1956, 2275
Hpy188I	TCNGA	7 cut(s)	310, 735, 849, 944, 1201, 1791, 2070
Hpy8I	GTNNAC	7 cut(s)	489, 556, 1023, 1227, 1762, 1956, 2275
Hpy99I	CGWCG	3 cut(s)	253, 668, 809
HpyAV	CCTTC	5 cut(s)	447, 454, 1222, 1332, 1889
HpyCH4III	ACNGT	5 cut(s)	1124, 1359, 1451, 1604, 1751
HpyCH4IV	ACGT	6 cut(s)	64, 491, 498, 599, 1334, 2257
HpyF10VI	GCNNNNNNNGC	5 cut(s)	434, 752, 815, 874, 1523
HpyF3I	CTNAG	6 cut(s)	126, 266, 414, 960, 1436, 2192
HpySE526I	ACGT	6 cut(s)	64, 491, 498, 599, 1334, 2257
Hsp92I	GRCGYC	2 cut(s)	248, 366
Hsp92II	CATG	8 cut(s)	57, 517, 1093, 1477, 1777, 1782, 1788, 2093
KspAI	GTTAAC	1 cut(s)	1956
KspI	CCGCGG	1 cut(s)	1758
Kzo9I	GATC	7 cut(s)	23, 325, 399, 1510, 1766, 2052, 2335
LmnI	GCTCC	4 cut(s)	154, 270, 349, 2201
Lsp1109I	GCAGC	2 cut(s)	1098, 2107
MaeI	CTAG	4 cut(s)	122, 948, 2147, 2172
MaeII	ACGT	6 cut(s)	64, 491, 498, 599, 1334, 2257
MaeIII	GTNAC	6 cut(s)	80, 700, 788, 1124, 1657, 2059
MalI	GATC	7 cut(s)	25, 327, 401, 1512, 1768, 2054, 2337
MbiI	CCGCTC	1 cut(s)	786
MboI	GATC	7 cut(s)	23, 325, 399, 1510, 1766, 2052, 2335
MfeI	CAATTG	1 cut(s)	577
MflI	RGATCY	3 cut(s)	1510, 2052, 2335
MhlI	GDGCHC	3 cut(s)	1229, 1377, 1609
MluCI	AATT	9 cut(s)	89, 221, 577, 684, 839, 1236, 1287, 1347, 1931
MlyI	GAGTC	5 cut(s)	287, 519, 1701, 2088, 2270
MmeI	TCCRAC	3 cut(s)	827, 1210, 1769
Mph1103I	ATGCAT	1 cut(s)	1072
MroXI	GAANNNNTTC	1 cut(s)	659
MslI	CAYNNNNRTG	2 cut(s)	299, 1783
MspA1I	CMGCKG	1 cut(s)	1757
MspCI	CTTAAG	1 cut(s)	1835
MspI	CCGG	8 cut(s)	78, 102, 675, 1053, 1368, 1459, 1485, 1533
MspR9I	CCNGG	3 cut(s)	1387, 1534, 2204
MunI	CAATTG	1 cut(s)	577
Mva1269I	GAATGC	1 cut(s)	117
MvaI	CCWGG	2 cut(s)	1387, 2204
MvnI	CGCG	1 cut(s)	1757
MwoI	GCNNNNNNNGC	5 cut(s)	434, 752, 815, 874, 1523
NciI	CCSGG	1 cut(s)	1534
NcoI	CCATGG	1 cut(s)	1473
NdeII	GATC	7 cut(s)	23, 325, 399, 1510, 1766, 2052, 2335
NlaIII	CATG	8 cut(s)	57, 517, 1093, 1477, 1777, 1782, 1788, 2093
NlaIV	GGNNCC	3 cut(s)	156, 272, 1181
NmeAIII	GCCGAG	1 cut(s)	299
NmuCI	GTSAC	1 cut(s)	1657
NsiI	ATGCAT	1 cut(s)	1072
NspI	RCATGY	1 cut(s)	1093
PaeI	GCATGC	1 cut(s)	1093
PagI	TCATGA	2 cut(s)	513, 1773
PaqCI	CACCTGC	1 cut(s)	2314
PceI	AGGCCT	1 cut(s)	2018
PcsI	WCGNNNNNNNCGW	1 cut(s)	1331
PctI	GAATGC	1 cut(s)	117
PdmI	GAANNNNTTC	1 cut(s)	659
PflFI	GACNNNGTC	2 cut(s)	1749, 1780
PfoI	TCCNGGA	1 cut(s)	2202
PinAI	ACCGGT	1 cut(s)	674
PkrI	GCNGC	4 cut(s)	159, 876, 1088, 2122
PleI	GAGTC	5 cut(s)	286, 518, 1700, 2088, 2270
PpsI	GAGTC	5 cut(s)	286, 518, 1700, 2088, 2270
Ppu21I	YACGTR	1 cut(s)	492
PsiI	TTATAA	2 cut(s)	1139, 1571
Psp124BI	GAGCTC	1 cut(s)	1377
Psp1406I	AACGTT	1 cut(s)	64
Psp6I	CCWGG	2 cut(s)	1385, 2202
PspGI	CCWGG	2 cut(s)	1385, 2202
PspN4I	GGNNCC	3 cut(s)	156, 272, 1181
PspPI	GGNCC	2 cut(s)	1179, 1964
PstI	CTGCAG	1 cut(s)	1586
PstNI	CAGNNNCTG	1 cut(s)	2329
PsuI	RGATCY	3 cut(s)	1510, 2052, 2335
PsyI	GACNNNGTC	2 cut(s)	1749, 1780
RsaI	GTAC	4 cut(s)	494, 557, 1022, 2267
RsaNI	GTAC	4 cut(s)	493, 556, 1021, 2266
RseI	CAYNNNNRTG	2 cut(s)	299, 1783
SacI	GAGCTC	1 cut(s)	1377
SacII	CCGCGG	1 cut(s)	1758
SatI	GCNGC	4 cut(s)	158, 875, 1087, 2121
Sau3AI	GATC	7 cut(s)	23, 325, 399, 1510, 1766, 2052, 2335
Sau96I	GGNCC	2 cut(s)	1179, 1964
SchI	GAGTC	5 cut(s)	287, 519, 1701, 2088, 2270
ScrFI	CCNGG	3 cut(s)	1387, 1534, 2204
SduI	GDGCHC	3 cut(s)	1229, 1377, 1609
SfcI	CTRYAG	3 cut(s)	138, 1246, 1582
Sfr303I	CCGCGG	1 cut(s)	1758
SgrBI	CCGCGG	1 cut(s)	1758
SinI	GGWCC	1 cut(s)	1179
SmiMI	CAYNNNNRTG	2 cut(s)	299, 1783
SmlI	CTYRAG	5 cut(s)	569, 1376, 1496, 1610, 1835
SmoI	CTYRAG	5 cut(s)	569, 1376, 1496, 1610, 1835
SphI	GCATGC	1 cut(s)	1093
Sse9I	AATT	9 cut(s)	89, 221, 577, 684, 839, 1236, 1287, 1347, 1931
SseBI	AGGCCT	1 cut(s)	2018
SsiI	CCGC	6 cut(s)	158, 428, 786, 874, 1755, 1757
SspI	AATATT	1 cut(s)	1000
SspMI	CTAG	4 cut(s)	122, 948, 2147, 2172
SstI	GAGCTC	1 cut(s)	1377
StuI	AGGCCT	1 cut(s)	2018
StyD4I	CCNGG	3 cut(s)	1385, 1532, 2202
StyI	CCWWGG	1 cut(s)	1473
TaaI	ACNGT	5 cut(s)	1124, 1359, 1451, 1604, 1751
TaiI	ACGT	6 cut(s)	67, 494, 501, 602, 1337, 2260
TaqII	GACCGA	1 cut(s)	1167
TasI	AATT	9 cut(s)	89, 221, 577, 684, 839, 1236, 1287, 1347, 1931
TatI	WGTACW	2 cut(s)	555, 1020
TauI	GCSGC	2 cut(s)	160, 877
TscAI	CASTG	2 cut(s)	444, 1456
TseFI	GTSAC	1 cut(s)	1657
TseI	GCWGC	2 cut(s)	1086, 2120
Tsp45I	GTSAC	1 cut(s)	1657
TspDTI	ATGAA	7 cut(s)	17, 473, 576, 1676, 1841, 1875, 2078
TspGWI	ACGGA	5 cut(s)	156, 221, 793, 1220, 1310
TspRI	CASTG	2 cut(s)	444, 1456
Tth111I	GACNNNGTC	2 cut(s)	1749, 1780
Vha464I	CTTAAG	1 cut(s)	1835
VneI	GTGCAC	1 cut(s)	1225
VpaK11BI	GGWCC	1 cut(s)	1179
XapI	RAATTY	3 cut(s)	89, 684, 1287
XbaI	TCTAGA	1 cut(s)	2146
XceI	RCATGY	1 cut(s)	1093
XmnI	GAANNNNTTC	1 cut(s)	659
XspI	CTAG	4 cut(s)	122, 948, 2147, 2172
Zsp2I	ATGCAT	1 cut(s)	1072

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.