Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0005711

Physical Location & Seq

Genomic Coordinates Reverse (-)

53876132 .. 53881635

Gene Structure 5504 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G032830.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2376 bp

ATGAAGTTGGCTTCCCTAAAAATGTGTTTGAAACTAATAAAATCGTCCTCTCTTAATATAACACATGCACCTCGCTTGATTGCCATGGGCGTCGACATGTCCAACAATCCACCAACTTCTCGCACCAAAGACTTCTTTGCCTCCCCTGCTCTCTCCCTCAGCCTCGCTGGAATTTTTCGAGATGCCGGGACTCCGGCGGAGACGGCGGCTAATAGGGAGGGGGAAGAAGGGGATGAAGGGAGCGTAGGCGGCCGCCGGAGGTCGAGAGAAGACACGGCTGAGATTAGCAGCGAGAACTCTGGTCCAGCGAGGTCGAGATCAGCGGAGGACATTGATTTTGATGCAGAGTTAGGAGAGCCAGATGAAGATGATGGAGATGGAGACAACAAGAACAAGAAGAAAAAGAGAAAAAAGTACCATAGGCACACCACTGAGCAAATCCGAGAAATGGAAGCGCTGTTCAAGGAGTCACCCCATCCAGATGAGAAGCAAAGACAGCAGCTGAGCAAGCAGTTAGGCCTTGCTCCAAGGCAAGTCAAGTTTTGGTTCCAAAATCGCCGTACCCAAATCAAGGCTATACAAGAGCGCCATGAAAACTCGTTGTTGAAAGGAGAAATGGAGAAACTCCGAGACGAGAATAAGGCGATGAGGGAGCAAATAAACAAAGCTTGTTGCCCCAACTGTGGCAGTGCCACGACTAGCAGAGATGCCACCTTGACAACCGAGGAGCAACAACTCCGAATCGAAAATGCGAGACTCAAATCCGAGGTTGAAAAACTTCGAGCAGCTCTAGTAAAATACCCTATTGGGACATCCTCTCCTTCCAGCTCTACTGGCCAGGACCAGGAGAGCAGAAGTTCTTTGGACTTTTACACAGGAATTTTCGGTCTTGAGAAGTCGAGGATTATGGAGATAGTTAACCAAGCAATGGAGGAGCTTCAAAAGATGGCCACAGCTGGAGAACCACTCTGGGTTCGAAGTGTTGAGACTGGCCGTGAAATACTTAATTATGATGAGTACATCAAAGAGTTCAACATTGAAATTCCAGCCAGTGGGCGGCCAAAGAGATCCATTGAGGCCTCAAGGGACACGGGTGTGGTTTTTGTGGATCTCCCAAGACTAGTTCAGAGCTTCATGGATGTGAATCAATGGAAGGAAATGTTTCCATCTATGATCTCAAAGGCTGCCACTGTTGATGTTATTAGCAATGGCGAAGGAGACAATAGAAATGGTGCTGTACAACTGATGTTTGCAGAGCTGCAAATGCTTACACCTTTGGTGCCCACCAGAGAAGTTTACTTCGTTAGATGTAGCAAGCAACTGAGTCCTGAACAGTGGGCTGTTGTTGATGTTTCAATTGACAAAGTTGAAGATAACATTGATGCGTCCTTGGTGAAATGCAGAAAACGTCCCTCTGGTTGCATCATCGAAGACAAATCAAACGGCCATTGCAAGGTAATCTGGGTGGAGCACTTAGAGTGCCAGAAAAGCACAGTTCAGACCATGTACCGGAGTATAGTCAACAGTGGTCTGGCATTTGGTGCAAGACATTGGGTAGCGACGCTGCAACTCCAATGCGAAAGGCTTGTTTTCTTCATGGCAACCAATGTTCCGATGAAGGATTCAACTGGAGTAGCCACATTGGCTGGGAGAAAAAGCATTTTGAAAATGGCACAAAGAATGACATCAAGTTTTTGTCGCGCAATTGGAGCATCAAGCTACCATACCTGGACCAAGATCTCAAGCAAAACAGGTGATGACATCAGGATTTCCTCCAGGAAGAACTTGAACGATCCGGGAGAGCCTCTTGGTGTGATCTTGTGTGCTGTTTCTTCGGTATGGTTGCCTGTCTCTCCTTATGCCCTCTTCGATTTTTTGAGAGATGAGAATCGCAGGAACGAGTGGGACATTATGTTAAATGGGGGTCCGGCGCAAACAATTGCAAACCTATCCAAAGGACAAGATCGTGGCAATGCTGTTACTATTCAAACAATGAAATCAAAAGAGAACAGCATGTGGATTCTACAAGATAGCTGCATAAATGCTTACGAGTCCATGGTGGTTTATGCTCCGGTGGATATCACTGGCATGCAGTCTGTGATGACAGGATGCGACTCGAGCAACATGGCCGTATTGTCTTCAGGGTTCTCAATTCTTCCAGATGGGTTGGAGTCGAGGCCTATGGTCATCACTTCCAGGCAAGAAGATCGAGGCAGTGACAGTGAAGGAGGAACTTTGTTAACCGTAGCATTTCAAGTCTTGACTAATACCTCTCCTACTGCCAAACTAACTGTGGAGTCTGTAGAGTCTGCCAACACTCTTATATCATGTACTTTGAGAAATATTAAGACGAGCTTGCAGTGTGAGGATGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

791

Amino Acids

87.9

Weight (kDa)

6.27

Isoelectric Point (pI)

54.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	136 - 191	3.8e-19	Homeodomain
START	PF01852	305 - 528	3.1e-53	START domain
PDF2_C	PF25797	547 - 788	4.4e-106	PDF2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005711)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79840 AT1G79840 AT1G79840 AT1G79840 AT1G79840 AT1G79840
fragaria_vesca	FvH4_6g31780 FvH4_6g31780 FvH4_6g31780 FvH4_6g31780 FvH4_6g31780 FvH4_6g31780
malus_domestica	MD09G1209300.v1.1 MD17G1191000.v1.1
prunus_persica	Prupe.3G067200_v2.0.a1
pyrus_communis	pycom09g12540 pycom17g19810
rosa_chinensis	RchiOBHm_Chr2g0138951
rosa_laevigata	RLG00000019771
rosa_multiflora	Rmu_sc0001376.1_g000004
rosa_roxburghii	Rroxscaffold_2G00105840
rosa_rugosa	Rorug02G0353500 Rorug02G0353600
rosa_samantha	Rh2AG403500 Rh2BG413900 Rh2CG389600 Rh2DG423700
rosa_wichuraiana	Rw2G032830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1279
AccB7I	CCANNNNNTGG	2 cut(s)	928, 1052
AccI	GTMKAC	1 cut(s)	93
AccII	CGCG	1 cut(s)	1701
AciI	CCGC	6 cut(s)	197, 206, 249, 253, 323, 1057
AclWI	GGATC	3 cut(s)	1062, 1116, 1787
AcoI	YGGCCR	7 cut(s)	250, 835, 948, 991, 1058, 1444, 2127
AcsI	RAATTY	3 cut(s)	171, 879, 1041
AcuI	CTGAAG	1 cut(s)	2124
AcyI	GRCGYC	1 cut(s)	90
AfaI	GTAC	6 cut(s)	416, 562, 1019, 1239, 1508, 2332
AfeI	AGCGCT	1 cut(s)	456
AfiI	CCNNNNNNNGG	9 cut(s)	448, 571, 683, 844, 928, 1052, 1056, 1453, 1509
AflIII	ACRYGT	1 cut(s)	96
AhlI	ACTAGT	1 cut(s)	1120
AjnI	CCWGG	5 cut(s)	837, 843, 1727, 1775, 2195
AleI	CACNNNNGTG	1 cut(s)	1094
AloI	GAACNNNNNNTCC	2 cut(s)	443, 475
Alw21I	GWGCWC	1 cut(s)	1473
Alw26I	GTCTC	7 cut(s)	194, 375, 624, 748, 980, 1212, 1855
AlwI	GGATC	3 cut(s)	1062, 1116, 1787
AlwNI	CAGNNNCTG	1 cut(s)	502
Ama87I	CYCGRG	1 cut(s)	2116
Aor51HI	AGCGCT	1 cut(s)	456
ApeKI	GCWGC	7 cut(s)	288, 499, 785, 1184, 1258, 1564, 2034
ApoI	RAATTY	3 cut(s)	171, 879, 1041
ArsI	GACNNNNNNTTYG	2 cut(s)	320, 352
Asp700I	GAANNNNTTC	2 cut(s)	777, 1161
AspLEI	GCGC	4 cut(s)	457, 588, 1703, 1933
AspS9I	GGNCC	4 cut(s)	302, 841, 1731, 1925
AsuC2I	CCSGG	2 cut(s)	187, 1797
AsuHPI	GGTGA	3 cut(s)	462, 1405, 1766
AsuII	TTCGAA	1 cut(s)	976
AvaI	CYCGRG	1 cut(s)	2116
AvaII	GGWCC	4 cut(s)	302, 841, 1731, 1925
BaeGI	GKGCMC	1 cut(s)	1284
BalI	TGGCCA	2 cut(s)	837, 950
BanI	GGYRCC	1 cut(s)	1279
BbsI	GAAGAC	3 cut(s)	276, 1437, 2130
Bbv12I	GWGCWC	1 cut(s)	1473
BbvCI	CCTCAGC	1 cut(s)	158
BbvI	GCAGC	7 cut(s)	300, 511, 797, 1171, 1245, 1551, 2021
BccI	CCATC	7 cut(s)	365, 371, 483, 940, 1174, 2156, 2363
BceAI	ACGGC	6 cut(s)	219, 291, 543, 978, 1459, 2114
BcgI	CGANNNNNNTGC	2 cut(s)	2189, 2223
BciT130I	CCWGG	5 cut(s)	839, 845, 1729, 1777, 2197
BcnI	CCSGG	2 cut(s)	187, 1797
BcoDI	GTCTC	7 cut(s)	194, 375, 624, 748, 980, 1212, 1855
BcuI	ACTAGT	1 cut(s)	1120
BfaI	CTAG	3 cut(s)	699, 791, 1121
BfmI	CTRYAG	1 cut(s)	2301
BfoI	RGCGCY	2 cut(s)	458, 589
BglI	GCCNNNNNGGC	1 cut(s)	1643
BglII	AGATCT	1 cut(s)	1737
BlpI	GCTNAGC	1 cut(s)	503
Bme1390I	CCNGG	7 cut(s)	187, 839, 845, 1729, 1777, 1797, 2197
Bme18I	GGWCC	4 cut(s)	302, 841, 1731, 1925
BmeT110I	CYCGRG	1 cut(s)	2116
BmgT120I	GGNCC	4 cut(s)	302, 841, 1731, 1925
BmiI	GGNNCC	3 cut(s)	548, 1281, 1926
BmrFI	CCNGG	7 cut(s)	187, 839, 845, 1729, 1777, 1797, 2197
BmsI	GCATC	7 cut(s)	172, 331, 697, 1372, 1431, 1721, 2099
BpiI	GAAGAC	3 cut(s)	276, 1437, 2130
BplI	GAGNNNNNCTC	2 cut(s)	951, 983
BpmI	CTGGAG	3 cut(s)	978, 1650, 1759
Bpu10I	CCTNAGC	1 cut(s)	158
Bpu1102I	GCTNAGC	1 cut(s)	503
Bpu14I	TTCGAA	1 cut(s)	976
BpuEI	CTTGAG	3 cut(s)	911, 1066, 1726
BpuMI	CCSGG	2 cut(s)	187, 1797
BsaBI	GATNNNNATC	2 cut(s)	1143, 1887
BsaHI	GRCGYC	1 cut(s)	90
BsaJI	CCNNGG	6 cut(s)	84, 527, 723, 765, 1389, 2055
BsaWI	WCCGGW	2 cut(s)	1509, 2071
BsaXI	ACNNNNNCTCC	2 cut(s)	802, 832
Bsc4I	CCNNNNNNNGG	9 cut(s)	448, 571, 683, 844, 928, 1052, 1056, 1453, 1509
Bse1I	ACTGG	5 cut(s)	838, 994, 1050, 1633, 2089
Bse3DI	GCAATG	4 cut(s)	933, 1213, 1447, 1978
Bse8I	GATNNNNATC	2 cut(s)	1143, 1887
BseBI	CCWGG	5 cut(s)	839, 845, 1729, 1777, 2197
BseDI	CCNNGG	6 cut(s)	84, 527, 723, 765, 1389, 2055
BseGI	GGATG	6 cut(s)	238, 475, 812, 1144, 2114, 2374
BseJI	GATNNNNATC	2 cut(s)	1143, 1887
BseLI	CCNNNNNNNGG	9 cut(s)	448, 571, 683, 844, 928, 1052, 1056, 1453, 1509
BseMI	GCAATG	4 cut(s)	933, 1213, 1447, 1978
BseMII	CTCAG	5 cut(s)	172, 270, 423, 494, 1313
BseNI	ACTGG	5 cut(s)	838, 994, 1050, 1633, 2089
BseRI	GAGGAG	2 cut(s)	740, 947
BseSI	GKGCMC	1 cut(s)	1284
BseX3I	CGGCCG	1 cut(s)	250
BseXI	GCAGC	7 cut(s)	300, 511, 797, 1171, 1245, 1551, 2021
BseYI	CCCAGC	1 cut(s)	1646
Bsh1236I	CGCG	1 cut(s)	1701
Bsh1285I	CGRYCG	1 cut(s)	253
BshNI	GGYRCC	1 cut(s)	1279
BsiEI	CGRYCG	1 cut(s)	253
BsiHKAI	GWGCWC	1 cut(s)	1473
BsiHKCI	CYCGRG	1 cut(s)	2116
BsiSI	CCGG	7 cut(s)	186, 194, 256, 1510, 1796, 1928, 2072
BslFI	GGGAC	5 cut(s)	202, 823, 1100, 1395, 1919
BslI	CCNNNNNNNGG	9 cut(s)	448, 571, 683, 844, 928, 1052, 1056, 1453, 1509
BsmAI	GTCTC	7 cut(s)	194, 375, 624, 748, 980, 1212, 1855
BsmBI	CGTCTC	2 cut(s)	194, 624
BsmFI	GGGAC	5 cut(s)	202, 823, 1100, 1395, 1919
BsoBI	CYCGRG	1 cut(s)	2116
Bsp119I	TTCGAA	1 cut(s)	976
Bsp1286I	GDGCHC	2 cut(s)	1284, 1473
Bsp1407I	TGTACA	1 cut(s)	1237
Bsp143I	GATC	9 cut(s)	317, 1067, 1108, 1173, 1737, 1792, 1815, 1963, 2206
Bsp1720I	GCTNAGC	1 cut(s)	503
Bsp19I	CCATGG	2 cut(s)	84, 2055
BspACI	CCGC	6 cut(s)	197, 206, 249, 253, 323, 1057
BspCNI	CTCAG	5 cut(s)	171, 271, 424, 495, 1314
BspFNI	CGCG	1 cut(s)	1701
BspLI	GGNNCC	3 cut(s)	548, 1281, 1926
BspPI	GGATC	3 cut(s)	1062, 1116, 1787
BspT104I	TTCGAA	1 cut(s)	976
BspT107I	GGYRCC	1 cut(s)	1279
BsrDI	GCAATG	4 cut(s)	933, 1213, 1447, 1978
BsrGI	TGTACA	1 cut(s)	1237
BsrI	ACTGG	5 cut(s)	838, 994, 1050, 1633, 2089
BssECI	CCNNGG	6 cut(s)	84, 527, 723, 765, 1389, 2055
BssMI	GATC	9 cut(s)	317, 1067, 1108, 1173, 1737, 1792, 1815, 1963, 2206
BssNI	GRCGYC	1 cut(s)	90
BssT1I	CCWWGG	4 cut(s)	84, 527, 1389, 2055
Bst2UI	CCWGG	5 cut(s)	839, 845, 1729, 1777, 2197
Bst4CI	ACNGT	8 cut(s)	683, 1192, 1335, 1495, 1526, 2222, 2245, 2293
Bst6I	CTCTTC	1 cut(s)	1871
BstACI	GRCGYC	1 cut(s)	90
BstAPI	GCANNNNNTGC	1 cut(s)	1541
BstAUI	TGTACA	1 cut(s)	1237
BstBI	TTCGAA	1 cut(s)	976
BstC8I	GCNNGC	4 cut(s)	509, 1316, 2090, 2357
BstDEI	CTNAG	6 cut(s)	158, 279, 432, 503, 1322, 1474
BstDSI	CCRYGG	2 cut(s)	84, 2055
BstF5I	GGATG	6 cut(s)	238, 475, 812, 1144, 2114, 2374
BstFNI	CGCG	1 cut(s)	1701
BstH2I	RGCGCY	2 cut(s)	458, 589
BstHHI	GCGC	4 cut(s)	457, 588, 1703, 1933
BstKTI	GATC	9 cut(s)	320, 1070, 1111, 1176, 1740, 1795, 1818, 1966, 2209
BstMAI	GTCTC	7 cut(s)	194, 375, 624, 748, 980, 1212, 1855
BstMBI	GATC	9 cut(s)	317, 1067, 1108, 1173, 1737, 1792, 1815, 1963, 2206
BstMCI	CGRYCG	1 cut(s)	253
BstNI	CCWGG	5 cut(s)	839, 845, 1729, 1777, 2197
BstNSI	RCATGY	4 cut(s)	68, 100, 2017, 2092
BstSCI	CCNGG	7 cut(s)	185, 837, 843, 1727, 1775, 1795, 2195
BstSFI	CTRYAG	1 cut(s)	2301
BstSLI	GKGCMC	1 cut(s)	1284
BstUI	CGCG	1 cut(s)	1701
BstV1I	GCAGC	7 cut(s)	300, 511, 797, 1171, 1245, 1551, 2021
BstV2I	GAAGAC	3 cut(s)	276, 1437, 2130
BstX2I	RGATCY	3 cut(s)	1067, 1108, 1737
BstYI	RGATCY	3 cut(s)	1067, 1108, 1737
BstZI	CGGCCG	1 cut(s)	250
BtgI	CCRYGG	2 cut(s)	84, 2055
BtgZI	GCGATG	1 cut(s)	659
BtsCI	GGATG	6 cut(s)	238, 475, 812, 1144, 2114, 2374
BtsI	GCAGTG	3 cut(s)	694, 2221, 2366
Cac8I	GCNNGC	4 cut(s)	509, 1316, 2090, 2357
CaiI	CAGNNNCTG	1 cut(s)	502
CciNI	GCGGCCGC	1 cut(s)	250
CfoI	GCGC	4 cut(s)	457, 588, 1703, 1933
Cfr13I	GGNCC	4 cut(s)	302, 841, 1731, 1925
CseI	GACGC	3 cut(s)	79, 1374, 1570
Csp6I	GTAC	6 cut(s)	415, 561, 1018, 1238, 1507, 2331
CviQI	GTAC	6 cut(s)	415, 561, 1018, 1238, 1507, 2331
DdeI	CTNAG	6 cut(s)	158, 279, 432, 503, 1322, 1474
DpnI	GATC	9 cut(s)	319, 1069, 1110, 1175, 1739, 1794, 1817, 1965, 2208
DpnII	GATC	9 cut(s)	317, 1067, 1108, 1173, 1737, 1792, 1815, 1963, 2206
EaeI	YGGCCR	7 cut(s)	250, 835, 948, 991, 1058, 1444, 2127
EagI	CGGCCG	1 cut(s)	250
Eam1104I	CTCTTC	1 cut(s)	1871
EarI	CTCTTC	1 cut(s)	1871
EciI	GGCGGA	1 cut(s)	212
EclXI	CGGCCG	1 cut(s)	250
Eco130I	CCWWGG	4 cut(s)	84, 527, 1389, 2055
Eco147I	AGGCCT	3 cut(s)	519, 1079, 2179
Eco32I	GATATC	1 cut(s)	2080
Eco47I	GGWCC	4 cut(s)	302, 841, 1731, 1925
Eco47III	AGCGCT	1 cut(s)	456
Eco52I	CGGCCG	1 cut(s)	250
Eco57I	CTGAAG	1 cut(s)	2124
Eco88I	CYCGRG	1 cut(s)	2116
EcoRII	CCWGG	5 cut(s)	837, 843, 1727, 1775, 2195
EcoRV	GATATC	1 cut(s)	2080
EcoT14I	CCWWGG	4 cut(s)	84, 527, 1389, 2055
ErhI	CCWWGG	4 cut(s)	84, 527, 1389, 2055
Esp3I	CGTCTC	2 cut(s)	194, 624
FalI	AAGNNNNNCTT	2 cut(s)	2339, 2371
FaqI	GGGAC	5 cut(s)	202, 823, 1100, 1395, 1919
FblI	GTMKAC	1 cut(s)	93
FokI	GGATG	5 cut(s)	245, 462, 799, 1151, 2121
FspBI	CTAG	3 cut(s)	699, 791, 1121
GlaI	GCGC	4 cut(s)	456, 587, 1702, 1932
GsaI	CCCAGC	1 cut(s)	1650
GsuI	CTGGAG	3 cut(s)	978, 1650, 1759
HaeII	RGCGCY	2 cut(s)	458, 589
HapII	CCGG	7 cut(s)	186, 194, 256, 1510, 1796, 1928, 2072
HgaI	GACGC	3 cut(s)	79, 1374, 1570
HhaI	GCGC	4 cut(s)	457, 588, 1703, 1933
Hin1I	GRCGYC	1 cut(s)	90
Hin6I	GCGC	4 cut(s)	455, 586, 1701, 1931
HinP1I	GCGC	4 cut(s)	455, 586, 1701, 1931
HincII	GTYRAC	4 cut(s)	94, 919, 1522, 2241
HindII	GTYRAC	4 cut(s)	94, 919, 1522, 2241
HindIII	AAGCTT	1 cut(s)	666
HpaI	GTTAAC	2 cut(s)	919, 2241
HpaII	CCGG	7 cut(s)	186, 194, 256, 1510, 1796, 1928, 2072
HphI	GGTGA	3 cut(s)	462, 1405, 1766
Hpy166II	GTNNAC	5 cut(s)	94, 919, 1297, 1522, 2241
Hpy188I	TCNGA	7 cut(s)	443, 629, 740, 766, 1128, 1500, 1614
Hpy188III	TCNNGA	9 cut(s)	179, 264, 315, 479, 890, 1328, 1765, 2159, 2260
Hpy8I	GTNNAC	5 cut(s)	94, 919, 1297, 1522, 2241
Hpy99I	CGWCG	2 cut(s)	95, 1564
HpyAV	CCTTC	7 cut(s)	221, 230, 831, 1147, 1208, 1612, 2219
HpyCH4III	ACNGT	8 cut(s)	683, 1192, 1335, 1495, 1526, 2222, 2245, 2293
HpyCH4IV	ACGT	1 cut(s)	1408
HpyF3I	CTNAG	6 cut(s)	158, 279, 432, 503, 1322, 1474
HpySE526I	ACGT	1 cut(s)	1408
Hsp92I	GRCGYC	1 cut(s)	90
HspAI	GCGC	4 cut(s)	455, 586, 1701, 1931
KspAI	GTTAAC	2 cut(s)	919, 2241
Kzo9I	GATC	9 cut(s)	317, 1067, 1108, 1173, 1737, 1792, 1815, 1963, 2206
LmnI	GCTCC	8 cut(s)	240, 529, 652, 727, 934, 1468, 1709, 2074
Lsp1109I	GCAGC	7 cut(s)	300, 511, 797, 1171, 1245, 1551, 2021
LweI	GCATC	7 cut(s)	172, 331, 697, 1372, 1431, 1721, 2099
MaeI	CTAG	3 cut(s)	699, 791, 1121
MaeII	ACGT	1 cut(s)	1408
MaeIII	GTNAC	3 cut(s)	468, 1978, 2216
MalI	GATC	9 cut(s)	319, 1069, 1110, 1175, 1739, 1794, 1817, 1965, 2208
MboI	GATC	9 cut(s)	317, 1067, 1108, 1173, 1737, 1792, 1815, 1963, 2206
MfeI	CAATTG	3 cut(s)	1356, 1704, 1938
MflI	RGATCY	3 cut(s)	1067, 1108, 1737
MhlI	GDGCHC	2 cut(s)	1284, 1473
MlsI	TGGCCA	2 cut(s)	837, 950
MluCI	AATT	8 cut(s)	171, 879, 1006, 1041, 1356, 1704, 1938, 2151
MluNI	TGGCCA	2 cut(s)	837, 950
MlyI	GAGTC	9 cut(s)	184, 476, 750, 1333, 2060, 2108, 2180, 2306, 2315
MmeI	TCCRAC	2 cut(s)	126, 2148
Mox20I	TGGCCA	2 cut(s)	837, 950
MroXI	GAANNNNTTC	2 cut(s)	777, 1161
MscI	TGGCCA	2 cut(s)	837, 950
MseI	TTAA	6 cut(s)	54, 918, 1005, 1916, 2240, 2346
MslI	CAYNNNNRTG	4 cut(s)	480, 1094, 1139, 2087
Msp20I	TGGCCA	2 cut(s)	837, 950
MspA1I	CMGCKG	3 cut(s)	323, 502, 956
MspI	CCGG	7 cut(s)	186, 194, 256, 1510, 1796, 1928, 2072
MspR9I	CCNGG	7 cut(s)	187, 839, 845, 1729, 1777, 1797, 2197
MunI	CAATTG	3 cut(s)	1356, 1704, 1938
MvaI	CCWGG	5 cut(s)	839, 845, 1729, 1777, 2197
MvnI	CGCG	1 cut(s)	1701
NciI	CCSGG	2 cut(s)	187, 1797
NcoI	CCATGG	2 cut(s)	84, 2055
NdeII	GATC	9 cut(s)	317, 1067, 1108, 1173, 1737, 1792, 1815, 1963, 2206
NlaIV	GGNNCC	3 cut(s)	548, 1281, 1926
NmuCI	GTSAC	2 cut(s)	468, 2216
NotI	GCGGCCGC	1 cut(s)	250
NspI	RCATGY	4 cut(s)	68, 100, 2017, 2092
NspV	TTCGAA	1 cut(s)	976
OliI	CACNNNNGTG	1 cut(s)	1094
PaeI	GCATGC	1 cut(s)	2092
PaeR7I	CTCGAG	1 cut(s)	2116
PceI	AGGCCT	3 cut(s)	519, 1079, 2179
PciI	ACATGT	1 cut(s)	96
PdmI	GAANNNNTTC	2 cut(s)	777, 1161
PfeI	GAWTC	5 cut(s)	741, 1144, 1622, 1888, 2020
PflMI	CCANNNNNTGG	2 cut(s)	928, 1052
PfoI	TCCNGGA	2 cut(s)	1775, 1795
PleI	GAGTC	9 cut(s)	184, 475, 750, 1332, 2059, 2108, 2179, 2305, 2314
PpsI	GAGTC	9 cut(s)	184, 475, 750, 1332, 2059, 2108, 2179, 2305, 2314
PscI	ACATGT	1 cut(s)	96
Psp6I	CCWGG	5 cut(s)	837, 843, 1727, 1775, 2195
PspFI	CCCAGC	1 cut(s)	1646
PspGI	CCWGG	5 cut(s)	837, 843, 1727, 1775, 2195
PspN4I	GGNNCC	3 cut(s)	548, 1281, 1926
PspPI	GGNCC	4 cut(s)	302, 841, 1731, 1925
PspXI	VCTCGAGB	1 cut(s)	2116
PstNI	CAGNNNCTG	1 cut(s)	502
PsuI	RGATCY	3 cut(s)	1067, 1108, 1737
PvuII	CAGCTG	2 cut(s)	502, 956
RsaI	GTAC	6 cut(s)	416, 562, 1019, 1239, 1508, 2332
RsaNI	GTAC	6 cut(s)	415, 561, 1018, 1238, 1507, 2331
RseI	CAYNNNNRTG	4 cut(s)	480, 1094, 1139, 2087
SalI	GTCGAC	1 cut(s)	92
SaqAI	TTAA	6 cut(s)	54, 918, 1005, 1916, 2240, 2346
Sau3AI	GATC	9 cut(s)	317, 1067, 1108, 1173, 1737, 1792, 1815, 1963, 2206
Sau96I	GGNCC	4 cut(s)	302, 841, 1731, 1925
SchI	GAGTC	9 cut(s)	184, 476, 750, 1333, 2060, 2108, 2180, 2306, 2315
ScrFI	CCNGG	7 cut(s)	187, 839, 845, 1729, 1777, 1797, 2197
SduI	GDGCHC	2 cut(s)	1284, 1473
SfaNI	GCATC	7 cut(s)	172, 331, 697, 1372, 1431, 1721, 2099
SfcI	CTRYAG	1 cut(s)	2301
Sfr274I	CTCGAG	1 cut(s)	2116
SfuI	TTCGAA	1 cut(s)	976
SinI	GGWCC	4 cut(s)	302, 841, 1731, 1925
SlaI	CTCGAG	1 cut(s)	2116
SmiMI	CAYNNNNRTG	4 cut(s)	480, 1094, 1139, 2087
SmlI	CTYRAG	4 cut(s)	890, 1081, 1741, 2116
SmoI	CTYRAG	4 cut(s)	890, 1081, 1741, 2116
SpeI	ACTAGT	1 cut(s)	1120
SphI	GCATGC	1 cut(s)	2092
Sse9I	AATT	8 cut(s)	171, 879, 1006, 1041, 1356, 1704, 1938, 2151
SseBI	AGGCCT	3 cut(s)	519, 1079, 2179
SsiI	CCGC	6 cut(s)	197, 206, 249, 253, 323, 1057
SspI	AATATT	1 cut(s)	2344
SspMI	CTAG	3 cut(s)	699, 791, 1121
StuI	AGGCCT	3 cut(s)	519, 1079, 2179
StyD4I	CCNGG	7 cut(s)	185, 837, 843, 1727, 1775, 1795, 2195
StyI	CCWWGG	4 cut(s)	84, 527, 1389, 2055
TaaI	ACNGT	8 cut(s)	683, 1192, 1335, 1495, 1526, 2222, 2245, 2293
TaiI	ACGT	1 cut(s)	1411
TaqII	GACCGA	1 cut(s)	875
TasI	AATT	8 cut(s)	171, 879, 1006, 1041, 1356, 1704, 1938, 2151
TatI	WGTACW	3 cut(s)	1017, 1237, 2330
TauI	GCSGC	4 cut(s)	209, 252, 255, 1060
TfiI	GAWTC	5 cut(s)	741, 1144, 1622, 1888, 2020
Tru1I	TTAA	6 cut(s)	54, 918, 1005, 1916, 2240, 2346
Tru9I	TTAA	6 cut(s)	54, 918, 1005, 1916, 2240, 2346
TseFI	GTSAC	2 cut(s)	468, 2216
TseI	GCWGC	7 cut(s)	288, 499, 785, 1184, 1258, 1564, 2034
Tsp45I	GTSAC	2 cut(s)	468, 2216
TspDTI	ATGAA	8 cut(s)	17, 249, 378, 606, 1123, 1585, 1631, 2009
Van91I	CCANNNNNTGG	2 cut(s)	928, 1052
VpaK11BI	GGWCC	4 cut(s)	302, 841, 1731, 1925
XapI	RAATTY	3 cut(s)	171, 879, 1041
XceI	RCATGY	4 cut(s)	68, 100, 2017, 2092
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2290
XhoI	CTCGAG	1 cut(s)	2116
XmiI	GTMKAC	1 cut(s)	93
XmnI	GAANNNNTTC	2 cut(s)	777, 1161
XspI	CTAG	3 cut(s)	699, 791, 1121

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.