Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0005711

Physical Location & Seq

Genomic Coordinates Forward (+)

20171374 .. 20175770

Gene Structure 4397 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1209300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2289 bp

ATGGGCGTCGACATGTCTAACAATCCACCAACTTCTCGCACCAAGGACTTCTTTGCTTCCCCAGCCCTCTCCCTCTCCCTCGCCGGGATTTTTCGTGATGCTGGGGCGGCGGCCGTGGCAAGCAGGGAGGTGGAGGAAGGAGATGAGGGCAGCGGTGGAGGCGGAAGCGCAGCTGTAGGCAGTGTTCGCCGGAGAGAAGACACAGCGGAGATTAGCAGCGAGAACTCCGGGCCAGCAAGGTCGAGATCAGAAGATGAATTTGACGCAGAAGGAGAGCATGACGAAGATGATGCTGATGGAGACAACAAGAACAAGAAGAAGAAGAGGAAAAAGTACCATAGGCACACCACTGAGCAAATCCGAGAAATGGAAGCGTTGTTCAAAGAATCACCACATCCTGATGAGAAGCAAAGGCAGCAACTGAGCAAGCAATTAGGCCTTGCTCCAAGGCAGGTCAAATTTTGGTTTCAGAATCGTCGAACCCAAATCAAGGCTATACAAGAACGCCATGAAAATTCTCTGTTGAAAGGCGAAATGGAGAAACTCCGCGACGAAAATAAGGCAATGAGGGAGCAGATAAACAAATCTTGCTGCCCCAACTGTGGCACTGCAACCACTAGCCGGGATGCCACCCTCACGACCGAGGAGCAACAACTGCGAATCGAAAATGCCAGACTCAAATCCGAGGTCGAAAAACTCAGAGCAGCTCTTGTAAAATACCCTCCCGGGTCATCCTCTCCTTCCTGCTCCGCTGGCCAAGACCAGGAGAATAGAAGCTCTTTGGATTTCTACACTGGAATATTCGGAATTGAGAAGTCGAGGATAATGGAGATAGTGAATCAAGCAATGGAAGAGCTTAAGAAGATGGCTACTGCAGGGGAACCACTCTGGATTCGGAGTGTGGAGACTGGCCGTGAAATACTTAATTACGATGAGTACATCAAAGAGTTCAACATTGAAGTTCCTAGCAATGCGCGGCCAAAGAGATCCATTGAGGCCTCCAGAGAGACCGGGGTGGTGTTTGTGGATCTTCCGCGACTAGTTCACAGTTTCATGGATGAGAATCAATGGAAGGAAATGTTTCCATGCATGATCTCAAAGGCGGCAACTGTTGATGTTATTAACAATGGTGAAGGAGACAATAGAAATGGTGCAGTACAATTGATGTTTGCAGAGCTGCAAATGCTTACGCCCTTGGTTCCCACTAGAGAAGTGTACTTCGTTAGATGTTGCAAGCAATTGAGTCCTGAACAATGGGCTATTGTTGATGTTTCGATTGACAAAGTCGAAGATAGCATAGATGCGTCCTTGGTGAAATGCAGGAAGCGTCCCTCTGGCTGCATCATTGAGGACGAATCAAATGGCCACTGCAAGGTGATCTGGGTGGAGCACCTAGAATGCCAGAAGAGCACAATTCAGACCATGTACCGCACCATTGTCAACAGCAGTCTAGCATTTGGAGCAAGACATTGGGTAGCAACGCTGCAACTGCAATGCGAACGACTTGTTTTCTTCATGGCAACCAATGTTCCCATGAAGGATTCAACCGGTGTGGCCACCCTTGCTGGGAGAAAAAGCATTCTAAAATTGGCACAAAGAATGACAACGAGCTTTTGTCGTGCAATCGGAGCATCAAGCTACCATACCTGGACTAAGATCTCAAGCAAAACAGGGGACGACATAAGAATTGCCTCCAGAAAGAACTTGAACGACCCAGGAGAGCCTCTTGGTGTGATTTTGTGTGCTGTTTCTTCAGTATGGCTGCCCATCTCTCCTCATGTGCTCTTCGATTTCTTAAGAGACGAGACTCGCAGGAATGAGTGGGACATTATGTTAAATGGAGGACCAGCTCAAACAATTGCAAACCTATCCAAAGGACAAGATCGTGGCAATGCTGTTACAATCCAGAGCATGAAATCAAAAGAGAAAAGCATGTGGATACTACAAGATACCTGCATAAACTCTTACGAGTCGATGGTGGTCTACGCTCCAGTGGATACCACTGGAATGCAGTCCGTGATGACGGGATGCGGCGCGAGCAACATCGCCATATTGCCTTCAGGGTTCTCGATTCTTCCTGATGGGCTGGAGTCGAGGCCGATGGTCATCACATCCAGGCAAGAAGACAGGAGCAGTGAAGGAGGAACTCTGCTGACAGCAGCATTTCAAGTCTTGACAAATTCCTCCCCCACAGGCAAGCTAACAATGGAGTCTGTGGAGTCTGCCAACACACTAATATCATGTACTTTGAGAAATATTAAAGCAAGCTTGCAGTGTGAGGATGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

763

Amino Acids

84.64

Weight (kDa)

5.95

Isoelectric Point (pI)

52.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	109 - 164	3.6e-19	Homeodomain
START	PF01852	278 - 501	5.9e-51	START domain
PDF2_C	PF25797	520 - 759	8.6e-106	PDF2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005711)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79840 AT1G79840 AT1G79840 AT1G79840 AT1G79840 AT1G79840
fragaria_vesca	FvH4_6g31780 FvH4_6g31780 FvH4_6g31780 FvH4_6g31780 FvH4_6g31780 FvH4_6g31780
malus_domestica	MD09G1209300.v1.1 MD17G1191000.v1.1
prunus_persica	Prupe.3G067200_v2.0.a1
pyrus_communis	pycom09g12540 pycom17g19810
rosa_chinensis	RchiOBHm_Chr2g0138951
rosa_laevigata	RLG00000019771
rosa_multiflora	Rmu_sc0001376.1_g000004
rosa_roxburghii	Rroxscaffold_2G00105840
rosa_rugosa	Rorug02G0353500 Rorug02G0353600
rosa_samantha	Rh2AG403500 Rh2BG413900 Rh2CG389600 Rh2DG423700
rosa_wichuraiana	Rw2G032830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	442, 1961
AccI	GTMKAC	2 cut(s)	9, 1983
AccII	CGCG	4 cut(s)	549, 976, 1036, 2036
AclWI	GGATC	2 cut(s)	981, 1035
AcoI	YGGCCR	6 cut(s)	111, 754, 910, 977, 1363, 1554
AcsI	RAATTY	4 cut(s)	257, 458, 514, 2179
AcuI	CTGAAG	2 cut(s)	1737, 2043
AcyI	GRCGYC	1 cut(s)	6
AfaI	GTAC	6 cut(s)	335, 938, 1158, 1217, 1427, 2245
AfiI	CCNNNNNNNGG	8 cut(s)	84, 367, 490, 602, 621, 763, 1372, 1566
AflII	CTTAAG	2 cut(s)	857, 1795
AflIII	ACRYGT	1 cut(s)	12
AgeI	ACCGGT	1 cut(s)	1547
AgsI	TTSAA	7 cut(s)	382, 526, 952, 959, 1545, 1708, 2168
AhlI	ACTAGT	1 cut(s)	1039
AjnI	CCWGG	4 cut(s)	762, 1646, 1714, 2114
AloI	GAACNNNNNNTCC	2 cut(s)	362, 394
Alw21I	GWGCWC	3 cut(s)	1392, 1412, 1785
Alw26I	GTCTC	6 cut(s)	294, 899, 1001, 1131, 1794, 1799
AlwI	GGATC	2 cut(s)	981, 1035
AlwNI	CAGNNNCTG	1 cut(s)	421
Ama87I	CYCGRG	1 cut(s)	725
ApoI	RAATTY	4 cut(s)	257, 458, 514, 2179
ArsI	GACNNNNNNTTYG	2 cut(s)	672, 704
AsiGI	ACCGGT	1 cut(s)	1547
Asp700I	GAANNNNTTC	1 cut(s)	1080
AspLEI	GCGC	3 cut(s)	170, 976, 2036
AspS9I	GGNCC	2 cut(s)	230, 1844
AsuC2I	CCSGG	6 cut(s)	85, 229, 623, 726, 727, 1012
AsuHPI	GGTGA	4 cut(s)	381, 1142, 1324, 1387
AvaI	CYCGRG	1 cut(s)	725
AvaII	GGWCC	1 cut(s)	1844
BalI	TGGCCA	3 cut(s)	756, 1365, 1556
BbsI	GAAGAC	2 cut(s)	204, 2130
Bbv12I	GWGCWC	3 cut(s)	1392, 1412, 1785
BccI	CCATC	7 cut(s)	290, 859, 1775, 1969, 2075, 2095, 2276
BceAI	ACGGC	2 cut(s)	98, 897
BcgI	CGANNNNNNTGC	2 cut(s)	272, 306
BciT130I	CCWGG	4 cut(s)	764, 1648, 1716, 2116
BciVI	GTATCC	2 cut(s)	1932, 1990
BcnI	CCSGG	6 cut(s)	85, 229, 623, 726, 727, 1012
BcoDI	GTCTC	6 cut(s)	294, 899, 1001, 1131, 1794, 1799
BcuI	ACTAGT	1 cut(s)	1039
BfaI	CTAG	6 cut(s)	618, 966, 1040, 1206, 1394, 1451
BfmI	CTRYAG	2 cut(s)	174, 873
BfrI	CTTAAG	2 cut(s)	857, 1795
BfuAI	ACCTGC	2 cut(s)	442, 1961
BfuI	GTATCC	2 cut(s)	1932, 1990
BglII	AGATCT	1 cut(s)	1656
Bme18I	GGWCC	1 cut(s)	1844
BmeT110I	CYCGRG	1 cut(s)	725
BmgT120I	GGNCC	2 cut(s)	230, 1844
BmiI	GGNNCC	2 cut(s)	882, 1200
BmsI	GCATC	7 cut(s)	88, 280, 616, 1291, 1350, 1640, 2018
BpiI	GAAGAC	2 cut(s)	204, 2130
BpmI	CTGGAG	4 cut(s)	985, 1678, 1974, 2108
BpuEI	CTTGAG	1 cut(s)	1645
BpuMI	CCSGG	6 cut(s)	85, 229, 623, 726, 727, 1012
BsaBI	GATNNNNATC	2 cut(s)	1062, 2105
BsaHI	GRCGYC	1 cut(s)	6
BsaI	GGTCTC	1 cut(s)	1001
BsaWI	WCCGGW	1 cut(s)	1547
Bsc4I	CCNNNNNNNGG	8 cut(s)	84, 367, 490, 602, 621, 763, 1372, 1566
Bse118I	RCCGGY	1 cut(s)	1547
Bse1I	ACTGG	4 cut(s)	799, 913, 1991, 2008
Bse3DI	GCAATG	5 cut(s)	570, 852, 976, 1499, 1897
Bse8I	GATNNNNATC	2 cut(s)	1062, 2105
BseBI	CCWGG	4 cut(s)	764, 1648, 1716, 2116
BseGI	GGATG	7 cut(s)	394, 631, 731, 1063, 2033, 2111, 2287
BseJI	GATNNNNATC	2 cut(s)	1062, 2105
BseLI	CCNNNNNNNGG	8 cut(s)	84, 367, 490, 602, 621, 763, 1372, 1566
BseMI	GCAATG	5 cut(s)	570, 852, 976, 1499, 1897
BseMII	CTCAG	3 cut(s)	342, 413, 712
BseNI	ACTGG	4 cut(s)	799, 913, 1991, 2008
BseRI	GAGGAG	2 cut(s)	659, 1764
BseX3I	CGGCCG	1 cut(s)	111
BseYI	CCCAGC	3 cut(s)	61, 101, 1565
BsgI	GTGCAG	1 cut(s)	1173
Bsh1236I	CGCG	4 cut(s)	549, 976, 1036, 2036
Bsh1285I	CGRYCG	2 cut(s)	114, 642
BshTI	ACCGGT	1 cut(s)	1547
BsiEI	CGRYCG	2 cut(s)	114, 642
BsiHKAI	GWGCWC	3 cut(s)	1392, 1412, 1785
BsiHKCI	CYCGRG	1 cut(s)	725
BsiSI	CCGG	7 cut(s)	84, 190, 228, 622, 726, 1011, 1548
BslFI	GGGAC	3 cut(s)	1314, 1688, 1838
BslI	CCNNNNNNNGG	8 cut(s)	84, 367, 490, 602, 621, 763, 1372, 1566
BsmAI	GTCTC	6 cut(s)	294, 899, 1001, 1131, 1794, 1799
BsmBI	CGTCTC	1 cut(s)	1794
BsmFI	GGGAC	3 cut(s)	1314, 1688, 1838
BsmI	GAATGC	3 cut(s)	1403, 1578, 2013
Bso31I	GGTCTC	1 cut(s)	1001
BsoBI	CYCGRG	1 cut(s)	725
Bsp1286I	GDGCHC	3 cut(s)	1392, 1412, 1785
Bsp143I	GATC	7 cut(s)	245, 986, 1027, 1092, 1377, 1656, 1882
BspCNI	CTCAG	3 cut(s)	343, 414, 711
BspFNI	CGCG	4 cut(s)	549, 976, 1036, 2036
BspLI	GGNNCC	2 cut(s)	882, 1200
BspMAI	CTGCAG	1 cut(s)	877
BspMI	ACCTGC	2 cut(s)	442, 1961
BspPI	GGATC	2 cut(s)	981, 1035
BspQI	GCTCTTC	3 cut(s)	846, 1400, 1790
BspTI	CTTAAG	2 cut(s)	857, 1795
BspTNI	GGTCTC	1 cut(s)	1001
BsrDI	GCAATG	5 cut(s)	570, 852, 976, 1499, 1897
BsrFI	RCCGGY	1 cut(s)	1547
BsrI	ACTGG	4 cut(s)	799, 913, 1991, 2008
BssAI	RCCGGY	1 cut(s)	1547
BssMI	GATC	7 cut(s)	245, 986, 1027, 1092, 1377, 1656, 1882
BssNI	GRCGYC	1 cut(s)	6
BssT1I	CCWWGG	4 cut(s)	42, 446, 1194, 1308
Bst2UI	CCWGG	4 cut(s)	764, 1648, 1716, 2116
Bst4CI	ACNGT	3 cut(s)	602, 1049, 1111
Bst6I	CTCTTC	4 cut(s)	317, 846, 1400, 1790
BstACI	GRCGYC	1 cut(s)	6
BstAFI	CTTAAG	2 cut(s)	857, 1795
BstAPI	GCANNNNNTGC	1 cut(s)	655
BstC8I	GCNNGC	9 cut(s)	121, 234, 428, 754, 1235, 2038, 2198, 2266, 2270
BstDEI	CTNAG	4 cut(s)	351, 422, 698, 1653
BstDSI	CCRYGG	1 cut(s)	114
BstF5I	GGATG	7 cut(s)	394, 631, 731, 1063, 2033, 2111, 2287
BstFNI	CGCG	4 cut(s)	549, 976, 1036, 2036
BstHHI	GCGC	3 cut(s)	170, 976, 2036
BstKTI	GATC	7 cut(s)	248, 989, 1030, 1095, 1380, 1659, 1885
BstMAI	GTCTC	6 cut(s)	294, 899, 1001, 1131, 1794, 1799
BstMBI	GATC	7 cut(s)	245, 986, 1027, 1092, 1377, 1656, 1882
BstMCI	CGRYCG	2 cut(s)	114, 642
BstNI	CCWGG	4 cut(s)	764, 1648, 1716, 2116
BstNSI	RCATGY	2 cut(s)	16, 1936
BstSFI	CTRYAG	2 cut(s)	174, 873
BstUI	CGCG	4 cut(s)	549, 976, 1036, 2036
BstV2I	GAAGAC	2 cut(s)	204, 2130
BstX2I	RGATCY	3 cut(s)	986, 1027, 1656
BstYI	RGATCY	3 cut(s)	986, 1027, 1656
BstZI	CGGCCG	1 cut(s)	111
BsuI	GTATCC	2 cut(s)	1932, 1990
BtgI	CCRYGG	1 cut(s)	114
BtgZI	GCGATG	1 cut(s)	2029
BtsCI	GGATG	7 cut(s)	394, 631, 731, 1063, 2033, 2111, 2287
BtsI	GCAGTG	5 cut(s)	187, 606, 1366, 2140, 2279
BtsIMutI	CAGTG	9 cut(s)	187, 348, 606, 792, 1366, 1998, 2001, 2140, 2279
BveI	ACCTGC	2 cut(s)	442, 1961
Cac8I	GCNNGC	9 cut(s)	121, 234, 428, 754, 1235, 2038, 2198, 2266, 2270
CaiI	CAGNNNCTG	1 cut(s)	421
CfoI	GCGC	3 cut(s)	170, 976, 2036
Cfr10I	RCCGGY	1 cut(s)	1547
Cfr13I	GGNCC	2 cut(s)	230, 1844
Cfr9I	CCCGGG	1 cut(s)	725
CseI	GACGC	3 cut(s)	272, 1293, 1316
Csp6I	GTAC	6 cut(s)	334, 937, 1157, 1216, 1426, 2244
CspAI	ACCGGT	1 cut(s)	1547
CspCI	CAANNNNNGTGG	2 cut(s)	1533, 1568
CviQI	GTAC	6 cut(s)	334, 937, 1157, 1216, 1426, 2244
DdeI	CTNAG	4 cut(s)	351, 422, 698, 1653
DpnI	GATC	7 cut(s)	247, 988, 1029, 1094, 1379, 1658, 1884
DpnII	GATC	7 cut(s)	245, 986, 1027, 1092, 1377, 1656, 1882
EaeI	YGGCCR	6 cut(s)	111, 754, 910, 977, 1363, 1554
EagI	CGGCCG	1 cut(s)	111
Eam1104I	CTCTTC	4 cut(s)	317, 846, 1400, 1790
EarI	CTCTTC	4 cut(s)	317, 846, 1400, 1790
EciI	GGCGGA	1 cut(s)	177
EclXI	CGGCCG	1 cut(s)	111
Eco130I	CCWWGG	4 cut(s)	42, 446, 1194, 1308
Eco147I	AGGCCT	2 cut(s)	438, 998
Eco31I	GGTCTC	1 cut(s)	1001
Eco47I	GGWCC	1 cut(s)	1844
Eco52I	CGGCCG	1 cut(s)	111
Eco57I	CTGAAG	2 cut(s)	1737, 2043
Eco88I	CYCGRG	1 cut(s)	725
EcoRII	CCWGG	4 cut(s)	762, 1646, 1714, 2114
EcoT14I	CCWWGG	4 cut(s)	42, 446, 1194, 1308
EcoT22I	ATGCAT	1 cut(s)	1091
ErhI	CCWWGG	4 cut(s)	42, 446, 1194, 1308
Esp3I	CGTCTC	1 cut(s)	1794
FalI	AAGNNNNNCTT	2 cut(s)	35, 67
FaqI	GGGAC	3 cut(s)	1314, 1688, 1838
FblI	GTMKAC	2 cut(s)	9, 1983
FokI	GGATG	6 cut(s)	381, 638, 718, 1070, 2040, 2098
FspBI	CTAG	6 cut(s)	618, 966, 1040, 1206, 1394, 1451
GlaI	GCGC	3 cut(s)	169, 975, 2035
GsaI	CCCAGC	3 cut(s)	65, 105, 1569
GsuI	CTGGAG	4 cut(s)	985, 1678, 1974, 2108
HapII	CCGG	7 cut(s)	84, 190, 228, 622, 726, 1011, 1548
HgaI	GACGC	3 cut(s)	272, 1293, 1316
HhaI	GCGC	3 cut(s)	170, 976, 2036
Hin1I	GRCGYC	1 cut(s)	6
Hin6I	GCGC	3 cut(s)	168, 974, 2034
HinP1I	GCGC	3 cut(s)	168, 974, 2034
HincII	GTYRAC	2 cut(s)	10, 1441
HindII	GTYRAC	2 cut(s)	10, 1441
HindIII	AAGCTT	1 cut(s)	2266
HpaII	CCGG	7 cut(s)	84, 190, 228, 622, 726, 1011, 1548
HphI	GGTGA	4 cut(s)	381, 1142, 1324, 1387
Hpy166II	GTNNAC	5 cut(s)	10, 1045, 1216, 1441, 1984
Hpy188I	TCNGA	9 cut(s)	250, 362, 471, 685, 701, 806, 897, 1419, 1628
Hpy8I	GTNNAC	5 cut(s)	10, 1045, 1216, 1441, 1984
Hpy99I	CGWCG	3 cut(s)	11, 480, 554
HpyAV	CCTTC	8 cut(s)	131, 263, 750, 1066, 1127, 1531, 2067, 2132
HpyCH4III	ACNGT	3 cut(s)	602, 1049, 1111
HpyF3I	CTNAG	4 cut(s)	351, 422, 698, 1653
Hsp92I	GRCGYC	1 cut(s)	6
HspAI	GCGC	3 cut(s)	168, 974, 2034
Kzo9I	GATC	7 cut(s)	245, 986, 1027, 1092, 1377, 1656, 1882
LguI	GCTCTTC	3 cut(s)	846, 1400, 1790
LmnI	GCTCC	9 cut(s)	448, 571, 646, 752, 1387, 1460, 1628, 1993, 2130
LweI	GCATC	7 cut(s)	88, 280, 616, 1291, 1350, 1640, 2018
MaeI	CTAG	6 cut(s)	618, 966, 1040, 1206, 1394, 1451
MaeIII	GTNAC	1 cut(s)	1897
MalI	GATC	7 cut(s)	247, 988, 1029, 1094, 1379, 1658, 1884
MboI	GATC	7 cut(s)	245, 986, 1027, 1092, 1377, 1656, 1882
MfeI	CAATTG	3 cut(s)	1160, 1238, 1857
MflI	RGATCY	3 cut(s)	986, 1027, 1656
MhlI	GDGCHC	3 cut(s)	1392, 1412, 1785
MlsI	TGGCCA	3 cut(s)	756, 1365, 1556
MluNI	TGGCCA	3 cut(s)	756, 1365, 1556
MlyI	GAGTC	7 cut(s)	669, 1252, 1801, 1979, 2099, 2219, 2228
Mox20I	TGGCCA	3 cut(s)	756, 1365, 1556
Mph1103I	ATGCAT	1 cut(s)	1091
MroXI	GAANNNNTTC	1 cut(s)	1080
MscI	TGGCCA	3 cut(s)	756, 1365, 1556
MseI	TTAA	6 cut(s)	858, 924, 1122, 1796, 1835, 2259
MslI	CAYNNNNRTG	2 cut(s)	399, 2006
Msp20I	TGGCCA	3 cut(s)	756, 1365, 1556
MspA1I	CMGCKG	4 cut(s)	153, 173, 206, 752
MspCI	CTTAAG	2 cut(s)	857, 1795
MspI	CCGG	7 cut(s)	84, 190, 228, 622, 726, 1011, 1548
MunI	CAATTG	3 cut(s)	1160, 1238, 1857
Mva1269I	GAATGC	3 cut(s)	1403, 1578, 2013
MvaI	CCWGG	4 cut(s)	764, 1648, 1716, 2116
MvnI	CGCG	4 cut(s)	549, 976, 1036, 2036
NciI	CCSGG	6 cut(s)	85, 229, 623, 726, 727, 1012
NdeII	GATC	7 cut(s)	245, 986, 1027, 1092, 1377, 1656, 1882
NlaIV	GGNNCC	2 cut(s)	882, 1200
NsiI	ATGCAT	1 cut(s)	1091
NspI	RCATGY	2 cut(s)	16, 1936
PceI	AGGCCT	2 cut(s)	438, 998
PciI	ACATGT	1 cut(s)	12
PciSI	GCTCTTC	3 cut(s)	846, 1400, 1790
PctI	GAATGC	3 cut(s)	1403, 1578, 2013
PdmI	GAANNNNTTC	1 cut(s)	1080
PfeI	GAWTC	9 cut(s)	386, 472, 660, 838, 892, 1063, 1355, 1541, 2071
PflFI	GACNNNGTC	1 cut(s)	1283
PinAI	ACCGGT	1 cut(s)	1547
PleI	GAGTC	7 cut(s)	669, 1251, 1801, 1978, 2098, 2218, 2227
PpsI	GAGTC	7 cut(s)	669, 1251, 1801, 1978, 2098, 2218, 2227
PscI	ACATGT	1 cut(s)	12
Psp6I	CCWGG	4 cut(s)	762, 1646, 1714, 2114
PspFI	CCCAGC	3 cut(s)	61, 101, 1565
PspGI	CCWGG	4 cut(s)	762, 1646, 1714, 2114
PspN4I	GGNNCC	2 cut(s)	882, 1200
PspPI	GGNCC	2 cut(s)	230, 1844
PsrI	GAACNNNNNNTAC	2 cut(s)	168, 200
PstI	CTGCAG	1 cut(s)	877
PstNI	CAGNNNCTG	1 cut(s)	421
PsuI	RGATCY	3 cut(s)	986, 1027, 1656
PsyI	GACNNNGTC	1 cut(s)	1283
PvuII	CAGCTG	1 cut(s)	173
RsaI	GTAC	6 cut(s)	335, 938, 1158, 1217, 1427, 2245
RsaNI	GTAC	6 cut(s)	334, 937, 1157, 1216, 1426, 2244
RseI	CAYNNNNRTG	2 cut(s)	399, 2006
SalI	GTCGAC	1 cut(s)	8
SapI	GCTCTTC	3 cut(s)	846, 1400, 1790
SaqAI	TTAA	6 cut(s)	858, 924, 1122, 1796, 1835, 2259
Sau3AI	GATC	7 cut(s)	245, 986, 1027, 1092, 1377, 1656, 1882
Sau96I	GGNCC	2 cut(s)	230, 1844
SchI	GAGTC	7 cut(s)	669, 1252, 1801, 1979, 2099, 2219, 2228
SduI	GDGCHC	3 cut(s)	1392, 1412, 1785
SfaNI	GCATC	7 cut(s)	88, 280, 616, 1291, 1350, 1640, 2018
SfcI	CTRYAG	2 cut(s)	174, 873
SinI	GGWCC	1 cut(s)	1844
SmaI	CCCGGG	1 cut(s)	727
SmiMI	CAYNNNNRTG	2 cut(s)	399, 2006
SmlI	CTYRAG	3 cut(s)	857, 1660, 1795
SmoI	CTYRAG	3 cut(s)	857, 1660, 1795
SpeI	ACTAGT	1 cut(s)	1039
SseBI	AGGCCT	2 cut(s)	438, 998
SspI	AATATT	2 cut(s)	801, 2257
SspMI	CTAG	6 cut(s)	618, 966, 1040, 1206, 1394, 1451
StuI	AGGCCT	2 cut(s)	438, 998
StyI	CCWWGG	4 cut(s)	42, 446, 1194, 1308
TaaI	ACNGT	3 cut(s)	602, 1049, 1111
TaqII	GACCGA	1 cut(s)	656
TatI	WGTACW	4 cut(s)	936, 1156, 1215, 2243
TauI	GCSGC	5 cut(s)	110, 113, 979, 1106, 2034
TfiI	GAWTC	9 cut(s)	386, 472, 660, 838, 892, 1063, 1355, 1541, 2071
Tru1I	TTAA	6 cut(s)	858, 924, 1122, 1796, 1835, 2259
Tru9I	TTAA	6 cut(s)	858, 924, 1122, 1796, 1835, 2259
TscAI	CASTG	9 cut(s)	187, 355, 613, 799, 1373, 1998, 2008, 2140, 2279
TspDTI	ATGAA	6 cut(s)	270, 525, 1042, 1504, 1550, 1928
TspGWI	ACGGA	1 cut(s)	2005
TspMI	CCCGGG	1 cut(s)	725
TspRI	CASTG	9 cut(s)	187, 355, 613, 799, 1373, 1998, 2008, 2140, 2279
Tth111I	GACNNNGTC	1 cut(s)	1283
Vha464I	CTTAAG	2 cut(s)	857, 1795
VpaK11BI	GGWCC	1 cut(s)	1844
XapI	RAATTY	4 cut(s)	257, 458, 514, 2179
XceI	RCATGY	2 cut(s)	16, 1936
XmaI	CCCGGG	1 cut(s)	725
XmiI	GTMKAC	2 cut(s)	9, 1983
XmnI	GAANNNNTTC	1 cut(s)	1080
XspI	CTAG	6 cut(s)	618, 966, 1040, 1206, 1394, 1451
Zsp2I	ATGCAT	1 cut(s)	1091

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.