Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0004469

Physical Location & Seq

Genomic Coordinates Forward (+)

31193825 .. 31203562

Gene Structure 9738 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g32570.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2889 bp

ATGGATGATGAAGTTGTGCAGCGAGTTTTTCAAGAAGGAGGCCGCGACTATTTCCAACAGCAGCCCTCAACTTCGTCTTCGTCTTCCTCTATTCTGCAATCACTTCCTCTCCATGTGTCGTTTGATCGCGGGTATTATTTGCTGGTAAAATCTATCCAAGAGCTTAGGGAGAAAAAGGAGGGCCTTGTTACCGTTGGCATTGGTGGTCCAAGTGGTTCTGGTAAAACAAGCTTAGCAGAAAAGGTGCAATCTGTTATTGGTTGTACTGTTGTGTCAATGGAGAACTACCGTGATGGGATTGATGAAGGAAACGATCTCGGTTCAATAGACTTTGACTTGCTGGTCCGAAATCTTGAGGACTTGACAAAGGGTGAAGATACATTGGTTCCAGTTTTTGACTATCAACAAAAGAAACGTGTTGGTTCAACAACAATACAGAGTGCTTCATCTGGAGTGGTAATAGTTGATGGCACCTATGCGTTGCATGCAAAGTTACGCTCTTTGCTGGATATTCGAGTTGCAGTGGTTGGTGGTGTTCATTTCAGCCTTCTTTCCAAAGTTCGATATGATATTGGAGATTCTTGTTCACTGGATTATCTCATTGACAGCATTTTCCCATTGTTTAGGAAGCACATCGAACCGGACCTTCATCATGCACAGATTAGGATTAACAACAGCTTTGTCTCATCATTTAGGGAGGCAATCTACAAGCTGAAATGTCGGAGTGAGGCAGCAGAGGGACATTTCGCTACTGCCTTTCAAGAAAATGCTGCTCAAATTGATAATTTTATTGAGATGTACCTTAGGCCTCCTTCGGCAAGTGAAGAAGCACGGATTAATGATTGGATCAAGGTGCGTCAATCTGGTATAAGATACTATCTGTCACTTGGGGACCAGAGGATTGTTGACAAGAATTTCATCATCAGGCCAAAAGCAGAGTTTGAGGTTGGAAGGATGACTTTAGGTGGATTACTAGCTTTGGGATACGCTGTGGTTGTTAGCTACAAAAGAGCATCTAAATCGGTCAATACCGGCAATGTTTCATTGTCCCTTGAAACCATTGATAGTCTTGGTGAGACATTCATGGTGCTGAGGGGAACCAATAGAAAAACAGTTGGAACAGAAGCATTGAAGATGGGTATCAGTGAGCCTTGGATCACTAAATCATATCTGGAAATGATTCTTGAGAGCAAAGGCGTACCCCGCCTTAACACACCACCTCTTTTGTCAAATACGCCTGTGACCAGTAATCAGGACAGAATGATTGTCGCACCGAAACCAATCCGTGTTCCTCCAAACCTTGTTACTAGGCTTGAGGATCTATCTCAGCCATGGACTAGATCTCCAACAAAATCTACAATGGATCCTATAGTGGCCACATGGCATTTCATCTCATCAGATCCTTCCCAAGCTGATAGCTCAACCATAGACCACTCTCATAAAGCAACCACAGATCCTTCCTCTTTCAGGAATGGGATGAAACTCGCTCCAATGCCTGATTCATATGACTTAGATAGGGGATTGCTTCTTGCTGTCCAAGCGATTCAGGCACTATTGGAGAATAAAGGTTTTCCGGTTATAGTTGGAATTGGTGGTCCAAGTGGTTCTGGAAAGACTAGTTTGGCTCATAAAATGGCCAACATTGTTGGCTGTGAAGTAGTTTCCCTTGAAAGATACTATAAATCTGAACAAGTAAAGGATTTCAAGTATGATGACTTCAGCTCGCTCGATCTATCTTTACTTTCAAAAAACATTAATGACATAAGGAATGGTCAAAGGACAAAAGTACCCATGTTTGATTTGGAAACTGGTGCACGGAGTGGGTTCAAGGAACTTGAAGTTTCTGAAGATTGTGGAGTGATCATTTTCGAAGGAGTTTATGCTCTGCATCCAGATATCCGAAAATCACTTGACTTGTGGGTTGCTGTCGTTGGAGGTGTTCATTCGCATCTCATTTCTAGAGTTCAAAGGGATAAAAGTAAAGTGGGATGTTTTATGTCCCAGAATGACATCATGATGACAGTGTTTCCAATGTTCCAACAGTTCATTGAACCCCATCTGGTTCATGCACATCTCAAAATCCGGAATGACTTCGATCCTGTGCTTTCTCCAGAGAGCTCATTGTTTTTATTGAAGAGTAACAAGCAAGTGGCTTATCAAGATATATTAAAAATACTGGATCCTGTAAAGTTCTGCAGCTCAGTGCAGAATTTCATTGATTTATACTTGAAACTTCCTGGACTTCCTACCAATGAGCAGTTAACAGAGGGTGACTGCATTCGGGTCAGAATATGTGAGGGTAGATTCGCATTGCTGATACGGGAGCCTATACGAGAAGGGAACTTCATCATTCAACCTAAAGTGGATTTTGATATTAGCATCAGTACAGTTTCTGGACTTCTTAACCTTGGGTATCAAGCTGTAGCCTATATTGAAGCATCTGCTTTCATTTACCAAGATGGAAAGATTTTGATTGAGGTTGATCATCTACAAGATGTTCCAAACCCTTACCTACAGATCAAGGGGGTTGATAAAGATGCTGTGGCAGCTGCAGGGTCATTGCTTAAACTGGATGGTTCATATACTACCAAGAGTTATCTTCAAATCGTTCTGGAAAGATTACCAGCAGCGGGAAGAGGCTCAGGTGGGATTCACACTCAGCAAGCTGCAAGACTGCAGGAACTTGTGGAGTTCATTCAGTCTCAGGGCAGCAGTACAGCTTCAGAATCCTCGCCAATTAGGGAGGTTTCTTCAGTTGACGGGGTTATTGAAGATATGCAGTCAAGGATTAGAAGACTCGAGCGGTGGCATACAATCAATACGGTACTATGGACGTTTTTGATGTCTGCACTAGTTGGTTATTCGCTCTACCAAAGGAAGCGTCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004849 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006206 GO:0006213 GO:0006220 GO:0006221 GO:0006222 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008655 GO:0009058 GO:0009112 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009129 GO:0009130 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009173 GO:0009174 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0018130 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0019693 GO:0034404 GO:0034641 GO:0034654 GO:0042455 GO:0043094 GO:0043097 GO:0043174 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046049 GO:0046131 GO:0046132 GO:0046134 GO:0046390 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00240 ko00983 ko01100 map00240 map00983 map01100

Pfam Domains

Protein Families

Cytidylate_kin PRK

Protein Analysis

963

Amino Acids

106.93

Weight (kDa)

6.25

Isoelectric Point (pI)

41.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRK	PF00485	67 - 225	1.1e-07	Phosphoribulokinase / Uridine kinase family
PRK	PF00485	521 - 688	8.9e-18	Phosphoribulokinase / Uridine kinase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004469)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01460 AT2G01460 AT2G01460
fragaria_vesca	FvH4_4g32570 FvH4_4g32570 FvH4_4g32570 FvH4_4g32570 FvH4_4g32570 FvH4_4g32570 FvH4_4g32570 FvH4_4g32570 FvH4_4g32570 FvH4_4g32570
malus_domestica	MD13G1024500.v1.1 MD16G1027200.v1.1
prunus_persica	Prupe.1G326000_v2.0.a1 Prupe.1G326000_v2.0.a1 Prupe.1G326000_v2.0.a1 Prupe.1G326000_v2.0.a1 Prupe.1G326000_v2.0.a1 Prupe.1G326000_v2.0.a1
pyrus_communis	pycom16g02300
rosa_chinensis	RchiOBHm_Chr4g0441441
rosa_laevigata	RLG00000006092
rosa_multiflora	Rmu_sc0003360.1_g000006
rosa_roxburghii	Rroxscaffold_5G00382310
rosa_rugosa	Rorug04G0333700
rosa_samantha	Rh4AG385200 Rh4BG399400 Rh4CG414400 Rh4DG392000
rosa_wichuraiana	Rw4G033270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	341
AccB1I	GGYRCC	1 cut(s)	470
AccBSI	CCGCTC	1 cut(s)	2803
AccII	CGCG	2 cut(s)	45, 129
AccIII	TCCGGA	1 cut(s)	2082
AciI	CCGC	5 cut(s)	43, 129, 1204, 2630, 2803
AcoI	YGGCCR	2 cut(s)	1374, 1635
AcsI	RAATTY	2 cut(s)	913, 2209
AcuI	CTGAAG	4 cut(s)	1702, 1866, 2706, 2736
AdeI	CACNNNGTG	1 cut(s)	1820
AfaI	GTAC	7 cut(s)	265, 800, 1200, 1788, 2386, 2716, 2826
AfiI	CCNNNNNNNGG	2 cut(s)	1467, 2630
AflIII	ACRYGT	1 cut(s)	415
AhlI	ACTAGT	2 cut(s)	1616, 2851
AjnI	CCWGG	1 cut(s)	2236
AjuI	GAANNNNNNNTTGG	2 cut(s)	1483, 1515
Alw21I	GWGCWC	2 cut(s)	1816, 2120
Alw26I	GTCTC	3 cut(s)	688, 1070, 2706
Alw44I	GTGCAC	1 cut(s)	1812
AlwNI	CAGNNNCTG	1 cut(s)	2393
Ama87I	CYCGRG	1 cut(s)	2798
Aor13HI	TCCGGA	1 cut(s)	2082
AoxI	GGCC	6 cut(s)	40, 181, 806, 926, 1374, 1635
ApaLI	GTGCAC	1 cut(s)	1812
ApoI	RAATTY	2 cut(s)	913, 2209
ArsI	GACNNNNNNTTYG	1 cut(s)	2866
AseI	ATTAAT	2 cut(s)	837, 1755
Asp700I	GAANNNNTTC	2 cut(s)	1179, 2090
AspS9I	GGNCC	6 cut(s)	181, 206, 343, 643, 892, 1595
AsuHPI	GGTGA	3 cut(s)	383, 1085, 2282
AsuII	TTCGAA	1 cut(s)	1869
AvaI	CYCGRG	1 cut(s)	2798
AvaII	GGWCC	5 cut(s)	206, 343, 643, 892, 1595
AxyI	CCTNAGG	1 cut(s)	803
BaeGI	GKGCMC	1 cut(s)	1816
BaeI	ACNNNNGTAYC	4 cut(s)	369, 402, 1770, 1803
BalI	TGGCCA	2 cut(s)	1376, 1637
BamHI	GGATCC	2 cut(s)	1363, 2179
BanI	GGYRCC	1 cut(s)	470
BanII	GRGCYC	1 cut(s)	2120
BarI	GAAGNNNNNNTAC	2 cut(s)	1700, 1732
BbsI	GAAGAC	3 cut(s)	69, 75, 2800
Bbv12I	GWGCWC	2 cut(s)	1816, 2120
BbvCI	CCTCAGC	1 cut(s)	1091
BccI	CCATC	6 cut(s)	287, 461, 1129, 2064, 2453, 2567
BcgI	CGANNNNNNTGC	2 cut(s)	1002, 1036
BciT130I	CCWGG	1 cut(s)	2238
BciVI	GTATCC	1 cut(s)	977
BclI	TGATCA	2 cut(s)	1860, 2482
BcoDI	GTCTC	3 cut(s)	688, 1070, 2706
BcuI	ACTAGT	2 cut(s)	1616, 2851
BfaI	CTAG	6 cut(s)	974, 1308, 1338, 1617, 1959, 2852
BfmI	CTRYAG	6 cut(s)	1368, 2194, 2421, 2513, 2550, 2675
BfuI	GTATCC	1 cut(s)	977
BglII	AGATCT	1 cut(s)	1340
BlpI	GCTNAGC	1 cut(s)	232
Bme1390I	CCNGG	1 cut(s)	2238
Bme18I	GGWCC	5 cut(s)	206, 343, 643, 892, 1595
BmeT110I	CYCGRG	1 cut(s)	2798
BmgT120I	GGNCC	6 cut(s)	181, 206, 343, 643, 892, 1595
BmiI	GGNNCC	7 cut(s)	387, 472, 893, 1099, 1365, 2181, 2325
BmrFI	CCNGG	1 cut(s)	2238
BmsI	GCATC	6 cut(s)	1022, 1897, 1957, 2388, 2447, 2527
BpiI	GAAGAC	3 cut(s)	69, 75, 2800
BpmI	CTGGAG	2 cut(s)	471, 2094
Bpu10I	CCTNAGC	3 cut(s)	164, 1091, 2641
Bpu1102I	GCTNAGC	1 cut(s)	232
Bpu14I	TTCGAA	1 cut(s)	1869
BpuEI	CTTGAG	3 cut(s)	374, 1205, 1334
BsaBI	GATNNNNATC	1 cut(s)	1139
BsaJI	CCNNGG	3 cut(s)	1151, 1331, 2407
BsaWI	WCCGGW	3 cut(s)	640, 1573, 2082
BsaXI	ACNNNNNCTCC	4 cut(s)	93, 123, 1327, 1357
Bsc4I	CCNNNNNNNGG	2 cut(s)	1467, 2630
Bse118I	RCCGGY	1 cut(s)	1031
Bse1I	ACTGG	6 cut(s)	389, 594, 1245, 1813, 2181, 2574
Bse21I	CCTNAGG	1 cut(s)	803
Bse3DI	GCAATG	3 cut(s)	1042, 2309, 2558
Bse8I	GATNNNNATC	1 cut(s)	1139
BseAI	TCCGGA	1 cut(s)	2082
BseBI	CCWGG	1 cut(s)	2238
BseDI	CCNNGG	3 cut(s)	1151, 1331, 2407
BseGI	GGATG	6 cut(s)	10, 960, 1482, 1888, 1994, 2578
BseJI	GATNNNNATC	1 cut(s)	1139
BseLI	CCNNNNNNNGG	2 cut(s)	1467, 2630
BseMI	GCAATG	3 cut(s)	1042, 2309, 2558
BseMII	CTCAG	6 cut(s)	1082, 1340, 2214, 2655, 2672, 2717
BseNI	ACTGG	6 cut(s)	389, 594, 1245, 1813, 2181, 2574
BseSI	GKGCMC	1 cut(s)	1816
BsgI	GTGCAG	3 cut(s)	38, 2225, 2832
Bsh1236I	CGCG	2 cut(s)	45, 129
BshFI	GGCC	6 cut(s)	42, 183, 808, 928, 1376, 1637
BshNI	GGYRCC	1 cut(s)	470
BsiHKAI	GWGCWC	2 cut(s)	1816, 2120
BsiHKCI	CYCGRG	1 cut(s)	2798
BsiSI	CCGG	4 cut(s)	641, 1032, 1574, 2083
BslFI	GGGAC	4 cut(s)	753, 905, 1033, 1984
BslI	CCNNNNNNNGG	2 cut(s)	1467, 2630
BsmAI	GTCTC	3 cut(s)	688, 1070, 2706
BsmFI	GGGAC	4 cut(s)	753, 905, 1033, 1984
BsmI	GAATGC	1 cut(s)	2277
BsnI	GGCC	6 cut(s)	42, 183, 808, 928, 1376, 1637
BsoBI	CYCGRG	1 cut(s)	2798
Bsp119I	TTCGAA	1 cut(s)	1869
Bsp1286I	GDGCHC	2 cut(s)	1816, 2120
Bsp13I	TCCGGA	1 cut(s)	2082
Bsp1720I	GCTNAGC	1 cut(s)	232
Bsp19I	CCATGG	1 cut(s)	1331
BspACI	CCGC	5 cut(s)	43, 129, 1204, 2630, 2803
BspANI	GGCC	6 cut(s)	42, 183, 808, 928, 1376, 1637
BspCNI	CTCAG	6 cut(s)	1083, 1339, 2213, 2654, 2671, 2716
BspEI	TCCGGA	1 cut(s)	2082
BspFNI	CGCG	2 cut(s)	45, 129
BspHI	TCATGA	1 cut(s)	2013
BspLI	GGNNCC	7 cut(s)	387, 472, 893, 1099, 1365, 2181, 2325
BspMAI	CTGCAG	3 cut(s)	2198, 2554, 2679
BspT104I	TTCGAA	1 cut(s)	1869
BspT107I	GGYRCC	1 cut(s)	470
BsrBI	CCGCTC	1 cut(s)	2803
BsrDI	GCAATG	3 cut(s)	1042, 2309, 2558
BsrFI	RCCGGY	1 cut(s)	1031
BsrI	ACTGG	6 cut(s)	389, 594, 1245, 1813, 2181, 2574
BssAI	RCCGGY	1 cut(s)	1031
BssECI	CCNNGG	3 cut(s)	1151, 1331, 2407
BssT1I	CCWWGG	3 cut(s)	1151, 1331, 2407
Bst2UI	CCWGG	1 cut(s)	2238
Bst4CI	ACNGT	8 cut(s)	193, 268, 290, 1114, 2023, 2043, 2389, 2824
Bst6I	CTCTTC	2 cut(s)	2129, 2629
BstBI	TTCGAA	1 cut(s)	1869
BstC8I	GCNNGC	3 cut(s)	486, 1724, 2664
BstDSI	CCRYGG	1 cut(s)	1331
BstENI	CCTNNNNNAGG	1 cut(s)	1465
BstF5I	GGATG	6 cut(s)	10, 960, 1482, 1888, 1994, 2578
BstFNI	CGCG	2 cut(s)	45, 129
BstMAI	GTCTC	3 cut(s)	688, 1070, 2706
BstMWI	GCNNNNNNNGC	5 cut(s)	485, 1203, 1538, 1547, 2546
BstNI	CCWGG	1 cut(s)	2238
BstNSI	RCATGY	1 cut(s)	488
BstSCI	CCNGG	1 cut(s)	2236
BstSFI	CTRYAG	6 cut(s)	1368, 2194, 2421, 2513, 2550, 2675
BstSLI	GKGCMC	1 cut(s)	1816
BstUI	CGCG	2 cut(s)	45, 129
BstV2I	GAAGAC	3 cut(s)	69, 75, 2800
BstX2I	RGATCY	6 cut(s)	1318, 1340, 1363, 1399, 1453, 2179
BstYI	RGATCY	6 cut(s)	1318, 1340, 1363, 1399, 1453, 2179
Bsu36I	CCTNAGG	1 cut(s)	803
BsuI	GTATCC	1 cut(s)	977
BsuRI	GGCC	6 cut(s)	42, 183, 808, 928, 1376, 1637
BtgI	CCRYGG	1 cut(s)	1331
BtsCI	GGATG	6 cut(s)	10, 960, 1482, 1888, 1994, 2578
BtsI	GCAGTG	1 cut(s)	528
BtsIMutI	CAGTG	5 cut(s)	528, 587, 1150, 2028, 2208
Cac8I	GCNNGC	3 cut(s)	486, 1724, 2664
CaiI	CAGNNNCTG	1 cut(s)	2393
CciI	TCATGA	1 cut(s)	2013
Cfr10I	RCCGGY	1 cut(s)	1031
Cfr13I	GGNCC	6 cut(s)	181, 206, 343, 643, 892, 1595
CseI	GACGC	2 cut(s)	845, 2870
Csp6I	GTAC	7 cut(s)	264, 799, 1199, 1787, 2385, 2715, 2825
CspCI	CAANNNNNGTGG	2 cut(s)	1206, 1241
CviAII	CATG	9 cut(s)	113, 485, 653, 1084, 1332, 1380, 1792, 2014, 2066
CviQI	GTAC	7 cut(s)	264, 799, 1199, 1787, 2385, 2715, 2825
DraIII	CACNNNGTG	1 cut(s)	1820
DrdI	GACNNNNNNGTC	1 cut(s)	341
DseDI	GACNNNNNNGTC	1 cut(s)	341
EaeI	YGGCCR	2 cut(s)	1374, 1635
Eam1104I	CTCTTC	2 cut(s)	2129, 2629
EarI	CTCTTC	2 cut(s)	2129, 2629
Ecl136II	GAGCTC	1 cut(s)	2118
Eco130I	CCWWGG	3 cut(s)	1151, 1331, 2407
Eco147I	AGGCCT	1 cut(s)	808
Eco24I	GRGCYC	1 cut(s)	2120
Eco32I	GATATC	1 cut(s)	1897
Eco47I	GGWCC	5 cut(s)	206, 343, 643, 892, 1595
Eco53kI	GAGCTC	1 cut(s)	2118
Eco57I	CTGAAG	4 cut(s)	1702, 1866, 2706, 2736
Eco81I	CCTNAGG	1 cut(s)	803
Eco88I	CYCGRG	1 cut(s)	2798
EcoICRI	GAGCTC	1 cut(s)	2118
EcoNI	CCTNNNNNAGG	1 cut(s)	1465
EcoO109I	RGGNCCY	1 cut(s)	181
EcoRII	CCWGG	1 cut(s)	2236
EcoRV	GATATC	1 cut(s)	1897
EcoT14I	CCWWGG	3 cut(s)	1151, 1331, 2407
EcoT38I	GRGCYC	1 cut(s)	2120
ErhI	CCWWGG	3 cut(s)	1151, 1331, 2407
FaeI	CATG	9 cut(s)	116, 488, 656, 1087, 1335, 1383, 1795, 2017, 2069
FalI	AAGNNNNNCTT	2 cut(s)	943, 975
FaqI	GGGAC	4 cut(s)	753, 905, 1033, 1984
FatI	CATG	9 cut(s)	112, 484, 652, 1083, 1331, 1379, 1791, 2013, 2065
FauI	CCCGC	3 cut(s)	122, 1211, 2623
FauNDI	CATATG	1 cut(s)	1504
FbaI	TGATCA	2 cut(s)	1860, 2482
FokI	GGATG	6 cut(s)	17, 967, 1489, 1875, 2001, 2585
FriOI	GRGCYC	1 cut(s)	2120
FspBI	CTAG	6 cut(s)	974, 1308, 1338, 1617, 1959, 2852
GsuI	CTGGAG	2 cut(s)	471, 2094
HaeIII	GGCC	6 cut(s)	42, 183, 808, 928, 1376, 1637
HapII	CCGG	4 cut(s)	641, 1032, 1574, 2083
HgaI	GACGC	2 cut(s)	845, 2870
Hin1II	CATG	9 cut(s)	116, 488, 656, 1087, 1335, 1383, 1795, 2017, 2069
HincII	GTYRAC	3 cut(s)	907, 2262, 2758
HindII	GTYRAC	3 cut(s)	907, 2262, 2758
HindIII	AAGCTT	1 cut(s)	229
HinfI	GANTC	8 cut(s)	578, 1180, 1499, 1543, 2304, 2650, 2726, 2796
HpaI	GTTAAC	1 cut(s)	2262
HpaII	CCGG	4 cut(s)	641, 1032, 1574, 2083
HphI	GGTGA	3 cut(s)	383, 1085, 2282
Hpy166II	GTNNAC	5 cut(s)	587, 907, 1814, 2262, 2758
Hpy188I	TCNGA	8 cut(s)	347, 723, 1399, 1687, 1846, 1901, 2288, 2725
Hpy8I	GTNNAC	5 cut(s)	587, 907, 1814, 2262, 2758
HpyCH4III	ACNGT	8 cut(s)	193, 268, 290, 1114, 2023, 2043, 2389, 2824
HpyCH4IV	ACGT	2 cut(s)	415, 2834
HpyF10VI	GCNNNNNNNGC	5 cut(s)	485, 1203, 1538, 1547, 2546
HpySE526I	ACGT	2 cut(s)	415, 2834
Hsp92II	CATG	9 cut(s)	116, 488, 656, 1087, 1335, 1383, 1795, 2017, 2069
Kpn2I	TCCGGA	1 cut(s)	2082
Ksp22I	TGATCA	2 cut(s)	1860, 2482
KspAI	GTTAAC	1 cut(s)	2262
LmnI	GCTCC	2 cut(s)	1492, 2323
LweI	GCATC	6 cut(s)	1022, 1897, 1957, 2388, 2447, 2527
MaeI	CTAG	6 cut(s)	974, 1308, 1338, 1617, 1959, 2852
MaeII	ACGT	2 cut(s)	415, 2834
MaeIII	GTNAC	7 cut(s)	187, 492, 882, 1240, 1303, 2138, 2270
MbiI	CCGCTC	1 cut(s)	2803
MflI	RGATCY	6 cut(s)	1318, 1340, 1363, 1399, 1453, 2179
MhlI	GDGCHC	2 cut(s)	1816, 2120
MlsI	TGGCCA	2 cut(s)	1376, 1637
MluCI	AATT	6 cut(s)	777, 784, 913, 1587, 2209, 2736
MluNI	TGGCCA	2 cut(s)	1376, 1637
MlyI	GAGTC	1 cut(s)	2790
MmeI	TCCRAC	8 cut(s)	79, 701, 928, 1096, 1370, 1564, 1912, 2062
Mox20I	TGGCCA	2 cut(s)	1376, 1637
MroI	TCCGGA	1 cut(s)	2082
MroXI	GAANNNNTTC	2 cut(s)	1179, 2090
MscI	TGGCCA	2 cut(s)	1376, 1637
MseI	TTAA	8 cut(s)	669, 837, 1209, 1755, 2168, 2261, 2403, 2565
MslI	CAYNNNNRTG	1 cut(s)	2015
Msp20I	TGGCCA	2 cut(s)	1376, 1637
MspA1I	CMGCKG	2 cut(s)	2549, 2630
MspI	CCGG	4 cut(s)	641, 1032, 1574, 2083
MspR9I	CCNGG	1 cut(s)	2238
Mva1269I	GAATGC	1 cut(s)	2277
MvaI	CCWGG	1 cut(s)	2238
MvnI	CGCG	2 cut(s)	45, 129
MwoI	GCNNNNNNNGC	5 cut(s)	485, 1203, 1538, 1547, 2546
NcoI	CCATGG	1 cut(s)	1331
NdeI	CATATG	1 cut(s)	1504
NlaIII	CATG	9 cut(s)	116, 488, 656, 1087, 1335, 1383, 1795, 2017, 2069
NlaIV	GGNNCC	7 cut(s)	387, 472, 893, 1099, 1365, 2181, 2325
NmuCI	GTSAC	3 cut(s)	882, 1240, 2270
NspI	RCATGY	1 cut(s)	488
NspV	TTCGAA	1 cut(s)	1869
PaeI	GCATGC	1 cut(s)	488
PaeR7I	CTCGAG	1 cut(s)	2798
PagI	TCATGA	1 cut(s)	2013
PceI	AGGCCT	1 cut(s)	808
PctI	GAATGC	1 cut(s)	2277
PdmI	GAANNNNTTC	2 cut(s)	1179, 2090
PfeI	GAWTC	7 cut(s)	578, 1180, 1499, 1543, 2304, 2650, 2726
PfoI	TCCNGGA	1 cut(s)	2236
PleI	GAGTC	1 cut(s)	2790
PpsI	GAGTC	1 cut(s)	2790
PshBI	ATTAAT	2 cut(s)	837, 1755
Psp124BI	GAGCTC	1 cut(s)	2120
Psp6I	CCWGG	1 cut(s)	2236
PspGI	CCWGG	1 cut(s)	2236
PspN4I	GGNNCC	7 cut(s)	387, 472, 893, 1099, 1365, 2181, 2325
PspPI	GGNCC	6 cut(s)	181, 206, 343, 643, 892, 1595
PspXI	VCTCGAGB	1 cut(s)	2798
PstI	CTGCAG	3 cut(s)	2198, 2554, 2679
PstNI	CAGNNNCTG	1 cut(s)	2393
PsuI	RGATCY	6 cut(s)	1318, 1340, 1363, 1399, 1453, 2179
PvuII	CAGCTG	1 cut(s)	2549
RsaI	GTAC	7 cut(s)	265, 800, 1200, 1788, 2386, 2716, 2826
RsaNI	GTAC	7 cut(s)	264, 799, 1199, 1787, 2385, 2715, 2825
RseI	CAYNNNNRTG	1 cut(s)	2015
SacI	GAGCTC	1 cut(s)	2120
SaqAI	TTAA	8 cut(s)	669, 837, 1209, 1755, 2168, 2261, 2403, 2565
Sau96I	GGNCC	6 cut(s)	181, 206, 343, 643, 892, 1595
SchI	GAGTC	1 cut(s)	2790
ScrFI	CCNGG	1 cut(s)	2238
SduI	GDGCHC	2 cut(s)	1816, 2120
SfaNI	GCATC	6 cut(s)	1022, 1897, 1957, 2388, 2447, 2527
SfcI	CTRYAG	6 cut(s)	1368, 2194, 2421, 2513, 2550, 2675
Sfr274I	CTCGAG	1 cut(s)	2798
SfuI	TTCGAA	1 cut(s)	1869
SinI	GGWCC	5 cut(s)	206, 343, 643, 892, 1595
SlaI	CTCGAG	1 cut(s)	2798
SmiMI	CAYNNNNRTG	1 cut(s)	2015
SmlI	CTYRAG	4 cut(s)	353, 1184, 1313, 2798
SmoI	CTYRAG	4 cut(s)	353, 1184, 1313, 2798
SpeI	ACTAGT	2 cut(s)	1616, 2851
SphI	GCATGC	1 cut(s)	488
Sse9I	AATT	6 cut(s)	777, 784, 913, 1587, 2209, 2736
SseBI	AGGCCT	1 cut(s)	808
SsiI	CCGC	5 cut(s)	43, 129, 1204, 2630, 2803
SspMI	CTAG	6 cut(s)	974, 1308, 1338, 1617, 1959, 2852
SstI	GAGCTC	1 cut(s)	2120
StuI	AGGCCT	1 cut(s)	808
StyD4I	CCNGG	1 cut(s)	2236
StyI	CCWWGG	3 cut(s)	1151, 1331, 2407
TaaI	ACNGT	8 cut(s)	193, 268, 290, 1114, 2023, 2043, 2389, 2824
TaiI	ACGT	2 cut(s)	418, 2837
TaqI	TCGA	7 cut(s)	514, 562, 636, 1728, 1869, 2094, 2799
TaqII	GACCGA	1 cut(s)	1012
TasI	AATT	6 cut(s)	777, 784, 913, 1587, 2209, 2736
TatI	WGTACW	3 cut(s)	263, 2384, 2714
TauI	GCSGC	1 cut(s)	45
TfiI	GAWTC	7 cut(s)	578, 1180, 1499, 1543, 2304, 2650, 2726
Tru1I	TTAA	8 cut(s)	669, 837, 1209, 1755, 2168, 2261, 2403, 2565
Tru9I	TTAA	8 cut(s)	669, 837, 1209, 1755, 2168, 2261, 2403, 2565
TscAI	CASTG	5 cut(s)	528, 594, 1150, 2028, 2208
TseFI	GTSAC	3 cut(s)	882, 1240, 2270
Tsp45I	GTSAC	3 cut(s)	882, 1240, 2270
TspGWI	ACGGA	3 cut(s)	847, 1274, 1831
TspRI	CASTG	5 cut(s)	528, 594, 1150, 2028, 2208
VneI	GTGCAC	1 cut(s)	1812
VpaK11BI	GGWCC	5 cut(s)	206, 343, 643, 892, 1595
VspI	ATTAAT	2 cut(s)	837, 1755
XagI	CCTNNNNNAGG	1 cut(s)	1465
XapI	RAATTY	2 cut(s)	913, 2209
XbaI	TCTAGA	1 cut(s)	1958
XceI	RCATGY	1 cut(s)	488
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1798
XhoI	CTCGAG	1 cut(s)	2798
XmnI	GAANNNNTTC	2 cut(s)	1179, 2090
XspI	CTAG	6 cut(s)	974, 1308, 1338, 1617, 1959, 2852

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.