Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0005711

Physical Location & Seq

Genomic Coordinates Reverse (-)

24875068 .. 24879650

Gene Structure 4583 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g31780.t5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2220 bp

ATGGGCGTCGTCGACATGTCCAACAATCCACCAACTTCTCGCACCAAAGACTTCTTCGCCTCCCCTGCTCTCTCCCTCAGCCTCGCTGGGATTTTCCGAGATGCCGGGACTCCGGCGGAGACGGCGGCTAATAGGGAGGGGGACGAAGGCGATGAAGGGAGCGTAGGCGGTCGCCGGAGGTCGAGAGAAGACACGGCCGAGATCAGCAGCGAGAACTCGGGCCCGGCGAGGTCGAGATCAGCGGAAGACATTGATTTTGATGCCGAGTTGGGAGAGCAAGATGAGGATGATGGTGATGGAGACAACAAGAACAAGAAGAAGAAGAGGAAAAAGTATCACAGACACACCACTGAGCAAATCCGAGAAATGGAAGCGCTGTTCAAGGAGTCACCCCATCCAGATGAGAAGCAAAGACAGCAGCTGAGCAAGCAGCTAGGCCTTGCTCCAAGGCAAGTCAAGTTTTGGTTCCAAAATCGCCGTACCCAAATCAAGGCTATTCAAGAGCGCCATGAAAACTCATTGTTGAAAGGAGAAATGGAGAAACTCCGAGATGAGAATAAGGCAATGAGGGAGCAAATTAACAAATCTTGTTGCCCCAACTGTGGCAGTGCCACCACTAGCAGAGATGCCACCTTGACTACCGAGGAGCAACAACTCCGAATTGAAAATGCCAGGCTCAAATCCGAGGTTGAAAAACTCCGAGCTGCTCTAGTAAAATACCCTCTTGGGACATCCTCTCCTTCCAGTTCTACTGGGCAGGACCAGGAGAACAGAAGCTCATTGGACTTCTACACCGGTATTTTTGGTCTTGAGAAGTCTAGGATTATGGAGATAGTTAACCAAGCAATGGAGGAGCTTCAAAAGATGGCTACAGCTGGAGAACCACTCTGGGTCCGAAGTGTTGAGACTGGCCGTGAAATACTTAACTATGATGAGTACATCAAAGAGTTCAACATTGAAGTTCCAGCCACTGGGCGGCCAAAGAGATCCATTGAGGCCTCAAGGGAGACGGGTGTTGTTTTTGTAGATCTCCCAAAACTAGTTCAGAGTTTCATGGATGTGAATCAATGGAAGGAAATGTTTCCATCTATTATCTCAAAGGCTGCCACTGTTGATGTTATTAACAATGGCGAAGGAGACAATAGAAATGGTGCTGTACAATTGATGTTTGCAGAGCTGCAAATGCTTACACCTTTAGTGCCCACCAGAGAAGTTTACTTCGTTAGATGTAGCAAGCAACTGAGTGCTGAACAGTGGGCTGTCGTTGATGTTTCCATTGACAAAGTTGAAGATAACATTGATGCATCCTTGGTGAAATGCAGAAAACGTCCCTCGGGTTGCATCATTGAAGACAAATCAAACGGCCATTGCAAGGTAATCTGGGTGGAGCACTTAGAGTGCCAGAAAAGCACAGTTCAGACCATGTACCGGAGTATTGTCAACAGTGGTCTGGCTTTTGGGGCAAGACATTGGGTAGCGACGCTGCAACTCCAATGCGAAAGGCTTGTTTTCTTCATGGCAACCAATGTTCCAATGAAGGATTCAACTGGAGTAGCCACCTTGGCTGGGAGAAAAAGCATTTTGAAAATGGCACAAAGAATGACATCAAGTTTTTGTCGCGCAATTGGTGCATCAAGCTATCATACCTGGACCAAGATCACTAGCAAAACAGTTTCTTCAGTATGGTTGCCTGTCTCTCCTTTCACCCTCTTTGATTTTTTGAGAGACGAGACTCGCAGGAACGAGTGGGACATTATGTTAAATGGGGGTCCAGCACAAACAATTGCAAACCTATCCAAAGGACAAGATCGTGGCAATGCTGTTACTATTCAAACAATGAAATCAAAAGAAAACAGCATGTGGATTCTACAAGATAGCTGCATAAATGCTTACGAGTCCATGGTGGTATATGCTCCGGTGGATATCACGGGCATGCAATCTGTGATGACAGGATGTGACTCAAGCAACATGGCAGTATTGTCTTCAGGGTTCTCTATTCTTCCAGATGGGTTGGAATCAAGGCCTATGGTTATCACTTCGAGGCAAGAAGACCGAGGCAGTGACAGTGAAGGAGGAACTTTGCTGACCGTAGCATTTCAAGTGTTGACTAATACCTCTCCTACTGCCAAACTAACAATGGAGTCTGTGGAGTCTGCCAACACTCTTATATCATGTACTTTGAGAAATATTAAGACGAGCTTGCAGTGCGAGGATGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

740

Amino Acids

82.37

Weight (kDa)

5.8

Isoelectric Point (pI)

53.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	109 - 164	2.9e-19	Homeodomain
START	PF01852	278 - 501	1.2e-53	START domain
PDF2_C	PF25797	520 - 637	1.4e-49	PDF2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005711)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79840 AT1G79840 AT1G79840 AT1G79840 AT1G79840 AT1G79840
fragaria_vesca	FvH4_6g31780 FvH4_6g31780 FvH4_6g31780 FvH4_6g31780 FvH4_6g31780 FvH4_6g31780
malus_domestica	MD09G1209300.v1.1 MD17G1191000.v1.1
prunus_persica	Prupe.3G067200_v2.0.a1
pyrus_communis	pycom09g12540 pycom17g19810
rosa_chinensis	RchiOBHm_Chr2g0138951
rosa_laevigata	RLG00000019771
rosa_multiflora	Rmu_sc0001376.1_g000004
rosa_roxburghii	Rroxscaffold_2G00105840
rosa_rugosa	Rorug02G0353500 Rorug02G0353600
rosa_samantha	Rh2AG403500 Rh2BG413900 Rh2CG389600 Rh2DG423700
rosa_wichuraiana	Rw2G032830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	847, 971
AccI	GTMKAC	1 cut(s)	12
AccII	CGCG	1 cut(s)	1620
AciI	CCGC	5 cut(s)	116, 125, 168, 242, 976
AclWI	GGATC	1 cut(s)	981
AcoI	YGGCCR	4 cut(s)	195, 910, 977, 1363
AcuI	CTGAAG	2 cut(s)	1662, 1968
AcyI	GRCGYC	1 cut(s)	6
AfaI	GTAC	5 cut(s)	481, 938, 1158, 1427, 2176
AfeI	AGCGCT	1 cut(s)	375
AfiI	CCNNNNNNNGG	9 cut(s)	367, 490, 602, 847, 971, 975, 1372, 1428, 1566
AflIII	ACRYGT	1 cut(s)	15
AgeI	ACCGGT	1 cut(s)	794
AhlI	ACTAGT	1 cut(s)	1039
AjnI	CCWGG	3 cut(s)	671, 762, 1646
AjuI	GAANNNNNNNTTGG	4 cut(s)	38, 70, 1525, 1557
AloI	GAACNNNNNNTCC	2 cut(s)	362, 394
Alw21I	GWGCWC	1 cut(s)	1392
Alw26I	GTCTC	8 cut(s)	113, 294, 899, 1001, 1131, 1699, 1719, 1724
AlwI	GGATC	1 cut(s)	981
AlwNI	CAGNNNCTG	2 cut(s)	421, 971
Ama87I	CYCGRG	2 cut(s)	217, 1333
Aor51HI	AGCGCT	1 cut(s)	375
AoxI	GGCC	8 cut(s)	195, 220, 436, 910, 977, 996, 1363, 2021
ApaI	GGGCCC	1 cut(s)	224
ApeKI	GCWGC	8 cut(s)	207, 418, 430, 704, 1103, 1177, 1483, 1878
ArsI	GACNNNNNNTTYG	2 cut(s)	239, 271
AsiGI	ACCGGT	1 cut(s)	794
Asp700I	GAANNNNTTC	1 cut(s)	1080
AspLEI	GCGC	3 cut(s)	376, 507, 1622
AspS9I	GGNCC	6 cut(s)	220, 221, 760, 892, 1650, 1769
AsuC2I	CCSGG	2 cut(s)	106, 224
AsuHPI	GGTGA	4 cut(s)	305, 381, 1324, 1696
AvaI	CYCGRG	2 cut(s)	217, 1333
AvaII	GGWCC	4 cut(s)	760, 892, 1650, 1769
BaeGI	GKGCMC	2 cut(s)	224, 1203
BanII	GRGCYC	1 cut(s)	224
BbsI	GAAGAC	5 cut(s)	195, 252, 1356, 1974, 2055
Bbv12I	GWGCWC	1 cut(s)	1392
BbvCI	CCTCAGC	1 cut(s)	77
BbvI	GCAGC	8 cut(s)	219, 430, 442, 691, 1090, 1164, 1470, 1865
BccI	CCATC	7 cut(s)	284, 290, 402, 859, 1093, 2000, 2207
BceAI	ACGGC	5 cut(s)	138, 210, 462, 897, 1378
BciT130I	CCWGG	3 cut(s)	673, 764, 1648
BcnI	CCSGG	2 cut(s)	106, 224
BcoDI	GTCTC	8 cut(s)	113, 294, 899, 1001, 1131, 1699, 1719, 1724
BcuI	ACTAGT	1 cut(s)	1039
BfaI	CTAG	6 cut(s)	434, 618, 710, 819, 1040, 1662
BfmI	CTRYAG	1 cut(s)	870
BfoI	RGCGCY	2 cut(s)	377, 508
BglI	GCCNNNNNGGC	1 cut(s)	1562
BglII	AGATCT	1 cut(s)	1027
BlpI	GCTNAGC	1 cut(s)	422
Bme1390I	CCNGG	5 cut(s)	106, 224, 673, 764, 1648
Bme18I	GGWCC	4 cut(s)	760, 892, 1650, 1769
BmeT110I	CYCGRG	2 cut(s)	217, 1333
BmgT120I	GGNCC	6 cut(s)	220, 221, 760, 892, 1650, 1769
BmiI	GGNNCC	4 cut(s)	222, 467, 893, 1770
BmrFI	CCNGG	5 cut(s)	106, 224, 673, 764, 1648
BmrI	ACTGGG	2 cut(s)	762, 981
BmsI	GCATC	7 cut(s)	91, 250, 616, 1291, 1313, 1350, 1640
BmuI	ACTGGG	2 cut(s)	762, 981
BpiI	GAAGAC	5 cut(s)	195, 252, 1356, 1974, 2055
BplI	GAGNNNNNCTC	2 cut(s)	870, 902
BpmI	CTGGAG	2 cut(s)	897, 1569
Bpu10I	CCTNAGC	1 cut(s)	77
Bpu1102I	GCTNAGC	1 cut(s)	422
BpuEI	CTTGAG	3 cut(s)	830, 985, 1945
BpuMI	CCSGG	2 cut(s)	106, 224
BsaBI	GATNNNNATC	1 cut(s)	1062
BsaHI	GRCGYC	1 cut(s)	6
BsaJI	CCNNGG	8 cut(s)	446, 642, 684, 1308, 1332, 1560, 1899, 2053
BsaWI	WCCGGW	3 cut(s)	794, 1428, 1915
BsaXI	ACNNNNNCTCC	2 cut(s)	721, 751
Bsc4I	CCNNNNNNNGG	9 cut(s)	367, 490, 602, 847, 971, 975, 1372, 1428, 1566
Bse118I	RCCGGY	1 cut(s)	794
Bse1I	ACTGG	5 cut(s)	744, 757, 913, 976, 1552
Bse3DI	GCAATG	4 cut(s)	570, 852, 1366, 1822
Bse8I	GATNNNNATC	1 cut(s)	1062
BseBI	CCWGG	3 cut(s)	673, 764, 1648
BseDI	CCNNGG	8 cut(s)	446, 642, 684, 1308, 1332, 1560, 1899, 2053
BseGI	GGATG	7 cut(s)	292, 394, 731, 1063, 1304, 1958, 2218
BseJI	GATNNNNATC	1 cut(s)	1062
BseLI	CCNNNNNNNGG	9 cut(s)	367, 490, 602, 847, 971, 975, 1372, 1428, 1566
BseMI	GCAATG	4 cut(s)	570, 852, 1366, 1822
BseMII	CTCAG	4 cut(s)	91, 342, 413, 1232
BseNI	ACTGG	5 cut(s)	744, 757, 913, 976, 1552
BseRI	GAGGAG	2 cut(s)	659, 866
BseSI	GKGCMC	2 cut(s)	224, 1203
BseX3I	CGGCCG	1 cut(s)	195
BseXI	GCAGC	8 cut(s)	219, 430, 442, 691, 1090, 1164, 1470, 1865
BseYI	CCCAGC	2 cut(s)	86, 1565
Bsh1236I	CGCG	1 cut(s)	1620
Bsh1285I	CGRYCG	2 cut(s)	172, 198
BshFI	GGCC	8 cut(s)	197, 222, 438, 912, 979, 998, 1365, 2023
BshTI	ACCGGT	1 cut(s)	794
BsiEI	CGRYCG	2 cut(s)	172, 198
BsiHKAI	GWGCWC	1 cut(s)	1392
BsiHKCI	CYCGRG	2 cut(s)	217, 1333
BsiSI	CCGG	7 cut(s)	105, 113, 175, 224, 795, 1429, 1916
BslFI	GGGAC	5 cut(s)	121, 155, 742, 1314, 1763
BslI	CCNNNNNNNGG	9 cut(s)	367, 490, 602, 847, 971, 975, 1372, 1428, 1566
BsmAI	GTCTC	8 cut(s)	113, 294, 899, 1001, 1131, 1699, 1719, 1724
BsmBI	CGTCTC	3 cut(s)	113, 1001, 1719
BsmFI	GGGAC	5 cut(s)	121, 155, 742, 1314, 1763
BsnI	GGCC	8 cut(s)	197, 222, 438, 912, 979, 998, 1365, 2023
BsoBI	CYCGRG	2 cut(s)	217, 1333
Bsp120I	GGGCCC	1 cut(s)	220
Bsp1286I	GDGCHC	3 cut(s)	224, 1203, 1392
Bsp1407I	TGTACA	1 cut(s)	1156
Bsp143I	GATC	6 cut(s)	201, 236, 986, 1027, 1656, 1807
Bsp1720I	GCTNAGC	1 cut(s)	422
Bsp19I	CCATGG	1 cut(s)	1899
BspACI	CCGC	5 cut(s)	116, 125, 168, 242, 976
BspANI	GGCC	8 cut(s)	197, 222, 438, 912, 979, 998, 1365, 2023
BspCNI	CTCAG	4 cut(s)	90, 343, 414, 1233
BspFNI	CGCG	1 cut(s)	1620
BspLI	GGNNCC	4 cut(s)	222, 467, 893, 1770
BspPI	GGATC	1 cut(s)	981
BsrDI	GCAATG	4 cut(s)	570, 852, 1366, 1822
BsrFI	RCCGGY	1 cut(s)	794
BsrGI	TGTACA	1 cut(s)	1156
BsrI	ACTGG	5 cut(s)	744, 757, 913, 976, 1552
BssAI	RCCGGY	1 cut(s)	794
BssECI	CCNNGG	8 cut(s)	446, 642, 684, 1308, 1332, 1560, 1899, 2053
BssMI	GATC	6 cut(s)	201, 236, 986, 1027, 1656, 1807
BssNI	GRCGYC	1 cut(s)	6
BssT1I	CCWWGG	4 cut(s)	446, 1308, 1560, 1899
Bst2UI	CCWGG	3 cut(s)	673, 764, 1648
Bst4CI	ACNGT	8 cut(s)	602, 1111, 1254, 1414, 1445, 1672, 2066, 2089
Bst6I	CTCTTC	1 cut(s)	317
BstACI	GRCGYC	1 cut(s)	6
BstAPI	GCANNNNNTGC	1 cut(s)	1628
BstAUI	TGTACA	1 cut(s)	1156
BstC8I	GCNNGC	4 cut(s)	428, 1235, 1934, 2201
BstDEI	CTNAG	5 cut(s)	77, 351, 422, 1241, 1393
BstDSI	CCRYGG	1 cut(s)	1899
BstF5I	GGATG	7 cut(s)	292, 394, 731, 1063, 1304, 1958, 2218
BstFNI	CGCG	1 cut(s)	1620
BstH2I	RGCGCY	2 cut(s)	377, 508
BstHHI	GCGC	3 cut(s)	376, 507, 1622
BstKTI	GATC	6 cut(s)	204, 239, 989, 1030, 1659, 1810
BstMAI	GTCTC	8 cut(s)	113, 294, 899, 1001, 1131, 1699, 1719, 1724
BstMBI	GATC	6 cut(s)	201, 236, 986, 1027, 1656, 1807
BstMCI	CGRYCG	2 cut(s)	172, 198
BstNI	CCWGG	3 cut(s)	673, 764, 1648
BstNSI	RCATGY	3 cut(s)	19, 1861, 1936
BstSCI	CCNGG	5 cut(s)	104, 222, 671, 762, 1646
BstSFI	CTRYAG	1 cut(s)	870
BstSLI	GKGCMC	2 cut(s)	224, 1203
BstUI	CGCG	1 cut(s)	1620
BstV1I	GCAGC	8 cut(s)	219, 430, 442, 691, 1090, 1164, 1470, 1865
BstV2I	GAAGAC	5 cut(s)	195, 252, 1356, 1974, 2055
BstX2I	RGATCY	2 cut(s)	986, 1027
BstYI	RGATCY	2 cut(s)	986, 1027
BstZI	CGGCCG	1 cut(s)	195
BsuRI	GGCC	8 cut(s)	197, 222, 438, 912, 979, 998, 1365, 2023
BtgI	CCRYGG	1 cut(s)	1899
BtgZI	GCGATG	1 cut(s)	165
BtsCI	GGATG	7 cut(s)	292, 394, 731, 1063, 1304, 1958, 2218
BtsI	GCAGTG	3 cut(s)	613, 2065, 2210
BtsIMutI	CAGTG	9 cut(s)	348, 613, 969, 1107, 1259, 1450, 2065, 2071, 2210
Cac8I	GCNNGC	4 cut(s)	428, 1235, 1934, 2201
CaiI	CAGNNNCTG	2 cut(s)	421, 971
CfoI	GCGC	3 cut(s)	376, 507, 1622
Cfr10I	RCCGGY	1 cut(s)	794
Cfr13I	GGNCC	6 cut(s)	220, 221, 760, 892, 1650, 1769
CseI	GACGC	1 cut(s)	1489
Csp6I	GTAC	5 cut(s)	480, 937, 1157, 1426, 2175
CspAI	ACCGGT	1 cut(s)	794
CviQI	GTAC	5 cut(s)	480, 937, 1157, 1426, 2175
DdeI	CTNAG	5 cut(s)	77, 351, 422, 1241, 1393
DpnI	GATC	6 cut(s)	203, 238, 988, 1029, 1658, 1809
DpnII	GATC	6 cut(s)	201, 236, 986, 1027, 1656, 1807
EaeI	YGGCCR	4 cut(s)	195, 910, 977, 1363
EagI	CGGCCG	1 cut(s)	195
Eam1104I	CTCTTC	1 cut(s)	317
EarI	CTCTTC	1 cut(s)	317
EciI	GGCGGA	1 cut(s)	131
EclXI	CGGCCG	1 cut(s)	195
Eco130I	CCWWGG	4 cut(s)	446, 1308, 1560, 1899
Eco147I	AGGCCT	3 cut(s)	438, 998, 2023
Eco24I	GRGCYC	1 cut(s)	224
Eco32I	GATATC	1 cut(s)	1924
Eco47I	GGWCC	4 cut(s)	760, 892, 1650, 1769
Eco47III	AGCGCT	1 cut(s)	375
Eco52I	CGGCCG	1 cut(s)	195
Eco57I	CTGAAG	2 cut(s)	1662, 1968
Eco88I	CYCGRG	2 cut(s)	217, 1333
EcoRII	CCWGG	3 cut(s)	671, 762, 1646
EcoRV	GATATC	1 cut(s)	1924
EcoT14I	CCWWGG	4 cut(s)	446, 1308, 1560, 1899
EcoT22I	ATGCAT	1 cut(s)	1306
EcoT38I	GRGCYC	1 cut(s)	224
ErhI	CCWWGG	4 cut(s)	446, 1308, 1560, 1899
Esp3I	CGTCTC	3 cut(s)	113, 1001, 1719
FalI	AAGNNNNNCTT	2 cut(s)	2183, 2215
FaqI	GGGAC	5 cut(s)	121, 155, 742, 1314, 1763
FblI	GTMKAC	1 cut(s)	12
FokI	GGATG	6 cut(s)	299, 381, 718, 1070, 1291, 1965
FriOI	GRGCYC	1 cut(s)	224
FspBI	CTAG	6 cut(s)	434, 618, 710, 819, 1040, 1662
GlaI	GCGC	3 cut(s)	375, 506, 1621
GsaI	CCCAGC	2 cut(s)	90, 1569
GsuI	CTGGAG	2 cut(s)	897, 1569
HaeII	RGCGCY	2 cut(s)	377, 508
HaeIII	GGCC	8 cut(s)	197, 222, 438, 912, 979, 998, 1365, 2023
HapII	CCGG	7 cut(s)	105, 113, 175, 224, 795, 1429, 1916
HgaI	GACGC	1 cut(s)	1489
HhaI	GCGC	3 cut(s)	376, 507, 1622
Hin1I	GRCGYC	1 cut(s)	6
Hin6I	GCGC	3 cut(s)	374, 505, 1620
HinP1I	GCGC	3 cut(s)	374, 505, 1620
HincII	GTYRAC	4 cut(s)	13, 838, 1441, 2106
HindII	GTYRAC	4 cut(s)	13, 838, 1441, 2106
HpaI	GTTAAC	1 cut(s)	838
HpaII	CCGG	7 cut(s)	105, 113, 175, 224, 795, 1429, 1916
HphI	GGTGA	4 cut(s)	305, 381, 1324, 1696
Hpy166II	GTNNAC	5 cut(s)	13, 838, 1216, 1441, 2106
Hpy188I	TCNGA	9 cut(s)	98, 362, 548, 659, 685, 701, 896, 1047, 1419
Hpy188III	TCNNGA	6 cut(s)	183, 234, 398, 500, 809, 2003
Hpy8I	GTNNAC	5 cut(s)	13, 838, 1216, 1441, 2106
Hpy99I	CGWCG	3 cut(s)	11, 14, 1483
HpyAV	CCTTC	7 cut(s)	140, 149, 750, 1066, 1127, 1531, 2063
HpyCH4III	ACNGT	8 cut(s)	602, 1111, 1254, 1414, 1445, 1672, 2066, 2089
HpyCH4IV	ACGT	1 cut(s)	1327
HpyF3I	CTNAG	5 cut(s)	77, 351, 422, 1241, 1393
HpySE526I	ACGT	1 cut(s)	1327
Hsp92I	GRCGYC	1 cut(s)	6
HspAI	GCGC	3 cut(s)	374, 505, 1620
KspAI	GTTAAC	1 cut(s)	838
Kzo9I	GATC	6 cut(s)	201, 236, 986, 1027, 1656, 1807
LmnI	GCTCC	7 cut(s)	159, 448, 571, 646, 853, 1387, 1918
Lsp1109I	GCAGC	8 cut(s)	219, 430, 442, 691, 1090, 1164, 1470, 1865
LweI	GCATC	7 cut(s)	91, 250, 616, 1291, 1313, 1350, 1640
MaeI	CTAG	6 cut(s)	434, 618, 710, 819, 1040, 1662
MaeII	ACGT	1 cut(s)	1327
MaeIII	GTNAC	4 cut(s)	387, 1822, 1955, 2060
MalI	GATC	6 cut(s)	203, 238, 988, 1029, 1658, 1809
MboI	GATC	6 cut(s)	201, 236, 986, 1027, 1656, 1807
MfeI	CAATTG	3 cut(s)	1160, 1623, 1782
MflI	RGATCY	2 cut(s)	986, 1027
MhlI	GDGCHC	3 cut(s)	224, 1203, 1392
MluCI	AATT	5 cut(s)	576, 660, 1160, 1623, 1782
MlyI	GAGTC	7 cut(s)	103, 395, 1726, 1904, 1952, 2150, 2159
MmeI	TCCRAC	2 cut(s)	45, 1992
Mph1103I	ATGCAT	1 cut(s)	1306
MroXI	GAANNNNTTC	1 cut(s)	1080
MseI	TTAA	6 cut(s)	579, 837, 924, 1122, 1760, 2190
MslI	CAYNNNNRTG	3 cut(s)	399, 1058, 1931
MspA1I	CMGCKG	3 cut(s)	242, 421, 875
MspI	CCGG	7 cut(s)	105, 113, 175, 224, 795, 1429, 1916
MspR9I	CCNGG	5 cut(s)	106, 224, 673, 764, 1648
MunI	CAATTG	3 cut(s)	1160, 1623, 1782
MvaI	CCWGG	3 cut(s)	673, 764, 1648
MvnI	CGCG	1 cut(s)	1620
NciI	CCSGG	2 cut(s)	106, 224
NcoI	CCATGG	1 cut(s)	1899
NdeII	GATC	6 cut(s)	201, 236, 986, 1027, 1656, 1807
NlaIV	GGNNCC	4 cut(s)	222, 467, 893, 1770
NmeAIII	GCCGAG	2 cut(s)	223, 289
NmuCI	GTSAC	3 cut(s)	387, 1955, 2060
NsiI	ATGCAT	1 cut(s)	1306
NspI	RCATGY	3 cut(s)	19, 1861, 1936
PaeI	GCATGC	1 cut(s)	1936
PceI	AGGCCT	3 cut(s)	438, 998, 2023
PciI	ACATGT	1 cut(s)	15
PcsI	WCGNNNNNNNCGW	1 cut(s)	224
PdmI	GAANNNNTTC	1 cut(s)	1080
PfeI	GAWTC	4 cut(s)	1063, 1541, 1864, 2015
PflMI	CCANNNNNTGG	2 cut(s)	847, 971
PinAI	ACCGGT	1 cut(s)	794
PleI	GAGTC	7 cut(s)	103, 394, 1726, 1903, 1952, 2149, 2158
PpsI	GAGTC	7 cut(s)	103, 394, 1726, 1903, 1952, 2149, 2158
PscI	ACATGT	1 cut(s)	15
Psp6I	CCWGG	3 cut(s)	671, 762, 1646
PspFI	CCCAGC	2 cut(s)	86, 1565
PspGI	CCWGG	3 cut(s)	671, 762, 1646
PspN4I	GGNNCC	4 cut(s)	222, 467, 893, 1770
PspOMI	GGGCCC	1 cut(s)	220
PspPI	GGNCC	6 cut(s)	220, 221, 760, 892, 1650, 1769
PstNI	CAGNNNCTG	2 cut(s)	421, 971
PsuI	RGATCY	2 cut(s)	986, 1027
PvuII	CAGCTG	2 cut(s)	421, 875
RsaI	GTAC	5 cut(s)	481, 938, 1158, 1427, 2176
RsaNI	GTAC	5 cut(s)	480, 937, 1157, 1426, 2175
RseI	CAYNNNNRTG	3 cut(s)	399, 1058, 1931
SalI	GTCGAC	1 cut(s)	11
SaqAI	TTAA	6 cut(s)	579, 837, 924, 1122, 1760, 2190
Sau3AI	GATC	6 cut(s)	201, 236, 986, 1027, 1656, 1807
Sau96I	GGNCC	6 cut(s)	220, 221, 760, 892, 1650, 1769
SchI	GAGTC	7 cut(s)	103, 395, 1726, 1904, 1952, 2150, 2159
ScrFI	CCNGG	5 cut(s)	106, 224, 673, 764, 1648
SduI	GDGCHC	3 cut(s)	224, 1203, 1392
SfaNI	GCATC	7 cut(s)	91, 250, 616, 1291, 1313, 1350, 1640
SfcI	CTRYAG	1 cut(s)	870
SinI	GGWCC	4 cut(s)	760, 892, 1650, 1769
SmiMI	CAYNNNNRTG	3 cut(s)	399, 1058, 1931
SmlI	CTYRAG	3 cut(s)	809, 1000, 1960
SmoI	CTYRAG	3 cut(s)	809, 1000, 1960
SpeI	ACTAGT	1 cut(s)	1039
SphI	GCATGC	1 cut(s)	1936
Sse9I	AATT	5 cut(s)	576, 660, 1160, 1623, 1782
SseBI	AGGCCT	3 cut(s)	438, 998, 2023
SsiI	CCGC	5 cut(s)	116, 125, 168, 242, 976
SspI	AATATT	1 cut(s)	2188
SspMI	CTAG	6 cut(s)	434, 618, 710, 819, 1040, 1662
StuI	AGGCCT	3 cut(s)	438, 998, 2023
StyD4I	CCNGG	5 cut(s)	104, 222, 671, 762, 1646
StyI	CCWWGG	4 cut(s)	446, 1308, 1560, 1899
TaaI	ACNGT	8 cut(s)	602, 1111, 1254, 1414, 1445, 1672, 2066, 2089
TaiI	ACGT	1 cut(s)	1330
TaqI	TCGA	4 cut(s)	12, 182, 233, 2039
TaqII	GACCGA	1 cut(s)	2067
TasI	AATT	5 cut(s)	576, 660, 1160, 1623, 1782
TatI	WGTACW	3 cut(s)	936, 1156, 2174
TauI	GCSGC	2 cut(s)	128, 979
TfiI	GAWTC	4 cut(s)	1063, 1541, 1864, 2015
Tru1I	TTAA	6 cut(s)	579, 837, 924, 1122, 1760, 2190
Tru9I	TTAA	6 cut(s)	579, 837, 924, 1122, 1760, 2190
TscAI	CASTG	9 cut(s)	355, 613, 976, 1114, 1259, 1450, 2065, 2071, 2210
TseFI	GTSAC	3 cut(s)	387, 1955, 2060
TseI	GCWGC	8 cut(s)	207, 418, 430, 704, 1103, 1177, 1483, 1878
Tsp45I	GTSAC	3 cut(s)	387, 1955, 2060
TspDTI	ATGAA	6 cut(s)	168, 525, 1042, 1504, 1550, 1853
TspRI	CASTG	9 cut(s)	355, 613, 976, 1114, 1259, 1450, 2065, 2071, 2210
Van91I	CCANNNNNTGG	2 cut(s)	847, 971
VpaK11BI	GGWCC	4 cut(s)	760, 892, 1650, 1769
XceI	RCATGY	3 cut(s)	19, 1861, 1936
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2134
XmiI	GTMKAC	1 cut(s)	12
XmnI	GAANNNNTTC	1 cut(s)	1080
XspI	CTAG	6 cut(s)	434, 618, 710, 819, 1040, 1662
Zsp2I	ATGCAT	1 cut(s)	1306

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.