Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0004469

Physical Location & Seq

Genomic Coordinates Reverse (-)

1469423 .. 1476483

Gene Structure 7061 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g02300.25

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2862 bp

ATGGACGACGATGTCGTCAAGCGAGTCTTCCAAGAAGGAGGCCGCGACTATTTCCAGCAGCAACCCTCCACTTCCTCCTCCTCAATTCTCCAATCGCTTCCTCTCCATGTGTCTTTCGATCCCGGATATTATTTGCTAGTAAAGTCTATCCAAGAACTTAGAGAGAAAAAAGAGGGTCTTGTAACAGTTGGCATTGGTGGTCCAAGTGGTTCTGGTAAAACAAGCTTAGCAGAAAAGGTGGCATCTGTTATTGGTTGCACTGTTGTGTCAATGGAGAACTATCGTGATGGATTTGATGAATGGAATGATCTGGGTTCAATAGATTTTGATATGCTAGTCAGAAATCTCGAGGATTTGACAAAAGGTGAGGATGCATTGATTCCAGTATTTGACTATCAACAAAAGAAACGTGTTGGTTCAAAAACAATAAAGAGTGCTTCATCTGGGGTGGTAATAGTTGATGGTACCTATGCTTTGCATGCAAAGCTTCGCTCTTTGCTAGATATTCGAGTTGCAGTGGTTGGTGGTGTTCATTTTAGCCTTCTGTCCAAAGTTCAATATGATATTGGAGATTCTTGTTCACTGGATTACCTTATTGACAGCATTTTCCCATTGTTCAGGAAGCACATTGAACCAGACCTTCATCATGCACAGATTAGGATTAACAACAGCTTTGTCTCATCATTTAGGGAGGCAATCTACAAGCTGAAATGCCGGAGTGAGGCAGCAGAGGGGCATCTTGCTTATGCTTTTCAAGGAAGTGAAGCTCAAATAGATAATTTTATTGAGATGTATCTTAGGCCTCCTTCGGCAAGTGAAGAAGCGCGGATAAATGATTGGATCAAGGTGCGTCAATCGGGTATAAGATATTATCTGTCACTGGGGGACCAGAGGATTGTTGACAAAAATTTCATTATCAGGCCAAAAGCTGAGTTTGAGCAGGTTGGAAGGATGACTCTGGGCGGGTTATTGGCTTTGGGATATGCTGTGGTTGTTAGTTACAAACGAGCATCAAAATCGGTCGATAATGGCAATGTTTCCTTGTCACTTGAGACCATTGATACCCTTGGTGAGACATTCATGGTGCTGAGGGGCACAGATAGAAAAACAGTTGGAACTGAAGCATTGAAGATGGGTATCACCGAGCCTTGGATCACTAAATCATATCTTGAAATGATTCTTGAGAGCAAAGGTGTACCTCGCCTTAATACACCACCCCTTTTGTCAAATACATCCATGACCAGTAATCAGGACAAAACAATTGTTGCACCAAGACCAATTCGTGTTCCTCCAAACCTTGTTACTCGGCTTGAGGATCTGTCTCAGCCATGGACTAGATCTCCAACAAAATCTAAGATGGAACCTATATTAGCGACATGGCATTTCATCTCATCTGATCCTTCCCAAGCTGAAAGCTCAACCATAGATCCTTCCTCTTTCAGGGATTCCATGCAACTTGCTCCAATGCCTGATTCGTATGACTTGGATCGAGGATTGCTTCTTGCTGTGCAAGCAATACAGGCATTGTTGGAGAATAAAGGGTTTCCAGTTATAGTTGGAATTGGAGGTCCAAGTGGTTCTGGGAAAACTAGTTTGGCTCATAAAATGGCAAACATAGTAGGATGTGAAGTTGTTTCGCTTGAAAGCTATTATAAATCTGAACAAGTTAAGGATTTCAAGTATGATGACTTCAACTCGATCGATCTGTCTTTGCTTTCAAAAAACATTGATGACATAAGGAATGGTCAAAGGACAAAAGTACCTGTATTTGATTTGGAAACTGGTGCTCGGAGTGGCTTAAAGGAACTTGAAGTTTCTGAAGACTGTGGAGTGATTATTTTTGAAGGAGTTTATGCTTTGCATCCAAATATCCGAAAATCACTTGACTTGTGGATTGCTGTTGTTGGAGGTGTTCATTCACACCTCATTTCTAGAGTTCAAAGGGATAAAAGTAGAGTGGGGTGTTTTATGTCCCAGAATGAGATCATGATGACAGTGTTTCCAATGTTCCAGCAGTTCATTGAACCCCATCTTGTTCATGCACACCTCAAAATTCGAAATGACTTTGATCCAGTGCTTTCTCCTGAGAGCTCATTATTTGTATTGAAGAGTAACAAGCAAGTGGCATATCAAGATATTTTAAAAATACTGGATCCTGCAAAGTTCTGCAGCTCTATGCAGAATTTCACTGATATATACTTGAAGCTCCCTGGACTTCCTACTAATTGTCAGTTAACAGAGGGTGACTGCATTAGGGTCAGAATATGTGAGGGCAGATTTGCATTGCTGATACGGGAGCCTATCAGAGAAGGAAACTTCATCATCCAACCGAAAGTGGATTTCGATATTAGCATTAGTACAGTTGCTGGGCTTCTTAACCTTGGGTATCAAGCTGTAGCTTATATTGAAGCATCTGCGTTCATCTACCAAGACACAAAGATTTTAGTTGAGGTCGATCATCTACAAGATTCCCCAAACCCTTACTTGCAAATCAAGGGGGTTGATAAAGATGCTGTAGCAGCTGCAGGATCAATGCTTAAGCTGGATGGTTCATATACTACAAAGAGCTATCTTCAAATAGTTCTGGAAAGATTGCCAGCGTTGGGAAGAGGCTCGGGTGGAATTCACACTCAGCAAGCTGCAAGGTTGCAGGAACTTGTTGAATTTATTCAATCTCAGGGCAGCAGTTCAGCTTCTGAATCGTCGCCGATCAGGGAAGTTTCTCCGGTTGAAGGAGTTATCGAAGAAATGCAGTCAAGGATTAGAAGACTTGAGCGGTGGCATACAATCAATACGGTACTCTGGACATTTTTAATGTCTGCGCTCGTTGGTTATTCGCTCTACCAAAGGAAGCGTCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004849 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006206 GO:0006213 GO:0006220 GO:0006221 GO:0006222 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008655 GO:0009058 GO:0009112 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009129 GO:0009130 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009173 GO:0009174 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0018130 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0019693 GO:0034404 GO:0034641 GO:0034654 GO:0042455 GO:0043094 GO:0043097 GO:0043174 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046049 GO:0046131 GO:0046132 GO:0046134 GO:0046390 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00240 ko00983 ko01100 map00240 map00983 map01100

Pfam Domains

Protein Families

Cytidylate_kin PRK

Protein Analysis

954

Amino Acids

106.17

Weight (kDa)

6.06

Isoelectric Point (pI)

44.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004469)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01460 AT2G01460 AT2G01460
fragaria_vesca	FvH4_4g32570 FvH4_4g32570 FvH4_4g32570 FvH4_4g32570 FvH4_4g32570 FvH4_4g32570 FvH4_4g32570 FvH4_4g32570 FvH4_4g32570 FvH4_4g32570
malus_domestica	MD13G1024500.v1.1 MD16G1027200.v1.1
prunus_persica	Prupe.1G326000_v2.0.a1 Prupe.1G326000_v2.0.a1 Prupe.1G326000_v2.0.a1 Prupe.1G326000_v2.0.a1 Prupe.1G326000_v2.0.a1 Prupe.1G326000_v2.0.a1
pyrus_communis	pycom16g02300
rosa_chinensis	RchiOBHm_Chr4g0441441
rosa_laevigata	RLG00000006092
rosa_multiflora	Rmu_sc0003360.1_g000006
rosa_roxburghii	Rroxscaffold_5G00382310
rosa_rugosa	Rorug04G0333700
rosa_samantha	Rh4AG385200 Rh4BG399400 Rh4CG414400 Rh4DG392000
rosa_wichuraiana	Rw4G033270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1653
AasI	GACNNNNNNGTC	2 cut(s)	11, 14
Acc36I	ACCTGC	1 cut(s)	931
Acc65I	GGTACC	1 cut(s)	464
AccB1I	GGYRCC	1 cut(s)	464
AccBSI	CCGCTC	1 cut(s)	2776
AccII	CGCG	2 cut(s)	45, 826
AciI	CCGC	4 cut(s)	43, 826, 963, 2776
AcsI	RAATTY	5 cut(s)	907, 2052, 2182, 2622, 2663
AcuI	CTGAAG	2 cut(s)	1140, 1839
AfaI	GTAC	5 cut(s)	466, 1197, 1761, 2359, 2799
AfiI	CCNNNNNNNGG	5 cut(s)	721, 1149, 1440, 2603, 2732
AflII	CTTAAG	1 cut(s)	2537
AflIII	ACRYGT	1 cut(s)	409
AhlI	ACTAGT	1 cut(s)	1589
AjnI	CCWGG	1 cut(s)	2209
AjuI	GAANNNNNNNTTGG	4 cut(s)	1456, 1488, 1577, 1609
AleI	CACNNNNGTG	1 cut(s)	263
Alw21I	GWGCWC	2 cut(s)	1789, 2093
Alw26I	GTCTC	4 cut(s)	682, 1046, 1067, 1326
AlwNI	CAGNNNCTG	2 cut(s)	2366, 2696
Ama87I	CYCGRG	2 cut(s)	347, 2614
AoxI	GGCC	3 cut(s)	40, 800, 920
ApeKI	GCWGC	7 cut(s)	58, 725, 2169, 2519, 2522, 2639, 2682
ApoI	RAATTY	5 cut(s)	907, 2052, 2182, 2622, 2663
ArsI	GACNNNNNNTTYG	1 cut(s)	2839
Asp700I	GAANNNNTTC	2 cut(s)	1176, 2667
Asp718I	GGTACC	1 cut(s)	464
AspLEI	GCGC	2 cut(s)	826, 2824
AspS9I	GGNCC	3 cut(s)	200, 886, 1568
AsuC2I	CCSGG	1 cut(s)	123
AsuHPI	GGTGA	4 cut(s)	377, 1082, 1132, 2255
AsuII	TTCGAA	1 cut(s)	2056
AvaI	CYCGRG	2 cut(s)	347, 2614
AvaII	GGWCC	3 cut(s)	200, 886, 1568
BaeGI	GKGCMC	1 cut(s)	1097
BaeI	ACNNNNGTAYC	2 cut(s)	1743, 1776
BamHI	GGATCC	1 cut(s)	2152
BanI	GGYRCC	1 cut(s)	464
BanII	GRGCYC	1 cut(s)	2093
BarI	GAAGNNNNNNTAC	2 cut(s)	1673, 1705
BbsI	GAAGAC	3 cut(s)	19, 1827, 2773
Bbv12I	GWGCWC	2 cut(s)	1789, 2093
BbvCI	CCTCAGC	1 cut(s)	1088
BbvI	GCAGC	7 cut(s)	70, 737, 2181, 2509, 2531, 2626, 2694
BccI	CCATC	6 cut(s)	281, 455, 1126, 1351, 2037, 2540
BcgI	CGANNNNNNTGC	2 cut(s)	999, 1033
BciT130I	CCWGG	1 cut(s)	2211
BcnI	CCSGG	1 cut(s)	123
BcoDI	GTCTC	4 cut(s)	682, 1046, 1067, 1326
BcuI	ACTAGT	1 cut(s)	1589
BfaI	CTAG	6 cut(s)	137, 335, 500, 1335, 1590, 1932
BfmI	CTRYAG	4 cut(s)	2167, 2394, 2514, 2523
BfrI	CTTAAG	1 cut(s)	2537
BfuAI	ACCTGC	1 cut(s)	931
BglII	AGATCT	1 cut(s)	1337
BisI	GCNGC	8 cut(s)	43, 59, 726, 2170, 2520, 2523, 2640, 2683
BlpI	GCTNAGC	1 cut(s)	226
BlsI	GCNGC	8 cut(s)	44, 60, 727, 2171, 2521, 2524, 2641, 2684
Bme1390I	CCNGG	2 cut(s)	123, 2211
Bme18I	GGWCC	3 cut(s)	200, 886, 1568
BmeT110I	CYCGRG	2 cut(s)	347, 2614
BmgT120I	GGNCC	3 cut(s)	200, 886, 1568
BmiI	GGNNCC	5 cut(s)	466, 887, 1362, 2154, 2298
BmrFI	CCNGG	2 cut(s)	123, 2211
BmrI	ACTGGG	1 cut(s)	890
BmsI	GCATC	7 cut(s)	251, 361, 745, 1019, 1870, 2420, 2500
BmuI	ACTGGG	1 cut(s)	890
BpiI	GAAGAC	3 cut(s)	19, 1827, 2773
Bpu10I	CCTNAGC	1 cut(s)	1088
Bpu1102I	GCTNAGC	1 cut(s)	226
Bpu14I	TTCGAA	1 cut(s)	2056
BpuEI	CTTGAG	4 cut(s)	1070, 1202, 1331, 2792
BpuMI	CCSGG	1 cut(s)	123
Bsa29I	ATCGAT	1 cut(s)	1701
BsaBI	GATNNNNATC	1 cut(s)	1136
BsaI	GGTCTC	1 cut(s)	1046
BsaJI	CCNNGG	5 cut(s)	1066, 1148, 1328, 2209, 2380
BsaWI	WCCGGW	1 cut(s)	2725
BsaXI	ACNNNNNCTCC	2 cut(s)	1324, 1354
Bsc4I	CCNNNNNNNGG	5 cut(s)	721, 1149, 1440, 2603, 2732
Bse1I	ACTGG	8 cut(s)	383, 588, 885, 1242, 1547, 1786, 2072, 2154
Bse3DI	GCAATG	2 cut(s)	1039, 2282
Bse8I	GATNNNNATC	1 cut(s)	1136
BseBI	CCWGG	1 cut(s)	2211
BseCI	ATCGAT	1 cut(s)	1701
BseDI	CCNNGG	5 cut(s)	1066, 1148, 1328, 2209, 2380
BseGI	GGATG	7 cut(s)	376, 957, 1232, 1628, 1861, 2322, 2551
BseJI	GATNNNNATC	1 cut(s)	1136
BseLI	CCNNNNNNNGG	5 cut(s)	721, 1149, 1440, 2603, 2732
BseMI	GCAATG	2 cut(s)	1039, 2282
BseMII	CTCAG	6 cut(s)	921, 1079, 1337, 2076, 2645, 2690
BseNI	ACTGG	8 cut(s)	383, 588, 885, 1242, 1547, 1786, 2072, 2154
BseRI	GAGGAG	2 cut(s)	67, 70
BseSI	GKGCMC	1 cut(s)	1097
BseXI	GCAGC	7 cut(s)	70, 737, 2181, 2509, 2531, 2626, 2694
BseYI	CCCAGC	1 cut(s)	2366
Bsh1236I	CGCG	2 cut(s)	45, 826
Bsh1285I	CGRYCG	2 cut(s)	1023, 1701
BshFI	GGCC	3 cut(s)	42, 802, 922
BshNI	GGYRCC	1 cut(s)	464
BshVI	ATCGAT	1 cut(s)	1701
BsiEI	CGRYCG	2 cut(s)	1023, 1701
BsiHKAI	GWGCWC	2 cut(s)	1789, 2093
BsiHKCI	CYCGRG	2 cut(s)	347, 2614
BsiSI	CCGG	3 cut(s)	123, 715, 2726
BslFI	GGGAC	2 cut(s)	899, 1957
BslI	CCNNNNNNNGG	5 cut(s)	721, 1149, 1440, 2603, 2732
BsmAI	GTCTC	4 cut(s)	682, 1046, 1067, 1326
BsmFI	GGGAC	2 cut(s)	899, 1957
BsnI	GGCC	3 cut(s)	42, 802, 922
Bso31I	GGTCTC	1 cut(s)	1046
BsoBI	CYCGRG	2 cut(s)	347, 2614
Bsp119I	TTCGAA	1 cut(s)	2056
Bsp1286I	GDGCHC	3 cut(s)	1097, 1789, 2093
Bsp1720I	GCTNAGC	1 cut(s)	226
Bsp19I	CCATGG	1 cut(s)	1328
BspACI	CCGC	4 cut(s)	43, 826, 963, 2776
BspANI	GGCC	3 cut(s)	42, 802, 922
BspCNI	CTCAG	6 cut(s)	922, 1080, 1336, 2077, 2644, 2689
BspDI	ATCGAT	1 cut(s)	1701
BspFNI	CGCG	2 cut(s)	45, 826
BspHI	TCATGA	1 cut(s)	1986
BspLI	GGNNCC	5 cut(s)	466, 887, 1362, 2154, 2298
BspMAI	CTGCAG	2 cut(s)	2171, 2527
BspMI	ACCTGC	1 cut(s)	931
BspT104I	TTCGAA	1 cut(s)	2056
BspT107I	GGYRCC	1 cut(s)	464
BspTI	CTTAAG	1 cut(s)	2537
BspTNI	GGTCTC	1 cut(s)	1046
BsrBI	CCGCTC	1 cut(s)	2776
BsrDI	GCAATG	2 cut(s)	1039, 2282
BsrI	ACTGG	8 cut(s)	383, 588, 885, 1242, 1547, 1786, 2072, 2154
BssECI	CCNNGG	5 cut(s)	1066, 1148, 1328, 2209, 2380
BssT1I	CCWWGG	4 cut(s)	1066, 1148, 1328, 2380
Bst2UI	CCWGG	1 cut(s)	2211
Bst4CI	ACNGT	7 cut(s)	187, 262, 1111, 1826, 1996, 2362, 2797
Bst6I	CTCTTC	2 cut(s)	2102, 2602
BstAFI	CTTAAG	1 cut(s)	2537
BstBI	TTCGAA	1 cut(s)	2056
BstC8I	GCNNGC	4 cut(s)	480, 1512, 2598, 2637
BstDSI	CCRYGG	1 cut(s)	1328
BstENI	CCTNNNNNAGG	1 cut(s)	1438
BstF5I	GGATG	7 cut(s)	376, 957, 1232, 1628, 1861, 2322, 2551
BstFNI	CGCG	2 cut(s)	45, 826
BstHHI	GCGC	2 cut(s)	826, 2824
BstMAI	GTCTC	4 cut(s)	682, 1046, 1067, 1326
BstMCI	CGRYCG	2 cut(s)	1023, 1701
BstMWI	GCNNNNNNNGC	5 cut(s)	479, 484, 1511, 1520, 2519
BstNI	CCWGG	1 cut(s)	2211
BstNSI	RCATGY	1 cut(s)	482
BstSCI	CCNGG	2 cut(s)	121, 2209
BstSFI	CTRYAG	4 cut(s)	2167, 2394, 2514, 2523
BstSLI	GKGCMC	1 cut(s)	1097
BstUI	CGCG	2 cut(s)	45, 826
BstV1I	GCAGC	7 cut(s)	70, 737, 2181, 2509, 2531, 2626, 2694
BstV2I	GAAGAC	3 cut(s)	19, 1827, 2773
BstX2I	RGATCY	4 cut(s)	1315, 1337, 1426, 2152
BstYI	RGATCY	4 cut(s)	1315, 1337, 1426, 2152
Bsu15I	ATCGAT	1 cut(s)	1701
BsuRI	GGCC	3 cut(s)	42, 802, 922
BsuTUI	ATCGAT	1 cut(s)	1701
BtgI	CCRYGG	1 cut(s)	1328
BtsCI	GGATG	7 cut(s)	376, 957, 1232, 1628, 1861, 2322, 2551
BtsI	GCAGTG	1 cut(s)	522
BtsIMutI	CAGTG	7 cut(s)	258, 522, 581, 878, 2001, 2079, 2187
BveI	ACCTGC	1 cut(s)	931
Cac8I	GCNNGC	4 cut(s)	480, 1512, 2598, 2637
CaiI	CAGNNNCTG	2 cut(s)	2366, 2696
CciI	TCATGA	1 cut(s)	1986
CfoI	GCGC	2 cut(s)	826, 2824
Cfr13I	GGNCC	3 cut(s)	200, 886, 1568
ClaI	ATCGAT	1 cut(s)	1701
CseI	GACGC	2 cut(s)	839, 2843
Csp6I	GTAC	5 cut(s)	465, 1196, 1760, 2358, 2798
CspCI	CAANNNNNGTGG	2 cut(s)	1203, 1238
CviQI	GTAC	5 cut(s)	465, 1196, 1760, 2358, 2798
DraI	TTTAAA	1 cut(s)	2142
DrdI	GACNNNNNNGTC	2 cut(s)	11, 14
DseDI	GACNNNNNNGTC	2 cut(s)	11, 14
Eam1104I	CTCTTC	2 cut(s)	2102, 2602
EarI	CTCTTC	2 cut(s)	2102, 2602
Ecl136II	GAGCTC	1 cut(s)	2091
Eco130I	CCWWGG	4 cut(s)	1066, 1148, 1328, 2380
Eco147I	AGGCCT	1 cut(s)	802
Eco24I	GRGCYC	1 cut(s)	2093
Eco31I	GGTCTC	1 cut(s)	1046
Eco47I	GGWCC	3 cut(s)	200, 886, 1568
Eco53kI	GAGCTC	1 cut(s)	2091
Eco57I	CTGAAG	2 cut(s)	1140, 1839
Eco88I	CYCGRG	2 cut(s)	347, 2614
EcoICRI	GAGCTC	1 cut(s)	2091
EcoNI	CCTNNNNNAGG	1 cut(s)	1438
EcoRI	GAATTC	1 cut(s)	2622
EcoRII	CCWGG	1 cut(s)	2209
EcoT14I	CCWWGG	4 cut(s)	1066, 1148, 1328, 2380
EcoT22I	ATGCAT	1 cut(s)	376
EcoT38I	GRGCYC	1 cut(s)	2093
ErhI	CCWWGG	4 cut(s)	1066, 1148, 1328, 2380
FalI	AAGNNNNNCTT	4 cut(s)	11, 43, 162, 194
FaqI	GGGAC	2 cut(s)	899, 1957
FauI	CCCGC	1 cut(s)	956
Fnu4HI	GCNGC	8 cut(s)	43, 59, 726, 2170, 2520, 2523, 2640, 2683
FokI	GGATG	7 cut(s)	383, 964, 1219, 1635, 1848, 2309, 2558
FriOI	GRGCYC	1 cut(s)	2093
Fsp4HI	GCNGC	8 cut(s)	43, 59, 726, 2170, 2520, 2523, 2640, 2683
FspBI	CTAG	6 cut(s)	137, 335, 500, 1335, 1590, 1932
GlaI	GCGC	2 cut(s)	825, 2823
GluI	GCNGC	8 cut(s)	43, 59, 726, 2170, 2520, 2523, 2640, 2683
GsaI	CCCAGC	1 cut(s)	2370
HaeIII	GGCC	3 cut(s)	42, 802, 922
HapII	CCGG	3 cut(s)	123, 715, 2726
HgaI	GACGC	2 cut(s)	839, 2843
HhaI	GCGC	2 cut(s)	826, 2824
Hin6I	GCGC	2 cut(s)	824, 2822
HinP1I	GCGC	2 cut(s)	824, 2822
HincII	GTYRAC	2 cut(s)	901, 2235
HindII	GTYRAC	2 cut(s)	901, 2235
HindIII	AAGCTT	2 cut(s)	223, 485
HinfI	GANTC	9 cut(s)	24, 379, 572, 955, 1177, 1445, 1472, 2468, 2699
HpaI	GTTAAC	1 cut(s)	2235
HpaII	CCGG	3 cut(s)	123, 715, 2726
HphI	GGTGA	4 cut(s)	377, 1082, 1132, 2255
Hpy166II	GTNNAC	4 cut(s)	581, 901, 1196, 2235
Hpy188I	TCNGA	9 cut(s)	341, 1396, 1660, 1791, 1819, 1874, 2261, 2306, 2698
Hpy8I	GTNNAC	4 cut(s)	581, 901, 1196, 2235
Hpy99I	CGWCG	2 cut(s)	11, 2707
HpyCH4III	ACNGT	7 cut(s)	187, 262, 1111, 1826, 1996, 2362, 2797
HpyCH4IV	ACGT	1 cut(s)	409
HpyF10VI	GCNNNNNNNGC	5 cut(s)	479, 484, 1511, 1520, 2519
HpySE526I	ACGT	1 cut(s)	409
HspAI	GCGC	2 cut(s)	824, 2822
KpnI	GGTACC	1 cut(s)	468
KspAI	GTTAAC	1 cut(s)	2235
LmnI	GCTCC	3 cut(s)	1465, 2211, 2296
Lsp1109I	GCAGC	7 cut(s)	70, 737, 2181, 2509, 2531, 2626, 2694
LweI	GCATC	7 cut(s)	251, 361, 745, 1019, 1870, 2420, 2500
MaeI	CTAG	6 cut(s)	137, 335, 500, 1335, 1590, 1932
MaeII	ACGT	1 cut(s)	409
MaeIII	GTNAC	7 cut(s)	181, 876, 998, 1044, 1300, 2111, 2243
MbiI	CCGCTC	1 cut(s)	2776
MboII	GAAGA	9 cut(s)	19, 830, 1141, 1832, 2119, 2564, 2619, 2756, 2778
MfeI	CAATTG	1 cut(s)	1260
MflI	RGATCY	4 cut(s)	1315, 1337, 1426, 2152
MhlI	GDGCHC	3 cut(s)	1097, 1789, 2093
MlyI	GAGTC	2 cut(s)	33, 949
MmeI	TCCRAC	7 cut(s)	925, 1093, 1367, 1509, 1537, 1885, 2350
Mph1103I	ATGCAT	1 cut(s)	376
MroXI	GAANNNNTTC	2 cut(s)	1176, 2667
MseI	TTAA	9 cut(s)	663, 1206, 1668, 1799, 2141, 2234, 2376, 2538, 2813
MslI	CAYNNNNRTG	1 cut(s)	263
MspA1I	CMGCKG	1 cut(s)	2522
MspCI	CTTAAG	1 cut(s)	2537
MspI	CCGG	3 cut(s)	123, 715, 2726
MspR9I	CCNGG	2 cut(s)	123, 2211
MunI	CAATTG	1 cut(s)	1260
MvaI	CCWGG	1 cut(s)	2211
MvnI	CGCG	2 cut(s)	45, 826
MwoI	GCNNNNNNNGC	5 cut(s)	479, 484, 1511, 1520, 2519
NciI	CCSGG	1 cut(s)	123
NcoI	CCATGG	1 cut(s)	1328
NlaIV	GGNNCC	5 cut(s)	466, 887, 1362, 2154, 2298
NmeAIII	GCCGAG	1 cut(s)	1285
NmuCI	GTSAC	3 cut(s)	876, 1044, 2243
NsiI	ATGCAT	1 cut(s)	376
NspI	RCATGY	1 cut(s)	482
NspV	TTCGAA	1 cut(s)	2056
OliI	CACNNNNGTG	1 cut(s)	263
PaeI	GCATGC	1 cut(s)	482
PaeR7I	CTCGAG	1 cut(s)	347
PagI	TCATGA	1 cut(s)	1986
PceI	AGGCCT	1 cut(s)	802
PcsI	WCGNNNNNNNCGW	1 cut(s)	12
PdmI	GAANNNNTTC	2 cut(s)	1176, 2667
PfeI	GAWTC	7 cut(s)	379, 572, 1177, 1445, 1472, 2468, 2699
PflFI	GACNNNGTC	1 cut(s)	11
PfoI	TCCNGGA	1 cut(s)	121
PkrI	GCNGC	8 cut(s)	44, 60, 727, 2171, 2521, 2524, 2641, 2684
Ple19I	CGATCG	1 cut(s)	1701
PleI	GAGTC	2 cut(s)	32, 949
PpsI	GAGTC	2 cut(s)	32, 949
PsiI	TTATAA	1 cut(s)	1653
Psp124BI	GAGCTC	1 cut(s)	2093
Psp6I	CCWGG	1 cut(s)	2209
PspFI	CCCAGC	1 cut(s)	2366
PspGI	CCWGG	1 cut(s)	2209
PspN4I	GGNNCC	5 cut(s)	466, 887, 1362, 2154, 2298
PspPI	GGNCC	3 cut(s)	200, 886, 1568
PstI	CTGCAG	2 cut(s)	2171, 2527
PstNI	CAGNNNCTG	2 cut(s)	2366, 2696
PsuI	RGATCY	4 cut(s)	1315, 1337, 1426, 2152
PsyI	GACNNNGTC	1 cut(s)	11
PvuI	CGATCG	1 cut(s)	1701
PvuII	CAGCTG	1 cut(s)	2522
RsaI	GTAC	5 cut(s)	466, 1197, 1761, 2359, 2799
RsaNI	GTAC	5 cut(s)	465, 1196, 1760, 2358, 2798
RseI	CAYNNNNRTG	1 cut(s)	263
SacI	GAGCTC	1 cut(s)	2093
SaqAI	TTAA	9 cut(s)	663, 1206, 1668, 1799, 2141, 2234, 2376, 2538, 2813
SatI	GCNGC	8 cut(s)	43, 59, 726, 2170, 2520, 2523, 2640, 2683
Sau96I	GGNCC	3 cut(s)	200, 886, 1568
SchI	GAGTC	2 cut(s)	33, 949
ScrFI	CCNGG	2 cut(s)	123, 2211
SduI	GDGCHC	3 cut(s)	1097, 1789, 2093
SfaNI	GCATC	7 cut(s)	251, 361, 745, 1019, 1870, 2420, 2500
SfcI	CTRYAG	4 cut(s)	2167, 2394, 2514, 2523
Sfr274I	CTCGAG	1 cut(s)	347
SfuI	TTCGAA	1 cut(s)	2056
SinI	GGWCC	3 cut(s)	200, 886, 1568
SlaI	CTCGAG	1 cut(s)	347
SmiMI	CAYNNNNRTG	1 cut(s)	263
SmlI	CTYRAG	6 cut(s)	347, 1049, 1181, 1310, 2537, 2771
SmoI	CTYRAG	6 cut(s)	347, 1049, 1181, 1310, 2537, 2771
SpeI	ACTAGT	1 cut(s)	1589
SphI	GCATGC	1 cut(s)	482
SseBI	AGGCCT	1 cut(s)	802
SsiI	CCGC	4 cut(s)	43, 826, 963, 2776
SspMI	CTAG	6 cut(s)	137, 335, 500, 1335, 1590, 1932
SstI	GAGCTC	1 cut(s)	2093
StuI	AGGCCT	1 cut(s)	802
StyD4I	CCNGG	2 cut(s)	121, 2209
StyI	CCWWGG	4 cut(s)	1066, 1148, 1328, 2380
TaaI	ACNGT	7 cut(s)	187, 262, 1111, 1826, 1996, 2362, 2797
TaiI	ACGT	1 cut(s)	412
TaqII	GACCGA	1 cut(s)	1009
TatI	WGTACW	1 cut(s)	2357
TauI	GCSGC	1 cut(s)	45
TfiI	GAWTC	7 cut(s)	379, 572, 1177, 1445, 1472, 2468, 2699
Tru1I	TTAA	9 cut(s)	663, 1206, 1668, 1799, 2141, 2234, 2376, 2538, 2813
Tru9I	TTAA	9 cut(s)	663, 1206, 1668, 1799, 2141, 2234, 2376, 2538, 2813
TscAI	CASTG	7 cut(s)	265, 522, 588, 885, 2001, 2079, 2194
TseFI	GTSAC	3 cut(s)	876, 1044, 2243
TseI	GCWGC	7 cut(s)	58, 725, 2169, 2519, 2522, 2639, 2682
Tsp45I	GTSAC	3 cut(s)	876, 1044, 2243
TspRI	CASTG	7 cut(s)	265, 522, 588, 885, 2001, 2079, 2194
Tth111I	GACNNNGTC	1 cut(s)	11
Vha464I	CTTAAG	1 cut(s)	2537
VpaK11BI	GGWCC	3 cut(s)	200, 886, 1568
XagI	CCTNNNNNAGG	1 cut(s)	1438
XapI	RAATTY	5 cut(s)	907, 2052, 2182, 2622, 2663
XbaI	TCTAGA	1 cut(s)	1931
XceI	RCATGY	1 cut(s)	482
XhoI	CTCGAG	1 cut(s)	347
XmnI	GAANNNNTTC	2 cut(s)	1176, 2667
XspI	CTAG	6 cut(s)	137, 335, 500, 1335, 1590, 1932
Zsp2I	ATGCAT	1 cut(s)	376

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.