Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0005711

Physical Location & Seq

Genomic Coordinates Reverse (-)

56582286 .. 56586614

Gene Structure 4329 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ50956

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2292 bp

ATGGGCGTCGACATGTCCAACAATCCACCAACTTCTCGCACCAAAGACTTCTTTGCCTCCCCTGCTCTCTCCCTCAGCCTCGCTGGGATTTTTCGAGATGCCGGGACTCCGGCGGAGACGGCGGCTAATAGGGAGGGGGAAGAAGGGGATGAAGGGAGCGTAGGCGGCCGCCGGAGGTCGAGAGAAGACACGGCTGAGATTAGCAGCGAGAACTCTGGTCCAGCGAGGTCGAGATCAGCGGAGGACATTGATTTTGATGCAGAGTTAGGAGAGCCAGATGAAGATGATGGAGATGGAGACAACAAGAACAAGAAGAAAAAGAGAAAAAAGTACCATAGGCACACCACTGAGCAAATCCGAGAAATGGAAGCGCTGTTCAAGGAGTCACCCCATCCAGATGAGAAGCAAAGACAGCAGCTGAGCAAGCAGTTAGGCCTTGCTCCAAGGCAAGTCAAGTTTTGGTTCCAAAATCGCCGTACCCAAATCAAGGCTATACAAGAGCGCCATGAAAACTCGTTGTTGAAAGGAGAAATGGAGAAACTCCGAGACGAGAATAAGGCGATGAGGGAGCAAATAAACAAAGCTTGTTGCCCCAACTGTGGCAGTGCCACGACTAGCAGAGATGCCACCTTGACAACCGAGGAGCAACAACTCCGAATCGAAAATGCGAGACTCAAATCCGAGGTTGAAAAACTTCGAGCAGCTCTAGTAAAATACCCTATTGGGACATCCTCTCCTTCCAGCTCTACTGGCCAGGACCAGGAGAGCAGAAGTTCTTTGGACTTTTACACAGGAATTTTCGGTCTTGAGAAGTCGAGGATTATGGAGATAGTTAACCAAGCAATGGAGGAGCTTCAAAAGATGGCCACAGCTGGAGAACCACTCTGGGTTCGAAGTGTTGAGACTGGCCGTGAAATACTTAATTATGATGAGTACATCAAAGAGTTCAACATTGAAATTCCAGCCAGTGGGCGGCCAAAGAGATCCATTGAGGCCTCAAGGGACACGGGTGTGGTTTTTGTAGATCTCCCAAGACTAGTTCAGAGCTTCATGGATGTGAATCAATGGAAGGAAATGTTTCCATCTATGATCTCAAAGGCTGCCACTGTTGATGTTATTAGCAATGGCGAAGGAGACAATAGAAATGGTGCTGTACAACTGATGTTTGCAGAGCTGCAAATGCTTACACCTTTGGTGCCCACCAGAGAAGTTTACTTCGTTAGATGTAGCAAGCAACTGAGTCCTGAACAGTGGGCTGTTGTTGATGTTTCAATTGACAAAGTTGAAGATAACATTGATGCGTCCTTGGTGAAATGCAGAAAACGTCCCTCTGGTTGCATCATCGAAGACAAATCAAACGGCCATTGCAAGGTAATCTGGGTGGAGCACTTAGAGTGCCAGAAAAGCACAGTTCAGACCATGTACCGGAGTATAGTCAACAGTGGTCTGGCATTTGGTGCAAGACATTGGGTAGCGACGCTGCAACTCCAATGCGAAAGGCTTGTTTTCTTCATGGCAACCAATGTTCCGATGAAGGATTCAACTGGAGTAGCCACATTGGCTGGGAGAAAAAGCATTTTGAAAATGGCACAAAGAATGACATCAAGTTTTTGTCGCGCAATTGGAGCATCAAGCTACCATACCTGGACCAAGATCTCAAGCAAAACAGGTGATGACATCAGGATTTCCTCCAGGAAGAACTTGAACGATCCGGGAGAGCCTCTTGGTGTGATCTTGTGTGCAGTTTCTTCAGTATGGTTGCCTGTCTCTCCTTATGCCCTCTTCGATTTTTTGAGAGATGAGAATCGCAGGAACGAGTGGGACATTATGTTAAATGGGGGTCCGGCGCAAACAATTGCAAACCTATCCAAAGGACAAGATCGTGGCAATGCTGTTACTATTCAAACAATGAAATCAAAAGAGAACAGCATGTGGATTCTACAAGATAGCTGCATAAATGCTTACGAGTCCATGGTGGTTTACGCTCCGGTGGATATCACTGGCATGCAGTCTGTGATGACAGGATGCGACTCGAGCAACATGGCCGTATTGTCTTCAGGGTTCTCAATTCTTCCAGATGGGTTGGAGTCGAGGCCTATGGTCATCACTTCCAGGCAAGAAGATCGAGGCAGTGACAGTGAAGGAGGAACTTTGTTAACCGTAGCATTTCAAGTCTTGACTAATACCTCTCCTACTGCCAAACTAACTGTGGAGTCTGTAGAGTCTGCCAACACTCTTATATCATGTACTTTGAGAAATATTAAGACGAGCTTGCAGTGTGAGGATGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

763

Amino Acids

84.83

Weight (kDa)

5.73

Isoelectric Point (pI)

55.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	108 - 163	3.6e-19	Homeodomain
START	PF01852	277 - 500	2.9e-53	START domain
PDF2_C	PF25797	519 - 760	4.1e-106	PDF2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005711)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79840 AT1G79840 AT1G79840 AT1G79840 AT1G79840 AT1G79840
fragaria_vesca	FvH4_6g31780 FvH4_6g31780 FvH4_6g31780 FvH4_6g31780 FvH4_6g31780 FvH4_6g31780
malus_domestica	MD09G1209300.v1.1 MD17G1191000.v1.1
prunus_persica	Prupe.3G067200_v2.0.a1
pyrus_communis	pycom09g12540 pycom17g19810
rosa_chinensis	RchiOBHm_Chr2g0138951
rosa_laevigata	RLG00000019771
rosa_multiflora	Rmu_sc0001376.1_g000004
rosa_roxburghii	Rroxscaffold_2G00105840
rosa_rugosa	Rorug02G0353500 Rorug02G0353600
rosa_samantha	Rh2AG403500 Rh2BG413900 Rh2CG389600 Rh2DG423700
rosa_wichuraiana	Rw2G032830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1195
AccB7I	CCANNNNNTGG	2 cut(s)	844, 968
AccI	GTMKAC	1 cut(s)	9
AccII	CGCG	1 cut(s)	1617
AciI	CCGC	6 cut(s)	113, 122, 165, 169, 239, 973
AclWI	GGATC	2 cut(s)	978, 1703
AcoI	YGGCCR	7 cut(s)	166, 751, 864, 907, 974, 1360, 2043
AcsI	RAATTY	2 cut(s)	795, 957
AcuI	CTGAAG	2 cut(s)	1734, 2040
AcyI	GRCGYC	1 cut(s)	6
AfaI	GTAC	6 cut(s)	332, 478, 935, 1155, 1424, 2248
AfeI	AGCGCT	1 cut(s)	372
AfiI	CCNNNNNNNGG	9 cut(s)	364, 487, 599, 760, 844, 968, 972, 1369, 1425
AflIII	ACRYGT	1 cut(s)	12
AhlI	ACTAGT	1 cut(s)	1036
AjnI	CCWGG	5 cut(s)	753, 759, 1643, 1691, 2111
AleI	CACNNNNGTG	1 cut(s)	1010
AloI	GAACNNNNNNTCC	2 cut(s)	359, 391
Alw21I	GWGCWC	1 cut(s)	1389
Alw26I	GTCTC	7 cut(s)	110, 291, 540, 664, 896, 1128, 1771
AlwI	GGATC	2 cut(s)	978, 1703
AlwNI	CAGNNNCTG	1 cut(s)	418
Ama87I	CYCGRG	1 cut(s)	2032
Aor51HI	AGCGCT	1 cut(s)	372
ApeKI	GCWGC	7 cut(s)	204, 415, 701, 1100, 1174, 1480, 1950
ApoI	RAATTY	2 cut(s)	795, 957
ArsI	GACNNNNNNTTYG	2 cut(s)	236, 268
Asp700I	GAANNNNTTC	2 cut(s)	693, 1077
AspLEI	GCGC	4 cut(s)	373, 504, 1619, 1849
AspS9I	GGNCC	4 cut(s)	218, 757, 1647, 1841
AsuC2I	CCSGG	2 cut(s)	103, 1713
AsuHPI	GGTGA	3 cut(s)	378, 1321, 1682
AsuII	TTCGAA	1 cut(s)	892
AvaI	CYCGRG	1 cut(s)	2032
AvaII	GGWCC	4 cut(s)	218, 757, 1647, 1841
BaeGI	GKGCMC	1 cut(s)	1200
BalI	TGGCCA	2 cut(s)	753, 866
BanI	GGYRCC	1 cut(s)	1195
BbsI	GAAGAC	3 cut(s)	192, 1353, 2046
Bbv12I	GWGCWC	1 cut(s)	1389
BbvCI	CCTCAGC	1 cut(s)	74
BbvI	GCAGC	7 cut(s)	216, 427, 713, 1087, 1161, 1467, 1937
BccI	CCATC	7 cut(s)	281, 287, 399, 856, 1090, 2072, 2279
BceAI	ACGGC	6 cut(s)	135, 207, 459, 894, 1375, 2030
BcgI	CGANNNNNNTGC	2 cut(s)	2105, 2139
BciT130I	CCWGG	5 cut(s)	755, 761, 1645, 1693, 2113
BcnI	CCSGG	2 cut(s)	103, 1713
BcoDI	GTCTC	7 cut(s)	110, 291, 540, 664, 896, 1128, 1771
BcuI	ACTAGT	1 cut(s)	1036
BfaI	CTAG	3 cut(s)	615, 707, 1037
BfmI	CTRYAG	1 cut(s)	2217
BfoI	RGCGCY	2 cut(s)	374, 505
BglI	GCCNNNNNGGC	1 cut(s)	1559
BglII	AGATCT	2 cut(s)	1024, 1653
BlpI	GCTNAGC	1 cut(s)	419
Bme1390I	CCNGG	7 cut(s)	103, 755, 761, 1645, 1693, 1713, 2113
Bme18I	GGWCC	4 cut(s)	218, 757, 1647, 1841
BmeT110I	CYCGRG	1 cut(s)	2032
BmgT120I	GGNCC	4 cut(s)	218, 757, 1647, 1841
BmiI	GGNNCC	3 cut(s)	464, 1197, 1842
BmrFI	CCNGG	7 cut(s)	103, 755, 761, 1645, 1693, 1713, 2113
BmsI	GCATC	7 cut(s)	88, 247, 613, 1288, 1347, 1637, 2015
BpiI	GAAGAC	3 cut(s)	192, 1353, 2046
BplI	GAGNNNNNCTC	2 cut(s)	867, 899
BpmI	CTGGAG	3 cut(s)	894, 1566, 1675
Bpu10I	CCTNAGC	1 cut(s)	74
Bpu1102I	GCTNAGC	1 cut(s)	419
Bpu14I	TTCGAA	1 cut(s)	892
BpuEI	CTTGAG	3 cut(s)	827, 982, 1642
BpuMI	CCSGG	2 cut(s)	103, 1713
BsaBI	GATNNNNATC	2 cut(s)	1059, 1803
BsaHI	GRCGYC	1 cut(s)	6
BsaJI	CCNNGG	5 cut(s)	443, 639, 681, 1305, 1971
BsaWI	WCCGGW	2 cut(s)	1425, 1987
BsaXI	ACNNNNNCTCC	2 cut(s)	718, 748
Bsc4I	CCNNNNNNNGG	9 cut(s)	364, 487, 599, 760, 844, 968, 972, 1369, 1425
Bse1I	ACTGG	5 cut(s)	754, 910, 966, 1549, 2005
Bse3DI	GCAATG	4 cut(s)	849, 1129, 1363, 1894
Bse8I	GATNNNNATC	2 cut(s)	1059, 1803
BseBI	CCWGG	5 cut(s)	755, 761, 1645, 1693, 2113
BseDI	CCNNGG	5 cut(s)	443, 639, 681, 1305, 1971
BseGI	GGATG	6 cut(s)	154, 391, 728, 1060, 2030, 2290
BseJI	GATNNNNATC	2 cut(s)	1059, 1803
BseLI	CCNNNNNNNGG	9 cut(s)	364, 487, 599, 760, 844, 968, 972, 1369, 1425
BseMI	GCAATG	4 cut(s)	849, 1129, 1363, 1894
BseMII	CTCAG	5 cut(s)	88, 186, 339, 410, 1229
BseNI	ACTGG	5 cut(s)	754, 910, 966, 1549, 2005
BseRI	GAGGAG	2 cut(s)	656, 863
BseSI	GKGCMC	1 cut(s)	1200
BseX3I	CGGCCG	1 cut(s)	166
BseXI	GCAGC	7 cut(s)	216, 427, 713, 1087, 1161, 1467, 1937
BseYI	CCCAGC	2 cut(s)	83, 1562
BsgI	GTGCAG	1 cut(s)	1761
Bsh1236I	CGCG	1 cut(s)	1617
Bsh1285I	CGRYCG	1 cut(s)	169
BshNI	GGYRCC	1 cut(s)	1195
BsiEI	CGRYCG	1 cut(s)	169
BsiHKAI	GWGCWC	1 cut(s)	1389
BsiHKCI	CYCGRG	1 cut(s)	2032
BsiSI	CCGG	7 cut(s)	102, 110, 172, 1426, 1712, 1844, 1988
BslFI	GGGAC	5 cut(s)	118, 739, 1016, 1311, 1835
BslI	CCNNNNNNNGG	9 cut(s)	364, 487, 599, 760, 844, 968, 972, 1369, 1425
BsmAI	GTCTC	7 cut(s)	110, 291, 540, 664, 896, 1128, 1771
BsmBI	CGTCTC	2 cut(s)	110, 540
BsmFI	GGGAC	5 cut(s)	118, 739, 1016, 1311, 1835
BsoBI	CYCGRG	1 cut(s)	2032
Bsp119I	TTCGAA	1 cut(s)	892
Bsp1286I	GDGCHC	2 cut(s)	1200, 1389
Bsp1407I	TGTACA	1 cut(s)	1153
Bsp143I	GATC	9 cut(s)	233, 983, 1024, 1089, 1653, 1708, 1731, 1879, 2122
Bsp1720I	GCTNAGC	1 cut(s)	419
Bsp19I	CCATGG	1 cut(s)	1971
BspACI	CCGC	6 cut(s)	113, 122, 165, 169, 239, 973
BspCNI	CTCAG	5 cut(s)	87, 187, 340, 411, 1230
BspFNI	CGCG	1 cut(s)	1617
BspLI	GGNNCC	3 cut(s)	464, 1197, 1842
BspPI	GGATC	2 cut(s)	978, 1703
BspT104I	TTCGAA	1 cut(s)	892
BspT107I	GGYRCC	1 cut(s)	1195
BsrDI	GCAATG	4 cut(s)	849, 1129, 1363, 1894
BsrGI	TGTACA	1 cut(s)	1153
BsrI	ACTGG	5 cut(s)	754, 910, 966, 1549, 2005
BssECI	CCNNGG	5 cut(s)	443, 639, 681, 1305, 1971
BssMI	GATC	9 cut(s)	233, 983, 1024, 1089, 1653, 1708, 1731, 1879, 2122
BssNI	GRCGYC	1 cut(s)	6
BssT1I	CCWWGG	3 cut(s)	443, 1305, 1971
Bst2UI	CCWGG	5 cut(s)	755, 761, 1645, 1693, 2113
Bst4CI	ACNGT	8 cut(s)	599, 1108, 1251, 1411, 1442, 2138, 2161, 2209
Bst6I	CTCTTC	1 cut(s)	1787
BstACI	GRCGYC	1 cut(s)	6
BstAPI	GCANNNNNTGC	1 cut(s)	1457
BstAUI	TGTACA	1 cut(s)	1153
BstBI	TTCGAA	1 cut(s)	892
BstC8I	GCNNGC	4 cut(s)	425, 1232, 2006, 2273
BstDEI	CTNAG	6 cut(s)	74, 195, 348, 419, 1238, 1390
BstDSI	CCRYGG	1 cut(s)	1971
BstF5I	GGATG	6 cut(s)	154, 391, 728, 1060, 2030, 2290
BstFNI	CGCG	1 cut(s)	1617
BstH2I	RGCGCY	2 cut(s)	374, 505
BstHHI	GCGC	4 cut(s)	373, 504, 1619, 1849
BstKTI	GATC	9 cut(s)	236, 986, 1027, 1092, 1656, 1711, 1734, 1882, 2125
BstMAI	GTCTC	7 cut(s)	110, 291, 540, 664, 896, 1128, 1771
BstMBI	GATC	9 cut(s)	233, 983, 1024, 1089, 1653, 1708, 1731, 1879, 2122
BstMCI	CGRYCG	1 cut(s)	169
BstNI	CCWGG	5 cut(s)	755, 761, 1645, 1693, 2113
BstNSI	RCATGY	3 cut(s)	16, 1933, 2008
BstSCI	CCNGG	7 cut(s)	101, 753, 759, 1643, 1691, 1711, 2111
BstSFI	CTRYAG	1 cut(s)	2217
BstSLI	GKGCMC	1 cut(s)	1200
BstUI	CGCG	1 cut(s)	1617
BstV1I	GCAGC	7 cut(s)	216, 427, 713, 1087, 1161, 1467, 1937
BstV2I	GAAGAC	3 cut(s)	192, 1353, 2046
BstX2I	RGATCY	3 cut(s)	983, 1024, 1653
BstYI	RGATCY	3 cut(s)	983, 1024, 1653
BstZI	CGGCCG	1 cut(s)	166
BtgI	CCRYGG	1 cut(s)	1971
BtgZI	GCGATG	1 cut(s)	575
BtsCI	GGATG	6 cut(s)	154, 391, 728, 1060, 2030, 2290
BtsI	GCAGTG	3 cut(s)	610, 2137, 2282
Cac8I	GCNNGC	4 cut(s)	425, 1232, 2006, 2273
CaiI	CAGNNNCTG	1 cut(s)	418
CciNI	GCGGCCGC	1 cut(s)	166
CfoI	GCGC	4 cut(s)	373, 504, 1619, 1849
Cfr13I	GGNCC	4 cut(s)	218, 757, 1647, 1841
CseI	GACGC	2 cut(s)	1290, 1486
Csp6I	GTAC	6 cut(s)	331, 477, 934, 1154, 1423, 2247
CviQI	GTAC	6 cut(s)	331, 477, 934, 1154, 1423, 2247
DdeI	CTNAG	6 cut(s)	74, 195, 348, 419, 1238, 1390
DpnI	GATC	9 cut(s)	235, 985, 1026, 1091, 1655, 1710, 1733, 1881, 2124
DpnII	GATC	9 cut(s)	233, 983, 1024, 1089, 1653, 1708, 1731, 1879, 2122
EaeI	YGGCCR	7 cut(s)	166, 751, 864, 907, 974, 1360, 2043
EagI	CGGCCG	1 cut(s)	166
Eam1104I	CTCTTC	1 cut(s)	1787
EarI	CTCTTC	1 cut(s)	1787
EciI	GGCGGA	1 cut(s)	128
EclXI	CGGCCG	1 cut(s)	166
Eco130I	CCWWGG	3 cut(s)	443, 1305, 1971
Eco147I	AGGCCT	3 cut(s)	435, 995, 2095
Eco32I	GATATC	1 cut(s)	1996
Eco47I	GGWCC	4 cut(s)	218, 757, 1647, 1841
Eco47III	AGCGCT	1 cut(s)	372
Eco52I	CGGCCG	1 cut(s)	166
Eco57I	CTGAAG	2 cut(s)	1734, 2040
Eco88I	CYCGRG	1 cut(s)	2032
EcoRII	CCWGG	5 cut(s)	753, 759, 1643, 1691, 2111
EcoRV	GATATC	1 cut(s)	1996
EcoT14I	CCWWGG	3 cut(s)	443, 1305, 1971
ErhI	CCWWGG	3 cut(s)	443, 1305, 1971
Esp3I	CGTCTC	2 cut(s)	110, 540
FalI	AAGNNNNNCTT	2 cut(s)	2255, 2287
FaqI	GGGAC	5 cut(s)	118, 739, 1016, 1311, 1835
FblI	GTMKAC	1 cut(s)	9
FokI	GGATG	5 cut(s)	161, 378, 715, 1067, 2037
FspBI	CTAG	3 cut(s)	615, 707, 1037
GlaI	GCGC	4 cut(s)	372, 503, 1618, 1848
GsaI	CCCAGC	2 cut(s)	87, 1566
GsuI	CTGGAG	3 cut(s)	894, 1566, 1675
HaeII	RGCGCY	2 cut(s)	374, 505
HapII	CCGG	7 cut(s)	102, 110, 172, 1426, 1712, 1844, 1988
HgaI	GACGC	2 cut(s)	1290, 1486
HhaI	GCGC	4 cut(s)	373, 504, 1619, 1849
Hin1I	GRCGYC	1 cut(s)	6
Hin6I	GCGC	4 cut(s)	371, 502, 1617, 1847
HinP1I	GCGC	4 cut(s)	371, 502, 1617, 1847
HincII	GTYRAC	4 cut(s)	10, 835, 1438, 2157
HindII	GTYRAC	4 cut(s)	10, 835, 1438, 2157
HindIII	AAGCTT	1 cut(s)	582
HpaI	GTTAAC	2 cut(s)	835, 2157
HpaII	CCGG	7 cut(s)	102, 110, 172, 1426, 1712, 1844, 1988
HphI	GGTGA	3 cut(s)	378, 1321, 1682
Hpy166II	GTNNAC	6 cut(s)	10, 835, 1213, 1438, 1981, 2157
Hpy188I	TCNGA	7 cut(s)	359, 545, 656, 682, 1044, 1416, 1530
Hpy188III	TCNNGA	9 cut(s)	95, 180, 231, 395, 806, 1244, 1681, 2075, 2176
Hpy8I	GTNNAC	6 cut(s)	10, 835, 1213, 1438, 1981, 2157
Hpy99I	CGWCG	2 cut(s)	11, 1480
HpyAV	CCTTC	7 cut(s)	137, 146, 747, 1063, 1124, 1528, 2135
HpyCH4III	ACNGT	8 cut(s)	599, 1108, 1251, 1411, 1442, 2138, 2161, 2209
HpyCH4IV	ACGT	1 cut(s)	1324
HpyF3I	CTNAG	6 cut(s)	74, 195, 348, 419, 1238, 1390
HpySE526I	ACGT	1 cut(s)	1324
Hsp92I	GRCGYC	1 cut(s)	6
HspAI	GCGC	4 cut(s)	371, 502, 1617, 1847
KspAI	GTTAAC	2 cut(s)	835, 2157
Kzo9I	GATC	9 cut(s)	233, 983, 1024, 1089, 1653, 1708, 1731, 1879, 2122
LmnI	GCTCC	8 cut(s)	156, 445, 568, 643, 850, 1384, 1625, 1990
Lsp1109I	GCAGC	7 cut(s)	216, 427, 713, 1087, 1161, 1467, 1937
LweI	GCATC	7 cut(s)	88, 247, 613, 1288, 1347, 1637, 2015
MaeI	CTAG	3 cut(s)	615, 707, 1037
MaeII	ACGT	1 cut(s)	1324
MaeIII	GTNAC	3 cut(s)	384, 1894, 2132
MalI	GATC	9 cut(s)	235, 985, 1026, 1091, 1655, 1710, 1733, 1881, 2124
MboI	GATC	9 cut(s)	233, 983, 1024, 1089, 1653, 1708, 1731, 1879, 2122
MfeI	CAATTG	3 cut(s)	1272, 1620, 1854
MflI	RGATCY	3 cut(s)	983, 1024, 1653
MhlI	GDGCHC	2 cut(s)	1200, 1389
MlsI	TGGCCA	2 cut(s)	753, 866
MluCI	AATT	7 cut(s)	795, 922, 957, 1272, 1620, 1854, 2067
MluNI	TGGCCA	2 cut(s)	753, 866
MlyI	GAGTC	9 cut(s)	100, 392, 666, 1249, 1976, 2024, 2096, 2222, 2231
MmeI	TCCRAC	2 cut(s)	42, 2064
Mox20I	TGGCCA	2 cut(s)	753, 866
MroXI	GAANNNNTTC	2 cut(s)	693, 1077
MscI	TGGCCA	2 cut(s)	753, 866
MseI	TTAA	5 cut(s)	834, 921, 1832, 2156, 2262
MslI	CAYNNNNRTG	4 cut(s)	396, 1010, 1055, 2003
Msp20I	TGGCCA	2 cut(s)	753, 866
MspA1I	CMGCKG	3 cut(s)	239, 418, 872
MspI	CCGG	7 cut(s)	102, 110, 172, 1426, 1712, 1844, 1988
MspR9I	CCNGG	7 cut(s)	103, 755, 761, 1645, 1693, 1713, 2113
MunI	CAATTG	3 cut(s)	1272, 1620, 1854
MvaI	CCWGG	5 cut(s)	755, 761, 1645, 1693, 2113
MvnI	CGCG	1 cut(s)	1617
NciI	CCSGG	2 cut(s)	103, 1713
NcoI	CCATGG	1 cut(s)	1971
NdeII	GATC	9 cut(s)	233, 983, 1024, 1089, 1653, 1708, 1731, 1879, 2122
NlaIV	GGNNCC	3 cut(s)	464, 1197, 1842
NmuCI	GTSAC	2 cut(s)	384, 2132
NotI	GCGGCCGC	1 cut(s)	166
NspI	RCATGY	3 cut(s)	16, 1933, 2008
NspV	TTCGAA	1 cut(s)	892
OliI	CACNNNNGTG	1 cut(s)	1010
PaeI	GCATGC	1 cut(s)	2008
PaeR7I	CTCGAG	1 cut(s)	2032
PceI	AGGCCT	3 cut(s)	435, 995, 2095
PciI	ACATGT	1 cut(s)	12
PdmI	GAANNNNTTC	2 cut(s)	693, 1077
PfeI	GAWTC	5 cut(s)	657, 1060, 1538, 1804, 1936
PflMI	CCANNNNNTGG	2 cut(s)	844, 968
PfoI	TCCNGGA	2 cut(s)	1691, 1711
PleI	GAGTC	9 cut(s)	100, 391, 666, 1248, 1975, 2024, 2095, 2221, 2230
PpsI	GAGTC	9 cut(s)	100, 391, 666, 1248, 1975, 2024, 2095, 2221, 2230
PscI	ACATGT	1 cut(s)	12
Psp6I	CCWGG	5 cut(s)	753, 759, 1643, 1691, 2111
PspFI	CCCAGC	2 cut(s)	83, 1562
PspGI	CCWGG	5 cut(s)	753, 759, 1643, 1691, 2111
PspN4I	GGNNCC	3 cut(s)	464, 1197, 1842
PspPI	GGNCC	4 cut(s)	218, 757, 1647, 1841
PspXI	VCTCGAGB	1 cut(s)	2032
PstNI	CAGNNNCTG	1 cut(s)	418
PsuI	RGATCY	3 cut(s)	983, 1024, 1653
PvuII	CAGCTG	2 cut(s)	418, 872
RsaI	GTAC	6 cut(s)	332, 478, 935, 1155, 1424, 2248
RsaNI	GTAC	6 cut(s)	331, 477, 934, 1154, 1423, 2247
RseI	CAYNNNNRTG	4 cut(s)	396, 1010, 1055, 2003
SalI	GTCGAC	1 cut(s)	8
SaqAI	TTAA	5 cut(s)	834, 921, 1832, 2156, 2262
Sau3AI	GATC	9 cut(s)	233, 983, 1024, 1089, 1653, 1708, 1731, 1879, 2122
Sau96I	GGNCC	4 cut(s)	218, 757, 1647, 1841
SchI	GAGTC	9 cut(s)	100, 392, 666, 1249, 1976, 2024, 2096, 2222, 2231
ScrFI	CCNGG	7 cut(s)	103, 755, 761, 1645, 1693, 1713, 2113
SduI	GDGCHC	2 cut(s)	1200, 1389
SfaNI	GCATC	7 cut(s)	88, 247, 613, 1288, 1347, 1637, 2015
SfcI	CTRYAG	1 cut(s)	2217
Sfr274I	CTCGAG	1 cut(s)	2032
SfuI	TTCGAA	1 cut(s)	892
SinI	GGWCC	4 cut(s)	218, 757, 1647, 1841
SlaI	CTCGAG	1 cut(s)	2032
SmiMI	CAYNNNNRTG	4 cut(s)	396, 1010, 1055, 2003
SmlI	CTYRAG	4 cut(s)	806, 997, 1657, 2032
SmoI	CTYRAG	4 cut(s)	806, 997, 1657, 2032
SpeI	ACTAGT	1 cut(s)	1036
SphI	GCATGC	1 cut(s)	2008
Sse9I	AATT	7 cut(s)	795, 922, 957, 1272, 1620, 1854, 2067
SseBI	AGGCCT	3 cut(s)	435, 995, 2095
SsiI	CCGC	6 cut(s)	113, 122, 165, 169, 239, 973
SspI	AATATT	1 cut(s)	2260
SspMI	CTAG	3 cut(s)	615, 707, 1037
StuI	AGGCCT	3 cut(s)	435, 995, 2095
StyD4I	CCNGG	7 cut(s)	101, 753, 759, 1643, 1691, 1711, 2111
StyI	CCWWGG	3 cut(s)	443, 1305, 1971
TaaI	ACNGT	8 cut(s)	599, 1108, 1251, 1411, 1442, 2138, 2161, 2209
TaiI	ACGT	1 cut(s)	1327
TaqII	GACCGA	1 cut(s)	791
TasI	AATT	7 cut(s)	795, 922, 957, 1272, 1620, 1854, 2067
TatI	WGTACW	3 cut(s)	933, 1153, 2246
TauI	GCSGC	4 cut(s)	125, 168, 171, 976
TfiI	GAWTC	5 cut(s)	657, 1060, 1538, 1804, 1936
Tru1I	TTAA	5 cut(s)	834, 921, 1832, 2156, 2262
Tru9I	TTAA	5 cut(s)	834, 921, 1832, 2156, 2262
TseFI	GTSAC	2 cut(s)	384, 2132
TseI	GCWGC	7 cut(s)	204, 415, 701, 1100, 1174, 1480, 1950
Tsp45I	GTSAC	2 cut(s)	384, 2132
TspDTI	ATGAA	7 cut(s)	165, 294, 522, 1039, 1501, 1547, 1925
Van91I	CCANNNNNTGG	2 cut(s)	844, 968
VpaK11BI	GGWCC	4 cut(s)	218, 757, 1647, 1841
XapI	RAATTY	2 cut(s)	795, 957
XceI	RCATGY	3 cut(s)	16, 1933, 2008
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2206
XhoI	CTCGAG	1 cut(s)	2032
XmiI	GTMKAC	1 cut(s)	9
XmnI	GAANNNNTTC	2 cut(s)	693, 1077
XspI	CTAG	3 cut(s)	615, 707, 1037

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.