Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004469

Physical Location & Seq

Genomic Coordinates Forward (+)

205775 .. 211963

Gene Structure 6189 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G01460.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2868 bp

ATGGACGACGAGGTTGTTCAGCGAGTTTTCCAAGAAGGAGGACGAGATTTCTTCCAGCAACAACCTTCTACTTCTTCTTCCTCTTCTTCGATTCTTCAATCTCTTCCTCTTCACGTGGCTTTCGATCATGGCTATTATCTGTTGGTGAAGTCCATTCAAGAGCTTAGAGAGAAGAAGGACGGCATTGTTACTGTTGGTATTGGTGGACCTAGCGGCTCTGGTAAATCTAGCTTGGCAGAGAAAGTTGCATCTGTAATTGGCTGTACTGTTATTGCCATGGAAGATTACCGAGATAGTTTGGACGATGGTAATGAGTTGGAAACATTAGATTTTGATGCTTTAGTCCAGAATTTGGAGGATTTGATCAATGGAAAAGATACTCTTGCTCCGGTTTTTGATTTCCAGCAAAAGAAGCGTGTTGATTCCAAGATGGTGAAGACATCCTCTGGTGTGGTTATTGTTGATGGGACGTATGCTCTCCATGCAAGATTGCGTTCCTTACTGGATATTCGGGTTGCAGTGGTTGGGGGCGTTCATTTTAGCCTTCTCTCTAAAGTCCGTTATGATATTGGAGATTCGTGTTCGCTTGATTACCTTATCGACAGCATTTTCCCTTTGTTTAGAAAGCATATTGAGCCAGATCTTCATCATGCACAGATCAGAATCAACAATAGTTTTGTTTCATCATTTCGGGAAGCCATATACAAATTGAAATGCAAAACTGAGATAGTAACTTCCTTTCCTCAAGAAAGCGACGTGCAGAAGGATAATTTTATTGAGATGTACCTCAGACCACCTTCTGCAAGCGAAGAGGCACGGATAAATGACTGGATTAAAGTTCGTCAAGCTGGTATAAGGTACTATCTGTCACTTGGAGACCAAAGGATTGTTGACAAGCATTTCATTATCCGGCCTAAAGCTGAGTTTGAGGTTGGACGGATGACACTTGGAGGGTTGCTAGCTTTAGGCTATAATGTTGTTGTGAGTTACAAGAGAGCTTCAACTGCTGTCAGTTATGGTAATTTATCCCTATCACGTGAAACGATTGATACTCTTGGAGAGACTTTCCTGGTTCTGAGAGGGACAGATAGGAAGAGTGTGGGAGCTGAAGCTCTGAGAATGGGCATCACTGGGCCCTGGATCACGAAATCATACCTCGAACTGATCCTTGAAAGCAAAGTGCAACAGAATCTTAATTTCTGTAAGCTTACCCATTTTGCAGGTGTACCACGCTTGAATACACCTCCACTTTTGCAACCGTCTCCTGTAATCACTAACCAAGAGAAGCAAATTGTTGCACCAAAACCTATCCGAACTACCCCAAACATCGTTACCCGCCTTGAGGATTTATCGCAGCCTTGGACTAGATCTCCTACGAAATCCCAAATGGAACCGATGGTTGCAACTTGGCATTTCACCTCTTATGATCCACCTCATTCAGTAAGCTCTGTAGTAGATTCCTCTTTCAGGGATAATATGCGGCTTGTTCCTATGCCTGATTCATACGACTTGGATAGAGGGTTGCTACTTTCTGTTCAAGCAATACAGGCATTGCTGGAGAATAAGGGACCCCCTGTTATTGTTGGAATAGGTGGTCCTAGTGGGTCTGGTAAGACTAGCTTGGCTCATAAAATGGCAAATATAGTTGGCTGTGAAGTGGTTTCCCTTGAAAGTTACTTCAAGTCTGAACAAGTCAAAGATTTCAAGCATGACGACTTTAGTTCCCTTGATTTGCCTTTGCTCTCAAAGAACATTTCCGACATTACAAACAGTCGAAGAACCAAACTACCTATATTTGATTTGGAGACTGGCACCAGATGTGGCTTCAAGGAACTAGAAGTTCCTGAAGAGTGTGGTGTGATCATCTTCGAGGGGGTTTATGCATTGCATCCAGAAATCAGACAATCTTTGGACCTTTGGGTTGCTGTTGTGGGAGGTGTTCATTCACATCTTATCTCTAGAGTCCAGAGGGATAAAAGCCGAATCGGGTGTTTCATGTCTCAGAACGAGATAATGATGACCGTATTTCCAATGTTCCAGCAACACATCGAGCCACATCTAGTGCATGCACATGTTAAGATTCGAAATGATTTTGATCCAGTTCTCTCTCCCGAGAGCTCTTTGTTTGTATTGAAGAGCAATAAACAAGTTCCATATCAGGATATTCTCAGCATCCTTGATTCGACAAAATTCTGCAGTTCCGTTCAGAATTTTATCGATATATATTTCAGGCTATCTGGGCTTCCTGCGAATGGTCAGTTGTCAGATAGTGACTGCATACGCGTAAGAATCTGCGAGGGCAGGTTTGCAGTGCTTATACGTGAGCCAATTAGGGAAGGGAACTTCATCATTCAGCCCAAAGTAGATTTTGACATTAGCGTAAGTACTGTGGCGGGTCTTCTTAATCTCGGGTATCAAGCAGTGGCATATATCGAAGCCTCTGCTTTCATTTACCAAGACGGAAAGGTGAATGTGCCAAGTCCATACATACAGATCAAAGGCGCTAACAAAGAAGCAGTGACGGCTGCTGGTTCAGCTCTCAAACTAGATGGTTCATACACAACAAAGAGTTACCTTCAAATAGTGTTGGAAAGACTGCCACCGGTCCAGAGAAGTTCAAGTGGAATACATACACAGCAAGCAGCGCGGTTGCAAGAGCTTGTGGAATTCATACAATCGCAGGGAAGTAGTAACAGTGTGTCGGAATCATCACCAAGAAGAGATGGTTCTTCCATAGACAACGTTTTAGAAGATATGCAATCAAGAATTAAACGACTCGAACGTTGGCACACCATCAATACGGTACTATGGACATTTTTGATGTCTGCGCTCGTTGGTTACTCTCTCTACCAAAGGAAGCGTCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004849 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006206 GO:0006213 GO:0006220 GO:0006221 GO:0006222 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008655 GO:0009058 GO:0009112 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009129 GO:0009130 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009173 GO:0009174 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0018130 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0019693 GO:0034404 GO:0034641 GO:0034654 GO:0042455 GO:0043094 GO:0043097 GO:0043174 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046049 GO:0046131 GO:0046132 GO:0046134 GO:0046390 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00240 ko00983 ko01100 map00240 map00983 map01100

Pfam Domains

Protein Families

Cytidylate_kin PRK

Protein Analysis

955

Amino Acids

106.66

Weight (kDa)

6.54

Isoelectric Point (pI)

45.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRK	PF00485	106 - 222	1.3e-07	Phosphoribulokinase / Uridine kinase family
PRK	PF00485	513 - 680	1e-15	Phosphoribulokinase / Uridine kinase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004469)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01460 AT2G01460 AT2G01460
fragaria_vesca	FvH4_4g32570 FvH4_4g32570 FvH4_4g32570 FvH4_4g32570 FvH4_4g32570 FvH4_4g32570 FvH4_4g32570 FvH4_4g32570 FvH4_4g32570 FvH4_4g32570
malus_domestica	MD13G1024500.v1.1 MD16G1027200.v1.1
prunus_persica	Prupe.1G326000_v2.0.a1 Prupe.1G326000_v2.0.a1 Prupe.1G326000_v2.0.a1 Prupe.1G326000_v2.0.a1 Prupe.1G326000_v2.0.a1 Prupe.1G326000_v2.0.a1
pyrus_communis	pycom16g02300
rosa_chinensis	RchiOBHm_Chr4g0441441
rosa_laevigata	RLG00000006092
rosa_multiflora	Rmu_sc0003360.1_g000006
rosa_roxburghii	Rroxscaffold_5G00382310
rosa_rugosa	Rorug04G0333700
rosa_samantha	Rh4AG385200 Rh4BG399400 Rh4CG414400 Rh4DG392000
rosa_wichuraiana	Rw4G033270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1211
Acc36I	ACCTGC	2 cut(s)	1211, 2292
AccB1I	GGYRCC	1 cut(s)	1811
AccB7I	CCANNNNNTGG	1 cut(s)	352
AccII	CGCG	2 cut(s)	2283, 2647
AciI	CCGC	5 cut(s)	213, 1336, 1480, 2393, 2647
AclI	AACGTT	2 cut(s)	2742, 2782
AclWI	GGATC	4 cut(s)	1148, 1159, 1421, 2090
AcsI	RAATTY	4 cut(s)	349, 2189, 2209, 2666
AcuI	CTGAAG	2 cut(s)	1128, 1866
AcvI	CACGTG	2 cut(s)	115, 1037
AfaI	GTAC	6 cut(s)	265, 785, 860, 1227, 2386, 2805
AfiI	CCNNNNNNNGG	4 cut(s)	352, 1342, 1467, 2252
AflIII	ACRYGT	2 cut(s)	2071, 2281
AgeI	ACCGGT	1 cut(s)	2602
AjiI	CACGTC	1 cut(s)	757
AjnI	CCWGG	2 cut(s)	1068, 1136
Alw21I	GWGCWC	1 cut(s)	2120
Alw26I	GTCTC	5 cut(s)	870, 1055, 1266, 1799, 2004
AlwI	GGATC	4 cut(s)	1148, 1159, 1421, 2090
Ama87I	CYCGRG	2 cut(s)	2111, 2408
AoxI	GGCC	2 cut(s)	911, 1133
ApaI	GGGCCC	1 cut(s)	1137
ApeKI	GCWGC	3 cut(s)	1354, 2525, 2642
ApoI	RAATTY	4 cut(s)	349, 2189, 2209, 2666
ArsI	GACNNNNNNTTYG	1 cut(s)	2845
AsiGI	ACCGGT	1 cut(s)	2602
AspLEI	GCGC	3 cut(s)	2504, 2647, 2830
AspS9I	GGNCC	7 cut(s)	206, 1133, 1134, 1568, 1595, 1912, 2605
AsuHPI	GGTGA	5 cut(s)	157, 445, 1408, 2479, 2703
AsuII	TTCGAA	1 cut(s)	2083
AsuNHI	GCTAGC	1 cut(s)	958
AvaI	CYCGRG	2 cut(s)	2111, 2408
AvaII	GGWCC	5 cut(s)	206, 1568, 1595, 1912, 2605
BaeGI	GKGCMC	1 cut(s)	1137
BanI	GGYRCC	1 cut(s)	1811
BanII	GRGCYC	2 cut(s)	1137, 2120
BbrPI	CACGTG	2 cut(s)	115, 1037
BbsI	GAAGAC	2 cut(s)	443, 2390
Bbv12I	GWGCWC	1 cut(s)	2120
BbvI	GCAGC	3 cut(s)	1366, 2512, 2654
BccI	CCATC	7 cut(s)	299, 424, 458, 1390, 2543, 2717, 2801
BceAI	ACGGC	2 cut(s)	196, 2538
BcgI	CGANNNNNNTGC	2 cut(s)	2423, 2457
BciT130I	CCWGG	2 cut(s)	1070, 1138
BclI	TGATCA	2 cut(s)	363, 1860
BcoDI	GTCTC	5 cut(s)	870, 1055, 1266, 1799, 2004
BfmI	CTRYAG	2 cut(s)	1449, 2194
BfoI	RGCGCY	1 cut(s)	2505
BfuAI	ACCTGC	2 cut(s)	1211, 2292
BglII	AGATCT	2 cut(s)	640, 1367
BisI	GCNGC	5 cut(s)	214, 1355, 1481, 2526, 2643
BlsI	GCNGC	5 cut(s)	215, 1356, 1482, 2527, 2644
BmcAI	AGTACT	1 cut(s)	2386
Bme1390I	CCNGG	2 cut(s)	1070, 1138
Bme18I	GGWCC	5 cut(s)	206, 1568, 1595, 1912, 2605
BmeT110I	CYCGRG	2 cut(s)	2111, 2408
BmgBI	CACGTC	1 cut(s)	757
BmgT120I	GGNCC	7 cut(s)	206, 1133, 1134, 1568, 1595, 1912, 2605
BmiI	GGNNCC	5 cut(s)	1135, 1392, 1569, 1570, 1813
BmrFI	CCNGG	2 cut(s)	1070, 1138
BmrI	ACTGGG	1 cut(s)	1140
BmsI	GCATC	5 cut(s)	257, 325, 1134, 1897, 2181
BmtI	GCTAGC	1 cut(s)	962
BmuI	ACTGGG	1 cut(s)	1140
BpiI	GAAGAC	2 cut(s)	443, 2390
BpmI	CTGGAG	1 cut(s)	1577
Bpu14I	TTCGAA	1 cut(s)	2083
BpuEI	CTTGAG	2 cut(s)	729, 1361
Bsa29I	ATCGAT	1 cut(s)	2217
BsaAI	YACGTR	3 cut(s)	115, 1037, 2321
BsaBI	GATNNNNATC	3 cut(s)	645, 662, 2094
BsaI	GGTCTC	1 cut(s)	870
BsaJI	CCNNGG	3 cut(s)	276, 1136, 1358
BsaWI	WCCGGW	2 cut(s)	388, 2602
BsaXI	ACNNNNNCTCC	4 cut(s)	370, 400, 1354, 1384
Bsc4I	CCNNNNNNNGG	4 cut(s)	352, 1342, 1467, 2252
Bse118I	RCCGGY	1 cut(s)	2602
Bse1I	ACTGG	5 cut(s)	507, 833, 1135, 1813, 2099
Bse3DI	GCAATG	2 cut(s)	1550, 1883
Bse8I	GATNNNNATC	3 cut(s)	645, 662, 2094
BseBI	CCWGG	2 cut(s)	1070, 1138
BseCI	ATCGAT	1 cut(s)	2217
BseDI	CCNNGG	3 cut(s)	276, 1136, 1358
BseGI	GGATG	4 cut(s)	440, 945, 1888, 2172
BseJI	GATNNNNATC	3 cut(s)	645, 662, 2094
BseLI	CCNNNNNNNGG	4 cut(s)	352, 1342, 1467, 2252
BseMI	GCAATG	2 cut(s)	1550, 1883
BseMII	CTCAG	7 cut(s)	714, 802, 912, 1067, 1106, 2015, 2182
BseNI	ACTGG	5 cut(s)	507, 833, 1135, 1813, 2099
BseSI	GKGCMC	1 cut(s)	1137
BseXI	GCAGC	3 cut(s)	1366, 2512, 2654
BsgI	GTGCAG	1 cut(s)	779
Bsh1236I	CGCG	2 cut(s)	2283, 2647
BshFI	GGCC	2 cut(s)	913, 1135
BshNI	GGYRCC	1 cut(s)	1811
BshTI	ACCGGT	1 cut(s)	2602
BshVI	ATCGAT	1 cut(s)	2217
BsiHKAI	GWGCWC	1 cut(s)	2120
BsiHKCI	CYCGRG	2 cut(s)	2111, 2408
BsiSI	CCGG	3 cut(s)	389, 910, 2603
BslFI	GGGAC	3 cut(s)	481, 1096, 1581
BslI	CCNNNNNNNGG	4 cut(s)	352, 1342, 1467, 2252
BsmAI	GTCTC	5 cut(s)	870, 1055, 1266, 1799, 2004
BsmBI	CGTCTC	1 cut(s)	1266
BsmFI	GGGAC	3 cut(s)	481, 1096, 1581
BsnI	GGCC	2 cut(s)	913, 1135
Bso31I	GGTCTC	1 cut(s)	870
BsoBI	CYCGRG	2 cut(s)	2111, 2408
Bsp119I	TTCGAA	1 cut(s)	2083
Bsp120I	GGGCCC	1 cut(s)	1133
Bsp1286I	GDGCHC	2 cut(s)	1137, 2120
Bsp19I	CCATGG	1 cut(s)	276
BspACI	CCGC	5 cut(s)	213, 1336, 1480, 2393, 2647
BspANI	GGCC	2 cut(s)	913, 1135
BspCNI	CTCAG	7 cut(s)	715, 801, 913, 1068, 1107, 2014, 2181
BspDI	ATCGAT	1 cut(s)	2217
BspFNI	CGCG	2 cut(s)	2283, 2647
BspLI	GGNNCC	5 cut(s)	1135, 1392, 1569, 1570, 1813
BspMAI	CTGCAG	1 cut(s)	2198
BspMI	ACCTGC	2 cut(s)	1211, 2292
BspOI	GCTAGC	1 cut(s)	962
BspPI	GGATC	4 cut(s)	1148, 1159, 1421, 2090
BspQI	GCTCTTC	1 cut(s)	2129
BspT104I	TTCGAA	1 cut(s)	2083
BspT107I	GGYRCC	1 cut(s)	1811
BspTNI	GGTCTC	1 cut(s)	870
BsrDI	GCAATG	2 cut(s)	1550, 1883
BsrFI	RCCGGY	1 cut(s)	2602
BsrI	ACTGG	5 cut(s)	507, 833, 1135, 1813, 2099
BssAI	RCCGGY	1 cut(s)	2602
BssECI	CCNNGG	3 cut(s)	276, 1136, 1358
BssT1I	CCWWGG	2 cut(s)	276, 1358
Bst2UI	CCWGG	2 cut(s)	1070, 1138
Bst4CI	ACNGT	8 cut(s)	193, 268, 1260, 1772, 2023, 2389, 2696, 2803
Bst6I	CTCTTC	8 cut(s)	88, 108, 114, 804, 1088, 1842, 2129, 2713
BstBAI	YACGTR	3 cut(s)	115, 1037, 2321
BstBI	TTCGAA	1 cut(s)	2083
BstC8I	GCNNGC	4 cut(s)	805, 960, 2067, 2640
BstDEI	CTNAG	8 cut(s)	164, 723, 788, 921, 1076, 1115, 2001, 2168
BstDSI	CCRYGG	1 cut(s)	276
BstENI	CCTNNNNNAGG	1 cut(s)	1465
BstF5I	GGATG	4 cut(s)	440, 945, 1888, 2172
BstFNI	CGCG	2 cut(s)	2283, 2647
BstH2I	RGCGCY	1 cut(s)	2505
BstHHI	GCGC	3 cut(s)	2504, 2647, 2830
BstMAI	GTCTC	5 cut(s)	870, 1055, 1266, 1799, 2004
BstMWI	GCNNNNNNNGC	9 cut(s)	412, 482, 634, 1004, 1547, 2239, 2522, 2534, 2644
BstNI	CCWGG	2 cut(s)	1070, 1138
BstNSI	RCATGY	2 cut(s)	2069, 2075
BstSCI	CCNGG	2 cut(s)	1068, 1136
BstSFI	CTRYAG	2 cut(s)	1449, 2194
BstSLI	GKGCMC	1 cut(s)	1137
BstUI	CGCG	2 cut(s)	2283, 2647
BstV1I	GCAGC	3 cut(s)	1366, 2512, 2654
BstV2I	GAAGAC	2 cut(s)	443, 2390
BstX2I	RGATCY	2 cut(s)	640, 1367
BstYI	RGATCY	2 cut(s)	640, 1367
Bsu15I	ATCGAT	1 cut(s)	2217
BsuRI	GGCC	2 cut(s)	913, 1135
BsuTUI	ATCGAT	1 cut(s)	2217
BtgI	CCRYGG	1 cut(s)	276
BtrI	CACGTC	1 cut(s)	757
BtsCI	GGATG	4 cut(s)	440, 945, 1888, 2172
BtsI	GCAGTG	4 cut(s)	525, 2316, 2427, 2523
BtsIMutI	CAGTG	6 cut(s)	525, 1128, 2316, 2427, 2523, 2701
BveI	ACCTGC	2 cut(s)	1211, 2292
Cac8I	GCNNGC	4 cut(s)	805, 960, 2067, 2640
CfoI	GCGC	3 cut(s)	2504, 2647, 2830
Cfr10I	RCCGGY	1 cut(s)	2602
Cfr13I	GGNCC	7 cut(s)	206, 1133, 1134, 1568, 1595, 1912, 2605
ClaI	ATCGAT	1 cut(s)	2217
CseI	GACGC	1 cut(s)	2849
Csp6I	GTAC	6 cut(s)	264, 784, 859, 1226, 2385, 2804
CspAI	ACCGGT	1 cut(s)	2602
CviAII	CATG	8 cut(s)	128, 277, 482, 650, 1709, 1996, 2066, 2072
CviQI	GTAC	6 cut(s)	264, 784, 859, 1226, 2385, 2804
DdeI	CTNAG	8 cut(s)	164, 723, 788, 921, 1076, 1115, 2001, 2168
Eam1104I	CTCTTC	8 cut(s)	88, 108, 114, 804, 1088, 1842, 2129, 2713
EarI	CTCTTC	8 cut(s)	88, 108, 114, 804, 1088, 1842, 2129, 2713
Ecl136II	GAGCTC	1 cut(s)	2118
Eco130I	CCWWGG	2 cut(s)	276, 1358
Eco24I	GRGCYC	2 cut(s)	1137, 2120
Eco31I	GGTCTC	1 cut(s)	870
Eco47I	GGWCC	5 cut(s)	206, 1568, 1595, 1912, 2605
Eco53kI	GAGCTC	1 cut(s)	2118
Eco57I	CTGAAG	2 cut(s)	1128, 1866
Eco72I	CACGTG	2 cut(s)	115, 1037
Eco88I	CYCGRG	2 cut(s)	2111, 2408
EcoICRI	GAGCTC	1 cut(s)	2118
EcoNI	CCTNNNNNAGG	1 cut(s)	1465
EcoO109I	RGGNCCY	2 cut(s)	1134, 1568
EcoRI	GAATTC	1 cut(s)	2666
EcoRII	CCWGG	2 cut(s)	1068, 1136
EcoT14I	CCWWGG	2 cut(s)	276, 1358
EcoT22I	ATGCAT	1 cut(s)	1885
EcoT38I	GRGCYC	2 cut(s)	1137, 2120
ErhI	CCWWGG	2 cut(s)	276, 1358
Esp3I	CGTCTC	1 cut(s)	1266
FaeI	CATG	8 cut(s)	131, 280, 485, 653, 1712, 1999, 2069, 2075
FalI	AAGNNNNNCTT	4 cut(s)	366, 398, 1604, 1636
FaqI	GGGAC	3 cut(s)	481, 1096, 1581
FatI	CATG	8 cut(s)	127, 276, 481, 649, 1708, 1995, 2065, 2071
FauI	CCCGC	2 cut(s)	1343, 2386
FbaI	TGATCA	2 cut(s)	363, 1860
Fnu4HI	GCNGC	5 cut(s)	214, 1355, 1481, 2526, 2643
FokI	GGATG	4 cut(s)	427, 952, 1875, 2159
FriOI	GRGCYC	2 cut(s)	1137, 2120
Fsp4HI	GCNGC	5 cut(s)	214, 1355, 1481, 2526, 2643
GlaI	GCGC	3 cut(s)	2503, 2646, 2829
GluI	GCNGC	5 cut(s)	214, 1355, 1481, 2526, 2643
GsuI	CTGGAG	1 cut(s)	1577
HaeII	RGCGCY	1 cut(s)	2505
HaeIII	GGCC	2 cut(s)	913, 1135
HapII	CCGG	3 cut(s)	389, 910, 2603
HgaI	GACGC	1 cut(s)	2849
HhaI	GCGC	3 cut(s)	2504, 2647, 2830
Hin1II	CATG	8 cut(s)	131, 280, 485, 653, 1712, 1999, 2069, 2075
Hin6I	GCGC	3 cut(s)	2502, 2645, 2828
HinP1I	GCGC	3 cut(s)	2502, 2645, 2828
HincII	GTYRAC	1 cut(s)	892
HindII	GTYRAC	1 cut(s)	892
HindIII	AAGCTT	1 cut(s)	1205
HpaII	CCGG	3 cut(s)	389, 910, 2603
HphI	GGTGA	5 cut(s)	157, 445, 1408, 2479, 2703
Hpy166II	GTNNAC	3 cut(s)	206, 892, 1226
Hpy8I	GTNNAC	3 cut(s)	206, 892, 1226
Hpy99I	CGWCG	2 cut(s)	11, 758
HpyAV	CCTTC	8 cut(s)	29, 75, 169, 554, 757, 807, 2330, 2585
HpyCH4III	ACNGT	8 cut(s)	193, 268, 1260, 1772, 2023, 2389, 2696, 2803
HpyCH4IV	ACGT	7 cut(s)	114, 470, 756, 1036, 2320, 2742, 2782
HpyF10VI	GCNNNNNNNGC	9 cut(s)	412, 482, 634, 1004, 1547, 2239, 2522, 2534, 2644
HpyF3I	CTNAG	8 cut(s)	164, 723, 788, 921, 1076, 1115, 2001, 2168
HpySE526I	ACGT	7 cut(s)	114, 470, 756, 1036, 2320, 2742, 2782
Hsp92II	CATG	8 cut(s)	131, 280, 485, 653, 1712, 1999, 2069, 2075
HspAI	GCGC	3 cut(s)	2502, 2645, 2828
KflI	GGGWCCC	1 cut(s)	1568
Ksp22I	TGATCA	2 cut(s)	363, 1860
LguI	GCTCTTC	1 cut(s)	2129
LmnI	GCTCC	2 cut(s)	391, 1103
Lsp1109I	GCAGC	3 cut(s)	1366, 2512, 2654
LweI	GCATC	5 cut(s)	257, 325, 1134, 1897, 2181
MaeII	ACGT	7 cut(s)	114, 470, 756, 1036, 2320, 2742, 2782
MflI	RGATCY	2 cut(s)	640, 1367
MhlI	GDGCHC	2 cut(s)	1137, 2120
MluI	ACGCGT	1 cut(s)	2281
MlyI	GAGTC	2 cut(s)	1971, 2769
MmeI	TCCRAC	6 cut(s)	297, 913, 1564, 1782, 2568, 2682
Mph1103I	ATGCAT	1 cut(s)	1885
MseI	TTAA	5 cut(s)	834, 1194, 2076, 2403, 2769
MslI	CAYNNNNRTG	1 cut(s)	2070
MspI	CCGG	3 cut(s)	389, 910, 2603
MspR9I	CCNGG	2 cut(s)	1070, 1138
MvaI	CCWGG	2 cut(s)	1070, 1138
MvnI	CGCG	2 cut(s)	2283, 2647
MwoI	GCNNNNNNNGC	9 cut(s)	412, 482, 634, 1004, 1547, 2239, 2522, 2534, 2644
NcoI	CCATGG	1 cut(s)	276
NheI	GCTAGC	1 cut(s)	958
NlaIII	CATG	8 cut(s)	131, 280, 485, 653, 1712, 1999, 2069, 2075
NlaIV	GGNNCC	5 cut(s)	1135, 1392, 1569, 1570, 1813
NmuCI	GTSAC	3 cut(s)	867, 2270, 2518
NsiI	ATGCAT	1 cut(s)	1885
NspI	RCATGY	2 cut(s)	2069, 2075
NspV	TTCGAA	1 cut(s)	2083
PaeI	GCATGC	1 cut(s)	2069
PaqCI	CACCTGC	1 cut(s)	1211
PciI	ACATGT	1 cut(s)	2071
PciSI	GCTCTTC	1 cut(s)	2129
PcsI	WCGNNNNNNNCGW	2 cut(s)	120, 2779
PflMI	CCANNNNNTGG	1 cut(s)	352
PinAI	ACCGGT	1 cut(s)	2602
PkrI	GCNGC	5 cut(s)	215, 1356, 1482, 2527, 2644
PleI	GAGTC	2 cut(s)	1970, 2769
PmaCI	CACGTG	2 cut(s)	115, 1037
PmlI	CACGTG	2 cut(s)	115, 1037
PpsI	GAGTC	2 cut(s)	1970, 2769
Ppu21I	YACGTR	3 cut(s)	115, 1037, 2321
PpuMI	RGGWCCY	1 cut(s)	1568
PscI	ACATGT	1 cut(s)	2071
Psp124BI	GAGCTC	1 cut(s)	2120
Psp1406I	AACGTT	2 cut(s)	2742, 2782
Psp5II	RGGWCCY	1 cut(s)	1568
Psp6I	CCWGG	2 cut(s)	1068, 1136
PspCI	CACGTG	2 cut(s)	115, 1037
PspGI	CCWGG	2 cut(s)	1068, 1136
PspN4I	GGNNCC	5 cut(s)	1135, 1392, 1569, 1570, 1813
PspOMI	GGGCCC	1 cut(s)	1133
PspPI	GGNCC	7 cut(s)	206, 1133, 1134, 1568, 1595, 1912, 2605
PspPPI	RGGWCCY	1 cut(s)	1568
PstI	CTGCAG	1 cut(s)	2198
PsuI	RGATCY	2 cut(s)	640, 1367
RsaI	GTAC	6 cut(s)	265, 785, 860, 1227, 2386, 2805
RsaNI	GTAC	6 cut(s)	264, 784, 859, 1226, 2385, 2804
RseI	CAYNNNNRTG	1 cut(s)	2070
SacI	GAGCTC	1 cut(s)	2120
SapI	GCTCTTC	1 cut(s)	2129
SaqAI	TTAA	5 cut(s)	834, 1194, 2076, 2403, 2769
SatI	GCNGC	5 cut(s)	214, 1355, 1481, 2526, 2643
Sau96I	GGNCC	7 cut(s)	206, 1133, 1134, 1568, 1595, 1912, 2605
ScaI	AGTACT	1 cut(s)	2386
SchI	GAGTC	2 cut(s)	1971, 2769
ScrFI	CCNGG	2 cut(s)	1070, 1138
SduI	GDGCHC	2 cut(s)	1137, 2120
SfaNI	GCATC	5 cut(s)	257, 325, 1134, 1897, 2181
SfcI	CTRYAG	2 cut(s)	1449, 2194
SfuI	TTCGAA	1 cut(s)	2083
SinI	GGWCC	5 cut(s)	206, 1568, 1595, 1912, 2605
SmiMI	CAYNNNNRTG	1 cut(s)	2070
SmlI	CTYRAG	2 cut(s)	744, 1340
SmoI	CTYRAG	2 cut(s)	744, 1340
SphI	GCATGC	1 cut(s)	2069
SsiI	CCGC	5 cut(s)	213, 1336, 1480, 2393, 2647
SstI	GAGCTC	1 cut(s)	2120
StyD4I	CCNGG	2 cut(s)	1068, 1136
StyI	CCWWGG	2 cut(s)	276, 1358
TaaI	ACNGT	8 cut(s)	193, 268, 1260, 1772, 2023, 2389, 2696, 2803
TaiI	ACGT	7 cut(s)	117, 473, 759, 1039, 2323, 2745, 2785
TatI	WGTACW	2 cut(s)	263, 2384
TauI	GCSGC	2 cut(s)	216, 1483
Tru1I	TTAA	5 cut(s)	834, 1194, 2076, 2403, 2769
Tru9I	TTAA	5 cut(s)	834, 1194, 2076, 2403, 2769
TscAI	CASTG	6 cut(s)	525, 1135, 2316, 2427, 2523, 2701
TseFI	GTSAC	3 cut(s)	867, 2270, 2518
TseI	GCWGC	3 cut(s)	1354, 2525, 2642
Tsp45I	GTSAC	3 cut(s)	867, 2270, 2518
TspGWI	ACGGA	5 cut(s)	548, 832, 952, 2191, 2475
TspRI	CASTG	6 cut(s)	525, 1135, 2316, 2427, 2523, 2701
Van91I	CCANNNNNTGG	1 cut(s)	352
VpaK11BI	GGWCC	5 cut(s)	206, 1568, 1595, 1912, 2605
XagI	CCTNNNNNAGG	1 cut(s)	1465
XapI	RAATTY	4 cut(s)	349, 2189, 2209, 2666
XbaI	TCTAGA	1 cut(s)	1958
XceI	RCATGY	2 cut(s)	2069, 2075
ZrmI	AGTACT	1 cut(s)	2386
Zsp2I	ATGCAT	1 cut(s)	1885

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.