Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006710

Physical Location & Seq

Genomic Coordinates Forward (+)

30073524 .. 30080778

Gene Structure 7255 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G79950.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3123 bp

ATGGGCTTTACGGTTGTTTCAAGAAGTGGAAGCCCTACAAGGCGGGAAAATCAGAAGAGGCGCGTCTGCTTCCGTCTTCTTCTTCGTCTTCTCCGGAGAGGTTTTGTGGTGTTATCGGCGGAATCCGACCCGAAAATGCCAAATTACAGCATCAGAGGAATCAATGTTGAATTCCCATTCGAGGCGTACCAGTCTCAGATCATATACATGGACAGAGTCATCGAGTCTCTTCAAAACAAATGTCATGCGCTTTTGGAGAGTCCTACGGGAACTGGGAAAACTCTTTGTCTTCTCTGTGCCACCTTAGCCTGGCGAAAGAGTCTGGGCTCTTTCTCAACCCGTAAGGATCGGAAGAACAGTGCCATTCCTTGGTCCGATTCAGACGAGCCTCTGTCACAATCCGGAGGAGGAGGAGGAGGAGCTTTTCCCACCATAGTTTATGCGTCCCGGACTCATAGTCAGCTCCGCCAAGTGATCAAAGAATTAAAAAGAAGTAGCTACAGGCCTAAGATGGTGGTGCTTGGATCACGGGAGCAGTTATGCGTTAATGAGGAAGTCAACTCCCTCCGTGGCAAAGCACTCACTAATGCCTGTCAGTACCTTTGCAAAAAGCGCGGTAAACGCCAATGCAACCATTTCAATCGCCTTCCAGATTATTTGAAGCATAACCCTCATATTGGCGACGAACCTGTTGACATTGAGGATTTGGTCAATATTGGAAAAGATTCTGGACCATGCCCTTATTATATCACAAGAGAGCTTCACAAGGACGTGGACATCATATTTGCACCTTACAACTACTTGATCAGCAATGGGTATAGAAAGTTTTTGAAAGTCAACTGGACTAATAGTGTCCTTATTTTTGATGAAGCGCACAATCTGGAAAGTTTATGCGCAGACTCTGCTTCATTTGACCTTCCTTCTGTTCTTTTATCGGCTTGCATTTCTGAAGCGCAAGAATGTGTACAACTTGCGGCAGCAAGAAGGGATTCATTAAATGACGTTTCCATAAACCCTGAGAATTTTGCTATACTTAAAGGACTGCTTCTTAAGCTGCAGGAACTGATTTCTAAAGTGCCAATTCCCAAAAGGGACGAGGGATTTACCAAGCCTGGGCCTTACATATATGAAATGCTTAAAAGCCTTAACATCACTCACGAAACTGCTCCTAAACTCATTGGTACAGTTGAGGAGGCTGCAGTGTTCCTGGAGGAGGAAAAACAACGAACAGCGACCAACGCTGGAAGCAAACTAGAAATCATTGCTGACATGCTTAAGCTGATCTTTAGAGAAAATGGAAGTAACCATGCAGATGTTTATCGTGTTCATGTACAGGAGCTGGAGCAAAATTCTACTGATGTGATGAAAGGCAAGGTATCAAGAACGCTTAGCTGGTGGTGCTTCAGTCCTGGGATTACCATGCTGGACATAGCACAAAAAGGTGTTGGGTCTATCATTTTAACATCAGGGACCTTGTCTCCCATGGATTCATTGGCTCAAGAACTAAAACTGGACTTTCCCATTCGGTTGGAGAATCCCCATGTTATATCCTCAAATCAGCTATGGGCTGGAGTTGTAAGTACTGGTCCATCAGGGTACGTTCTTAATTCTAGCTACCGCAATCGTGATGTCCCAGAGTACAAACAAGAACTTGGGAATGCCATAGTTAACTTTTCTCGAGTCGTGCCTGAAGGACTGCTGATATTTTTCCCTTCCTATTACCTTATGGACTCTTGCATTACATTTTGGAAAAATGGGTGTTACAGAAACTCAATGACAGTATGGGAAAGAATTTGCAAGCTCAAGAAACCTGTCATTGAACCCAAGGATTCCTCCCTCTTTCCTGCAGCAATGCGGGACTTTTCAGAAAAATTGCAAGACAGAGCAACTTCGGGTGTGGTGTTTTTTGCCGTTTGTCGCGGTAAGGTCAGCGAAGGACTGGATTTTGCTGACGGTGCTGGCAGAGCTGTCGTCATTACTGGGTTACCTTATGCCAGGGTGACAGATCCTAGGGTTAAATTGAAACGAGAGTTTCTGGATGAACAATCACAACTTGCAGATGTTAAGCTTCCAAGATCAACCCTACTATCTGGAAGCATGTGGTACAGTCAAGAAGCCGCACGGGCTGTGAATCAAGCAATTGGACGTGTAATCCGCCATCGTCATGATTATGGAGCTATCATCTTTTGTGATGACAGATTTGAACAACCATCCCAGCAATCCAAGATATCACTTTGGATACGACCTAACGTCAAGTGCTACTCTAGATATGGAGAGGTTATTTCTGACCTTGCTCGATTTTTCCGGACTGAAAGATCAAATTTTCCTGCAAGGCTTGTAACAGAACAAGAGAACAATATAGTTTCAACATTGTTACCAGTGGAATCAATCGAGGATAATCCTACACCAGCCTTTGGTAATAGTAATTTGAAAAACGTTGGGGTTGCACAAAATGAGTTGAGTAGACTGGAAGCGTTTCCTCCTGCAAATCGGGCTTCACCCTTGGAGCGTGACGGAAATAATGTTAAACGGAATGGTTTGACCATTCTTAAACATACAGGCAAGATACCTCGCATTGTAAAGGGAGATGTTATGCAGGGTTGTTCTTCACGGAAGGCTAAGTTGGTGGAACTAAGTGATGATGAGGAGACTCCGGTAGAGAGGAGATGTGAAGTAGTGGATCTAGAAAGCGACAACTGTGAGACGCAGACCTGTGTAACTGAAGTGCTTGCATCAAGCACATGTTTGAACACAATGGGACTAAAAAAAAAGCGAAAGGTTCCAGAGAGTCAGGGAAGTGCATCGTCGTCAGTGTTGACAGCGAAAGGGAATGGAGGTGGTGATAAAAAGGAAGCAAGTGCATCTGCGTTTTTGAGTCAAGTCAAAGAGAAACTCAACACAGAAGAATATAAGAAGTTCATTGGATACATGCAAGCATTGAAGAAGAAGGAGATTAAGTTAGCAAACGTGATGCAGTCCATTGTGCAACTGTTCTGTGGAAGTGAGAGGGATCATCTTCTAATGGGATTCAAAGACTTTGTGCCAGTAAAGTATCGTCCTGCCTACGAGGAATGCATTAAAACGAGAAAAAGACAATCGATCATCTTTGGTAACTCAAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000018 GO:0000723 GO:0000725 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006282 GO:0006298 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009555 GO:0009892 GO:0009987 GO:0010569 GO:0010605 GO:0016043 GO:0019219 GO:0019222 GO:0022622 GO:0031323 GO:0031324 GO:0032200 GO:0032501 GO:0032502 GO:0033554 GO:0034641 GO:0034645 GO:0036297 GO:0042592 GO:0043007 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043570 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044444 GO:0044464 GO:0045005 GO:0045910 GO:0045934 GO:0046483 GO:0048229 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0051276 GO:0051716 GO:0060249 GO:0060255 GO:0065007 GO:0065008 GO:0070716 GO:0071704 GO:0071840 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0099402 GO:1901360 GO:1901576 GO:2000779 GO:2001020

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD_2 Helicase_C_2

Protein Analysis

1040

Amino Acids

116.63

Weight (kDa)

8.99

Isoelectric Point (pI)

45.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD_2	PF06733	147 - 308	3.5e-56	DEAD_2
ARCH_RTEL1	PF23109	313 - 470	4.1e-41	RTEL1 helicase, ARCH domain
Helicase_C_2	PF13307	555 - 749	3.5e-46	Helicase C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006710)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79950 AT1G79950 AT1G79950 AT1G79950 AT1G79950 AT1G79950 AT1G79950
fragaria_vesca	FvH4_6g31180 FvH4_6g31180 FvH4_6g31180 FvH4_6g31180
malus_domestica	MD17G1195000.v1.1
prunus_persica	Prupe.3G071000_v2.0.a1 Prupe.3G071000_v2.0.a1 Prupe.3G071000_v2.0.a1
pyrus_communis	pycom17g20090
rosa_chinensis	RchiOBHm_Chr2g0137871
rosa_laevigata	RLG00000019686
rosa_multiflora	Rmu_sc0002170.1_g000014
rosa_roxburghii	Rroxscaffold_2G00106700
rosa_rugosa	Rorug02G0347600
rosa_samantha	Rh2AG393900 Rh2BG401300 Rh2CG380600 Rh2DG416100
rosa_wichuraiana	Rw2G032240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	895
AccB7I	CCANNNNNTGG	2 cut(s)	369, 2414
AccI	GTMKAC	1 cut(s)	2464
AccII	CGCG	3 cut(s)	63, 615, 1920
AccIII	TCCGGA	3 cut(s)	93, 401, 2304
AclI	AACGTT	1 cut(s)	2436
AclWI	GGATC	5 cut(s)	354, 532, 2000, 2688, 3018
AcsI	RAATTY	5 cut(s)	170, 1021, 1348, 1791, 2320
AcuI	CTGAAG	4 cut(s)	969, 1387, 1710, 2742
AfaI	GTAC	9 cut(s)	188, 599, 966, 1183, 1332, 1582, 1598, 1640, 2105
AfiI	CCNNNNNNNGG	7 cut(s)	181, 309, 369, 677, 1113, 1213, 2414
AflII	CTTAAG	2 cut(s)	1049, 1274
AflIII	ACRYGT	2 cut(s)	2146, 2741
AhdI	GACNNNNNGTC	2 cut(s)	456, 2249
AjiI	CACGTC	2 cut(s)	772, 2147
AjnI	CCWGG	5 cut(s)	308, 1111, 1206, 1408, 1994
AjuI	GAANNNNNNNTTGG	2 cut(s)	2606, 2638
Alw26I	GTCTC	5 cut(s)	198, 231, 1482, 2642, 2696
AlwI	GGATC	5 cut(s)	354, 532, 2000, 2688, 3018
AlwNI	CAGNNNCTG	3 cut(s)	902, 1063, 1339
Ama87I	CYCGRG	1 cut(s)	1677
Aor13HI	TCCGGA	3 cut(s)	93, 401, 2304
AoxI	GGCC	2 cut(s)	503, 1115
ApeKI	GCWGC	4 cut(s)	977, 1054, 1196, 1847
ApoI	RAATTY	5 cut(s)	170, 1021, 1348, 1791, 2320
ArsI	GACNNNNNNTTYG	4 cut(s)	226, 258, 767, 799
Asp700I	GAANNNNTTC	3 cut(s)	724, 988, 2475
AspA2I	CCTAGG	1 cut(s)	2009
AspLEI	GCGC	6 cut(s)	63, 250, 615, 874, 896, 955
AspS9I	GGNCC	5 cut(s)	372, 731, 1115, 1470, 1586
AsuC2I	CCSGG	1 cut(s)	448
AsuHPI	GGTGA	3 cut(s)	2011, 2490, 2852
AvaI	CYCGRG	1 cut(s)	1677
AvaII	GGWCC	4 cut(s)	372, 731, 1470, 1586
AvrII	CCTAGG	1 cut(s)	2009
BanII	GRGCYC	1 cut(s)	329
BbsI	GAAGAC	3 cut(s)	68, 80, 281
BbvI	GCAGC	4 cut(s)	989, 1041, 1183, 1859
BccI	CCATC	4 cut(s)	505, 1597, 2166, 2218
BceAI	ACGGC	1 cut(s)	1895
BcgI	CGANNNNNNTGC	2 cut(s)	1951, 1985
BciT130I	CCWGG	5 cut(s)	310, 1113, 1208, 1410, 1996
BciVI	GTATCC	2 cut(s)	2232, 2918
BclI	TGATCA	2 cut(s)	474, 804
BcnI	CCSGG	1 cut(s)	448
BcoDI	GTCTC	5 cut(s)	198, 231, 1482, 2642, 2696
BfaI	CTAG	5 cut(s)	1253, 1611, 2010, 2265, 2684
BfmI	CTRYAG	4 cut(s)	499, 1055, 1197, 1845
BfrI	CTTAAG	2 cut(s)	1049, 1274
BfuI	GTATCC	2 cut(s)	2232, 2918
BglI	GCCNNNNNGGC	1 cut(s)	2123
BisI	GCNGC	6 cut(s)	975, 978, 1055, 1197, 1848, 2118
BlnI	CCTAGG	1 cut(s)	2009
BlpI	GCTNAGC	1 cut(s)	1388
BlsI	GCNGC	6 cut(s)	976, 979, 1056, 1198, 1849, 2119
BmcAI	AGTACT	1 cut(s)	1582
Bme1390I	CCNGG	6 cut(s)	310, 448, 1113, 1208, 1410, 1996
Bme18I	GGWCC	4 cut(s)	372, 731, 1470, 1586
BmeRI	GACNNNNNGTC	2 cut(s)	456, 2249
BmeT110I	CYCGRG	1 cut(s)	1677
BmgBI	CACGTC	2 cut(s)	772, 2147
BmgT120I	GGNCC	5 cut(s)	372, 731, 1115, 1470, 1586
BmiI	GGNNCC	2 cut(s)	1471, 2781
BmrFI	CCNGG	6 cut(s)	310, 448, 1113, 1208, 1410, 1996
BmrI	ACTGGG	2 cut(s)	282, 1989
BmsI	GCATC	5 cut(s)	159, 2741, 2810, 2870, 2961
BmuI	ACTGGG	2 cut(s)	282, 1989
BpiI	GAAGAC	3 cut(s)	68, 80, 281
BpmI	CTGGAG	3 cut(s)	1229, 1361, 1590
Bpu10I	CCTNAGC	1 cut(s)	304
Bpu1102I	GCTNAGC	1 cut(s)	1388
BpuEI	CTTGAG	2 cut(s)	1482, 1787
BpuMI	CCSGG	1 cut(s)	448
Bsa29I	ATCGAT	1 cut(s)	3098
BsaBI	GATNNNNATC	1 cut(s)	1317
BsaJI	CCNNGG	9 cut(s)	368, 568, 1112, 1409, 1482, 1824, 1995, 2009, 2502
BsaWI	WCCGGW	4 cut(s)	93, 401, 2304, 2653
BsaXI	ACNNNNNCTCC	4 cut(s)	1462, 1492, 2942, 2972
Bsc4I	CCNNNNNNNGG	7 cut(s)	181, 309, 369, 677, 1113, 1213, 2414
Bse3DI	GCAATG	3 cut(s)	817, 1260, 1857
Bse8I	GATNNNNATC	1 cut(s)	1317
BseAI	TCCGGA	3 cut(s)	93, 401, 2304
BseBI	CCWGG	5 cut(s)	310, 1113, 1208, 1410, 1996
BseCI	ATCGAT	1 cut(s)	3098
BseDI	CCNNGG	9 cut(s)	368, 568, 1112, 1409, 1482, 1824, 1995, 2009, 2502
BseGI	GGATG	2 cut(s)	2044, 2210
BseJI	GATNNNNATC	1 cut(s)	1317
BseLI	CCNNNNNNNGG	7 cut(s)	181, 309, 369, 677, 1113, 1213, 2414
BseMI	GCAATG	3 cut(s)	817, 1260, 1857
BseMII	CTCAG	2 cut(s)	209, 1008
BseRI	GAGGAG	9 cut(s)	420, 423, 426, 429, 432, 1205, 1226, 2660, 2677
BseXI	GCAGC	4 cut(s)	989, 1041, 1183, 1859
BseYI	CCCAGC	1 cut(s)	2214
Bsh1236I	CGCG	3 cut(s)	63, 615, 1920
BshFI	GGCC	2 cut(s)	505, 1117
BshVI	ATCGAT	1 cut(s)	3098
BsiHKCI	CYCGRG	1 cut(s)	1677
BsiSI	CCGG	5 cut(s)	94, 402, 448, 2305, 2654
BslFI	GGGAC	6 cut(s)	430, 1106, 1483, 1616, 1871, 2772
BslI	CCNNNNNNNGG	7 cut(s)	181, 309, 369, 677, 1113, 1213, 2414
BsmAI	GTCTC	5 cut(s)	198, 231, 1482, 2642, 2696
BsmBI	CGTCTC	1 cut(s)	2696
BsmFI	GGGAC	6 cut(s)	430, 1106, 1483, 1616, 1871, 2772
BsmI	GAATGC	2 cut(s)	1663, 3077
BsnI	GGCC	2 cut(s)	505, 1117
BsoBI	CYCGRG	1 cut(s)	1677
Bsp1286I	GDGCHC	1 cut(s)	329
Bsp13I	TCCGGA	3 cut(s)	93, 401, 2304
Bsp1407I	TGTACA	2 cut(s)	964, 1330
Bsp1720I	GCTNAGC	1 cut(s)	1388
Bsp19I	CCATGG	1 cut(s)	1482
BspANI	GGCC	2 cut(s)	505, 1117
BspCNI	CTCAG	2 cut(s)	208, 1009
BspDI	ATCGAT	1 cut(s)	3098
BspEI	TCCGGA	3 cut(s)	93, 401, 2304
BspFNI	CGCG	3 cut(s)	63, 615, 1920
BspHI	TCATGA	1 cut(s)	2164
BspLI	GGNNCC	2 cut(s)	1471, 2781
BspMAI	CTGCAG	3 cut(s)	1059, 1201, 1849
BspPI	GGATC	5 cut(s)	354, 532, 2000, 2688, 3018
BspTI	CTTAAG	2 cut(s)	1049, 1274
BsrDI	GCAATG	3 cut(s)	817, 1260, 1857
BsrGI	TGTACA	2 cut(s)	964, 1330
BssECI	CCNNGG	9 cut(s)	368, 568, 1112, 1409, 1482, 1824, 1995, 2009, 2502
BssT1I	CCWWGG	5 cut(s)	368, 1482, 1824, 2009, 2502
Bst2UI	CCWGG	5 cut(s)	310, 1113, 1208, 1410, 1996
Bst4CI	ACNGT	8 cut(s)	13, 359, 1186, 1780, 1955, 2108, 2699, 2991
Bst6I	CTCTTC	2 cut(s)	50, 234
BstAFI	CTTAAG	2 cut(s)	1049, 1274
BstAPI	GCANNNNNTGC	1 cut(s)	902
BstAUI	TGTACA	2 cut(s)	964, 1330
BstC8I	GCNNGC	5 cut(s)	940, 1799, 1960, 2730, 2934
BstDEI	CTNAG	7 cut(s)	195, 304, 507, 1017, 1388, 2619, 2633
BstDSI	CCRYGG	2 cut(s)	568, 1482
BstEII	GGTNACC	1 cut(s)	1983
BstENI	CCTNNNNNAGG	1 cut(s)	1211
BstF5I	GGATG	2 cut(s)	2044, 2210
BstFNI	CGCG	3 cut(s)	63, 615, 1920
BstHHI	GCGC	6 cut(s)	63, 250, 615, 874, 896, 955
BstMAI	GTCTC	5 cut(s)	198, 231, 1482, 2642, 2696
BstNI	CCWGG	5 cut(s)	310, 1113, 1208, 1410, 1996
BstNSI	RCATGY	4 cut(s)	1273, 2101, 2745, 2932
BstPI	GGTNACC	1 cut(s)	1983
BstSCI	CCNGG	6 cut(s)	308, 446, 1111, 1206, 1408, 1994
BstSFI	CTRYAG	4 cut(s)	499, 1055, 1197, 1845
BstUI	CGCG	3 cut(s)	63, 615, 1920
BstV1I	GCAGC	4 cut(s)	989, 1041, 1183, 1859
BstV2I	GAAGAC	3 cut(s)	68, 80, 281
BstX2I	RGATCY	2 cut(s)	2005, 2680
BstXI	CCANNNNNNTGG	1 cut(s)	1528
BstYI	RGATCY	2 cut(s)	2005, 2680
Bsu15I	ATCGAT	1 cut(s)	3098
BsuI	GTATCC	2 cut(s)	2232, 2918
BsuRI	GGCC	2 cut(s)	505, 1117
BsuTUI	ATCGAT	1 cut(s)	3098
BtgI	CCRYGG	2 cut(s)	568, 1482
BtrI	CACGTC	2 cut(s)	772, 2147
BtsCI	GGATG	2 cut(s)	2044, 2210
BtsI	GCAGTG	1 cut(s)	1206
BtsIMutI	CAGTG	4 cut(s)	364, 1206, 2385, 2817
Cac8I	GCNNGC	5 cut(s)	940, 1799, 1960, 2730, 2934
CaiI	CAGNNNCTG	3 cut(s)	902, 1063, 1339
CciI	TCATGA	1 cut(s)	2164
CfoI	GCGC	6 cut(s)	63, 250, 615, 874, 896, 955
Cfr13I	GGNCC	5 cut(s)	372, 731, 1115, 1470, 1586
ClaI	ATCGAT	1 cut(s)	3098
CseI	GACGC	3 cut(s)	52, 432, 2713
Csp6I	GTAC	9 cut(s)	187, 598, 965, 1182, 1331, 1581, 1597, 1639, 2104
CviQI	GTAC	9 cut(s)	187, 598, 965, 1182, 1331, 1581, 1597, 1639, 2104
DdeI	CTNAG	7 cut(s)	195, 304, 507, 1017, 1388, 2619, 2633
DriI	GACNNNNNGTC	2 cut(s)	456, 2249
Eam1104I	CTCTTC	2 cut(s)	50, 234
Eam1105I	GACNNNNNGTC	2 cut(s)	456, 2249
EarI	CTCTTC	2 cut(s)	50, 234
EciI	GGCGGA	3 cut(s)	134, 455, 2144
Eco130I	CCWWGG	5 cut(s)	368, 1482, 1824, 2009, 2502
Eco147I	AGGCCT	1 cut(s)	505
Eco24I	GRGCYC	1 cut(s)	329
Eco32I	GATATC	1 cut(s)	2229
Eco47I	GGWCC	4 cut(s)	372, 731, 1470, 1586
Eco57I	CTGAAG	4 cut(s)	969, 1387, 1710, 2742
Eco88I	CYCGRG	1 cut(s)	1677
Eco91I	GGTNACC	1 cut(s)	1983
EcoNI	CCTNNNNNAGG	1 cut(s)	1211
EcoO109I	RGGNCCY	1 cut(s)	1470
EcoO65I	GGTNACC	1 cut(s)	1983
EcoRI	GAATTC	1 cut(s)	170
EcoRII	CCWGG	5 cut(s)	308, 1111, 1206, 1408, 1994
EcoRV	GATATC	1 cut(s)	2229
EcoT14I	CCWWGG	5 cut(s)	368, 1482, 1824, 2009, 2502
EcoT22I	ATGCAT	1 cut(s)	3077
EcoT38I	GRGCYC	1 cut(s)	329
ErhI	CCWWGG	5 cut(s)	368, 1482, 1824, 2009, 2502
Esp3I	CGTCTC	1 cut(s)	2696
FalI	AAGNNNNNCTT	4 cut(s)	1029, 1061, 1268, 1300
FaqI	GGGAC	6 cut(s)	430, 1106, 1483, 1616, 1871, 2772
FauI	CCCGC	2 cut(s)	36, 1848
FbaI	TGATCA	2 cut(s)	474, 804
FblI	GTMKAC	1 cut(s)	2464
Fnu4HI	GCNGC	6 cut(s)	975, 978, 1055, 1197, 1848, 2118
FokI	GGATG	2 cut(s)	2051, 2197
FriOI	GRGCYC	1 cut(s)	329
Fsp4HI	GCNGC	6 cut(s)	975, 978, 1055, 1197, 1848, 2118
FspBI	CTAG	5 cut(s)	1253, 1611, 2010, 2265, 2684
FspI	TGCGCA	1 cut(s)	895
GlaI	GCGC	6 cut(s)	62, 249, 614, 873, 895, 954
GluI	GCNGC	6 cut(s)	975, 978, 1055, 1197, 1848, 2118
GsaI	CCCAGC	1 cut(s)	2218
GsuI	CTGGAG	3 cut(s)	1229, 1361, 1590
HaeIII	GGCC	2 cut(s)	505, 1117
HapII	CCGG	5 cut(s)	94, 402, 448, 2305, 2654
HgaI	GACGC	3 cut(s)	52, 432, 2713
HhaI	GCGC	6 cut(s)	63, 250, 615, 874, 896, 955
Hin6I	GCGC	6 cut(s)	61, 248, 613, 872, 894, 953
HinP1I	GCGC	6 cut(s)	61, 248, 613, 872, 894, 953
HincII	GTYRAC	5 cut(s)	559, 694, 838, 1669, 2817
HindII	GTYRAC	5 cut(s)	559, 694, 838, 1669, 2817
HindIII	AAGCTT	1 cut(s)	2066
HpaI	GTTAAC	1 cut(s)	1669
HpaII	CCGG	5 cut(s)	94, 402, 448, 2305, 2654
HphI	GGTGA	3 cut(s)	2011, 2490, 2852
Hpy166II	GTNNAC	9 cut(s)	559, 620, 694, 775, 838, 965, 1669, 2465, 2817
Hpy8I	GTNNAC	9 cut(s)	559, 620, 694, 775, 838, 965, 1669, 2465, 2817
Hpy99I	CGWCG	2 cut(s)	686, 2809
HpyAV	CCTTC	9 cut(s)	656, 926, 930, 978, 1685, 1722, 1928, 2608, 2941
HpyCH4III	ACNGT	8 cut(s)	13, 359, 1186, 1780, 1955, 2108, 2699, 2991
HpyCH4IV	ACGT	7 cut(s)	771, 1002, 1599, 2146, 2250, 2436, 2967
HpyF3I	CTNAG	7 cut(s)	195, 304, 507, 1017, 1388, 2619, 2633
HpySE526I	ACGT	7 cut(s)	771, 1002, 1599, 2146, 2250, 2436, 2967
HspAI	GCGC	6 cut(s)	61, 248, 613, 872, 894, 953
Kpn2I	TCCGGA	3 cut(s)	93, 401, 2304
Ksp22I	TGATCA	2 cut(s)	474, 804
KspAI	GTTAAC	1 cut(s)	1669
LmnI	GCTCC	8 cut(s)	419, 468, 532, 1171, 1336, 1342, 2174, 2506
Lsp1109I	GCAGC	4 cut(s)	989, 1041, 1183, 1859
LweI	GCATC	5 cut(s)	159, 2741, 2810, 2870, 2961
MaeI	CTAG	5 cut(s)	1253, 1611, 2010, 2265, 2684
MaeII	ACGT	7 cut(s)	771, 1002, 1599, 2146, 2250, 2436, 2967
MfeI	CAATTG	1 cut(s)	2139
MflI	RGATCY	2 cut(s)	2005, 2680
MhlI	GDGCHC	1 cut(s)	329
MmeI	TCCRAC	2 cut(s)	150, 1509
Mph1103I	ATGCAT	1 cut(s)	3077
MroI	TCCGGA	3 cut(s)	93, 401, 2304
MroXI	GAANNNNTTC	3 cut(s)	724, 988, 2475
MslI	CAYNNNNRTG	4 cut(s)	206, 1311, 2163, 2169
MspCI	CTTAAG	2 cut(s)	1049, 1274
MspI	CCGG	5 cut(s)	94, 402, 448, 2305, 2654
MspR9I	CCNGG	6 cut(s)	310, 448, 1113, 1208, 1410, 1996
MunI	CAATTG	1 cut(s)	2139
Mva1269I	GAATGC	2 cut(s)	1663, 3077
MvaI	CCWGG	5 cut(s)	310, 1113, 1208, 1410, 1996
MvnI	CGCG	3 cut(s)	63, 615, 1920
NciI	CCSGG	1 cut(s)	448
NcoI	CCATGG	1 cut(s)	1482
NlaIV	GGNNCC	2 cut(s)	1471, 2781
NmuCI	GTSAC	3 cut(s)	393, 1999, 2510
NsbI	TGCGCA	1 cut(s)	895
NsiI	ATGCAT	1 cut(s)	3077
NspI	RCATGY	4 cut(s)	1273, 2101, 2745, 2932
PaeR7I	CTCGAG	1 cut(s)	1677
PagI	TCATGA	1 cut(s)	2164
PceI	AGGCCT	1 cut(s)	505
PciI	ACATGT	1 cut(s)	2741
PctI	GAATGC	2 cut(s)	1663, 3077
PdmI	GAANNNNTTC	3 cut(s)	724, 988, 2475
PflFI	GACNNNGTC	2 cut(s)	215, 1474
PflMI	CCANNNNNTGG	2 cut(s)	369, 2414
PfoI	TCCNGGA	2 cut(s)	446, 1206
PkrI	GCNGC	6 cut(s)	976, 979, 1056, 1198, 1849, 2119
PpuMI	RGGWCCY	1 cut(s)	1470
PscI	ACATGT	1 cut(s)	2741
Psp1406I	AACGTT	1 cut(s)	2436
Psp5II	RGGWCCY	1 cut(s)	1470
Psp6I	CCWGG	5 cut(s)	308, 1111, 1206, 1408, 1994
PspEI	GGTNACC	1 cut(s)	1983
PspFI	CCCAGC	1 cut(s)	2214
PspGI	CCWGG	5 cut(s)	308, 1111, 1206, 1408, 1994
PspN4I	GGNNCC	2 cut(s)	1471, 2781
PspPI	GGNCC	5 cut(s)	372, 731, 1115, 1470, 1586
PspPPI	RGGWCCY	1 cut(s)	1470
PstI	CTGCAG	3 cut(s)	1059, 1201, 1849
PstNI	CAGNNNCTG	3 cut(s)	902, 1063, 1339
PsuI	RGATCY	2 cut(s)	2005, 2680
PsyI	GACNNNGTC	2 cut(s)	215, 1474
RsaI	GTAC	9 cut(s)	188, 599, 966, 1183, 1332, 1582, 1598, 1640, 2105
RsaNI	GTAC	9 cut(s)	187, 598, 965, 1182, 1331, 1581, 1597, 1639, 2104
RseI	CAYNNNNRTG	4 cut(s)	206, 1311, 2163, 2169
SatI	GCNGC	6 cut(s)	975, 978, 1055, 1197, 1848, 2118
Sau96I	GGNCC	5 cut(s)	372, 731, 1115, 1470, 1586
ScaI	AGTACT	1 cut(s)	1582
ScrFI	CCNGG	6 cut(s)	310, 448, 1113, 1208, 1410, 1996
SduI	GDGCHC	1 cut(s)	329
SfaNI	GCATC	5 cut(s)	159, 2741, 2810, 2870, 2961
SfcI	CTRYAG	4 cut(s)	499, 1055, 1197, 1845
Sfr274I	CTCGAG	1 cut(s)	1677
SinI	GGWCC	4 cut(s)	372, 731, 1470, 1586
SlaI	CTCGAG	1 cut(s)	1677
SmiMI	CAYNNNNRTG	4 cut(s)	206, 1311, 2163, 2169
SmlI	CTYRAG	5 cut(s)	1049, 1274, 1497, 1677, 1802
SmoI	CTYRAG	5 cut(s)	1049, 1274, 1497, 1677, 1802
SseBI	AGGCCT	1 cut(s)	505
SspI	AATATT	1 cut(s)	715
SspMI	CTAG	5 cut(s)	1253, 1611, 2010, 2265, 2684
StuI	AGGCCT	1 cut(s)	505
StyD4I	CCNGG	6 cut(s)	308, 446, 1111, 1206, 1408, 1994
StyI	CCWWGG	5 cut(s)	368, 1482, 1824, 2009, 2502
TaaI	ACNGT	8 cut(s)	13, 359, 1186, 1780, 1955, 2108, 2699, 2991
TaiI	ACGT	7 cut(s)	774, 1005, 1602, 2149, 2253, 2439, 2970
TaqI	TCGA	6 cut(s)	180, 222, 1678, 2296, 2391, 3098
TatI	WGTACW	4 cut(s)	964, 1330, 1580, 1638
TauI	GCSGC	2 cut(s)	977, 2120
TscAI	CASTG	4 cut(s)	364, 1206, 2385, 2817
TseFI	GTSAC	3 cut(s)	393, 1999, 2510
TseI	GCWGC	4 cut(s)	977, 1054, 1196, 1847
Tsp45I	GTSAC	3 cut(s)	393, 1999, 2510
TspDTI	ATGAA	9 cut(s)	882, 897, 981, 1143, 1316, 1379, 1479, 2055, 2908
TspGWI	ACGGA	5 cut(s)	62, 557, 2529, 2545, 2626
TspRI	CASTG	4 cut(s)	364, 1206, 2385, 2817
Tth111I	GACNNNGTC	2 cut(s)	215, 1474
Van91I	CCANNNNNTGG	2 cut(s)	369, 2414
Vha464I	CTTAAG	2 cut(s)	1049, 1274
VpaK11BI	GGWCC	4 cut(s)	372, 731, 1470, 1586
XagI	CCTNNNNNAGG	1 cut(s)	1211
XapI	RAATTY	5 cut(s)	170, 1021, 1348, 1791, 2320
XbaI	TCTAGA	2 cut(s)	2264, 2683
XceI	RCATGY	4 cut(s)	1273, 2101, 2745, 2932
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1489
XhoI	CTCGAG	1 cut(s)	1677
XmaJI	CCTAGG	1 cut(s)	2009
XmiI	GTMKAC	1 cut(s)	2464
XmnI	GAANNNNTTC	3 cut(s)	724, 988, 2475
XspI	CTAG	5 cut(s)	1253, 1611, 2010, 2265, 2684
ZrmI	AGTACT	1 cut(s)	1582
Zsp2I	ATGCAT	1 cut(s)	3077

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.