AT2G01830

Histidine kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0004318
Physical Location & Seq
Reverse (-)
362983 .. 369707
6725 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G01830.4

Sequence Viewer

Length: 3174 bp
ATGAACTGGGCACTCAACAATCATCAAGAAGAAGAAGAAGAGCCACGAAGAATTGAAATTTCTGATTCCGAGTCACTAGAAAACTTGAAAAGCAGCGATTTTTATCAACTGGGTGGTGGTGGTGCTCTGAATTCGTCAGAAAAGCCGAGAAAGATCGATTTTTGGCGTTCGGGGTTGATGGGTTTTGCGAAGATGCAGCAGCAGCAACAGCTTCAGCATTCAGTGGCGGTGAAGATGAACAATAATAATAATAACGATCTAATGGGTAATAAAAAAGGGTCAACTTTCATACAAGAACATCGAGCATTGTTACCAAAAGCTTTGATTCTGTGGATCATCATTGTTGGGTTTATAAGCAGTGGGATTTATCAGTGGATGGATGATGCTAATAAGATTAGAAGGGAAGAGGTTTTGGTCAGCATGTGTGATCAAAGAGCTAGAATGTTGCAGGATCAATTTAGTGTTAGTGTTAATCATGTTCATGCTTTGGCTATTCTCGTCTCCACTTTTCATTACCACAAGAACCCTTCTGCAATTGATCAGGAGACATTTGCGGAGTACACGGCAAGAACAGCATTTGAGAGACCGTTGCTAAGTGGAGTGGCTTATGCTGAAAAAGTTGTGAATTTTGAGAGGGAGATGTTTGAGCGGCAGCACAATTGGGTTATAAAGACAATGGATAGAGGAGAGCCTTCACCGGTTAGGGATGAGTATGCTCCTGTTATATTCTCTCAAGATAGTGTCTCTTACCTTGAGTCACTCGATATGATGTCAGGCGAGGAGGATCGTGAGAATATTTTGCGAGCTAGAGAAACCGGAAAAGCTGTCTTGACTAGCCCTTTTAGGTTGTTGGAAACTCACCATCTCGGAGTTGTGTTGACATTCCCTGTCTACAAGTCTTCTCTTCCTGAAAATCCGACTGTCGAAGAGCGTATTGCAGCCACTGCAGGGTACCTTGGTGGTGCGTTTGATGTGGAGTCTCTAGTCGAGAATTTACTTGGTCAGCTTGCTGGTAACCAAGCAATAGTTGTGCATGTGTATGATATCACCAATGCATCAGATCCACTTGTCATGTATGGTAATCAAGATGAAGAAGCCGACAGATCTCTCTCTCATGAGAGCAAGCTCGATTTTGGAGACCCCTTCAGGAAACATAAGATGATATGCAGGTACCACCAAAAGGCACCAATACCGTTGAATGTGCTCACAACTGTGCCATTGTTCTTTGCGATTGGTTTCTTGGTGGGTTATATACTGTATGGTGCAGCTATGCACATAGTAAAAGTCGAAGATGATTTCCATGAAATGCAAGAGCTTAAAGTTCGAGCAGAAGCTGCTGATGTCGCTAAATCGCAGTTTCTTGCTACCGTGTCTCACGAGATCAGGACACCAATGAATGGCATTCTCGGAATGCTTGCTATGCTCCTAGATACAGAACTAAGCTCGACACAGAGAGATTACGCTCAAACCGCTCAAGTATGTGGTAAAGCTTTGATTGCATTGATAAATGAGGTTCTTGATCGCGCCAAGATTGAAGCTGGAAAGCTGGAGTTGGAATCAGTACCATTTGATATCCGTTCAATATTGGATGATGTCCTTTCTCTATTCTCTGAGGAGTCAAGGAACAAAAGCATTGAGCTCGCGGTTTTCGTTTCAGACAAAGTACCAGAGATAGTCAAAGGAGATTCAGGGAGATTTAGACAGATAATCATAAACCTTGTTGGAAATTCGGTTAAATTCACAGAGAAAGGACATATCTTTGTTAAAGTCCATCTTGCGGAACAATCAAAAGATGAATCTGAACCGAAAAATGCATTGAATGGTGGAGTGTCTGAAGAAATGATCGTTGTTTCCAAACAGTCAAGTTACAACACATTGAGCGGTTACGAAGCTGCTGATGGTCGGAATAGCTGGGATTCATTCAAGCATTTGGTCTCTGAGGAGCAGTCATTATCGGAGTTTGATATTTCTAGCAATGTTAGGCTTATGGTTTCAATCGAAGACACGGGTATTGGAATCCCTTTAGTTGCGCAAGGCCGTGTGTTTATGCCGTTTATGCAAGCAGATAGCTCGACTTCAAGAAACTATGGAGGTACTGGTATTGGTTTGAGTATAAGCAAGTGTCTTGTTGAACTTATGCGTGGTCAGATAAATTTCATAAGCCGGCCTCATATTGGAAGCACGTTCTGGTTCACGGCTGTTTTAGAGAAATGCGATAAATGCAGTGCGATTAACCATATGAAGAAACCTAATGTGGAACACTTGCCTTCTACTTTTAAAGGAATGAAAGCTATAGTTGTTGATGCTAAGCCTGTTAGAGCTGCTGTGACTAGATACCATATGAAAAGACTCGGAATCAATGTTGATGTCGTGACAAGTCTCAAAACCGCTGTTGTTGCAGCTGCTGCGTTTGAAAGAAACGGTTCTCCTCTCCCAACAAAACCGCAACTTGATATGATCTTAGTAGAGAAAGATTCATGGATTTCAACTGAAGATAATGACTCAGAGATTCGTTTATTGAATTCAAGAACCAACGGAAACGTTCATCACAAGTCTCCGAAACTAGCTCTATTCGCAACAAACATCACAAATTCGGAGTTCGACAGAGCTAAATCCGCAGGATTTGCAGATACGGTAATAATGAAACCGTTAAGAGCAAGCATGATTGGGGCGTGTCTGCAACAAGTTCTCGAGCTGAGAAAAACAAGACAACAACATCCAGAAGGATCATCACCCGCAACTCTCAAGAGCTTGCTTACAGGGAAGAAGATTCTTGTGGTTGATGATAATATAGTTAACAGGAGAGTAGCTGCAGGAGCTCTCAAGAAATTTGGAGCAGAAGTGGTTTGTGCAGAGAGTGGTCAAGTTGCTTTGGGTTTGCTTCAGATTCCACACACTTTCGATGCTTGCTTCATGGATATTCAAATGCCACAGATGGACGGATTTGAAGCAACTCGTCAGATAAGAATGATGGAGAAGGAAACTAAAGAGAAGACAAATCTCGAATGGCATTTACCGATTCTAGCGATGACTGCGGATGTGATACACGCGACCTACGAGGAATGTCTGAAAAGTGGGATGGATGGTTACGTCTCCAAACCTTTTGAAGAAGAGAATCTCTATAAATCCGTTGCCAAATCATTCAAACCTAATCCTATCTCACCTTCGTCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000160 GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004673 GO:0004721 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0006464 GO:0006468 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006820 GO:0006950 GO:0006952 GO:0006970 GO:0007154 GO:0007165 GO:0007231 GO:0007275 GO:0008150 GO:0008152 GO:0008272 GO:0009267 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009743 GO:0009744 GO:0009755 GO:0009784 GO:0009790 GO:0009884 GO:0009885 GO:0009987 GO:0009991 GO:0010015 GO:0010029 GO:0010033 GO:0010035 GO:0010086 GO:0012505 GO:0015698 GO:0016020 GO:0016036 GO:0016301 GO:0016310 GO:0016311 GO:0016740 GO:0016772 GO:0016773 GO:0016775 GO:0016787 GO:0016788 GO:0016791 GO:0018106 GO:0018193 GO:0018202 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0022622 GO:0023052 GO:0031667 GO:0031668 GO:0031669 GO:0032501 GO:0032502 GO:0032870 GO:0033500 GO:0033554 GO:0034285 GO:0035556 GO:0036211 GO:0038023 GO:0042221 GO:0042578 GO:0042592 GO:0042594 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043424 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048364 GO:0048509 GO:0048580 GO:0048598 GO:0048731 GO:0048831 GO:0048856 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0065008 GO:0070887 GO:0071214 GO:0071310 GO:0071322 GO:0071324 GO:0071329 GO:0071368 GO:0071470 GO:0071495 GO:0071496 GO:0071704 GO:0071944 GO:0072348 GO:0098542 GO:0099402 GO:0104004 GO:0140096 GO:1900140 GO:1901564 GO:1901700 GO:1901701 GO:1905392 GO:2000026
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
CHASE HATPase_c HisKA Response_reg

Protein Analysis

1057

Amino Acids

117.95

Weight (kDa)

5.86

Isoelectric Point (pI)

46.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CHASE PF03924 178 - 359 1.7e-37 CHASE domain
HisKA PF00512 449 - 514 6.9e-20 His Kinase A (phospho-acceptor) domain
HATPase_c PF02518 656 - 733 1.7e-15 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Receiver_CRE1 PF24896 756 - 897 1.5e-48 AHK4/CRE1/WOL first receiver domain
Response_reg PF00072 924 - 1044 9.8e-22 Response regulator receiver domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 353, 668
Acc16I TGCGCA 1 cut(s) 2031
Acc36I ACCTGC 1 cut(s) 1158
Acc65I GGTACC 2 cut(s) 951, 1170
AccB1I GGYRCC 3 cut(s) 951, 1170, 1183
AccB7I CCANNNNNTGG 1 cut(s) 1397
AccBSI CCGCTC 3 cut(s) 649, 1472, 1881
AccI GTMKAC 1 cut(s) 891
AccII CGCG 3 cut(s) 1524, 1643, 3050
AclI AACGTT 1 cut(s) 2541
AclWI GGATC 5 cut(s) 341, 459, 792, 1055, 2734
AcuI CTGAAG 5 cut(s) 197, 1129, 1854, 2511, 2867
AfaI GTAC 6 cut(s) 560, 953, 1172, 1563, 1665, 2095
AfiI CCNNNNNNNGG 5 cut(s) 948, 1180, 1397, 1777, 2174
AgeI ACCGGT 1 cut(s) 697
AleI CACNNNNGTG 1 cut(s) 1211
Alw21I GWGCWC 4 cut(s) 127, 1206, 1641, 2821
AlwI GGATC 5 cut(s) 341, 459, 792, 1055, 2734
AlwNI CAGNNNCTG 3 cut(s) 944, 1334, 2405
Ama87I CYCGRG 1 cut(s) 2690
AoxI GGCC 2 cut(s) 2035, 2165
AsiGI ACCGGT 1 cut(s) 697
Asp700I GAANNNNTTC 1 cut(s) 2422
Asp718I GGTACC 2 cut(s) 951, 1170
AspLEI GCGC 2 cut(s) 1526, 2032
AsuHPI GGTGA 6 cut(s) 241, 687, 851, 1039, 2724, 3153
AvaI CYCGRG 1 cut(s) 2690
BaeGI GKGCMC 1 cut(s) 13
BaeI ACNNNNGTAYC 2 cut(s) 943, 976
BanI GGYRCC 3 cut(s) 951, 1170, 1183
BanII GRGCYC 2 cut(s) 1641, 2821
BauI CACGAG 1 cut(s) 1376
BbsI GAAGAC 3 cut(s) 891, 2007, 2999
Bbv12I GWGCWC 4 cut(s) 127, 1206, 1641, 2821
BccI CCATC 9 cut(s) 172, 370, 870, 1779, 1892, 2929, 2965, 3073, 3077
BceAI ACGGC 4 cut(s) 579, 2022, 2035, 2211
BcgI CGANNNNNNTGC 4 cut(s) 1621, 1655, 2052, 2086
BclI TGATCA 2 cut(s) 427, 538
BfmI CTRYAG 3 cut(s) 945, 2292, 2811
BfuAI ACCTGC 1 cut(s) 1158
BglII AGATCT 1 cut(s) 1103
BlpI GCTNAGC 1 cut(s) 2307
BmeT110I CYCGRG 1 cut(s) 2690
BmiI GGNNCC 3 cut(s) 953, 1172, 1185
BmrI ACTGGG 2 cut(s) 16, 119
BmsI GCATC 5 cut(s) 183, 373, 1064, 2293, 2893
BmuI ACTGGG 2 cut(s) 16, 119
BpiI GAAGAC 3 cut(s) 891, 2007, 2999
BpmI CTGGAG 1 cut(s) 1568
Bpu1102I GCTNAGC 1 cut(s) 2307
BpuEI CTTGAG 5 cut(s) 717, 773, 1458, 2729, 2807
Bsa29I ATCGAT 1 cut(s) 156
BsaBI GATNNNNATC 1 cut(s) 102
BsaI GGTCTC 3 cut(s) 577, 1131, 1939
BsaJI CCNNGG 1 cut(s) 955
BsaWI WCCGGW 2 cut(s) 697, 815
BsaXI ACNNNNNCTCC 2 cut(s) 2826, 2856
Bsc4I CCNNNNNNNGG 5 cut(s) 948, 1180, 1397, 1777, 2174
Bse118I RCCGGY 2 cut(s) 697, 2163
Bse1I ACTGG 3 cut(s) 11, 114, 2101
Bse3DI GCAATG 1 cut(s) 1981
Bse8I GATNNNNATC 1 cut(s) 102
BseCI ATCGAT 1 cut(s) 156
BseDI CCNNGG 1 cut(s) 955
BseGI GGATG 8 cut(s) 381, 385, 712, 1594, 2716, 3043, 3084, 3088
BseJI GATNNNNATC 1 cut(s) 102
BseLI CCNNNNNNNGG 5 cut(s) 948, 1180, 1397, 1777, 2174
BseMI GCAATG 1 cut(s) 1981
BseMII CTCAG 4 cut(s) 1602, 1929, 2517, 2687
BseNI ACTGG 3 cut(s) 11, 114, 2101
BseRI GAGGAG 5 cut(s) 699, 794, 1628, 1955, 2418
BseSI GKGCMC 1 cut(s) 13
BseYI CCCAGC 1 cut(s) 1911
BsgI GTGCAG 2 cut(s) 1284, 2871
Bsh1236I CGCG 3 cut(s) 1524, 1643, 3050
BshFI GGCC 2 cut(s) 2037, 2167
BshNI GGYRCC 3 cut(s) 951, 1170, 1183
BshTI ACCGGT 1 cut(s) 697
BshVI ATCGAT 1 cut(s) 156
BsiHKAI GWGCWC 4 cut(s) 127, 1206, 1641, 2821
BsiHKCI CYCGRG 1 cut(s) 2690
BsiSI CCGG 3 cut(s) 698, 816, 2164
BslI CCNNNNNNNGG 5 cut(s) 948, 1180, 1397, 1777, 2174
BsmBI CGTCTC 2 cut(s) 505, 3097
BsmI GAATGC 3 cut(s) 217, 1401, 1416
BsnI GGCC 2 cut(s) 2037, 2167
Bso31I GGTCTC 3 cut(s) 577, 1131, 1939
BsoBI CYCGRG 1 cut(s) 2690
Bsp1286I GDGCHC 5 cut(s) 13, 127, 1206, 1641, 2821
Bsp1720I GCTNAGC 1 cut(s) 2307
BspANI GGCC 2 cut(s) 2037, 2167
BspCNI CTCAG 4 cut(s) 1603, 1930, 2516, 2688
BspDI ATCGAT 1 cut(s) 156
BspFNI CGCG 3 cut(s) 1524, 1643, 3050
BspHI TCATGA 1 cut(s) 1114
BspLI GGNNCC 3 cut(s) 953, 1172, 1185
BspMAI CTGCAG 2 cut(s) 949, 2815
BspMI ACCTGC 1 cut(s) 1158
BspPI GGATC 5 cut(s) 341, 459, 792, 1055, 2734
BspQI GCTCTTC 2 cut(s) 33, 921
BspT107I GGYRCC 3 cut(s) 951, 1170, 1183
BspTNI GGTCTC 3 cut(s) 577, 1131, 1939
BsrBI CCGCTC 3 cut(s) 649, 1472, 1881
BsrDI GCAATG 1 cut(s) 1981
BsrFI RCCGGY 2 cut(s) 697, 2163
BsrI ACTGG 3 cut(s) 11, 114, 2101
BssAI RCCGGY 2 cut(s) 697, 2163
BssECI CCNNGG 1 cut(s) 955
BssSI CACGAG 1 cut(s) 1376
BssT1I CCWWGG 1 cut(s) 955
Bst2BI CACGAG 1 cut(s) 1376
Bst6I CTCTTC 5 cut(s) 33, 399, 909, 921, 3105
BstAPI GCANNNNNTGC 4 cut(s) 944, 1334, 2405, 2624
BstDEI CTNAG 8 cut(s) 593, 1439, 1611, 1938, 2307, 2461, 2503, 2696
BstEII GGTNACC 1 cut(s) 1013
BstF5I GGATG 8 cut(s) 381, 385, 712, 1594, 2716, 3043, 3084, 3088
BstFNI CGCG 3 cut(s) 1524, 1643, 3050
BstHHI GCGC 2 cut(s) 1526, 2032
BstNSI RCATGY 2 cut(s) 424, 1037
BstPI GGTNACC 1 cut(s) 1013
BstSFI CTRYAG 3 cut(s) 945, 2292, 2811
BstSLI GKGCMC 1 cut(s) 13
BstUI CGCG 3 cut(s) 1524, 1643, 3050
BstV2I GAAGAC 3 cut(s) 891, 2007, 2999
BstX2I RGATCY 2 cut(s) 1060, 1103
BstYI RGATCY 2 cut(s) 1060, 1103
Bsu15I ATCGAT 1 cut(s) 156
BsuRI GGCC 2 cut(s) 2037, 2167
BsuTUI ATCGAT 1 cut(s) 156
BtgZI GCGATG 1 cut(s) 3041
BtsCI GGATG 8 cut(s) 381, 385, 712, 1594, 2716, 3043, 3084, 3088
BtsI GCAGTG 3 cut(s) 364, 942, 2230
BtsIMutI CAGTG 5 cut(s) 228, 364, 377, 942, 2230
BveI ACCTGC 1 cut(s) 1158
CaiI CAGNNNCTG 3 cut(s) 944, 1334, 2405
CciI TCATGA 1 cut(s) 1114
CfoI GCGC 2 cut(s) 1526, 2032
Cfr10I RCCGGY 2 cut(s) 697, 2163
ClaI ATCGAT 1 cut(s) 156
Csp6I GTAC 6 cut(s) 559, 952, 1171, 1562, 1664, 2094
CspAI ACCGGT 1 cut(s) 697
CviQI GTAC 6 cut(s) 559, 952, 1171, 1562, 1664, 2094
DdeI CTNAG 8 cut(s) 593, 1439, 1611, 1938, 2307, 2461, 2503, 2696
DraI TTTAAA 1 cut(s) 2278
Eam1104I CTCTTC 5 cut(s) 33, 399, 909, 921, 3105
EarI CTCTTC 5 cut(s) 33, 399, 909, 921, 3105
Ecl136II GAGCTC 2 cut(s) 1639, 2819
Eco130I CCWWGG 1 cut(s) 955
Eco24I GRGCYC 2 cut(s) 1641, 2821
Eco31I GGTCTC 3 cut(s) 577, 1131, 1939
Eco32I GATATC 2 cut(s) 1045, 1573
Eco53kI GAGCTC 2 cut(s) 1639, 2819
Eco57I CTGAAG 5 cut(s) 197, 1129, 1854, 2511, 2867
Eco88I CYCGRG 1 cut(s) 2690
Eco91I GGTNACC 1 cut(s) 1013
EcoICRI GAGCTC 2 cut(s) 1639, 2819
EcoO65I GGTNACC 1 cut(s) 1013
EcoRI GAATTC 2 cut(s) 130, 2521
EcoRV GATATC 2 cut(s) 1045, 1573
EcoT14I CCWWGG 1 cut(s) 955
EcoT22I ATGCAT 2 cut(s) 1057, 1816
EcoT38I GRGCYC 2 cut(s) 1641, 2821
ErhI CCWWGG 1 cut(s) 955
Esp3I CGTCTC 2 cut(s) 505, 3097
FalI AAGNNNNNCTT 2 cut(s) 1758, 1790
FauI CCCGC 1 cut(s) 2743
FauNDI CATATG 2 cut(s) 2238, 2340
FbaI TGATCA 2 cut(s) 427, 538
FblI GTMKAC 1 cut(s) 891
FokI GGATG 8 cut(s) 388, 392, 719, 1601, 2703, 3050, 3091, 3095
FriOI GRGCYC 2 cut(s) 1641, 2821
FspI TGCGCA 1 cut(s) 2031
GlaI GCGC 2 cut(s) 1525, 2031
GsaI CCCAGC 1 cut(s) 1915
GsuI CTGGAG 1 cut(s) 1568
HaeIII GGCC 2 cut(s) 2037, 2167
HapII CCGG 3 cut(s) 698, 816, 2164
HhaI GCGC 2 cut(s) 1526, 2032
Hin6I GCGC 2 cut(s) 1524, 2030
HinP1I GCGC 2 cut(s) 1524, 2030
HincII GTYRAC 3 cut(s) 282, 879, 2797
HindII GTYRAC 3 cut(s) 282, 879, 2797
HindIII AAGCTT 2 cut(s) 318, 1488
HpaI GTTAAC 1 cut(s) 2797
HpaII CCGG 3 cut(s) 698, 816, 2164
HphI GGTGA 6 cut(s) 241, 687, 851, 1039, 2724, 3153
Hpy166II GTNNAC 6 cut(s) 282, 561, 879, 892, 2193, 2797
Hpy8I GTNNAC 6 cut(s) 282, 561, 879, 892, 2193, 2797
Hpy99I CGWCG 1 cut(s) 3172
HpyAV CCTTC 8 cut(s) 393, 537, 702, 1153, 2277, 2717, 2971, 3174
HpyCH4IV ACGT 3 cut(s) 2183, 2541, 3090
HpyF3I CTNAG 8 cut(s) 593, 1439, 1611, 1938, 2307, 2461, 2503, 2696
HpySE526I ACGT 3 cut(s) 2183, 2541, 3090
HspAI GCGC 2 cut(s) 1524, 2030
KpnI GGTACC 2 cut(s) 955, 1174
KroI GCCGGC 1 cut(s) 2163
KroNI GCCGGC 1 cut(s) 2165
Ksp22I TGATCA 2 cut(s) 427, 538
KspAI GTTAAC 1 cut(s) 2797
LguI GCTCTTC 2 cut(s) 33, 921
LmnI GCTCC 5 cut(s) 721, 1428, 1942, 2816, 2834
LweI GCATC 5 cut(s) 183, 373, 1064, 2293, 2893
MaeII ACGT 3 cut(s) 2183, 2541, 3090
MaeIII GTNAC 9 cut(s) 72, 309, 756, 1013, 1865, 1883, 2326, 2371, 3086
MbiI CCGCTC 3 cut(s) 649, 1472, 1881
MfeI CAATTG 2 cut(s) 534, 658
MflI RGATCY 2 cut(s) 1060, 1103
MhlI GDGCHC 5 cut(s) 13, 127, 1206, 1641, 2821
MlyI GAGTC 6 cut(s) 80, 764, 986, 1625, 2343, 2495
MmeI TCCRAC 5 cut(s) 831, 941, 1533, 1702, 1883
Mph1103I ATGCAT 2 cut(s) 1057, 1816
MroNI GCCGGC 1 cut(s) 2163
MroXI GAANNNNTTC 1 cut(s) 2422
MseI TTAA 8 cut(s) 471, 1317, 1734, 1764, 2232, 2277, 2651, 2796
MslI CAYNNNNRTG 3 cut(s) 480, 1038, 1211
MspA1I CMGCKG 2 cut(s) 2390, 2402
MspI CCGG 3 cut(s) 698, 816, 2164
MunI CAATTG 2 cut(s) 534, 658
Mva1269I GAATGC 3 cut(s) 217, 1401, 1416
MvnI CGCG 3 cut(s) 1524, 1643, 3050
NaeI GCCGGC 1 cut(s) 2165
NdeI CATATG 2 cut(s) 2238, 2340
NgoMIV GCCGGC 1 cut(s) 2163
NlaIV GGNNCC 3 cut(s) 953, 1172, 1185
NmeAIII GCCGAG 1 cut(s) 171
NmuCI GTSAC 4 cut(s) 72, 756, 2326, 2371
NsbI TGCGCA 1 cut(s) 2031
NsiI ATGCAT 2 cut(s) 1057, 1816
NspI RCATGY 2 cut(s) 424, 1037
OliI CACNNNNGTG 1 cut(s) 1211
PaeR7I CTCGAG 1 cut(s) 2690
PagI TCATGA 1 cut(s) 1114
PciSI GCTCTTC 2 cut(s) 33, 921
PcsI WCGNNNNNNNCGW 2 cut(s) 1647, 3054
PctI GAATGC 3 cut(s) 217, 1401, 1416
PdiI GCCGGC 1 cut(s) 2165
PdmI GAANNNNTTC 1 cut(s) 2422
PflMI CCANNNNNTGG 1 cut(s) 1397
PinAI ACCGGT 1 cut(s) 697
PleI GAGTC 6 cut(s) 79, 763, 985, 1624, 2343, 2495
PpsI GAGTC 6 cut(s) 79, 763, 985, 1624, 2343, 2495
PsiI TTATAA 2 cut(s) 353, 668
Psp124BI GAGCTC 2 cut(s) 1641, 2821
Psp1406I AACGTT 1 cut(s) 2541
PspEI GGTNACC 1 cut(s) 1013
PspFI CCCAGC 1 cut(s) 1911
PspN4I GGNNCC 3 cut(s) 953, 1172, 1185
PstI CTGCAG 2 cut(s) 949, 2815
PstNI CAGNNNCTG 3 cut(s) 944, 1334, 2405
PsuI RGATCY 2 cut(s) 1060, 1103
PvuII CAGCTG 1 cut(s) 2402
RsaI GTAC 6 cut(s) 560, 953, 1172, 1563, 1665, 2095
RsaNI GTAC 6 cut(s) 559, 952, 1171, 1562, 1664, 2094
RseI CAYNNNNRTG 3 cut(s) 480, 1038, 1211
SacI GAGCTC 2 cut(s) 1641, 2821
SapI GCTCTTC 2 cut(s) 33, 921
SaqAI TTAA 8 cut(s) 471, 1317, 1734, 1764, 2232, 2277, 2651, 2796
SchI GAGTC 6 cut(s) 80, 764, 986, 1625, 2343, 2495
SduI GDGCHC 5 cut(s) 13, 127, 1206, 1641, 2821
SfaNI GCATC 5 cut(s) 183, 373, 1064, 2293, 2893
SfcI CTRYAG 3 cut(s) 945, 2292, 2811
Sfr274I CTCGAG 1 cut(s) 2690
SlaI CTCGAG 1 cut(s) 2690
SmiMI CAYNNNNRTG 3 cut(s) 480, 1038, 1211
SmlI CTYRAG 6 cut(s) 732, 752, 1473, 2690, 2744, 2822
SmoI CTYRAG 6 cut(s) 732, 752, 1473, 2690, 2744, 2822
SspI AATATT 2 cut(s) 796, 1584
SstI GAGCTC 2 cut(s) 1641, 2821
StyI CCWWGG 1 cut(s) 955
TaiI ACGT 3 cut(s) 2186, 2544, 3093
TatI WGTACW 1 cut(s) 558
TauI GCSGC 1 cut(s) 652
Tru1I TTAA 8 cut(s) 471, 1317, 1734, 1764, 2232, 2277, 2651, 2796
Tru9I TTAA 8 cut(s) 471, 1317, 1734, 1764, 2232, 2277, 2651, 2796
TscAI CASTG 5 cut(s) 228, 364, 377, 949, 2230
TseFI GTSAC 4 cut(s) 72, 756, 2326, 2371
Tsp45I GTSAC 4 cut(s) 72, 756, 2326, 2371
TspGWI ACGGA 4 cut(s) 1565, 2550, 2955, 3118
TspRI CASTG 5 cut(s) 228, 364, 377, 949, 2230
Van91I CCANNNNNTGG 1 cut(s) 1397
XceI RCATGY 2 cut(s) 424, 1037
XhoI CTCGAG 1 cut(s) 2690
XmiI GTMKAC 1 cut(s) 891
XmnI GAANNNNTTC 1 cut(s) 2422
Zsp2I ATGCAT 2 cut(s) 1057, 1816
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.