FvH4_4g33130

Histidine kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0004318
Physical Location & Seq
Forward (+)
31454284 .. 31462250
7967 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g33130.t1

Sequence Viewer

Length: 3009 bp
ATGGGTGGGAATTTGAAGATGCAGAGCCACCACTCTGTGGCTGTGAGGTTGAATGAGCAAATGGGGGCCAAAAAGGGCTTCACTTTTATTCAGGCTTACAGAGCTTGGTTCCCAAAGCTTTTGATGCTTTGGATTCTGGTGATGGCTTATTTGAGCTTCTCAATCTACAATTACATGGATGCTGATAACAAAGTGAGAAGAGTTGAAGTGCTTAGTAGCATGTGTGATCAGAGAGCAAGAATGTTGCAAGATCAGTTCAATGTTAGTGTCAATCATGTGCATGCGCTTGCTATCCTTGTTTCCACATTTCATTACCTGAAGAATCCATCAGCAATTGATCAGGAAACTTTTGCAGAATACACTGCCAGAACTGCATTTGAGAGGCCTCTTTTAAGTGGGGTGGCCTATGCACAAAGAGTTGTTAATTCGGAGAGGGAAAGTTTTGAAAGGCAAAATGGCTGGACTATAAAGACGATGGAGAGGGAGCCCTCACCCATCCGAGATGAGTATGCACCTGTAATTTTCTCGCAGGAAACTGTCTCTTACATCGAGTCAATCGACATGATGTCTGGGGAGGAGGACAGAGAAAACATTTTAAGGGCTAGGGCTACTGGAAAAGCTGTTCTGACCAGTCCGTTCAGACTGCTGGGTTCACATCATCTTGGTGTTGTGTTGACTTTCCCTGTTTACAAATCCAAGCTCCCTCCAAACCCAACTGTGGAGGAGCGCATAAAGGCAGCTTCCGGGTACCTTGGTGGAGCATTTGATGTCGAGTCCCTTGTAGAGAACTTACTTGGGCAACTTGCTGGGAATCAGGCCATTATGGTTTATGTATATGATGTCACAAACTCTTCTGATCCCCTAATCATGTATGGTCACCAATATGAACAAGACGGTGACATGTCTCTTCTGCATGAAAGCAAGCTTGATTTTGGGGATCCCTTCAGAAAGCATCAGATGATATGTAGATATCATCACAGGGCACCAACGTCATGGACAGCAATCAATACTGCATTCTTATTCTTTGTGATTGGTTTGTTAGTTGGCTATATCTTATATGGAGCTGCGATGCACATTGTCAAAGTCGAGGATGATTTTCGTGAAATGGAAGAATTGAAAGTTCGAGCAGAAGCTGCTGATGTTGCCAAGTCCCAGTTTCTTGCTACTGTTTCCCATGAAATACGAACACCCATGAATGGAATCCTTGGAATGCTTGCCTTGCTTTTAGATACAGCTCTAAGTGGAACACAGAGGGATTATGCTCAAACTGCTCAGGCCTGTGGAAAGGCACTGATAGCATTAATAAATGAGGTGCTTGACAGGGCAAAAATCGAAGCTGGACGGTTGGAGCTGGAACAAGTTCCGTTTGGCATTCGATCTATACTAGATGATGTCCTTTCATTATTTTCTGAGAAGTCTAGAAATATGGGTTTAGAGCTTGCTGTATTTGTTTCTAATAAAGTTCCAGAAATTTTTATCGGTGATCCTGGGAGATTCAGACAGATCATTACAAATCTTGTGGGAAACTCTATTAAATTCACAGAACGAGGACATATATTTGTCAAAGTTCATCTAGCCGAGCCCTCAACGACCATGATTAATGGGAAACTGATGACTTGCTTGAACGGAGGATCAGATGAAGGTGTGCAAACATCTGATGGTTGTCAGTTTAAGACATTAAGTGGATGTGAAGCAGCTGATGATCAAAACAGTTGGGATACTTTTAAGCATTTAATTGCTAATGAAGAACACAGAACTGATGTTTCAAGTAATGTTGCTGCCAATAATGAGGCTTCTGAACAAGTCACTTTGATGGTCTCTGTGGAAGATACAGGGATTGGTATACCATTACGTGCCCAAGAACGAGTTTTTATGCCCTTCATGCAGGCAGACAGTTCAACCTCTAGACATTATGGAGGTACTGGTATCGGCTTGAGCATCAGCAAGTGTCTAGTTGAACTGATGGGTGGTCAGATAAACTTCAAAAGTCGACCTCATGTTGGGAGCACATTTTCGTTCACAGCTAATTTTGGGAGGTGCAAAGAAAATGCAGTTAGTGACTTGAAAAAACCTAAGTTGGAAGATCTACCTTCTCACTTTAGAGGATTGAGAGCAATACTAGTTGATGGAAAACTTGTGAGAGCTGCTGTAACAGAGTACCACTTGAAGAGACTTGGAATCTTGGTAGAAGTTGTAAGTAGCATCAAGATGGCTGTTGCTTTTTGTGGAAGAAATGGTTCTGCTACATCCGGAAATATTGTCCCCCCAGATATCATTCTAGTAGAAAAGGATGCATGGATTTCTGGTGAAGAATGTGATCTCAACAAACAGCATTTGGAATGGAAACAGAATGGGCACATATATAAGCTACCTAAGATGATGCTTATTGCAACCAATTTCGGTAAAGGTGAATTTGACAAGGCAAAGGCAGCAGGTTTTGCAGATACCGTGATTATGAAACCTTTGAGGGCTAGTATGGTAGCTGCATGTCTTCAACAGGTGCTTGGCATAGGTAAGAAGAGGCAACAGGGGAAGGAGCTGCCTAATGGATCTAATTTCCTTCAGAGCTTGCTCTCTGGTAAAAAAATCTTGGTCGTTGATGACAATATGGTAAACAGAAGGGTTGCTGCAGGTGCATTAAAGAAGTTCAGAGCTGATGTTGTGTGTGTTGACAGTGGCAAAGCAGCATTGAATTTGCTTCAAATACCACACAATTTTGATGCTTGTTTCATGGATATTCAAATGCCTGAAATGGACGGTTTTGAGGCAACTCGTAGAATTCGGCAGATGGAGAGCATGGCAAATGGTGAGATAAATGGTGGATTGGAAGGAGTTGCAAGAAATGGTGAGTGGCATGTGCCAGTATTAGCTATGACCGCTGATGTTATTCATGCCACTTATGATGAGTGCCGAAAATGCGGTATGGATGGATATGTCTCAAAGCCATTTGAGGAAGAGAATCTGTATCAAGCCGTGGCAAAGTTCTTCAAATCTAAACCAGACTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000160 GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004673 GO:0004721 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0006464 GO:0006468 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006820 GO:0006950 GO:0006952 GO:0006970 GO:0007154 GO:0007165 GO:0007231 GO:0007275 GO:0008150 GO:0008152 GO:0008272 GO:0009267 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009743 GO:0009744 GO:0009755 GO:0009784 GO:0009790 GO:0009884 GO:0009885 GO:0009987 GO:0009991 GO:0010015 GO:0010029 GO:0010033 GO:0010035 GO:0010086 GO:0012505 GO:0015698 GO:0016020 GO:0016036 GO:0016301 GO:0016310 GO:0016311 GO:0016740 GO:0016772 GO:0016773 GO:0016775 GO:0016787 GO:0016788 GO:0016791 GO:0018106 GO:0018193 GO:0018202 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0022622 GO:0023052 GO:0031667 GO:0031668 GO:0031669 GO:0032501 GO:0032502 GO:0032870 GO:0033500 GO:0033554 GO:0034285 GO:0035556 GO:0036211 GO:0038023 GO:0042221 GO:0042578 GO:0042592 GO:0042594 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043424 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048364 GO:0048509 GO:0048580 GO:0048598 GO:0048731 GO:0048831 GO:0048856 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051239 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0065007 GO:0065008 GO:0070887 GO:0071214 GO:0071310 GO:0071322 GO:0071324 GO:0071329 GO:0071368 GO:0071470 GO:0071495 GO:0071496 GO:0071704 GO:0071944 GO:0072348 GO:0098542 GO:0099402 GO:0104004 GO:0140096 GO:1900140 GO:1901564 GO:1901700 GO:1901701 GO:1905392 GO:2000026
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
CHASE HATPase_c HisKA Response_reg

Protein Analysis

1003

Amino Acids

111.31

Weight (kDa)

6.41

Isoelectric Point (pI)

37.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CHASE PF03924 111 - 291 4.7e-38 CHASE domain
HisKA PF00512 382 - 447 1e-19 His Kinase A (phospho-acceptor) domain
HATPase_c PF02518 594 - 675 1.9e-17 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Receiver_CRE1 PF24896 697 - 836 1.4e-53 AHK4/CRE1/WOL first receiver domain
Response_reg PF00072 863 - 931 2.3e-13 Response regulator receiver domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2621
Acc36I ACCTGC 2 cut(s) 2423, 2621
Acc65I GGTACC 1 cut(s) 747
AccB1I GGYRCC 2 cut(s) 747, 982
AccB7I CCANNNNNTGG 1 cut(s) 37
AccI GTMKAC 2 cut(s) 1843, 1990
AccIII TCCGGA 1 cut(s) 2249
AciI CCGC 2 cut(s) 2877, 2919
AclWI GGATC 6 cut(s) 851, 932, 945, 1478, 1639, 2557
AcsI RAATTY 6 cut(s) 10, 1470, 1535, 2411, 2692, 2778
AcuI CTGAAG 3 cut(s) 338, 928, 2546
AdeI CACNNNGTG 1 cut(s) 37
AfaI GTAC 3 cut(s) 749, 1921, 2159
AfiI CCNNNNNNNGG 4 cut(s) 37, 718, 1196, 2000
AflIII ACRYGT 1 cut(s) 900
AhdI GACNNNNNGTC 1 cut(s) 565
AhlI ACTAGT 1 cut(s) 2119
AjnI CCWGG 1 cut(s) 1486
AjuI GAANNNNNNNTTGG 2 cut(s) 62, 94
AloI GAACNNNNNNTCC 2 cut(s) 606, 638
Alw21I GWGCWC 1 cut(s) 2009
Alw26I GTCTC 5 cut(s) 544, 909, 1822, 2164, 2941
AlwI GGATC 6 cut(s) 851, 932, 945, 1478, 1639, 2557
AlwNI CAGNNNCTG 1 cut(s) 1133
Aor13HI TCCGGA 1 cut(s) 2249
AoxI GGCC 5 cut(s) 66, 383, 402, 816, 1275
ApoI RAATTY 6 cut(s) 10, 1470, 1535, 2411, 2692, 2778
AseI ATTAAT 2 cut(s) 1301, 1599
Asp700I GAANNNNTTC 2 cut(s) 1359, 2236
Asp718I GGTACC 1 cut(s) 747
AspLEI GCGC 2 cut(s) 286, 729
AspS9I GGNCC 1 cut(s) 66
AsuC2I CCSGG 1 cut(s) 745
AsuHPI GGTGA 9 cut(s) 151, 483, 869, 908, 1493, 2318, 2420, 2819, 2858
BaeGI GKGCMC 3 cut(s) 985, 1858, 2358
BaeI ACNNNNGTAYC 2 cut(s) 739, 772
BamHI GGATCC 1 cut(s) 937
BanI GGYRCC 2 cut(s) 747, 982
BanII GRGCYC 2 cut(s) 489, 1584
BbsI GAAGAC 1 cut(s) 2483
Bbv12I GWGCWC 1 cut(s) 2009
BceAI ACGGC 1 cut(s) 2957
BciT130I CCWGG 1 cut(s) 1488
BciVI GTATCC 1 cut(s) 1711
BclI TGATCA 3 cut(s) 226, 337, 1702
BcnI CCSGG 1 cut(s) 745
BcoDI GTCTC 5 cut(s) 544, 909, 1822, 2164, 2941
BcuI ACTAGT 1 cut(s) 2119
BfaI CTAG 9 cut(s) 603, 1385, 1419, 1574, 1905, 1952, 2120, 2279, 2472
BfmI CTRYAG 1 cut(s) 2628
BfuAI ACCTGC 2 cut(s) 2423, 2621
BfuI GTATCC 1 cut(s) 1711
BglII AGATCT 1 cut(s) 2083
Bme1390I CCNGG 2 cut(s) 745, 1488
BmeRI GACNNNNNGTC 1 cut(s) 565
BmgT120I GGNCC 1 cut(s) 66
BmiI GGNNCC 6 cut(s) 67, 110, 486, 749, 939, 984
BmrFI CCNGG 2 cut(s) 745, 1488
BmrI ACTGGG 1 cut(s) 1147
BmuI ACTGGG 1 cut(s) 1147
BpiI GAAGAC 1 cut(s) 2483
Bpu10I CCTNAGC 1 cut(s) 1272
BpuEI CTTGAG 1 cut(s) 1954
BpuMI CCSGG 1 cut(s) 745
BsaAI YACGTR 1 cut(s) 1853
BsaI GGTCTC 1 cut(s) 1822
BsaJI CCNNGG 4 cut(s) 751, 1204, 1487, 2973
BsaWI WCCGGW 1 cut(s) 2249
Bsc4I CCNNNNNNNGG 4 cut(s) 37, 718, 1196, 2000
Bse1I ACTGG 5 cut(s) 616, 630, 1153, 1927, 2861
BseAI TCCGGA 1 cut(s) 2249
BseBI CCWGG 1 cut(s) 1488
BseDI CCNNGG 4 cut(s) 751, 1204, 1487, 2973
BseGI GGATG 7 cut(s) 184, 495, 1096, 1691, 2246, 2296, 2932
BseLI CCNNNNNNNGG 4 cut(s) 37, 718, 1196, 2000
BseMII CTCAG 2 cut(s) 1286, 1401
BseNI ACTGG 5 cut(s) 616, 630, 1153, 1927, 2861
BseRI GAGGAG 2 cut(s) 590, 737
BseSI GKGCMC 3 cut(s) 985, 1858, 2358
BseYI CCCAGC 2 cut(s) 646, 806
BshFI GGCC 5 cut(s) 68, 385, 404, 818, 1277
BshNI GGYRCC 2 cut(s) 747, 982
BsiHKAI GWGCWC 1 cut(s) 2009
BsiSI CCGG 2 cut(s) 744, 2250
BslFI GGGAC 3 cut(s) 760, 1135, 2246
BslI CCNNNNNNNGG 4 cut(s) 37, 718, 1196, 2000
BsmAI GTCTC 5 cut(s) 544, 909, 1822, 2164, 2941
BsmFI GGGAC 3 cut(s) 760, 1135, 2246
BsmI GAATGC 3 cut(s) 1013, 1215, 1371
BsnI GGCC 5 cut(s) 68, 385, 404, 818, 1277
Bso31I GGTCTC 1 cut(s) 1822
Bsp1286I GDGCHC 6 cut(s) 489, 985, 1584, 1858, 2009, 2358
Bsp13I TCCGGA 1 cut(s) 2249
BspACI CCGC 2 cut(s) 2877, 2919
BspANI GGCC 5 cut(s) 68, 385, 404, 818, 1277
BspCNI CTCAG 2 cut(s) 1285, 1402
BspEI TCCGGA 1 cut(s) 2249
BspLI GGNNCC 6 cut(s) 67, 110, 486, 749, 939, 984
BspMAI CTGCAG 1 cut(s) 2632
BspMI ACCTGC 2 cut(s) 2423, 2621
BspPI GGATC 6 cut(s) 851, 932, 945, 1478, 1639, 2557
BspT107I GGYRCC 2 cut(s) 747, 982
BspTNI GGTCTC 1 cut(s) 1822
BsrI ACTGG 5 cut(s) 616, 630, 1153, 1927, 2861
BssECI CCNNGG 4 cut(s) 751, 1204, 1487, 2973
BssNAI GTATAC 1 cut(s) 1844
BssT1I CCWWGG 2 cut(s) 751, 1204
Bst1107I GTATAC 1 cut(s) 1844
Bst2UI CCWGG 1 cut(s) 1488
Bst6I CTCTTC 6 cut(s) 193, 856, 912, 2162, 2513, 2949
BstAPI GCANNNNNTGC 2 cut(s) 1133, 2438
BstBAI YACGTR 1 cut(s) 1853
BstC8I GCNNGC 7 cut(s) 282, 288, 923, 1215, 1440, 1887, 2570
BstDEI CTNAG 6 cut(s) 212, 1238, 1272, 1410, 2073, 2373
BstDSI CCRYGG 1 cut(s) 2973
BstEII GGTNACC 1 cut(s) 875
BstF5I GGATG 7 cut(s) 184, 495, 1096, 1691, 2246, 2296, 2932
BstHHI GCGC 2 cut(s) 286, 729
BstMAI GTCTC 5 cut(s) 544, 909, 1822, 2164, 2941
BstNI CCWGG 1 cut(s) 1488
BstNSI RCATGY 5 cut(s) 223, 284, 904, 2490, 2858
BstPI GGTNACC 1 cut(s) 875
BstSCI CCNGG 2 cut(s) 743, 1486
BstSFI CTRYAG 1 cut(s) 2628
BstSLI GKGCMC 3 cut(s) 985, 1858, 2358
BstV2I GAAGAC 1 cut(s) 2483
BstX2I RGATCY 3 cut(s) 937, 2083, 2549
BstXI CCANNNNNNTGG 1 cut(s) 993
BstYI RGATCY 3 cut(s) 937, 2083, 2549
BstZ17I GTATAC 1 cut(s) 1844
BsuI GTATCC 1 cut(s) 1711
BsuRI GGCC 5 cut(s) 68, 385, 404, 818, 1277
BtgI CCRYGG 1 cut(s) 2973
BtgZI GCGATG 1 cut(s) 1082
BtsCI GGATG 7 cut(s) 184, 495, 1096, 1691, 2246, 2296, 2932
BtsI GCAGTG 1 cut(s) 360
BtsIMutI CAGTG 3 cut(s) 360, 1289, 2680
BveI ACCTGC 2 cut(s) 2423, 2621
Cac8I GCNNGC 7 cut(s) 282, 288, 923, 1215, 1440, 1887, 2570
CaiI CAGNNNCTG 1 cut(s) 1133
CfoI GCGC 2 cut(s) 286, 729
Cfr13I GGNCC 1 cut(s) 66
Csp6I GTAC 3 cut(s) 748, 1920, 2158
CspCI CAANNNNNGTGG 2 cut(s) 1500, 1535
CviQI GTAC 3 cut(s) 748, 1920, 2158
DdeI CTNAG 6 cut(s) 212, 1238, 1272, 1410, 2073, 2373
DraIII CACNNNGTG 1 cut(s) 37
DriI GACNNNNNGTC 1 cut(s) 565
Eam1104I CTCTTC 6 cut(s) 193, 856, 912, 2162, 2513, 2949
Eam1105I GACNNNNNGTC 1 cut(s) 565
EarI CTCTTC 6 cut(s) 193, 856, 912, 2162, 2513, 2949
Eco130I CCWWGG 2 cut(s) 751, 1204
Eco147I AGGCCT 2 cut(s) 385, 1277
Eco24I GRGCYC 2 cut(s) 489, 1584
Eco31I GGTCTC 1 cut(s) 1822
Eco32I GATATC 2 cut(s) 971, 2272
Eco57I CTGAAG 3 cut(s) 338, 928, 2546
Eco91I GGTNACC 1 cut(s) 875
EcoO65I GGTNACC 1 cut(s) 875
EcoRI GAATTC 1 cut(s) 2778
EcoRII CCWGG 1 cut(s) 1486
EcoRV GATATC 2 cut(s) 971, 2272
EcoT14I CCWWGG 2 cut(s) 751, 1204
EcoT22I ATGCAT 1 cut(s) 2296
EcoT38I GRGCYC 2 cut(s) 489, 1584
ErhI CCWWGG 2 cut(s) 751, 1204
FaqI GGGAC 3 cut(s) 760, 1135, 2246
FbaI TGATCA 3 cut(s) 226, 337, 1702
FblI GTMKAC 2 cut(s) 1843, 1990
FokI GGATG 7 cut(s) 191, 482, 1103, 1698, 2233, 2303, 2939
FriOI GRGCYC 2 cut(s) 489, 1584
FspBI CTAG 9 cut(s) 603, 1385, 1419, 1574, 1905, 1952, 2120, 2279, 2472
GlaI GCGC 2 cut(s) 285, 728
GsaI CCCAGC 2 cut(s) 650, 810
HaeIII GGCC 5 cut(s) 68, 385, 404, 818, 1277
HapII CCGG 2 cut(s) 744, 2250
HhaI GCGC 2 cut(s) 286, 729
Hin6I GCGC 2 cut(s) 284, 727
HinP1I GCGC 2 cut(s) 284, 727
HincII GTYRAC 3 cut(s) 675, 1991, 2671
HindII GTYRAC 3 cut(s) 675, 1991, 2671
HindIII AAGCTT 2 cut(s) 116, 923
HpaII CCGG 2 cut(s) 744, 2250
HphI GGTGA 9 cut(s) 151, 483, 869, 908, 1493, 2318, 2420, 2819, 2858
Hpy166II GTNNAC 8 cut(s) 653, 675, 688, 1844, 1991, 2019, 2614, 2671
Hpy188III TCNNGA 7 cut(s) 341, 1100, 1419, 1466, 1905, 2206, 2250
Hpy8I GTNNAC 8 cut(s) 653, 675, 688, 1844, 1991, 2019, 2614, 2671
HpyAV CCTTC 8 cut(s) 952, 1634, 1888, 2100, 2527, 2570, 2613, 2822
HpyCH4IV ACGT 2 cut(s) 989, 1852
HpyF3I CTNAG 6 cut(s) 212, 1238, 1272, 1410, 2073, 2373
HpySE526I ACGT 2 cut(s) 989, 1852
HspAI GCGC 2 cut(s) 284, 727
Kpn2I TCCGGA 1 cut(s) 2249
KpnI GGTACC 1 cut(s) 751
Ksp22I TGATCA 3 cut(s) 226, 337, 1702
LmnI GCTCC 8 cut(s) 484, 705, 724, 758, 1061, 1348, 2004, 2536
MaeI CTAG 9 cut(s) 603, 1385, 1419, 1574, 1905, 1952, 2120, 2279, 2472
MaeII ACGT 2 cut(s) 989, 1852
MaeIII GTNAC 6 cut(s) 841, 875, 896, 1804, 2057, 2149
MfeI CAATTG 1 cut(s) 333
MflI RGATCY 3 cut(s) 937, 2083, 2549
MhlI GDGCHC 6 cut(s) 489, 985, 1584, 1858, 2009, 2358
MlyI GAGTC 3 cut(s) 560, 782, 2996
MmeI TCCRAC 2 cut(s) 1326, 2058
Mph1103I ATGCAT 1 cut(s) 2296
MroI TCCGGA 1 cut(s) 2249
MroXI GAANNNNTTC 2 cut(s) 1359, 2236
MslI CAYNNNNRTG 5 cut(s) 279, 663, 882, 1811, 2207
MspA1I CMGCKG 2 cut(s) 1697, 2879
MspI CCGG 2 cut(s) 744, 2250
MspR9I CCNGG 2 cut(s) 745, 1488
MunI CAATTG 1 cut(s) 333
Mva1269I GAATGC 3 cut(s) 1013, 1215, 1371
MvaI CCWGG 1 cut(s) 1488
NciI CCSGG 1 cut(s) 745
NlaIV GGNNCC 6 cut(s) 67, 110, 486, 749, 939, 984
NmeAIII GCCGAG 1 cut(s) 1603
NmuCI GTSAC 5 cut(s) 841, 875, 896, 1804, 2057
NsiI ATGCAT 1 cut(s) 2296
NspI RCATGY 5 cut(s) 223, 284, 904, 2490, 2858
PaeI GCATGC 1 cut(s) 284
PaqCI CACCTGC 1 cut(s) 2621
PceI AGGCCT 2 cut(s) 385, 1277
PciI ACATGT 1 cut(s) 900
PcsI WCGNNNNNNNCGW 1 cut(s) 555
PctI GAATGC 3 cut(s) 1013, 1215, 1371
PdmI GAANNNNTTC 2 cut(s) 1359, 2236
PfeI GAWTC 7 cut(s) 133, 322, 811, 1200, 1494, 2178, 2959
PflMI CCANNNNNTGG 1 cut(s) 37
PleI GAGTC 3 cut(s) 559, 781, 2996
PpsI GAGTC 3 cut(s) 559, 781, 2996
Ppu21I YACGTR 1 cut(s) 1853
PscI ACATGT 1 cut(s) 900
PshBI ATTAAT 2 cut(s) 1301, 1599
Psp6I CCWGG 1 cut(s) 1486
PspEI GGTNACC 1 cut(s) 875
PspFI CCCAGC 2 cut(s) 646, 806
PspGI CCWGG 1 cut(s) 1486
PspN4I GGNNCC 6 cut(s) 67, 110, 486, 749, 939, 984
PspPI GGNCC 1 cut(s) 66
PstI CTGCAG 1 cut(s) 2632
PstNI CAGNNNCTG 1 cut(s) 1133
PsuI RGATCY 3 cut(s) 937, 2083, 2549
PvuII CAGCTG 1 cut(s) 1697
RsaI GTAC 3 cut(s) 749, 1921, 2159
RsaNI GTAC 3 cut(s) 748, 1920, 2158
RseI CAYNNNNRTG 5 cut(s) 279, 663, 882, 1811, 2207
SalI GTCGAC 1 cut(s) 1989
Sau96I GGNCC 1 cut(s) 66
SchI GAGTC 3 cut(s) 560, 782, 2996
ScrFI CCNGG 2 cut(s) 745, 1488
SduI GDGCHC 6 cut(s) 489, 985, 1584, 1858, 2009, 2358
SfcI CTRYAG 1 cut(s) 2628
SmiMI CAYNNNNRTG 5 cut(s) 279, 663, 882, 1811, 2207
SmlI CTYRAG 1 cut(s) 1933
SmoI CTYRAG 1 cut(s) 1933
SpeI ACTAGT 1 cut(s) 2119
SphI GCATGC 1 cut(s) 284
SseBI AGGCCT 2 cut(s) 385, 1277
SsiI CCGC 2 cut(s) 2877, 2919
SspI AATATT 1 cut(s) 2257
SspMI CTAG 9 cut(s) 603, 1385, 1419, 1574, 1905, 1952, 2120, 2279, 2472
StuI AGGCCT 2 cut(s) 385, 1277
StyD4I CCNGG 2 cut(s) 743, 1486
StyI CCWWGG 2 cut(s) 751, 1204
TaiI ACGT 2 cut(s) 992, 1855
TaqI TCGA 8 cut(s) 549, 558, 771, 1086, 1123, 1332, 1375, 1990
TfiI GAWTC 7 cut(s) 133, 322, 811, 1200, 1494, 2178, 2959
TscAI CASTG 3 cut(s) 367, 1296, 2680
TseFI GTSAC 5 cut(s) 841, 875, 896, 1804, 2057
Tsp45I GTSAC 5 cut(s) 841, 875, 896, 1804, 2057
TspGWI ACGGA 3 cut(s) 624, 1353, 1641
TspRI CASTG 3 cut(s) 367, 1296, 2680
Van91I CCANNNNNTGG 1 cut(s) 37
VspI ATTAAT 2 cut(s) 1301, 1599
XapI RAATTY 6 cut(s) 10, 1470, 1535, 2411, 2692, 2778
XbaI TCTAGA 2 cut(s) 1418, 1904
XceI RCATGY 5 cut(s) 223, 284, 904, 2490, 2858
XmiI GTMKAC 2 cut(s) 1843, 1990
XmnI GAANNNNTTC 2 cut(s) 1359, 2236
XspI CTAG 9 cut(s) 603, 1385, 1419, 1574, 1905, 1952, 2120, 2279, 2472
Zsp2I ATGCAT 1 cut(s) 2296
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.