Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0006710

Physical Location & Seq

Genomic Coordinates Reverse (-)

5084644 .. 5100908

Gene Structure 16265 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G071000.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3228 bp

ATGCCGACGTACAACATCAGAGGCATCGATGTGGATTTCCCATTCGAAGCCTACGATTGCCAGCTCGTTTACATGGAGAAAGTCATCCAATCTCTCCAAGAAAGAAGTAATGCACTGCTGGAGAGTCCCACTGGAACTGGAAAAACCCTTTGTCTTCTCTGTGCCACATTGGCCTGGAGGAAGAGTTTGGGTGTTTTCTCAACTGGTCCTAATGTCAAGATGAGTCAGATCACAGGAGAAAAATCAGGTGTTCCGTTGTCACAGTCCGCGACAAAAGATCTTCCTACCATAATATATGCATCCCGCACTCACAGCCAGATCCGGCAAGTAATTAAAGAGTTGAAAAGAAGCTCTTACAGGCCGAAAATGGTAGTGTTGGGGTCTCGAGAACAATTATGCATTAATGAGGAAGTGAGTTTACTACGCGGAAGAACACAGACAAAGGCTTGCCATTTCCTCTGCCGGCGCACTAAGGAAACAAAGGATAAAAAGCGTCATTGTGCTCATTATTCTCGTGGTTCTGGTTACTTAAAGAATAATCCTCATCTTGGAGATGAACCTATTGATATCGAGGATTTGGTGAATACTGGAAGAAAATTAGGGCCGTGTCCTTATTATTTATCAAGGGAACTCCATAAGGTTGTTGATATATTATTTGCACCTTATAACTATCTTATTGATCATGGGTATAGAAAATCGCTACAGATAGATTGGAAAAACAGTATTCTCATATTCGACGAAGCTCACAACCTGGAAAGCATATGCGCAGATGCAGCTTCCTTTGACTTGCCTTCTTGGCTTCTTACAGCTTGCACTTCTGAAGCGAAAAATTGTATTGACCTTTCTATGAAAAGAAGGGAAGAATCAACCGATAAATCACAGAATCCAGATGACTTTGCAATTCTCAGAGCGCTTCTTTTGAAGCTTGAGAAGCGTATTTCTGAAGTGCCTATCGAATCCAAGGAATTGGGATACACTAAGCCTGGGCCTTATATCTATGAACTCCTGGCTGAATTAAACATCACACAGGATACTGTCCCTAAGCTCATTAAAATACTTGAGGATGCTACTGTACTTATGGAGGAAGAAAATCAGAACAAGGCAAATCGAAGTGTCTGCCGGCTGGAAAGCATTAGTGACATGTTTAATTTAATTTTCAGAGATACAGACAATAACCATGCAAAATCCTATCGTGTTCATGTACAAGAAGTTGAAGCAGCCGCAATTGATGGTTTAAAGGGTAAGGCATCTAGGACACTCAGCTGGTGGTGTTTTCATCCTGGAATTGCAATGGAAGAATTCGCCAAGATGAATGTGGGCTCTATTATACTGACATCTGGCACATTATCTCCCTTGGATTCATTTGCACAGGAACTGAAACTAGAGTTCCCTGTGCGGTTGGAAAACCCTCATGTTATTACCCCGAATCAGATATGGGCTGGAGTTGTACCAGCTGGACCTTCTGGTTTCTCTTTCAACTCCTCTTATAGAAATCGTGATTCTCTGGAGTACAAACGGGACCTTGGAAATGCCATTGTCAATTTTGCTCGAATCGTTCCCGATGGATTGCTTGTATTCTTTCCGTCTTACTACATTTTGGACCAATGCATTGCCTGCTGGAAGAATACGAGCCATGCCAATTCAACTACAATATGGGAAAGAATCTCCAAACATAAGAAACCTGTTGTAGAACCTAGACAATCTTCATTGTTTCTTTTGTCAATTGAGGACTATATGGCTAAGCTGAAGGACACCTCAGCTTCTGGTGCAGTATTTTTTGCTGTTTGCCGTGGTAAGGTAAGTGAAGGACTAGATTTTGCTGATCACGCTGGAAGGGCTGTAGTCATTACTGGTCTACCGTTTGCCACAAGGAATGATCCTAAGGTTCGTCTGAAACGTGAATACTTGGATCAGCAGGCATATTCCCAGAGGCAAGTATGTAAGTTGGAGGTTTTGACTGGAGAAGACTGGTACAATCAACAAGCATTACGAGCTGTAAATCAGGCTGTTGGACGTGTAATCCGTCATCGTCATGATTATGGAGCAATTATTTTTTGTGATGAAAGGTTTGCACAACCAAATCGTCAATCTCAAATATCGCTCTGGATACAACCTCATATAAAGTGTTACTCCAAATTTGGGGATGTAATTTTTTCGTTGACCCGTTTCTTTCGGGATGGAGGAGCTCGGGGTCCTACAAAGCTGAAGTTGTTACAAACTGAAAAATGGGATGCAATTTCTACATCAAATTCAGTACTTGATGAGCAGACAAATGAAGCCCCGTTCGATCATAAACCATATTCTGTAGGTTCATCAACCTCAGTTCATGGAACATCTGGGAAAATATATGAGTTGAAAACTGAGCAACCTCCAGAAAAACTTTATCTGGATAAATTTCTCCCTCCGACAACAGCAGTCAGTCAAGACAGCCTTGTAAAGTCATCTTCTTCCCTACTAAAAGCTGGCAGGGACAAACTTTCAAGCCTGTTAGGGGAAGTTCTTCCTGCCAATCGCTCATCTCTTACTTCCTGTAAGGATCAGTCTGTGTCATTGAAGTGTTCAAATAATCTATTCCGAAATGAGAAAAAGCTGCTTATTTGTGAGAGGGAAACTCTGCAATGTCAAGATAGTAAAGTATTTGGTTTTCCTGGCAAAAATGAGAAACAAGGCGAAGAACTAATAACACCTTGCTCTGCAAAAAGGTGTAAATTAAGCACAGAGCATGACTCAGTACATCTTATTGACAACTCTAATAAGCATTCATCTCTTGCAAAAGATTCTGATTCATATGGTGGTTTTCCCAATATTAATCTGAGAAGTGAGAGTTCACATATATCTGACAGTTCAAGTTCACAAAATGCCCAAGTTGGTTCAGCATTGCTGCGTAAAGACAAGAGGATCATACAACAGGGAGATGCTGAGTTTCTGAGTAACAAAAACAAAAGTGCAATATCCATCCCTGTGCTTTCTGGTGATAAGGAAACCAGAGGATCTGAGTTTCTAGTTCAGGTTGAAGAAAAACTTAGCACTTTGGAATATAAAGAATTTGTAAATTTGATGAAGGCACTTAAGTCCAAAGCTATGAAGATGAATGAAGTTTTACAATCCATTGCAAGCCTGTTTTCCGGACGAGAGAGGCTTCCTCTTCTTAAAAGATTTAAGGATTTTATCCCAGTAAAGTATCACTCTATGTATGAGCACTATTTTCAAACAAATGACGGGCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000018 GO:0000723 GO:0000725 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006282 GO:0006298 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009555 GO:0009892 GO:0009987 GO:0010569 GO:0010605 GO:0016043 GO:0019219 GO:0019222 GO:0022622 GO:0031323 GO:0031324 GO:0032200 GO:0032501 GO:0032502 GO:0033554 GO:0034641 GO:0034645 GO:0036297 GO:0042592 GO:0043007 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043570 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044444 GO:0044464 GO:0045005 GO:0045910 GO:0045934 GO:0046483 GO:0048229 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0051276 GO:0051716 GO:0060249 GO:0060255 GO:0065007 GO:0065008 GO:0070716 GO:0071704 GO:0071840 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0099402 GO:1901360 GO:1901576 GO:2000779 GO:2001020

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD_2 Helicase_C_2

Protein Analysis

1076

Amino Acids

121.23

Weight (kDa)

8.7

Isoelectric Point (pI)

46.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006710)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79950 AT1G79950 AT1G79950 AT1G79950 AT1G79950 AT1G79950 AT1G79950
fragaria_vesca	FvH4_6g31180 FvH4_6g31180 FvH4_6g31180 FvH4_6g31180
malus_domestica	MD17G1195000.v1.1
prunus_persica	Prupe.3G071000_v2.0.a1 Prupe.3G071000_v2.0.a1 Prupe.3G071000_v2.0.a1
pyrus_communis	pycom17g20090
rosa_chinensis	RchiOBHm_Chr2g0137871
rosa_laevigata	RLG00000019686
rosa_multiflora	Rmu_sc0002170.1_g000014
rosa_roxburghii	Rroxscaffold_2G00106700
rosa_rugosa	Rorug02G0347600
rosa_samantha	Rh2AG393900 Rh2BG401300 Rh2CG380600 Rh2DG416100
rosa_wichuraiana	Rw2G032240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	666
Acc16I	TGCGCA	1 cut(s)	766
AccI	GTMKAC	1 cut(s)	1855
AccII	CGCG	2 cut(s)	269, 426
AccIII	TCCGGA	1 cut(s)	3125
AciI	CCGC	5 cut(s)	267, 304, 426, 1221, 1396
AclWI	GGATC	6 cut(s)	313, 1871, 1917, 2544, 2906, 2998
AcsI	RAATTY	6 cut(s)	1298, 2135, 2248, 2393, 3044, 3052
AcuI	CTGAAG	4 cut(s)	840, 963, 1766, 2225
AfaI	GTAC	8 cut(s)	11, 1074, 1203, 1449, 1511, 1973, 2256, 2733
AfeI	AGCGCT	1 cut(s)	912
AfiI	CCNNNNNNNGG	4 cut(s)	548, 1795, 2139, 2491
AflII	CTTAAG	1 cut(s)	3068
AflIII	ACRYGT	2 cut(s)	1140, 2014
AjiI	CACGTC	1 cut(s)	2015
AjnI	CCWGG	6 cut(s)	173, 750, 982, 1005, 1279, 2647
Alw21I	GWGCWC	3 cut(s)	505, 2188, 3201
Alw26I	GTCTC	1 cut(s)	387
AlwI	GGATC	6 cut(s)	313, 1871, 1917, 2544, 2906, 2998
AlwNI	CAGNNNCTG	2 cut(s)	1375, 1763
Ama87I	CYCGRG	2 cut(s)	384, 2187
Aor13HI	TCCGGA	1 cut(s)	3125
Aor51HI	AGCGCT	1 cut(s)	912
AoxI	GGCC	4 cut(s)	171, 359, 602, 986
ApeKI	GCWGC	4 cut(s)	773, 1217, 2590, 2881
ApoI	RAATTY	6 cut(s)	1298, 2135, 2248, 2393, 3044, 3052
AseI	ATTAAT	2 cut(s)	402, 2808
Asp700I	GAANNNNTTC	1 cut(s)	2499
AspLEI	GCGC	3 cut(s)	468, 767, 913
AspS9I	GGNCC	7 cut(s)	206, 602, 986, 1457, 1519, 1600, 2192
AsuHPI	GGTGA	2 cut(s)	592, 2984
AsuII	TTCGAA	1 cut(s)	45
AvaI	CYCGRG	2 cut(s)	384, 2187
AvaII	GGWCC	5 cut(s)	206, 1457, 1519, 1600, 2192
AxyI	CCTNAGG	1 cut(s)	1881
BanII	GRGCYC	3 cut(s)	1322, 2188, 3225
BarI	GAAGNNNNNNTAC	2 cut(s)	402, 434
BauI	CACGAG	1 cut(s)	513
BbsI	GAAGAC	2 cut(s)	146, 1971
Bbv12I	GWGCWC	3 cut(s)	505, 2188, 3201
BbvCI	CCTCAGC	1 cut(s)	1756
BbvI	GCAGC	4 cut(s)	785, 1229, 2577, 2868
BccI	CCATC	4 cut(s)	1223, 1556, 2171, 2963
BceAI	ACGGC	2 cut(s)	589, 1773
BcgI	CGANNNNNNTGC	2 cut(s)	1098, 1132
BciT130I	CCWGG	6 cut(s)	175, 752, 984, 1007, 1281, 2649
BciVI	GTATCC	3 cut(s)	965, 1024, 2100
BclI	TGATCA	2 cut(s)	679, 1822
BcoDI	GTCTC	1 cut(s)	387
BfaI	CTAG	6 cut(s)	1251, 1382, 1695, 1811, 3002, 3226
BfmI	CTRYAG	3 cut(s)	701, 1839, 2304
BfoI	RGCGCY	1 cut(s)	914
BfrI	CTTAAG	1 cut(s)	3068
BfuI	GTATCC	3 cut(s)	965, 1024, 2100
BglI	GCCNNNNNGGC	2 cut(s)	170, 796
BglII	AGATCT	1 cut(s)	277
BisI	GCNGC	5 cut(s)	774, 1218, 1221, 2591, 2882
BlpI	GCTNAGC	1 cut(s)	1740
BlsI	GCNGC	5 cut(s)	775, 1219, 1222, 2592, 2883
BmcAI	AGTACT	1 cut(s)	2256
Bme1390I	CCNGG	6 cut(s)	175, 752, 984, 1007, 1281, 2649
Bme18I	GGWCC	5 cut(s)	206, 1457, 1519, 1600, 2192
BmeT110I	CYCGRG	2 cut(s)	384, 2187
BmgBI	CACGTC	1 cut(s)	2015
BmgT120I	GGNCC	7 cut(s)	206, 602, 986, 1457, 1519, 1600, 2192
BmiI	GGNNCC	2 cut(s)	1520, 2193
BmrFI	CCNGG	6 cut(s)	175, 752, 984, 1007, 1281, 2649
BmrI	ACTGGG	1 cut(s)	3167
BmsI	GCATC	7 cut(s)	33, 308, 760, 1054, 1256, 2221, 2905
BmuI	ACTGGG	1 cut(s)	3167
BpiI	GAAGAC	2 cut(s)	146, 1971
BplI	GAGNNNNNCTC	6 cut(s)	2596, 2628, 2711, 2743, 3127, 3159
BpmI	CTGGAG	6 cut(s)	140, 196, 1461, 1526, 1980, 2355
Bpu10I	CCTNAGC	2 cut(s)	1041, 1756
Bpu1102I	GCTNAGC	1 cut(s)	1740
Bpu14I	TTCGAA	1 cut(s)	45
BpuEI	CTTGAG	2 cut(s)	947, 1079
Bsa29I	ATCGAT	1 cut(s)	27
BsaI	GGTCTC	1 cut(s)	387
BsaJI	CCNNGG	5 cut(s)	960, 983, 1353, 1522, 1789
BsaWI	WCCGGW	1 cut(s)	3125
BsaXI	ACNNNNNCTCC	4 cut(s)	169, 199, 1333, 1363
Bsc4I	CCNNNNNNNGG	4 cut(s)	548, 1795, 2139, 2491
Bse118I	RCCGGY	2 cut(s)	462, 1119
Bse1I	ACTGG	8 cut(s)	136, 142, 208, 592, 1855, 1963, 1973, 3173
Bse21I	CCTNAGG	1 cut(s)	1881
Bse3DI	GCAATG	5 cut(s)	1296, 1608, 2624, 2876, 3108
BseAI	TCCGGA	1 cut(s)	3125
BseBI	CCWGG	6 cut(s)	175, 752, 984, 1007, 1281, 2649
BseCI	ATCGAT	1 cut(s)	27
BseDI	CCNNGG	5 cut(s)	960, 983, 1353, 1522, 1789
BseGI	GGATG	8 cut(s)	84, 299, 1069, 1276, 2149, 2182, 2236, 2955
BseLI	CCNNNNNNNGG	4 cut(s)	548, 1795, 2139, 2491
BseMI	GCAATG	5 cut(s)	1296, 1608, 2624, 2876, 3108
BseNI	ACTGG	8 cut(s)	136, 142, 208, 592, 1855, 1963, 1973, 3173
BseRI	GAGGAG	2 cut(s)	1471, 2196
BseXI	GCAGC	4 cut(s)	785, 1229, 2577, 2868
BsgI	GTGCAG	1 cut(s)	1788
Bsh1236I	CGCG	2 cut(s)	269, 426
BshFI	GGCC	4 cut(s)	173, 361, 604, 988
BshVI	ATCGAT	1 cut(s)	27
BsiHKAI	GWGCWC	3 cut(s)	505, 2188, 3201
BsiHKCI	CYCGRG	2 cut(s)	384, 2187
BsiSI	CCGG	4 cut(s)	322, 463, 1120, 3126
BslFI	GGGAC	4 cut(s)	111, 1022, 1532, 2483
BslI	CCNNNNNNNGG	4 cut(s)	548, 1795, 2139, 2491
BsmAI	GTCTC	1 cut(s)	387
BsmFI	GGGAC	4 cut(s)	111, 1022, 1532, 2483
BsmI	GAATGC	1 cut(s)	2758
BsnI	GGCC	4 cut(s)	173, 361, 604, 988
Bso31I	GGTCTC	1 cut(s)	387
BsoBI	CYCGRG	2 cut(s)	384, 2187
Bsp119I	TTCGAA	1 cut(s)	45
Bsp1286I	GDGCHC	5 cut(s)	505, 1322, 2188, 3201, 3225
Bsp13I	TCCGGA	1 cut(s)	3125
Bsp1407I	TGTACA	1 cut(s)	1201
Bsp1720I	GCTNAGC	1 cut(s)	1740
BspACI	CCGC	5 cut(s)	267, 304, 426, 1221, 1396
BspANI	GGCC	4 cut(s)	173, 361, 604, 988
BspDI	ATCGAT	1 cut(s)	27
BspEI	TCCGGA	1 cut(s)	3125
BspFNI	CGCG	2 cut(s)	269, 426
BspHI	TCATGA	1 cut(s)	2032
BspLI	GGNNCC	2 cut(s)	1520, 2193
BspPI	GGATC	6 cut(s)	313, 1871, 1917, 2544, 2906, 2998
BspT104I	TTCGAA	1 cut(s)	45
BspTI	CTTAAG	1 cut(s)	3068
BspTNI	GGTCTC	1 cut(s)	387
BsrDI	GCAATG	5 cut(s)	1296, 1608, 2624, 2876, 3108
BsrFI	RCCGGY	2 cut(s)	462, 1119
BsrGI	TGTACA	1 cut(s)	1201
BsrI	ACTGG	8 cut(s)	136, 142, 208, 592, 1855, 1963, 1973, 3173
BssAI	RCCGGY	2 cut(s)	462, 1119
BssECI	CCNNGG	5 cut(s)	960, 983, 1353, 1522, 1789
BssSI	CACGAG	1 cut(s)	513
BssT1I	CCWWGG	3 cut(s)	960, 1353, 1522
Bst2BI	CACGAG	1 cut(s)	513
Bst2UI	CCWGG	6 cut(s)	175, 752, 984, 1007, 1281, 2649
Bst4CI	ACNGT	6 cut(s)	264, 722, 1036, 1072, 1860, 2843
Bst6I	CTCTTC	2 cut(s)	176, 3150
BstAFI	CTTAAG	1 cut(s)	3068
BstAPI	GCANNNNNTGC	1 cut(s)	1614
BstAUI	TGTACA	1 cut(s)	1201
BstBI	TTCGAA	1 cut(s)	45
BstC8I	GCNNGC	9 cut(s)	62, 448, 464, 811, 1121, 1615, 1917, 2464, 3115
BstDSI	CCRYGG	1 cut(s)	1789
BstF5I	GGATG	8 cut(s)	84, 299, 1069, 1276, 2149, 2182, 2236, 2955
BstFNI	CGCG	2 cut(s)	269, 426
BstH2I	RGCGCY	1 cut(s)	914
BstHHI	GCGC	3 cut(s)	468, 767, 913
BstMAI	GTCTC	1 cut(s)	387
BstNI	CCWGG	6 cut(s)	175, 752, 984, 1007, 1281, 2649
BstNSI	RCATGY	1 cut(s)	1144
BstSCI	CCNGG	6 cut(s)	173, 750, 982, 1005, 1279, 2647
BstSFI	CTRYAG	3 cut(s)	701, 1839, 2304
BstUI	CGCG	2 cut(s)	269, 426
BstV1I	GCAGC	4 cut(s)	785, 1229, 2577, 2868
BstV2I	GAAGAC	2 cut(s)	146, 1971
BstX2I	RGATCY	3 cut(s)	277, 318, 2990
BstXI	CCANNNNNNTGG	1 cut(s)	967
BstYI	RGATCY	3 cut(s)	277, 318, 2990
Bsu15I	ATCGAT	1 cut(s)	27
Bsu36I	CCTNAGG	1 cut(s)	1881
BsuI	GTATCC	3 cut(s)	965, 1024, 2100
BsuRI	GGCC	4 cut(s)	173, 361, 604, 988
BsuTUI	ATCGAT	1 cut(s)	27
BtgI	CCRYGG	1 cut(s)	1789
BtrI	CACGTC	1 cut(s)	2015
BtsCI	GGATG	8 cut(s)	84, 299, 1069, 1276, 2149, 2182, 2236, 2955
BtsI	GCAGTG	1 cut(s)	113
BtsIMutI	CAGTG	2 cut(s)	113, 129
Cac8I	GCNNGC	9 cut(s)	62, 448, 464, 811, 1121, 1615, 1917, 2464, 3115
CaiI	CAGNNNCTG	2 cut(s)	1375, 1763
CciI	TCATGA	1 cut(s)	2032
CfoI	GCGC	3 cut(s)	468, 767, 913
Cfr10I	RCCGGY	2 cut(s)	462, 1119
Cfr13I	GGNCC	7 cut(s)	206, 602, 986, 1457, 1519, 1600, 2192
ClaI	ATCGAT	1 cut(s)	27
CseI	GACGC	1 cut(s)	482
Csp6I	GTAC	8 cut(s)	10, 1073, 1202, 1448, 1510, 1972, 2255, 2732
CviQI	GTAC	8 cut(s)	10, 1073, 1202, 1448, 1510, 1972, 2255, 2732
DraI	TTTAAA	1 cut(s)	1236
Eam1104I	CTCTTC	2 cut(s)	176, 3150
EarI	CTCTTC	2 cut(s)	176, 3150
Ecl136II	GAGCTC	1 cut(s)	2186
Eco130I	CCWWGG	3 cut(s)	960, 1353, 1522
Eco24I	GRGCYC	3 cut(s)	1322, 2188, 3225
Eco31I	GGTCTC	1 cut(s)	387
Eco32I	GATATC	1 cut(s)	568
Eco47I	GGWCC	5 cut(s)	206, 1457, 1519, 1600, 2192
Eco47III	AGCGCT	1 cut(s)	912
Eco53kI	GAGCTC	1 cut(s)	2186
Eco57I	CTGAAG	4 cut(s)	840, 963, 1766, 2225
Eco81I	CCTNAGG	1 cut(s)	1881
Eco88I	CYCGRG	2 cut(s)	384, 2187
EcoICRI	GAGCTC	1 cut(s)	2186
EcoO109I	RGGNCCY	2 cut(s)	1519, 2192
EcoRI	GAATTC	1 cut(s)	1298
EcoRII	CCWGG	6 cut(s)	173, 750, 982, 1005, 1279, 2647
EcoRV	GATATC	1 cut(s)	568
EcoT14I	CCWWGG	3 cut(s)	960, 1353, 1522
EcoT22I	ATGCAT	3 cut(s)	301, 401, 1610
EcoT38I	GRGCYC	3 cut(s)	1322, 2188, 3225
ErhI	CCWWGG	3 cut(s)	960, 1353, 1522
FalI	AAGNNNNNCTT	6 cut(s)	337, 369, 2415, 2447, 3006, 3038
FaqI	GGGAC	4 cut(s)	111, 1022, 1532, 2483
FauI	CCCGC	1 cut(s)	311
FauNDI	CATATG	2 cut(s)	761, 2788
FbaI	TGATCA	2 cut(s)	679, 1822
FblI	GTMKAC	1 cut(s)	1855
Fnu4HI	GCNGC	5 cut(s)	774, 1218, 1221, 2591, 2882
FokI	GGATG	8 cut(s)	71, 286, 1076, 1263, 2156, 2189, 2243, 2942
FriOI	GRGCYC	3 cut(s)	1322, 2188, 3225
Fsp4HI	GCNGC	5 cut(s)	774, 1218, 1221, 2591, 2882
FspBI	CTAG	6 cut(s)	1251, 1382, 1695, 1811, 3002, 3226
FspI	TGCGCA	1 cut(s)	766
GlaI	GCGC	3 cut(s)	467, 766, 912
GluI	GCNGC	5 cut(s)	774, 1218, 1221, 2591, 2882
GsuI	CTGGAG	6 cut(s)	140, 196, 1461, 1526, 1980, 2355
HaeII	RGCGCY	1 cut(s)	914
HaeIII	GGCC	4 cut(s)	173, 361, 604, 988
HapII	CCGG	4 cut(s)	322, 463, 1120, 3126
HgaI	GACGC	1 cut(s)	482
HhaI	GCGC	3 cut(s)	468, 767, 913
Hin6I	GCGC	3 cut(s)	466, 765, 911
HinP1I	GCGC	3 cut(s)	466, 765, 911
HincII	GTYRAC	1 cut(s)	2160
HindII	GTYRAC	1 cut(s)	2160
HindIII	AAGCTT	1 cut(s)	923
HpaII	CCGG	4 cut(s)	322, 463, 1120, 3126
HphI	GGTGA	2 cut(s)	592, 2984
Hpy166II	GTNNAC	6 cut(s)	70, 419, 1856, 2160, 2828, 2852
Hpy8I	GTNNAC	6 cut(s)	70, 419, 1856, 2160, 2828, 2852
Hpy99I	CGWCG	2 cut(s)	10, 740
HpyAV	CCTTC	7 cut(s)	801, 849, 1470, 1741, 1799, 1827, 3055
HpyCH4III	ACNGT	6 cut(s)	264, 722, 1036, 1072, 1860, 2843
HpyCH4IV	ACGT	3 cut(s)	8, 1897, 2014
HpySE526I	ACGT	3 cut(s)	8, 1897, 2014
HspAI	GCGC	3 cut(s)	466, 765, 911
Kpn2I	TCCGGA	1 cut(s)	3125
KroI	GCCGGC	2 cut(s)	462, 1119
KroNI	GCCGGC	2 cut(s)	464, 1121
Ksp22I	TGATCA	2 cut(s)	679, 1822
LmnI	GCTCC	2 cut(s)	2042, 2183
Lsp1109I	GCAGC	4 cut(s)	785, 1229, 2577, 2868
LweI	GCATC	7 cut(s)	33, 308, 760, 1054, 1256, 2221, 2905
MaeI	CTAG	6 cut(s)	1251, 1382, 1695, 1811, 3002, 3226
MaeII	ACGT	3 cut(s)	8, 1897, 2014
MaeIII	GTNAC	6 cut(s)	258, 524, 1136, 2126, 2211, 2930
MfeI	CAATTG	2 cut(s)	1224, 1722
MflI	RGATCY	3 cut(s)	277, 318, 2990
MhlI	GDGCHC	5 cut(s)	505, 1322, 2188, 3201, 3225
MlyI	GAGTC	3 cut(s)	133, 232, 2720
MmeI	TCCRAC	4 cut(s)	1380, 1926, 1990, 2429
Mph1103I	ATGCAT	3 cut(s)	301, 401, 1610
MroI	TCCGGA	1 cut(s)	3125
MroNI	GCCGGC	2 cut(s)	462, 1119
MroXI	GAANNNNTTC	1 cut(s)	2499
MslI	CAYNNNNRTG	5 cut(s)	29, 2031, 2037, 2554, 2960
MspA1I	CMGCKG	2 cut(s)	1263, 1454
MspCI	CTTAAG	1 cut(s)	3068
MspI	CCGG	4 cut(s)	322, 463, 1120, 3126
MspR9I	CCNGG	6 cut(s)	175, 752, 984, 1007, 1281, 2649
MunI	CAATTG	2 cut(s)	1224, 1722
Mva1269I	GAATGC	1 cut(s)	2758
MvaI	CCWGG	6 cut(s)	175, 752, 984, 1007, 1281, 2649
MvnI	CGCG	2 cut(s)	269, 426
NaeI	GCCGGC	2 cut(s)	464, 1121
NdeI	CATATG	2 cut(s)	761, 2788
NgoMIV	GCCGGC	2 cut(s)	462, 1119
NlaIV	GGNNCC	2 cut(s)	1520, 2193
NmuCI	GTSAC	2 cut(s)	258, 1136
NsbI	TGCGCA	1 cut(s)	766
NsiI	ATGCAT	3 cut(s)	301, 401, 1610
NspI	RCATGY	1 cut(s)	1144
NspV	TTCGAA	1 cut(s)	45
PaeR7I	CTCGAG	1 cut(s)	384
PagI	TCATGA	1 cut(s)	2032
PciI	ACATGT	1 cut(s)	1140
PcsI	WCGNNNNNNNCGW	3 cut(s)	51, 1894, 2020
PctI	GAATGC	1 cut(s)	2758
PdiI	GCCGGC	2 cut(s)	464, 1121
PdmI	GAANNNNTTC	1 cut(s)	2499
PfoI	TCCNGGA	1 cut(s)	1279
PkrI	GCNGC	5 cut(s)	775, 1219, 1222, 2592, 2883
PleI	GAGTC	3 cut(s)	132, 231, 2720
PpsI	GAGTC	3 cut(s)	132, 231, 2720
PpuMI	RGGWCCY	2 cut(s)	1519, 2192
PscI	ACATGT	1 cut(s)	1140
PshBI	ATTAAT	2 cut(s)	402, 2808
PsiI	TTATAA	1 cut(s)	666
Psp124BI	GAGCTC	1 cut(s)	2188
Psp5II	RGGWCCY	2 cut(s)	1519, 2192
Psp6I	CCWGG	6 cut(s)	173, 750, 982, 1005, 1279, 2647
PspGI	CCWGG	6 cut(s)	173, 750, 982, 1005, 1279, 2647
PspN4I	GGNNCC	2 cut(s)	1520, 2193
PspPI	GGNCC	7 cut(s)	206, 602, 986, 1457, 1519, 1600, 2192
PspPPI	RGGWCCY	2 cut(s)	1519, 2192
PstNI	CAGNNNCTG	2 cut(s)	1375, 1763
PsuI	RGATCY	3 cut(s)	277, 318, 2990
PvuII	CAGCTG	2 cut(s)	1263, 1454
RsaI	GTAC	8 cut(s)	11, 1074, 1203, 1449, 1511, 1973, 2256, 2733
RsaNI	GTAC	8 cut(s)	10, 1073, 1202, 1448, 1510, 1972, 2255, 2732
RseI	CAYNNNNRTG	5 cut(s)	29, 2031, 2037, 2554, 2960
SacI	GAGCTC	1 cut(s)	2188
SatI	GCNGC	5 cut(s)	774, 1218, 1221, 2591, 2882
Sau96I	GGNCC	7 cut(s)	206, 602, 986, 1457, 1519, 1600, 2192
ScaI	AGTACT	1 cut(s)	2256
SchI	GAGTC	3 cut(s)	133, 232, 2720
ScrFI	CCNGG	6 cut(s)	175, 752, 984, 1007, 1281, 2649
SduI	GDGCHC	5 cut(s)	505, 1322, 2188, 3201, 3225
SfaNI	GCATC	7 cut(s)	33, 308, 760, 1054, 1256, 2221, 2905
SfcI	CTRYAG	3 cut(s)	701, 1839, 2304
Sfr274I	CTCGAG	1 cut(s)	384
SfuI	TTCGAA	1 cut(s)	45
SinI	GGWCC	5 cut(s)	206, 1457, 1519, 1600, 2192
SlaI	CTCGAG	1 cut(s)	384
SmiMI	CAYNNNNRTG	5 cut(s)	29, 2031, 2037, 2554, 2960
SmlI	CTYRAG	4 cut(s)	384, 926, 1058, 3068
SmoI	CTYRAG	4 cut(s)	384, 926, 1058, 3068
SsiI	CCGC	5 cut(s)	267, 304, 426, 1221, 1396
SspI	AATATT	1 cut(s)	2806
SspMI	CTAG	6 cut(s)	1251, 1382, 1695, 1811, 3002, 3226
SstI	GAGCTC	1 cut(s)	2188
StyD4I	CCNGG	6 cut(s)	173, 750, 982, 1005, 1279, 2647
StyI	CCWWGG	3 cut(s)	960, 1353, 1522
TaaI	ACNGT	6 cut(s)	264, 722, 1036, 1072, 1860, 2843
TaiI	ACGT	3 cut(s)	11, 1900, 2017
TaqI	TCGA	9 cut(s)	27, 45, 385, 570, 735, 954, 1108, 1549, 2286
TatI	WGTACW	5 cut(s)	1072, 1201, 1509, 2254, 2731
TauI	GCSGC	1 cut(s)	1223
TscAI	CASTG	2 cut(s)	120, 136
TseFI	GTSAC	2 cut(s)	258, 1136
TseI	GCWGC	4 cut(s)	773, 1217, 2590, 2881
Tsp45I	GTSAC	2 cut(s)	258, 1136
TspGWI	ACGGA	3 cut(s)	243, 1572, 2012
TspRI	CASTG	2 cut(s)	120, 136
Vha464I	CTTAAG	1 cut(s)	3068
VpaK11BI	GGWCC	5 cut(s)	206, 1457, 1519, 1600, 2192
VspI	ATTAAT	2 cut(s)	402, 2808
XapI	RAATTY	6 cut(s)	1298, 2135, 2248, 2393, 3044, 3052
XceI	RCATGY	1 cut(s)	1144
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1312
XhoI	CTCGAG	1 cut(s)	384
XmiI	GTMKAC	1 cut(s)	1855
XmnI	GAANNNNTTC	1 cut(s)	2499
XspI	CTAG	6 cut(s)	1251, 1382, 1695, 1811, 3002, 3226
ZrmI	AGTACT	1 cut(s)	2256
Zsp2I	ATGCAT	3 cut(s)	301, 401, 1610

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.