RLG00000019686

Regulator of telomere elongation helicase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
55403546 .. 55419390
15845 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019686

Sequence Viewer

Length: 3405 bp
ATGAATCCAGCCGTCAAGTACTCGCAGCACCGGAACCACACCAAGCTCGTCTCTAATTCCGAAGCTGAGGCGGTGCGGCCCAAGATTGTACTGATTTCCGTCACTGATAGCGACGCCACCGATTCCTCCAGCGACGACGAGCTTGAGCCGTTCTTTGGCCGCCAGAGAGTGAAGAAGTATGTGAATGAGATTTCAATTGAGTCGTGTTCGAGGGAGGCCGAGGAGGCGGCGGCGGTCTGGAAGAGCAGGACGTCGAGAACGGATCAAGTCCTCTCCTTTTTCTACCAACAGATGCCGACTTATAATATCAGAGGCATCGATGTCGATTTCCCATTCGAGGCCTACGATTGCCAGCTCGTTTACATGGAGAAAGTTATTCAATCTCTCCAGCAAAGATCTAACGCACTGTTGGAGAGTCCGACTGGAACTGGGAAAACCCTTTGTCTTCTCTGCGCCACATTGGCCTGGAGAAAGAGCTTGGGGGTTTTCTCAACTGGTCCGAATGTGAAGATGAGTCAGATCAATGGAGATAAATCAGGTGCTTCATTGTCCCAGTCCCAGTCCCAGACCAAAGATCATCCTACCATAATATATGCGTCCCGCACTCACAGCCAGATCCGGCAAGTAATTCAAGAGTTGAAAAGAAGCTCTTACAGGCCGAAAATGGTAGTATTGGGTTCTCGAGAGCAGCTATGCATTCATGATGAAGTGAGTTCACTTCATGGAAAAGCACAGACGAATGCCTGTCACTTCCTCTGTAGAAAGCGTACAAAGCGTTATTGCAAACATTATTCTCGTACTGCCGATTACTTGAAGAATAATTCCCACCTTGGAGATGAACCTATTGACATTGAGGATTTGGTCAATACTGGAAGAAAGTCTGGGCCGTGCCCTTATTACTTATCCCGGGATCTTCATAAGGTTGTTGATATATTATTTGTACCTTACAACTATCTTATTGATCGTGGGTTTAGAAAATCACTACAAATTAATTGGAAAAACAGTATTCTCATATTTGATGAAGCTCACAACCTGGAAAGCATATGTGCAGATGCGGCTTCTTTTGACTTGCCATCTTGGCTTCTTACAGCATGCATTTCTGAAGCGAAAAATTGTATTGACCTTTCTGTACAAAGAAGGGATGAATCAACCGATAAATCAAAAAATCCAGATAACTTTGCGATTCTTAGAGCGCTTCTTTTGAAGCTTGAGAAGCGAATTTCTGAAGTGCCTATTCAATCCAAGGAATTGGGATACACTAAGCCTGGAGCGTATATCTATGAACTCCTTGCTGATCTAAACATCACACATGATACTGTTCCTATGATCATTAATATAATTGAGGAAGCTACTCTACTTATTGAGGAAGATAACCAGCAGAATGCTAAACGCAATGTCTGCCGGCTGGAAAGCATTAGTGACATCCTGAATACAATTTTCAGAGATATAAGCAATGCAAAATCCTATCGTGTTCATGTACAGGAAGTTCAGGGAAGTGCAGCAGATGGTTTAAAGGGTAAGTCATCTAGGACACTCAGCTGGTGGTGCTTTCATCCTGGAATTGCAATGGAGGAATTCTCCAAGTTGGATGTAGGCTCTATTATATTGACATCTGGCACACTATCTCCCTTAGAATCATTTGCACAGGAGCTGAAAATAGAGTTTCCTGTGCGGTTGGAAAATCCTCATGTTATTACCCCTAATCAGATATGGGCTGGAGTTGTTCCAGCTGGCCCTTCGGGTTGCTCTTTCAACTCCTCTTATAGAACTCGTGACTCGATTGAGTATAAGCAGGAACTTGGAAATGCTATTGTCAATTTTGCTCGAATTGTACCTGATGGATTGCTTGTATTCTTTCCTTCTTACTATCTTTTGGATCAATGCATTGGGTGCTGGAAGAATATGAGCCATGCCAATTCAACTACAATATGGGAAAGAATTTCCAAACACAAGAAACCTGTTGTAGAACCTAGACAATCTTCATTATTTCTTTCATCAATTGAGGACTATATGGCTAAGCTGAAGGACACTTCAGCTTCTGGTGCAATATTTTTTGCCGTTTGCCGTGGTAAGGTAAGTGAAGGATTAGATTTTGCCGATCACGCTGGAAGAGCTGTAATTGTTACTGGTATGCCATTTGCCACGTGGACTGATCCTAAGGTTCGTCTGAAACGTGAGTACTTAGATGAACAGGCACATTCTCAACGGCAAGTATGTAAGGTGCAGGTTCTGACTGGCGAAGACTGGTACAATCAACAAGCATCACGCGCGGTGAATCAGGCTGTTGGACGTGTAATCCGTCATCGTCATGATTATGGAGCAATTATTTTTCTTGATGAAAGGTTTGCACAGCCAAATCGTCAATCTCAAATATCTCTCTGGATACGACCTCATATCAAGTGTTACTCCAAATTTGGGGATGTGGTTTTTACATTAACCCGTTTCTTCCGGGATGGAGAAGCTCGGGGTCCTACAAAGCTGAATTTATTAACAACTGAAAAACAGGGAAAGATATGTGAGTCGGAAATTCAGCAACCTTCAGACAAATTTTATTTTGATAAATTTCTCCCCGGGAATACACAAGTGGGTCAAGGCTGTCCTGTAAAGTTGTCATCTTCCATTACTGAGGCTAGAAGGGAAAAAGTGTTCAGCCTGTTGGGTGAAATCGTCCCTGCTAATCGCTCTTCTGTTACTTGCTGCAAGGATCAGTCTGTGTCATGGAAGTGCTCAAATGACCTTTTAGGAAATGAGAAAAAGCTTCTTTCCCTTAAGAGGGAGAGTATGCAGTGTCAAGATAGAAAAGTAATTAATTTTACTGATGAATCAATATTAAATGAAAAGCGGAGTGAAGAACTGATAACACCTTGTTCTGCGAAGAAGAGTAAAGTAAGCACAGAACACAATGCAGCACAACATATTAAAAATTCTATTGAGCATTCATCTCTTACAAAAGATTTTGAATTGCATGGCCTTCTTTCCACTATAAGTTCAATGAGAAGCGAATGCTCACATAGATCTAAGTCATCTGATAGAGAAACTACTCAAAATGCTCAAGCTGGTTCAAAGCTGCTGCATAAAGACAACAGTGTTACATCGAGTCCTGTGCCTTCTGGTGATGAGGAAATGAGAGGTTCTCAATTTCTTGTTCAGGTTAAAGAGAAACTTAATGCTTTGGAGTATAAAGAATTTGTAAATTTGATGAAGGCACTGAAGTCCAAAGCAATGAACATAAGTGAAGTTTTGCAATCAATTGCGAGATTGTTTTCTGGACCAGAGAGGCTTCCCCTTCTTAAAAGATTTAAGTATTTTATCCCAGCAAAGTATCATTCCATGTATGAGCACTATTTTCAAACCAATGGATCTCCTCAGAGTGAGATGCACAACAAGAAGGCCGGGTTTTCCTGA

Protein Analysis

1135

Amino Acids

128.3

Weight (kDa)

8.74

Isoelectric Point (pI)

49.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DEAD_2 PF06733 198 - 358 5e-54 DEAD_2
ARCH_RTEL1 PF23109 364 - 519 5.8e-41 RTEL1 helicase, ARCH domain
Helicase_C_2 PF13307 604 - 797 4.3e-49 Helicase C-terminal domain
HHD_RTEL1 PF23116 999 - 1116 1.3e-11 RTEL1, HHD domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 303
AatII GACGTC 1 cut(s) 254
Acc36I ACCTGC 1 cut(s) 2215
AccII CGCG 2 cut(s) 2268, 2270
AclWI GGATC 7 cut(s) 270, 610, 918, 1884, 2147, 2712, 3367
AcoI YGGCCR 1 cut(s) 157
AcuI CTGAAG 6 cut(s) 1122, 1245, 2016, 2042, 2523, 3230
AcvI CACGTG 1 cut(s) 2145
AcyI GRCGYC 2 cut(s) 114, 251
AfeI AGCGCT 1 cut(s) 1194
AfiI CCNNNNNNNGG 6 cut(s) 155, 337, 2071, 2415, 2772, 2773
AflII CTTAAG 1 cut(s) 2768
AflIII ACRYGT 1 cut(s) 2290
AjiI CACGTC 1 cut(s) 2291
AjnI CCWGG 4 cut(s) 464, 1032, 1264, 1555
AloI GAACNNNNNNTCC 2 cut(s) 2630, 2662
Alw21I GWGCWC 2 cut(s) 2729, 3342
Alw26I GTCTC 1 cut(s) 55
AlwI GGATC 7 cut(s) 270, 610, 918, 1884, 2147, 2712, 3367
AlwNI CAGNNNCTG 3 cut(s) 1651, 2039, 2230
Ama87I CYCGRG 4 cut(s) 681, 906, 2463, 2570
Aor51HI AGCGCT 1 cut(s) 1194
ApeKI GCWGC 7 cut(s) 25, 688, 1499, 2697, 2906, 3067, 3070
AseI ATTAAT 3 cut(s) 990, 1332, 2808
AspLEI GCGC 3 cut(s) 455, 1195, 2270
AspS9I GGNCC 6 cut(s) 78, 497, 884, 1733, 2468, 3269
AsuC2I CCSGG 6 cut(s) 907, 908, 2450, 2571, 2572, 3394
AsuHPI GGTGA 3 cut(s) 2284, 2672, 3125
AvaI CYCGRG 4 cut(s) 681, 906, 2463, 2570
AvaII GGWCC 3 cut(s) 497, 2468, 3269
AxyI CCTNAGG 1 cut(s) 2157
BaeGI GKGCMC 1 cut(s) 893
BarI GAAGNNNNNNTAC 2 cut(s) 1338, 1370
BauI CACGAG 1 cut(s) 1770
BbrPI CACGTG 1 cut(s) 2145
BbsI GAAGAC 2 cut(s) 437, 2247
Bbv12I GWGCWC 2 cut(s) 2729, 3342
BbvCI CCTCAGC 1 cut(s) 66
BbvI GCAGC 7 cut(s) 37, 700, 1511, 2684, 2918, 3054, 3057
BccI CCATC 4 cut(s) 1081, 1499, 1832, 2447
BceAI ACGGC 5 cut(s) 133, 871, 2042, 2049, 2222
BcgI CGANNNNNNTGC 4 cut(s) 304, 338, 3085, 3119
BciT130I CCWGG 4 cut(s) 466, 1034, 1266, 1557
BciVI GTATCC 2 cut(s) 1247, 2376
BclI TGATCA 1 cut(s) 1326
BcnI CCSGG 6 cut(s) 907, 908, 2450, 2571, 2572, 3394
BcoDI GTCTC 1 cut(s) 55
BfaI CTAG 3 cut(s) 1527, 1971, 2631
BfmI CTRYAG 1 cut(s) 757
BfoI RGCGCY 1 cut(s) 1196
BfrI CTTAAG 1 cut(s) 2768
BfuAI ACCTGC 1 cut(s) 2215
BfuI GTATCC 2 cut(s) 1247, 2376
BglI GCCNNNNNGGC 3 cut(s) 224, 461, 1078
BglII AGATCT 2 cut(s) 395, 3014
BlpI GCTNAGC 1 cut(s) 2016
BmcAI AGTACT 2 cut(s) 20, 2180
Bme18I GGWCC 3 cut(s) 497, 2468, 3269
BmeT110I CYCGRG 4 cut(s) 681, 906, 2463, 2570
BmgBI CACGTC 1 cut(s) 2291
BmgT120I GGNCC 6 cut(s) 78, 497, 884, 1733, 2468, 3269
BmiI GGNNCC 2 cut(s) 35, 2469
BmrI ACTGGG 3 cut(s) 438, 547, 553
BmsI GCATC 5 cut(s) 282, 324, 1042, 2270, 3366
BmuI ACTGGG 3 cut(s) 438, 547, 553
BpiI GAAGAC 2 cut(s) 437, 2247
BplI GAGNNNNNCTC 4 cut(s) 1562, 1594, 3118, 3150
BpmI CTGGAG 5 cut(s) 112, 371, 487, 1287, 1737
Bpu10I CCTNAGC 1 cut(s) 66
Bpu1102I GCTNAGC 1 cut(s) 2016
BpuEI CTTGAG 3 cut(s) 164, 1229, 3036
BpuMI CCSGG 6 cut(s) 907, 908, 2450, 2571, 2572, 3394
Bsa29I ATCGAT 1 cut(s) 318
BsaAI YACGTR 1 cut(s) 2145
BsaHI GRCGYC 2 cut(s) 114, 251
BsaJI CCNNGG 7 cut(s) 219, 829, 906, 1242, 2065, 2569, 2570
BsaWI WCCGGW 1 cut(s) 30
BsaXI ACNNNNNCTCC 2 cut(s) 1609, 1639
Bsc4I CCNNNNNNNGG 6 cut(s) 155, 337, 2071, 2415, 2772, 2773
Bse118I RCCGGY 1 cut(s) 1401
Bse1I ACTGG 9 cut(s) 427, 433, 499, 553, 559, 874, 2131, 2239, 2249
Bse21I CCTNAGG 1 cut(s) 2157
Bse3DI GCAATG 4 cut(s) 1399, 1459, 1572, 3228
BseBI CCWGG 4 cut(s) 466, 1034, 1266, 1557
BseCI ATCGAT 1 cut(s) 318
BseDI CCNNGG 7 cut(s) 219, 829, 906, 1242, 2065, 2569, 2570
BseGI GGATG 7 cut(s) 577, 1147, 1422, 1552, 1594, 2425, 2458
BseLI CCNNNNNNNGG 6 cut(s) 155, 337, 2071, 2415, 2772, 2773
BseMI GCAATG 4 cut(s) 1399, 1459, 1572, 3228
BseMII CTCAG 4 cut(s) 57, 1549, 2616, 3380
BseNI ACTGG 9 cut(s) 427, 433, 499, 553, 559, 874, 2131, 2239, 2249
BseRI GAGGAG 3 cut(s) 236, 1747, 3354
BseSI GKGCMC 1 cut(s) 893
BseXI GCAGC 7 cut(s) 37, 700, 1511, 2684, 2918, 3054, 3057
BseYI CCCAGC 1 cut(s) 3313
BsgI GTGCAG 3 cut(s) 1068, 1518, 2243
Bsh1236I CGCG 2 cut(s) 2268, 2270
BshVI ATCGAT 1 cut(s) 318
BsiHKAI GWGCWC 2 cut(s) 2729, 3342
BsiHKCI CYCGRG 4 cut(s) 681, 906, 2463, 2570
BsiSI CCGG 7 cut(s) 31, 619, 907, 1402, 2449, 2571, 3393
BslFI GGGAC 5 cut(s) 535, 541, 547, 583, 2654
BslI CCNNNNNNNGG 6 cut(s) 155, 337, 2071, 2415, 2772, 2773
BsmAI GTCTC 1 cut(s) 55
BsmBI CGTCTC 1 cut(s) 55
BsmFI GGGAC 5 cut(s) 535, 541, 547, 583, 2654
BsmI GAATGC 5 cut(s) 696, 745, 1387, 2935, 3008
BsoBI CYCGRG 4 cut(s) 681, 906, 2463, 2570
Bsp1286I GDGCHC 3 cut(s) 893, 2729, 3342
Bsp1407I TGTACA 2 cut(s) 1129, 1477
Bsp1720I GCTNAGC 1 cut(s) 2016
BspCNI CTCAG 4 cut(s) 58, 1548, 2617, 3379
BspDI ATCGAT 1 cut(s) 318
BspFNI CGCG 2 cut(s) 2268, 2270
BspHI TCATGA 2 cut(s) 700, 2308
BspLI GGNNCC 2 cut(s) 35, 2469
BspMI ACCTGC 1 cut(s) 2215
BspPI GGATC 7 cut(s) 270, 610, 918, 1884, 2147, 2712, 3367
BspQI GCTCTTC 3 cut(s) 236, 2104, 2689
BspTI CTTAAG 1 cut(s) 2768
BsrDI GCAATG 4 cut(s) 1399, 1459, 1572, 3228
BsrFI RCCGGY 1 cut(s) 1401
BsrGI TGTACA 2 cut(s) 1129, 1477
BsrI ACTGG 9 cut(s) 427, 433, 499, 553, 559, 874, 2131, 2239, 2249
BssAI RCCGGY 1 cut(s) 1401
BssECI CCNNGG 7 cut(s) 219, 829, 906, 1242, 2065, 2569, 2570
BssNI GRCGYC 2 cut(s) 114, 251
BssSI CACGAG 1 cut(s) 1770
BssT1I CCWWGG 2 cut(s) 829, 1242
Bst2BI CACGAG 1 cut(s) 1770
Bst2UI CCWGG 4 cut(s) 466, 1034, 1266, 1557
Bst4CI ACNGT 4 cut(s) 408, 1004, 1318, 3086
Bst6I CTCTTC 4 cut(s) 236, 2104, 2689, 2873
BstACI GRCGYC 2 cut(s) 114, 251
BstAFI CTTAAG 1 cut(s) 2768
BstAPI GCANNNNNTGC 2 cut(s) 1398, 1890
BstAUI TGTACA 2 cut(s) 1129, 1477
BstBAI YACGTR 1 cut(s) 2145
BstC8I GCNNGC 4 cut(s) 353, 1093, 1403, 1732
BstDSI CCRYGG 1 cut(s) 2065
BstF5I GGATG 7 cut(s) 577, 1147, 1422, 1552, 1594, 2425, 2458
BstFNI CGCG 2 cut(s) 2268, 2270
BstH2I RGCGCY 1 cut(s) 1196
BstHHI GCGC 3 cut(s) 455, 1195, 2270
BstMAI GTCTC 1 cut(s) 55
BstNI CCWGG 4 cut(s) 466, 1034, 1266, 1557
BstNSI RCATGY 1 cut(s) 1095
BstSFI CTRYAG 1 cut(s) 757
BstSLI GKGCMC 1 cut(s) 893
BstUI CGCG 2 cut(s) 2268, 2270
BstV1I GCAGC 7 cut(s) 37, 700, 1511, 2684, 2918, 3054, 3057
BstV2I GAAGAC 2 cut(s) 437, 2247
BstX2I RGATCY 5 cut(s) 395, 615, 910, 3014, 3359
BstXI CCANNNNNNTGG 1 cut(s) 1249
BstYI RGATCY 5 cut(s) 395, 615, 910, 3014, 3359
Bsu15I ATCGAT 1 cut(s) 318
Bsu36I CCTNAGG 1 cut(s) 2157
BsuI GTATCC 2 cut(s) 1247, 2376
BsuTUI ATCGAT 1 cut(s) 318
BtgI CCRYGG 1 cut(s) 2065
BtrI CACGTC 1 cut(s) 2291
BtsCI GGATG 7 cut(s) 577, 1147, 1422, 1552, 1594, 2425, 2458
BtsI GCAGTG 1 cut(s) 2792
BtsIMutI CAGTG 5 cut(s) 102, 404, 2792, 3091, 3206
BveI ACCTGC 1 cut(s) 2215
Cac8I GCNNGC 4 cut(s) 353, 1093, 1403, 1732
CaiI CAGNNNCTG 3 cut(s) 1651, 2039, 2230
CciI TCATGA 2 cut(s) 700, 2308
CfoI GCGC 3 cut(s) 455, 1195, 2270
Cfr10I RCCGGY 1 cut(s) 1401
Cfr13I GGNCC 6 cut(s) 78, 497, 884, 1733, 2468, 3269
Cfr9I CCCGGG 2 cut(s) 906, 2570
ClaI ATCGAT 1 cut(s) 318
CseI GACGC 2 cut(s) 122, 585
DraI TTTAAA 1 cut(s) 1512
EaeI YGGCCR 1 cut(s) 157
Eam1104I CTCTTC 4 cut(s) 236, 2104, 2689, 2873
EarI CTCTTC 4 cut(s) 236, 2104, 2689, 2873
Eco130I CCWWGG 2 cut(s) 829, 1242
Eco147I AGGCCT 1 cut(s) 341
Eco47I GGWCC 3 cut(s) 497, 2468, 3269
Eco47III AGCGCT 1 cut(s) 1194
Eco57I CTGAAG 6 cut(s) 1122, 1245, 2016, 2042, 2523, 3230
Eco72I CACGTG 1 cut(s) 2145
Eco81I CCTNAGG 1 cut(s) 2157
Eco88I CYCGRG 4 cut(s) 681, 906, 2463, 2570
EcoO109I RGGNCCY 1 cut(s) 2468
EcoRI GAATTC 1 cut(s) 1574
EcoRII CCWGG 4 cut(s) 464, 1032, 1264, 1555
EcoT14I CCWWGG 2 cut(s) 829, 1242
EcoT22I ATGCAT 3 cut(s) 698, 1097, 1886
ErhI CCWWGG 2 cut(s) 829, 1242
Esp3I CGTCTC 1 cut(s) 55
FalI AAGNNNNNCTT 4 cut(s) 634, 666, 3147, 3179
FaqI GGGAC 5 cut(s) 535, 541, 547, 583, 2654
FauI CCCGC 1 cut(s) 608
FauNDI CATATG 1 cut(s) 1043
FbaI TGATCA 1 cut(s) 1326
FokI GGATG 7 cut(s) 564, 1154, 1409, 1539, 1601, 2432, 2465
FspBI CTAG 3 cut(s) 1527, 1971, 2631
GlaI GCGC 3 cut(s) 454, 1194, 2269
GsaI CCCAGC 1 cut(s) 3317
GsuI CTGGAG 5 cut(s) 112, 371, 487, 1287, 1737
HaeII RGCGCY 1 cut(s) 1196
HapII CCGG 7 cut(s) 31, 619, 907, 1402, 2449, 2571, 3393
HgaI GACGC 2 cut(s) 122, 585
HhaI GCGC 3 cut(s) 455, 1195, 2270
Hin1I GRCGYC 2 cut(s) 114, 251
Hin6I GCGC 3 cut(s) 453, 1193, 2268
HinP1I GCGC 3 cut(s) 453, 1193, 2268
HindIII AAGCTT 2 cut(s) 1205, 2756
HpaII CCGG 7 cut(s) 31, 619, 907, 1402, 2449, 2571, 3393
HphI GGTGA 3 cut(s) 2284, 2672, 3125
Hpy166II GTNNAC 3 cut(s) 361, 716, 2148
Hpy8I GTNNAC 3 cut(s) 361, 716, 2148
Hpy99I CGWCG 4 cut(s) 116, 137, 140, 256
HpyCH4III ACNGT 4 cut(s) 408, 1004, 1318, 3086
HpyCH4IV ACGT 4 cut(s) 251, 2144, 2173, 2290
HpySE526I ACGT 4 cut(s) 251, 2144, 2173, 2290
Hsp92I GRCGYC 2 cut(s) 114, 251
HspAI GCGC 3 cut(s) 453, 1193, 2268
KroI GCCGGC 1 cut(s) 1401
KroNI GCCGGC 1 cut(s) 1403
Ksp22I TGATCA 1 cut(s) 1326
LguI GCTCTTC 3 cut(s) 236, 2104, 2689
LmnI GCTCC 3 cut(s) 1268, 1648, 2318
Lsp1109I GCAGC 7 cut(s) 37, 700, 1511, 2684, 2918, 3054, 3057
LweI GCATC 5 cut(s) 282, 324, 1042, 2270, 3366
MaeI CTAG 3 cut(s) 1527, 1971, 2631
MaeII ACGT 4 cut(s) 251, 2144, 2173, 2290
MaeIII GTNAC 8 cut(s) 100, 746, 1418, 1772, 2122, 2402, 2689, 3088
MfeI CAATTG 3 cut(s) 195, 1998, 3249
MflI RGATCY 5 cut(s) 395, 615, 910, 3014, 3359
MhlI GDGCHC 3 cut(s) 893, 2729, 3342
MlyI GAGTC 6 cut(s) 209, 424, 523, 1769, 2528, 3106
MmeI TCCRAC 6 cut(s) 390, 443, 1566, 1656, 2266, 2502
Mph1103I ATGCAT 3 cut(s) 698, 1097, 1886
MroNI GCCGGC 1 cut(s) 1401
MslI CAYNNNNRTG 3 cut(s) 2307, 2313, 2722
MspA1I CMGCKG 2 cut(s) 1539, 1730
MspCI CTTAAG 1 cut(s) 2768
MspI CCGG 7 cut(s) 31, 619, 907, 1402, 2449, 2571, 3393
MunI CAATTG 3 cut(s) 195, 1998, 3249
Mva1269I GAATGC 5 cut(s) 696, 745, 1387, 2935, 3008
MvaI CCWGG 4 cut(s) 466, 1034, 1266, 1557
MvnI CGCG 2 cut(s) 2268, 2270
NaeI GCCGGC 1 cut(s) 1403
NciI CCSGG 6 cut(s) 907, 908, 2450, 2571, 2572, 3394
NdeI CATATG 1 cut(s) 1043
NgoMIV GCCGGC 1 cut(s) 1401
NlaIV GGNNCC 2 cut(s) 35, 2469
NmeAIII GCCGAG 1 cut(s) 244
NmuCI GTSAC 4 cut(s) 100, 746, 1418, 1772
NsiI ATGCAT 3 cut(s) 698, 1097, 1886
NspI RCATGY 1 cut(s) 1095
PaeI GCATGC 1 cut(s) 1095
PaeR7I CTCGAG 1 cut(s) 681
PagI TCATGA 2 cut(s) 700, 2308
PceI AGGCCT 1 cut(s) 341
PciSI GCTCTTC 3 cut(s) 236, 2104, 2689
PcsI WCGNNNNNNNCGW 3 cut(s) 342, 2170, 2296
PctI GAATGC 5 cut(s) 696, 745, 1387, 2935, 3008
PdiI GCCGGC 1 cut(s) 1403
PfeI GAWTC 7 cut(s) 4, 122, 1145, 1183, 1634, 2275, 2822
PfoI TCCNGGA 2 cut(s) 1555, 2448
PleI GAGTC 6 cut(s) 208, 423, 522, 1769, 2527, 3105
PmaCI CACGTG 1 cut(s) 2145
PmlI CACGTG 1 cut(s) 2145
PpsI GAGTC 6 cut(s) 208, 423, 522, 1769, 2527, 3105
Ppu21I YACGTR 1 cut(s) 2145
PpuMI RGGWCCY 1 cut(s) 2468
PshBI ATTAAT 3 cut(s) 990, 1332, 2808
PsiI TTATAA 1 cut(s) 303
Psp5II RGGWCCY 1 cut(s) 2468
Psp6I CCWGG 4 cut(s) 464, 1032, 1264, 1555
PspCI CACGTG 1 cut(s) 2145
PspFI CCCAGC 1 cut(s) 3313
PspGI CCWGG 4 cut(s) 464, 1032, 1264, 1555
PspN4I GGNNCC 2 cut(s) 35, 2469
PspPI GGNCC 6 cut(s) 78, 497, 884, 1733, 2468, 3269
PspPPI RGGWCCY 1 cut(s) 2468
PsrI GAACNNNNNNTAC 2 cut(s) 1470, 1502
PstNI CAGNNNCTG 3 cut(s) 1651, 2039, 2230
PsuI RGATCY 5 cut(s) 395, 615, 910, 3014, 3359
PvuII CAGCTG 2 cut(s) 1539, 1730
RseI CAYNNNNRTG 3 cut(s) 2307, 2313, 2722
SapI GCTCTTC 3 cut(s) 236, 2104, 2689
Sau96I GGNCC 6 cut(s) 78, 497, 884, 1733, 2468, 3269
ScaI AGTACT 2 cut(s) 20, 2180
SchI GAGTC 6 cut(s) 209, 424, 523, 1769, 2528, 3106
SduI GDGCHC 3 cut(s) 893, 2729, 3342
SfaNI GCATC 5 cut(s) 282, 324, 1042, 2270, 3366
SfcI CTRYAG 1 cut(s) 757
Sfr274I CTCGAG 1 cut(s) 681
SinI GGWCC 3 cut(s) 497, 2468, 3269
SlaI CTCGAG 1 cut(s) 681
SmaI CCCGGG 2 cut(s) 908, 2572
SmiMI CAYNNNNRTG 3 cut(s) 2307, 2313, 2722
SmlI CTYRAG 5 cut(s) 143, 681, 1208, 2768, 3051
SmoI CTYRAG 5 cut(s) 143, 681, 1208, 2768, 3051
SphI GCATGC 1 cut(s) 1095
SseBI AGGCCT 1 cut(s) 341
SspI AATATT 2 cut(s) 2049, 2829
SspMI CTAG 3 cut(s) 1527, 1971, 2631
StuI AGGCCT 1 cut(s) 341
StyI CCWWGG 2 cut(s) 829, 1242
TaaI ACNGT 4 cut(s) 408, 1004, 1318, 3086
TaiI ACGT 4 cut(s) 254, 2147, 2176, 2293
TaqI TCGA 9 cut(s) 209, 254, 318, 324, 336, 682, 1778, 1825, 3095
TatI WGTACW 5 cut(s) 18, 88, 1129, 1477, 2178
TauI GCSGC 5 cut(s) 79, 162, 230, 233, 1058
TfiI GAWTC 7 cut(s) 4, 122, 1145, 1183, 1634, 2275, 2822
TscAI CASTG 5 cut(s) 109, 411, 2792, 3091, 3213
TseFI GTSAC 4 cut(s) 100, 746, 1418, 1772
TseI GCWGC 7 cut(s) 25, 688, 1499, 2697, 2906, 3067, 3070
Tsp45I GTSAC 4 cut(s) 100, 746, 1418, 1772
TspGWI ACGGA 3 cut(s) 88, 275, 2288
TspMI CCCGGG 2 cut(s) 906, 2570
TspRI CASTG 5 cut(s) 109, 411, 2792, 3091, 3213
Vha464I CTTAAG 1 cut(s) 2768
VpaK11BI GGWCC 3 cut(s) 497, 2468, 3269
VspI ATTAAT 3 cut(s) 990, 1332, 2808
XceI RCATGY 1 cut(s) 1095
XcmI CCANNNNNNNNNTGG 1 cut(s) 2142
XhoI CTCGAG 1 cut(s) 681
XmaI CCCGGG 2 cut(s) 906, 2570
XspI CTAG 3 cut(s) 1527, 1971, 2631
ZraI GACGTC 1 cut(s) 252
ZrmI AGTACT 2 cut(s) 20, 2180
Zsp2I ATGCAT 3 cut(s) 698, 1097, 1886
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.