Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005711

Physical Location & Seq

Genomic Coordinates Forward (+)

30036956 .. 30041440

Gene Structure 4485 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G79840.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2244 bp

ATGTCAATGGCCGTCGACATGTCTTCCAAACAACCCACCAAAGACTTTTTCTCCTCTCCAGCCCTCTCTCTATCTCTCGCTGGGATATTCCGGAATGCATCCTCCGGCAGCACCAACCCTGAGGAGGATTTCCTGGGCAGAAGAGTAGTTGACGATGAGGATCGCACTGTGGAGATGAGCAGCGAGAACTCAGGACCCACGAGATCCAGATCAGAGGAGGATTTGGAGGGTGAGGATCACGACGATGAGGAGGAGGAAGAGGAGGACGGCGCAGCTGGAAACAAGGGCACTAATAAGAGAAAGAGGAAGAAGTATCATCGTCACACCACCGATCAGATCAGACACATGGAAGCGCTATTCAAAGAGACACCACATCCGGACGAGAAGCAAAGACAGCAGCTGAGCAAGCAACTAGGGCTGGCCCCTCGCCAGGTCAAGTTCTGGTTCCAAAACCGCCGCACACAGATCAAGGCTATTCAAGAACGGCACGAGAACTCCCTGCTCAAGGCGGAACTAGAGAAGCTGCGAGAGGAAAACAAAGCCATGAGGGAGTCTTTTTCCAAGGCTAATTCCTCCTGCCCCAACTGCGGAGGAGGCCCCGATGATCTCCACCTCGAAAACTCCAAACTGAAAGCCGAGCTCGATAAGCTTCGTGCAGCTCTTGGACGCACTCCCTATCCCCTGCAGGCTTCATGCTCCGACGATCAAGAACACCGTCTCGGCTCTCTCGATTTCTACACGGGCGTCTTTGCCCTCGAGAAGTCCCGTATTGCCGAGATTTCTAACCGAGCCACCCTTGAACTCCAGAAGATGGCCACCTCAGGCGAACCTATGTGGCTCCGCAGCGTTGAGACTGGCCGTGAGATTCTCAACTACGATGAGTACCTCAAGGAGTTTCCCCAAGCGCAAGCCTCTTCGTTTCCTGGAAGGAAAACCATCGAAGCATCTAGAGATGCGGGGATTGTGTTTATGGACGCACATAAACTTGCCCAGAGTTTCATGGACGTGGGACAATGGAAAGAGACATTTGCATGCTTGATCTCAAAGGCTGCAACGGTCGATGTTATCCGGCAAGGCGAAGGGCCTTCACGGATCGACGGGGCTATTCAGCTGATGTTCGGAGAGATGCAGCTGCTCACTCCGGTCGTCCCCACAAGAGAAGTGTACTTCGTGAGAAGCTGCCGGCAGCTGAGCCCTGAGAAATGGGCAATAGTGGACGTCTCGGTCTCCGTGGAGGACAGCAACACGGAGAAGGAGGCTTCTCTTCTGAAATGTCGAAAACTCCCCTCCGGTTGCATCATCGAGGACACCTCCAACGGTCACTCCAAGGTCACCTGGGTGGAGCACCTCGACGTGTCTGCATCCACAGTTCAGCCTCTCTTCCGCTCCTTAGTCAACACCGGTTTGGCCTTTGGGGCTCGACACTGGGTCGCCACCCTTCAGCTCCATTGCGAACGCCTTGTCTTCTTCATGGCTACCAACGTCCCCACCAAAGACTCTCTCGGAGTTACAACTCTTGCCGGGAGAAAGAGTGTGCTGAAGATGGCTCAGAGAATGACACAAAGCTTCTACCGCGCCATTGCTGCATCAAGCTACCATCAATGGACCAAAATCACCACCAAAACTGGACAAGACATGCGGGTTTCTTCCAGGAAGAACCTTCATGATCCTGGCGAGCCCACGGGAGTCATTGTCTGCGCTTCTTCTTCGCTGTGGTTACCTGTTTCTCCAGCTCTTCTCTTCGATTTCTTTAGAGATGAAGCTCGTCGGCATGAGTGGGATGCTTTGTCAAACGGAGCTCATGTTCAGTCTATTGCAAACTTATCCAAGGGACAAGACAGAGGCAACTCAGTGGCAATCCAGACAGTGAAATCGAGAGAAAAGAGCATATGGGTGCTGCAAGACAGCAGCACTAACTCGTATGAGTCGGTGGTGGTATACGCTCCCGTAGATATAAACACGACACAGCTGGTGCTCGCGGGACATGATCCAAGCAACATCCAAATCCTCCCCTCTGGATTCTCAATCATACCTGATGGAGTAGAGTCACGGCCACTGGTAATAACGTCTACACAAGACGACAGAAACAGCCAAGGAGGGTCGCTCCTGACACTCGCCCTCCAAACCCTCATCAACCCTTCTCCTGCAGCAAAGCTGAATATGGAGTCTGTGGAATCCGTGACAAACCTCGTCTCAGTCACACTACACAACATTAAGAGAAGTCTACAAATCGAAGATTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

747

Amino Acids

83.21

Weight (kDa)

6.08

Isoelectric Point (pI)

52.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	102 - 157	1.2e-18	Homeodomain
START	PF01852	260 - 486	3.9e-59	START domain
PDF2_C	PF25797	505 - 743	3.6e-97	PDF2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005711)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79840 AT1G79840 AT1G79840 AT1G79840 AT1G79840 AT1G79840
fragaria_vesca	FvH4_6g31780 FvH4_6g31780 FvH4_6g31780 FvH4_6g31780 FvH4_6g31780 FvH4_6g31780
malus_domestica	MD09G1209300.v1.1 MD17G1191000.v1.1
prunus_persica	Prupe.3G067200_v2.0.a1
pyrus_communis	pycom09g12540 pycom17g19810
rosa_chinensis	RchiOBHm_Chr2g0138951
rosa_laevigata	RLG00000019771
rosa_multiflora	Rmu_sc0001376.1_g000004
rosa_roxburghii	Rroxscaffold_2G00105840
rosa_rugosa	Rorug02G0353500 Rorug02G0353600
rosa_samantha	Rh2AG403500 Rh2BG413900 Rh2CG389600 Rh2DG423700
rosa_wichuraiana	Rw2G032830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1223
AatII	GACGTC	1 cut(s)	1221
AccB7I	CCANNNNNTGG	1 cut(s)	811
AccBSI	CCGCTC	1 cut(s)	1386
AccI	GTMKAC	4 cut(s)	15, 1938, 2069, 2224
AccII	CGCG	2 cut(s)	1575, 1979
AccIII	TCCGGA	2 cut(s)	90, 376
AclWI	GGATC	6 cut(s)	168, 198, 243, 1100, 1661, 1982
AcoI	YGGCCR	4 cut(s)	9, 813, 856, 2051
AcuI	CTGAAG	2 cut(s)	1424, 1559
AcyI	GRCGYC	2 cut(s)	744, 1218
AfaI	GTAC	2 cut(s)	884, 1166
AfeI	AGCGCT	1 cut(s)	354
AfiI	CCNNNNNNNGG	5 cut(s)	124, 430, 505, 587, 811
AflIII	ACRYGT	2 cut(s)	18, 1353
AgeI	ACCGGT	1 cut(s)	1400
AgsI	TTSAA	3 cut(s)	361, 479, 800
AhdI	GACNNNNNGTC	1 cut(s)	1427
AjiI	CACGTC	2 cut(s)	1006, 1354
AjnI	CCWGG	6 cut(s)	132, 429, 922, 1334, 1649, 1669
AjuI	GAANNNNNNNTTGG	2 cut(s)	32, 64
AleI	CACNNNNGTG	1 cut(s)	1337
AloI	GAACNNNNNNTCC	2 cut(s)	1788, 1820
Alw21I	GWGCWC	4 cut(s)	642, 1347, 1801, 1977
Alw26I	GTCTC	7 cut(s)	359, 722, 845, 1016, 1225, 1231, 2197
AlwI	GGATC	6 cut(s)	168, 198, 243, 1100, 1661, 1982
AlwNI	CAGNNNCTG	1 cut(s)	400
Ama87I	CYCGRG	1 cut(s)	755
Aor13HI	TCCGGA	2 cut(s)	90, 376
Aor51HI	AGCGCT	1 cut(s)	354
AoxI	GGCC	8 cut(s)	9, 420, 595, 813, 856, 1082, 1407, 2051
ArsI	GACNNNNNNTTYG	2 cut(s)	1446, 1478
AsiGI	ACCGGT	1 cut(s)	1400
AspLEI	GCGC	5 cut(s)	272, 355, 907, 1577, 1700
AspS9I	GGNCC	5 cut(s)	194, 421, 596, 1082, 1605
AsuC2I	CCSGG	1 cut(s)	1522
AsuHPI	GGTGA	3 cut(s)	242, 1324, 1606
AvaI	CYCGRG	1 cut(s)	755
AvaII	GGWCC	2 cut(s)	194, 1605
AxyI	CCTNAGG	2 cut(s)	120, 820
BaeGI	GKGCMC	1 cut(s)	290
BalI	TGGCCA	1 cut(s)	815
BanII	GRGCYC	5 cut(s)	642, 1196, 1420, 1680, 1801
BauI	CACGAG	2 cut(s)	199, 488
BbsI	GAAGAC	2 cut(s)	15, 1456
Bbv12I	GWGCWC	4 cut(s)	642, 1347, 1801, 1977
BccI	CCATC	5 cut(s)	805, 944, 1537, 1605, 2030
BceAI	ACGGC	4 cut(s)	283, 500, 843, 2066
BcgI	CGANNNNNNTGC	2 cut(s)	1340, 1374
BciT130I	CCWGG	6 cut(s)	134, 431, 924, 1336, 1651, 1671
BcnI	CCSGG	1 cut(s)	1522
BcoDI	GTCTC	7 cut(s)	359, 722, 845, 1016, 1225, 1231, 2197
BfaI	CTAG	3 cut(s)	413, 515, 948
BfmI	CTRYAG	2 cut(s)	683, 2145
BfoI	RGCGCY	1 cut(s)	356
BglI	GCCNNNNNGGC	1 cut(s)	1415
BlpI	GCTNAGC	2 cut(s)	401, 1190
Bme1390I	CCNGG	7 cut(s)	134, 431, 924, 1336, 1522, 1651, 1671
Bme18I	GGWCC	2 cut(s)	194, 1605
BmeRI	GACNNNNNGTC	1 cut(s)	1427
BmeT110I	CYCGRG	1 cut(s)	755
BmgBI	CACGTC	2 cut(s)	1006, 1354
BmgT120I	GGNCC	5 cut(s)	194, 421, 596, 1082, 1605
BmiI	GGNNCC	5 cut(s)	196, 423, 446, 598, 839
BmrFI	CCNGG	7 cut(s)	134, 431, 924, 1336, 1522, 1651, 1671
BmrI	ACTGGG	1 cut(s)	1435
BmsI	GCATC	8 cut(s)	107, 943, 953, 1116, 1305, 1370, 1595, 1771
BmuI	ACTGGG	1 cut(s)	1435
BpiI	GAAGAC	2 cut(s)	15, 1456
BplI	GAGNNNNNCTC	4 cut(s)	1295, 1327, 2088, 2120
BpmI	CTGGAG	3 cut(s)	42, 788, 1713
Bpu1102I	GCTNAGC	2 cut(s)	401, 1190
BpuEI	CTTGAG	2 cut(s)	488, 872
BpuMI	CCSGG	1 cut(s)	1522
BsaBI	GATNNNNATC	2 cut(s)	159, 208
BsaHI	GRCGYC	2 cut(s)	744, 1218
BsaI	GGTCTC	1 cut(s)	1231
BsaJI	CCNNGG	8 cut(s)	133, 561, 1230, 1326, 1335, 1680, 1827, 2092
BsaWI	WCCGGW	5 cut(s)	90, 376, 1141, 1289, 1400
Bsc4I	CCNNNNNNNGG	5 cut(s)	124, 430, 505, 587, 811
Bse118I	RCCGGY	2 cut(s)	1182, 1400
Bse1I	ACTGG	4 cut(s)	859, 1430, 1630, 2061
Bse21I	CCTNAGG	2 cut(s)	120, 820
Bse3DI	GCAATG	2 cut(s)	1447, 1578
Bse8I	GATNNNNATC	2 cut(s)	159, 208
BseAI	TCCGGA	2 cut(s)	90, 376
BseBI	CCWGG	6 cut(s)	134, 431, 924, 1336, 1651, 1671
BseDI	CCNNGG	8 cut(s)	133, 561, 1230, 1326, 1335, 1680, 1827, 2092
BseGI	GGATG	5 cut(s)	98, 373, 1361, 1786, 1998
BseJI	GATNNNNATC	2 cut(s)	159, 208
BseLI	CCNNNNNNNGG	5 cut(s)	124, 430, 505, 587, 811
BseMI	GCAATG	2 cut(s)	1447, 1578
BseMII	CTCAG	9 cut(s)	111, 204, 392, 834, 1181, 1188, 1562, 1863, 2208
BseNI	ACTGG	4 cut(s)	859, 1430, 1630, 2061
BseRI	GAGGAG	7 cut(s)	43, 137, 230, 263, 266, 275, 606
BseSI	GKGCMC	1 cut(s)	290
BseYI	CCCAGC	1 cut(s)	80
BsgI	GTGCAG	1 cut(s)	675
Bsh1236I	CGCG	2 cut(s)	1575, 1979
Bsh1285I	CGRYCG	2 cut(s)	1059, 1146
BshFI	GGCC	8 cut(s)	11, 422, 597, 815, 858, 1084, 1409, 2053
BshTI	ACCGGT	1 cut(s)	1400
BsiEI	CGRYCG	2 cut(s)	1059, 1146
BsiHKAI	GWGCWC	4 cut(s)	642, 1347, 1801, 1977
BsiHKCI	CYCGRG	1 cut(s)	755
BsiSI	CCGG	9 cut(s)	91, 105, 377, 1069, 1142, 1183, 1290, 1401, 1521
BslFI	GGGAC	6 cut(s)	748, 1023, 1133, 1469, 1845, 1995
BslI	CCNNNNNNNGG	5 cut(s)	124, 430, 505, 587, 811
BsmAI	GTCTC	7 cut(s)	359, 722, 845, 1016, 1225, 1231, 2197
BsmBI	CGTCTC	3 cut(s)	722, 1225, 2197
BsmFI	GGGAC	6 cut(s)	748, 1023, 1133, 1469, 1845, 1995
BsmI	GAATGC	1 cut(s)	100
BsnI	GGCC	8 cut(s)	11, 422, 597, 815, 858, 1084, 1409, 2053
Bso31I	GGTCTC	1 cut(s)	1231
BsoBI	CYCGRG	1 cut(s)	755
Bsp1286I	GDGCHC	8 cut(s)	290, 642, 1196, 1347, 1420, 1680, 1801, 1977
Bsp13I	TCCGGA	2 cut(s)	90, 376
Bsp1720I	GCTNAGC	2 cut(s)	401, 1190
BspANI	GGCC	8 cut(s)	11, 422, 597, 815, 858, 1084, 1409, 2053
BspCNI	CTCAG	9 cut(s)	112, 203, 393, 833, 1182, 1189, 1561, 1862, 2207
BspEI	TCCGGA	2 cut(s)	90, 376
BspFNI	CGCG	2 cut(s)	1575, 1979
BspHI	TCATGA	1 cut(s)	1663
BspLI	GGNNCC	5 cut(s)	196, 423, 446, 598, 839
BspMAI	CTGCAG	2 cut(s)	687, 2149
BspPI	GGATC	6 cut(s)	168, 198, 243, 1100, 1661, 1982
BspQI	GCTCTTC	1 cut(s)	1740
BspTNI	GGTCTC	1 cut(s)	1231
BsrBI	CCGCTC	1 cut(s)	1386
BsrDI	GCAATG	2 cut(s)	1447, 1578
BsrFI	RCCGGY	2 cut(s)	1182, 1400
BsrI	ACTGG	4 cut(s)	859, 1430, 1630, 2061
BssAI	RCCGGY	2 cut(s)	1182, 1400
BssECI	CCNNGG	8 cut(s)	133, 561, 1230, 1326, 1335, 1680, 1827, 2092
BssNAI	GTATAC	1 cut(s)	1939
BssNI	GRCGYC	2 cut(s)	744, 1218
BssSI	CACGAG	2 cut(s)	199, 488
BssT1I	CCWWGG	4 cut(s)	561, 1326, 1827, 2092
Bst1107I	GTATAC	1 cut(s)	1939
Bst2BI	CACGAG	2 cut(s)	199, 488
Bst2UI	CCWGG	6 cut(s)	134, 431, 924, 1336, 1651, 1671
Bst4CI	ACNGT	6 cut(s)	169, 716, 1057, 1319, 1369, 1867
Bst6I	CTCTTC	7 cut(s)	136, 252, 919, 1269, 1385, 1740, 1745
BstACI	GRCGYC	2 cut(s)	744, 1218
BstC8I	GCNNGC	8 cut(s)	407, 420, 687, 909, 1033, 1184, 1676, 1977
BstDSI	CCRYGG	2 cut(s)	1230, 1680
BstEII	GGTNACC	2 cut(s)	1330, 1716
BstENI	CCTNNNNNAGG	1 cut(s)	503
BstF5I	GGATG	5 cut(s)	98, 373, 1361, 1786, 1998
BstFNI	CGCG	2 cut(s)	1575, 1979
BstH2I	RGCGCY	1 cut(s)	356
BstHHI	GCGC	5 cut(s)	272, 355, 907, 1577, 1700
BstMAI	GTCTC	7 cut(s)	359, 722, 845, 1016, 1225, 1231, 2197
BstMCI	CGRYCG	2 cut(s)	1059, 1146
BstMWI	GCNNNNNNNGC	9 cut(s)	394, 406, 415, 585, 594, 646, 1415, 1572, 1583
BstNI	CCWGG	6 cut(s)	134, 431, 924, 1336, 1651, 1671
BstNSI	RCATGY	3 cut(s)	22, 1035, 1639
BstPI	GGTNACC	2 cut(s)	1330, 1716
BstSCI	CCNGG	7 cut(s)	132, 429, 922, 1334, 1520, 1649, 1669
BstSFI	CTRYAG	2 cut(s)	683, 2145
BstSLI	GKGCMC	1 cut(s)	290
BstUI	CGCG	2 cut(s)	1575, 1979
BstV2I	GAAGAC	2 cut(s)	15, 1456
BstX2I	RGATCY	1 cut(s)	203
BstYI	RGATCY	1 cut(s)	203
BstZ17I	GTATAC	1 cut(s)	1939
Bsu36I	CCTNAGG	2 cut(s)	120, 820
BsuRI	GGCC	8 cut(s)	11, 422, 597, 815, 858, 1084, 1409, 2053
BtgI	CCRYGG	2 cut(s)	1230, 1680
BtrI	CACGTC	2 cut(s)	1006, 1354
BtsCI	GGATG	5 cut(s)	98, 373, 1361, 1786, 1998
BtsIMutI	CAGTG	5 cut(s)	165, 1423, 1857, 1872, 2054
Cac8I	GCNNGC	8 cut(s)	407, 420, 687, 909, 1033, 1184, 1676, 1977
CaiI	CAGNNNCTG	1 cut(s)	400
CciI	TCATGA	1 cut(s)	1663
CfoI	GCGC	5 cut(s)	272, 355, 907, 1577, 1700
Cfr10I	RCCGGY	2 cut(s)	1182, 1400
Cfr13I	GGNCC	5 cut(s)	194, 421, 596, 1082, 1605
CseI	GACGC	3 cut(s)	675, 733, 983
Csp6I	GTAC	2 cut(s)	883, 1165
CspAI	ACCGGT	1 cut(s)	1400
CviQI	GTAC	2 cut(s)	883, 1165
DrdI	GACNNNNNNGTC	1 cut(s)	1223
DriI	GACNNNNNGTC	1 cut(s)	1427
DseDI	GACNNNNNNGTC	1 cut(s)	1223
EaeI	YGGCCR	4 cut(s)	9, 813, 856, 2051
Eam1104I	CTCTTC	7 cut(s)	136, 252, 919, 1269, 1385, 1740, 1745
Eam1105I	GACNNNNNGTC	1 cut(s)	1427
EarI	CTCTTC	7 cut(s)	136, 252, 919, 1269, 1385, 1740, 1745
EciI	GGCGGA	1 cut(s)	524
Ecl136II	GAGCTC	2 cut(s)	640, 1799
Eco130I	CCWWGG	4 cut(s)	561, 1326, 1827, 2092
Eco24I	GRGCYC	5 cut(s)	642, 1196, 1420, 1680, 1801
Eco31I	GGTCTC	1 cut(s)	1231
Eco47I	GGWCC	2 cut(s)	194, 1605
Eco47III	AGCGCT	1 cut(s)	354
Eco53kI	GAGCTC	2 cut(s)	640, 1799
Eco57I	CTGAAG	2 cut(s)	1424, 1559
Eco81I	CCTNAGG	2 cut(s)	120, 820
Eco88I	CYCGRG	1 cut(s)	755
Eco91I	GGTNACC	2 cut(s)	1330, 1716
EcoICRI	GAGCTC	2 cut(s)	640, 1799
EcoNI	CCTNNNNNAGG	1 cut(s)	503
EcoO109I	RGGNCCY	3 cut(s)	194, 596, 1082
EcoO65I	GGTNACC	2 cut(s)	1330, 1716
EcoRII	CCWGG	6 cut(s)	132, 429, 922, 1334, 1649, 1669
EcoT14I	CCWWGG	4 cut(s)	561, 1326, 1827, 2092
EcoT22I	ATGCAT	1 cut(s)	100
EcoT38I	GRGCYC	5 cut(s)	642, 1196, 1420, 1680, 1801
ErhI	CCWWGG	4 cut(s)	561, 1326, 1827, 2092
Esp3I	CGTCTC	3 cut(s)	722, 1225, 2197
FaqI	GGGAC	6 cut(s)	748, 1023, 1133, 1469, 1845, 1995
FauI	CCCGC	3 cut(s)	949, 1632, 1972
FauNDI	CATATG	1 cut(s)	1889
FblI	GTMKAC	4 cut(s)	15, 1938, 2069, 2224
FokI	GGATG	5 cut(s)	85, 360, 1348, 1793, 1985
FriOI	GRGCYC	5 cut(s)	642, 1196, 1420, 1680, 1801
FspBI	CTAG	3 cut(s)	413, 515, 948
GlaI	GCGC	5 cut(s)	271, 354, 906, 1576, 1699
GsaI	CCCAGC	1 cut(s)	84
GsuI	CTGGAG	3 cut(s)	42, 788, 1713
HaeII	RGCGCY	1 cut(s)	356
HaeIII	GGCC	8 cut(s)	11, 422, 597, 815, 858, 1084, 1409, 2053
HapII	CCGG	9 cut(s)	91, 105, 377, 1069, 1142, 1183, 1290, 1401, 1521
HgaI	GACGC	3 cut(s)	675, 733, 983
HhaI	GCGC	5 cut(s)	272, 355, 907, 1577, 1700
Hin1I	GRCGYC	2 cut(s)	744, 1218
Hin6I	GCGC	5 cut(s)	270, 353, 905, 1575, 1698
HinP1I	GCGC	5 cut(s)	270, 353, 905, 1575, 1698
HincII	GTYRAC	3 cut(s)	16, 151, 1396
HindII	GTYRAC	3 cut(s)	16, 151, 1396
HindIII	AAGCTT	2 cut(s)	647, 1564
HinfI	GANTC	9 cut(s)	551, 865, 1496, 1686, 1925, 2019, 2045, 2165, 2174
HpaII	CCGG	9 cut(s)	91, 105, 377, 1069, 1142, 1183, 1290, 1401, 1521
HphI	GGTGA	3 cut(s)	242, 1324, 1606
Hpy166II	GTNNAC	8 cut(s)	16, 151, 1165, 1216, 1396, 1939, 2070, 2225
Hpy188I	TCNGA	8 cut(s)	214, 336, 341, 700, 1121, 1269, 1505, 1551
Hpy8I	GTNNAC	8 cut(s)	16, 151, 1165, 1216, 1396, 1939, 2070, 2225
Hpy99I	CGWCG	6 cut(s)	17, 245, 704, 1100, 1355, 1770
HpyAV	CCTTC	7 cut(s)	921, 1073, 1095, 1246, 1448, 1670, 2148
HpyCH4III	ACNGT	6 cut(s)	169, 716, 1057, 1319, 1369, 1867
HpyCH4IV	ACGT	5 cut(s)	1005, 1218, 1353, 1482, 2066
HpyF10VI	GCNNNNNNNGC	9 cut(s)	394, 406, 415, 585, 594, 646, 1415, 1572, 1583
HpySE526I	ACGT	5 cut(s)	1005, 1218, 1353, 1482, 2066
Hsp92I	GRCGYC	2 cut(s)	744, 1218
HspAI	GCGC	5 cut(s)	270, 353, 905, 1575, 1698
Kpn2I	TCCGGA	2 cut(s)	90, 376
KroI	GCCGGC	1 cut(s)	1182
KroNI	GCCGGC	1 cut(s)	1184
LguI	GCTCTTC	1 cut(s)	1740
LmnI	GCTCC	8 cut(s)	701, 843, 1342, 1391, 1449, 1796, 1948, 2109
LweI	GCATC	8 cut(s)	107, 943, 953, 1116, 1305, 1370, 1595, 1771
MaeI	CTAG	3 cut(s)	413, 515, 948
MaeII	ACGT	5 cut(s)	1005, 1218, 1353, 1482, 2066
MaeIII	GTNAC	8 cut(s)	320, 1319, 1330, 1507, 1716, 2046, 2179, 2197
MbiI	CCGCTC	1 cut(s)	1386
MflI	RGATCY	1 cut(s)	203
MhlI	GDGCHC	8 cut(s)	290, 642, 1196, 1347, 1420, 1680, 1801, 1977
MlsI	TGGCCA	1 cut(s)	815
MluCI	AATT	1 cut(s)	568
MluNI	TGGCCA	1 cut(s)	815
MlyI	GAGTC	6 cut(s)	560, 1490, 1695, 1934, 2054, 2174
MmeI	TCCRAC	2 cut(s)	723, 1338
Mox20I	TGGCCA	1 cut(s)	815
Mph1103I	ATGCAT	1 cut(s)	100
MroI	TCCGGA	2 cut(s)	90, 376
MroNI	GCCGGC	1 cut(s)	1182
MscI	TGGCCA	1 cut(s)	815
MseI	TTAA	1 cut(s)	2214
MslI	CAYNNNNRTG	5 cut(s)	243, 1004, 1030, 1337, 1892
Msp20I	TGGCCA	1 cut(s)	815
MspA1I	CMGCKG	6 cut(s)	275, 400, 1111, 1132, 1189, 1969
MspI	CCGG	9 cut(s)	91, 105, 377, 1069, 1142, 1183, 1290, 1401, 1521
MspR9I	CCNGG	7 cut(s)	134, 431, 924, 1336, 1522, 1651, 1671
Mva1269I	GAATGC	1 cut(s)	100
MvaI	CCWGG	6 cut(s)	134, 431, 924, 1336, 1651, 1671
MvnI	CGCG	2 cut(s)	1575, 1979
MwoI	GCNNNNNNNGC	9 cut(s)	394, 406, 415, 585, 594, 646, 1415, 1572, 1583
NaeI	GCCGGC	1 cut(s)	1184
NciI	CCSGG	1 cut(s)	1522
NdeI	CATATG	1 cut(s)	1889
NgoMIV	GCCGGC	1 cut(s)	1182
NlaIV	GGNNCC	5 cut(s)	196, 423, 446, 598, 839
NmeAIII	GCCGAG	3 cut(s)	661, 699, 799
NmuCI	GTSAC	6 cut(s)	320, 1319, 1330, 2046, 2179, 2197
NsiI	ATGCAT	1 cut(s)	100
NspI	RCATGY	3 cut(s)	22, 1035, 1639
OliI	CACNNNNGTG	1 cut(s)	1337
PaeI	GCATGC	1 cut(s)	1035
PaeR7I	CTCGAG	1 cut(s)	755
PagI	TCATGA	1 cut(s)	1663
PciI	ACATGT	1 cut(s)	18
PciSI	GCTCTTC	1 cut(s)	1740
PcsI	WCGNNNNNNNCGW	1 cut(s)	726
PctI	GAATGC	1 cut(s)	100
PdiI	GCCGGC	1 cut(s)	1184
PfeI	GAWTC	3 cut(s)	865, 2019, 2174
PflMI	CCANNNNNTGG	1 cut(s)	811
PfoI	TCCNGGA	2 cut(s)	922, 1649
PinAI	ACCGGT	1 cut(s)	1400
PleI	GAGTC	6 cut(s)	559, 1490, 1694, 1933, 2053, 2173
PpsI	GAGTC	6 cut(s)	559, 1490, 1694, 1933, 2053, 2173
PpuMI	RGGWCCY	1 cut(s)	194
PscI	ACATGT	1 cut(s)	18
Psp124BI	GAGCTC	2 cut(s)	642, 1801
Psp5II	RGGWCCY	1 cut(s)	194
Psp6I	CCWGG	6 cut(s)	132, 429, 922, 1334, 1649, 1669
PspEI	GGTNACC	2 cut(s)	1330, 1716
PspFI	CCCAGC	1 cut(s)	80
PspGI	CCWGG	6 cut(s)	132, 429, 922, 1334, 1649, 1669
PspN4I	GGNNCC	5 cut(s)	196, 423, 446, 598, 839
PspPI	GGNCC	5 cut(s)	194, 421, 596, 1082, 1605
PspPPI	RGGWCCY	1 cut(s)	194
PstI	CTGCAG	2 cut(s)	687, 2149
PstNI	CAGNNNCTG	1 cut(s)	400
PsuI	RGATCY	1 cut(s)	203
PvuII	CAGCTG	6 cut(s)	275, 400, 1111, 1132, 1189, 1969
RsaI	GTAC	2 cut(s)	884, 1166
RsaNI	GTAC	2 cut(s)	883, 1165
RseI	CAYNNNNRTG	5 cut(s)	243, 1004, 1030, 1337, 1892
SacI	GAGCTC	2 cut(s)	642, 1801
SalI	GTCGAC	1 cut(s)	14
SapI	GCTCTTC	1 cut(s)	1740
SaqAI	TTAA	1 cut(s)	2214
Sau96I	GGNCC	5 cut(s)	194, 421, 596, 1082, 1605
SbfI	CCTGCAGG	1 cut(s)	687
SchI	GAGTC	6 cut(s)	560, 1490, 1695, 1934, 2054, 2174
ScrFI	CCNGG	7 cut(s)	134, 431, 924, 1336, 1522, 1651, 1671
SdaI	CCTGCAGG	1 cut(s)	687
SduI	GDGCHC	8 cut(s)	290, 642, 1196, 1347, 1420, 1680, 1801, 1977
SfaNI	GCATC	8 cut(s)	107, 943, 953, 1116, 1305, 1370, 1595, 1771
SfcI	CTRYAG	2 cut(s)	683, 2145
Sfr274I	CTCGAG	1 cut(s)	755
SinI	GGWCC	2 cut(s)	194, 1605
SlaI	CTCGAG	1 cut(s)	755
SmiMI	CAYNNNNRTG	5 cut(s)	243, 1004, 1030, 1337, 1892
SmlI	CTYRAG	3 cut(s)	503, 755, 887
SmoI	CTYRAG	3 cut(s)	503, 755, 887
SphI	GCATGC	1 cut(s)	1035
Sse8387I	CCTGCAGG	1 cut(s)	687
Sse9I	AATT	1 cut(s)	568
SspMI	CTAG	3 cut(s)	413, 515, 948
SstI	GAGCTC	2 cut(s)	642, 1801
StyD4I	CCNGG	7 cut(s)	132, 429, 922, 1334, 1520, 1649, 1669
StyI	CCWWGG	4 cut(s)	561, 1326, 1827, 2092
TaaI	ACNGT	6 cut(s)	169, 716, 1057, 1319, 1369, 1867
TaiI	ACGT	5 cut(s)	1008, 1221, 1356, 1485, 2069
TaqII	GACCGA	1 cut(s)	1213
TasI	AATT	1 cut(s)	568
TatI	WGTACW	1 cut(s)	1164
TauI	GCSGC	1 cut(s)	459
TfiI	GAWTC	3 cut(s)	865, 2019, 2174
Tru1I	TTAA	1 cut(s)	2214
Tru9I	TTAA	1 cut(s)	2214
TscAI	CASTG	5 cut(s)	172, 1430, 1857, 1872, 2061
TseFI	GTSAC	6 cut(s)	320, 1319, 1330, 2046, 2179, 2197
Tsp45I	GTSAC	6 cut(s)	320, 1319, 1330, 2046, 2179, 2197
TspDTI	ATGAA	5 cut(s)	681, 988, 1459, 1652, 1773
TspGWI	ACGGA	5 cut(s)	1105, 1219, 1262, 1809, 2167
TspRI	CASTG	5 cut(s)	172, 1430, 1857, 1872, 2061
Van91I	CCANNNNNTGG	1 cut(s)	811
VpaK11BI	GGWCC	2 cut(s)	194, 1605
XagI	CCTNNNNNAGG	1 cut(s)	503
XbaI	TCTAGA	1 cut(s)	947
XceI	RCATGY	3 cut(s)	22, 1035, 1639
XhoI	CTCGAG	1 cut(s)	755
XmiI	GTMKAC	4 cut(s)	15, 1938, 2069, 2224
XspI	CTAG	3 cut(s)	413, 515, 948
ZraI	GACGTC	1 cut(s)	1219
Zsp2I	ATGCAT	1 cut(s)	100

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.