AT2G03380

Pentatricopeptide repeat domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0013363
Physical Location & Seq
Forward (+)
1028228 .. 1030361
2134 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G03380.1

Sequence Viewer

Length: 2070 bp
ATGCTACGCTCTATCACTCTTTCTCCGACTAGAAGATTCGGGTTTCCACCGAGATGCGTCTCTTTTACGACTATCAAAGAATTGATTTTGACTGAAGAGAATGATGGGTCTTCTCTGCATTACGCCGCTTCGAGCCCGTGCTTTCTCCTTCTAAGTAAGTGCACGAACATTGATTCTCTAAGGCAATCTCACGGAGTTTTAACGGGAAATGGACTCATGGGTGATATCTCGATTGCCACCAAGCTCGTTAGTCTATATGGTTTCTTTGGGTATACTAAAGATGCACGCTTGGTGTTCGATCAAATTCCTGAACCAGATTTTTATTTATGGAAAGTCATGCTCAGATGTTATTGCTTGAATAAAGAGAGTGTAGAAGTCGTAAAGTTGTATGATTTATTGATGAAGCATGGATTCAGATATGATGATATTGTTTTCTCGAAAGCTTTGAAAGCGTGTACTGAGCTTCAGGATTTAGACAATGGGAAGAAGATACATTGCCAGCTCGTTAAGGTGCCGAGTTTCGATAATGTTGTGTTGACAGGTCTTCTAGATATGTATGCTAAGTGTGGAGAAATCAAGAGTGCTCATAAGGTGTTTAACGATATTACTTTGAGGAATGTGGTTTGTTGGACTTCGATGATTGCTGGGTATGTTAAGAACGACTTGTGCGAAGAAGGGTTGGTTCTGTTTAATCGGATGAGGGAAAACAATGTTTTGGGTAATGAATATACTTACGGTACTCTAATAATGGCTTGTACAAAGCTTAGTGCTTTACATCAAGGAAAGTGGTTTCATGGTTGTTTGGTTAAGAGTGGTATAGAGCTCAGCTCATGTTTGGTGACATCTCTTCTCGATATGTATGTTAAGTGTGGTGACATAAGCAATGCACGTCGGGTGTTTAATGAGCATTCTCATGTGGATCTTGTCATGTGGACAGCTATGATTGTGGGGTATACCCATAACGGAAGTGTGAATGAGGCGCTGAGCTTGTTTCAGAAAATGAAGGGGGTTGAAATCAAGCCTAATTGTGTTACCATTGCAAGTGTCTTATCGGGTTGCGGTCTGATTGAGAATCTTGAACTGGGAAGATCAGTTCATGGCCTCTCCATCAAAGTTGGTATTTGGGATACAAATGTTGCAAATGCTCTGGTTCACATGTACGCCAAGTGTTACCAGAATAGAGATGCTAAATATGTGTTTGAAATGGAGTCAGAGAAAGATATAGTTGCTTGGAATTCTATAATTTCCGGGTTTTCACAAAACGGCTCTATCCATGAAGCTTTGTTTCTTTTCCATCGCATGAATTCAGAATCTGTGACGCCTAATGGTGTAACAGTTGCGAGTCTTTTTTCAGCCTGTGCTTCCCTTGGGTCTCTAGCTGTAGGTTCATCACTTCATGCCTATTCCGTGAAATTGGGTTTCCTGGCATCATCCAGTGTTCATGTTGGTACTGCACTCCTGGACTTCTATGCCAAATGTGGGGATCCCCAATCTGCCCGTCTCATCTTCGATACTATAGAGGAGAAAAACACAATCACATGGAGTGCTATGATCGGAGGCTATGGAAAGCAAGGGGATACAATAGGGTCCCTTGAGCTATTTGAGGAGATGCTGAAAAAGCAACAAAAACCCAACGAATCAACCTTCACATCTATTTTATCAGCTTGTGGCCACACAGGGATGGTTAATGAAGGGAAGAAGTACTTCAGCTCAATGTACAAAGATTATAACTTCACGCCTTCAACAAAACACTACACATGTATGGTTGATATGTTAGCTCGAGCAGGTGAGCTTGAGCAAGCCTTAGATATCATCGAAAAGATGCCAATCCAACCAGACGTGAGATGTTTCGGGGCATTTCTACACGGATGTGGAATGCATTCAAGATTTGATCTTGGGGAGATTGTGATTAAGAAGATGCTTGATTTACATCCTGATGATGCCTCTTATTATGTTCTCGTCTCTAATTTGTATGCATCGGATGGACGGTGGAATCAGGCTAAAGAAGTGAGAAATCTGATGAAGCAAAGAGGTCTGAGCAAGATTGCAGGCCATAGCACAATGGAATAG

Protein Analysis

689

Amino Acids

76.68

Weight (kDa)

6.88

Isoelectric Point (pI)

38.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 205 - 253 3.4e-11 PPR repeat family
PPR PF01535 208 - 238 2.1e-07 PPR repeat
PPR_2 PF13041 307 - 353 1.6e-09 PPR repeat family
PPR PF01535 309 - 336 8.7e-07 PPR repeat
PPR_2 PF13041 406 - 454 9.6e-11 PPR repeat family
PPR PF01535 409 - 437 2.7e-06 PPR repeat
PPR_2 PF13041 509 - 557 5.2e-11 PPR repeat family
PPR PF01535 512 - 540 9.8e-07 PPR repeat
E_motif PF20431 627 - 689 6.5e-14 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013363)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G03380
fragaria_vesca FvH4_4g30510
malus_domestica MD16G1065100.v1.1
prunus_persica Prupe.1G281800_v2.0.a1
pyrus_communis pycom13g05850 pycom16g05690
rosa_chinensis RchiOBHm_Chr4g0438881
rosa_laevigata RLG00000006322
rosa_multiflora Rmu_co8498131.1_g000001 Rmu_sc0002505.1_g000022
rosa_roxburghii Rroxscaffold_5G00379900
rosa_rugosa Rorug04G0314000
rosa_samantha Rh4AG364800 Rh4BG375900 Rh4CG390000 Rh4DG370600
rosa_wichuraiana Rw0G007290 Rw0G016840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1728
AarI CACCTGC 1 cut(s) 1775
Acc36I ACCTGC 1 cut(s) 1775
AccB1I GGYRCC 1 cut(s) 511
AccI GTMKAC 2 cut(s) 272, 953
AciI CCGC 2 cut(s) 126, 1059
AclWI GGATC 3 cut(s) 927, 1478, 1491
AcoI YGGCCR 1 cut(s) 1669
AcsI RAATTY 3 cut(s) 303, 1234, 1303
AcuI CTGAAG 3 cut(s) 114, 449, 1690
AcyI GRCGYC 1 cut(s) 1319
AfaI GTAC 7 cut(s) 457, 739, 757, 1160, 1450, 1703, 1718
AfiI CCNNNNNNNGG 1 cut(s) 1479
AflIII ACRYGT 2 cut(s) 1155, 1757
AgsI TTSAA 7 cut(s) 358, 448, 1013, 1079, 1202, 1743, 1884
AjiI CACGTC 2 cut(s) 890, 1840
AjnI CCWGG 2 cut(s) 1422, 1458
AleI CACNNNNGTG 1 cut(s) 1869
AloI GAACNNNNNNTCC 2 cut(s) 1077, 1109
Alw21I GWGCWC 3 cut(s) 164, 586, 825
Alw26I GTCTC 4 cut(s) 64, 1377, 1505, 1966
Alw44I GTGCAC 1 cut(s) 160
AlwI GGATC 3 cut(s) 927, 1478, 1491
AlwNI CAGNNNCTG 1 cut(s) 1313
Ama87I CYCGRG 1 cut(s) 1779
AoxI GGCC 3 cut(s) 1099, 1669, 2050
ApaLI GTGCAC 1 cut(s) 160
ApoI RAATTY 3 cut(s) 303, 1234, 1303
Asp700I GAANNNNTTC 2 cut(s) 1703, 1879
AspLEI GCGC 1 cut(s) 982
AspS9I GGNCC 1 cut(s) 1587
AsuC2I CCSGG 1 cut(s) 1249
AsuHPI GGTGA 4 cut(s) 233, 850, 884, 1799
AvaI CYCGRG 1 cut(s) 1779
AvaII GGWCC 1 cut(s) 1587
BaeGI GKGCMC 1 cut(s) 164
BaeI ACNNNNGTAYC 2 cut(s) 1119, 1152
BalI TGGCCA 1 cut(s) 1671
BamHI GGATCC 1 cut(s) 1483
BanI GGYRCC 1 cut(s) 511
BanII GRGCYC 2 cut(s) 137, 825
BbsI GAAGAC 2 cut(s) 102, 536
Bbv12I GWGCWC 3 cut(s) 164, 586, 825
BccI CCATC 5 cut(s) 98, 1115, 1302, 1675, 1976
BceAI ACGGC 1 cut(s) 1279
BciT130I CCWGG 2 cut(s) 1424, 1460
BciVI GTATCC 2 cut(s) 1120, 1570
BcnI CCSGG 1 cut(s) 1249
BcoDI GTCTC 4 cut(s) 64, 1377, 1505, 1966
BfaI CTAG 3 cut(s) 30, 548, 1376
BfmI CTRYAG 2 cut(s) 1380, 1515
BfoI RGCGCY 1 cut(s) 983
BfuAI ACCTGC 1 cut(s) 1775
BfuI GTATCC 2 cut(s) 1120, 1570
BisI GCNGC 1 cut(s) 126
BlpI GCTNAGC 2 cut(s) 824, 983
BlsI GCNGC 1 cut(s) 127
BmcAI AGTACT 1 cut(s) 1703
Bme1390I CCNGG 3 cut(s) 1249, 1424, 1460
Bme18I GGWCC 1 cut(s) 1587
BmeT110I CYCGRG 1 cut(s) 1779
BmgBI CACGTC 2 cut(s) 890, 1840
BmgT120I GGNCC 1 cut(s) 1587
BmiI GGNNCC 4 cut(s) 513, 1485, 1588, 1589
BmrFI CCNGG 3 cut(s) 1249, 1424, 1460
BmrI ACTGGG 1 cut(s) 1091
BmsI GCATC 9 cut(s) 44, 271, 1174, 1436, 1599, 1812, 1908, 1930, 1985
BmuI ACTGGG 1 cut(s) 1091
BpiI GAAGAC 2 cut(s) 102, 536
BplI GAGNNNNNCTC 2 cut(s) 812, 844
Bpu1102I GCTNAGC 2 cut(s) 824, 983
BpuEI CTTGAG 2 cut(s) 1613, 1814
BpuMI CCSGG 1 cut(s) 1249
BsaBI GATNNNNATC 2 cut(s) 1826, 1929
BsaHI GRCGYC 1 cut(s) 1319
BsaI GGTCTC 1 cut(s) 1377
BsaJI CCNNGG 1 cut(s) 1366
BsaXI ACNNNNNCTCC 2 cut(s) 7, 37
Bsc4I CCNNNNNNNGG 1 cut(s) 1479
Bse1I ACTGG 2 cut(s) 1086, 1434
Bse3DI GCAATG 3 cut(s) 493, 889, 1035
Bse8I GATNNNNATC 2 cut(s) 1826, 1929
BseBI CCWGG 2 cut(s) 1424, 1460
BseDI CCNNGG 1 cut(s) 1366
BseGI GGATG 6 cut(s) 702, 1430, 1686, 1874, 1930, 1987
BseJI GATNNNNATC 2 cut(s) 1826, 1929
BseLI CCNNNNNNNGG 1 cut(s) 1479
BseMI GCAATG 3 cut(s) 493, 889, 1035
BseMII CTCAG 5 cut(s) 355, 450, 838, 974, 2027
BseNI ACTGG 2 cut(s) 1086, 1434
BseRI GAGGAG 2 cut(s) 1535, 1619
BseSI GKGCMC 1 cut(s) 164
BseYI CCCAGC 1 cut(s) 644
BsgI GTGCAG 1 cut(s) 1437
BshFI GGCC 3 cut(s) 1101, 1671, 2052
BshNI GGYRCC 1 cut(s) 511
BsiHKAI GWGCWC 3 cut(s) 164, 586, 825
BsiHKCI CYCGRG 1 cut(s) 1779
BsiSI CCGG 1 cut(s) 1248
BslFI GGGAC 1 cut(s) 1573
BslI CCNNNNNNNGG 1 cut(s) 1479
BsmAI GTCTC 4 cut(s) 64, 1377, 1505, 1966
BsmBI CGTCTC 3 cut(s) 64, 1505, 1966
BsmFI GGGAC 1 cut(s) 1573
BsmI GAATGC 3 cut(s) 907, 1879, 1881
BsnI GGCC 3 cut(s) 1101, 1671, 2052
Bso31I GGTCTC 1 cut(s) 1377
BsoBI CYCGRG 1 cut(s) 1779
Bsp1286I GDGCHC 4 cut(s) 137, 164, 586, 825
Bsp1407I TGTACA 2 cut(s) 755, 1716
Bsp143I GATC 6 cut(s) 298, 919, 1088, 1483, 1551, 1891
Bsp1720I GCTNAGC 2 cut(s) 824, 983
BspACI CCGC 2 cut(s) 126, 1059
BspANI GGCC 3 cut(s) 1101, 1671, 2052
BspCNI CTCAG 5 cut(s) 354, 451, 837, 975, 2028
BspLI GGNNCC 4 cut(s) 513, 1485, 1588, 1589
BspMI ACCTGC 1 cut(s) 1775
BspPI GGATC 3 cut(s) 927, 1478, 1491
BspT107I GGYRCC 1 cut(s) 511
BspTNI GGTCTC 1 cut(s) 1377
BsrDI GCAATG 3 cut(s) 493, 889, 1035
BsrGI TGTACA 2 cut(s) 755, 1716
BsrI ACTGG 2 cut(s) 1086, 1434
BssECI CCNNGG 1 cut(s) 1366
BssMI GATC 6 cut(s) 298, 919, 1088, 1483, 1551, 1891
BssNAI GTATAC 2 cut(s) 273, 954
BssNI GRCGYC 1 cut(s) 1319
BssT1I CCWWGG 1 cut(s) 1366
Bst1107I GTATAC 2 cut(s) 273, 954
Bst2UI CCWGG 2 cut(s) 1424, 1460
Bst4CI ACNGT 3 cut(s) 737, 1336, 1989
Bst6I CTCTTC 2 cut(s) 90, 852
BstACI GRCGYC 1 cut(s) 1319
BstAUI TGTACA 2 cut(s) 755, 1716
BstC8I GCNNGC 4 cut(s) 286, 500, 1800, 2050
BstF5I GGATG 6 cut(s) 702, 1430, 1686, 1874, 1930, 1987
BstH2I RGCGCY 1 cut(s) 983
BstHHI GCGC 1 cut(s) 982
BstKTI GATC 6 cut(s) 301, 922, 1091, 1486, 1554, 1894
BstMAI GTCTC 4 cut(s) 64, 1377, 1505, 1966
BstMBI GATC 6 cut(s) 298, 919, 1088, 1483, 1551, 1891
BstMWI GCNNNNNNNGC 2 cut(s) 449, 1618
BstNI CCWGG 2 cut(s) 1424, 1460
BstNSI RCATGY 2 cut(s) 1159, 1761
BstSCI CCNGG 3 cut(s) 1247, 1422, 1458
BstSFI CTRYAG 2 cut(s) 1380, 1515
BstSLI GKGCMC 1 cut(s) 164
BstV2I GAAGAC 2 cut(s) 102, 536
BstX2I RGATCY 2 cut(s) 919, 1483
BstYI RGATCY 2 cut(s) 919, 1483
BstZ17I GTATAC 2 cut(s) 273, 954
BsuI GTATCC 2 cut(s) 1120, 1570
BsuRI GGCC 3 cut(s) 1101, 1671, 2052
BtgZI GCGATG 1 cut(s) 1280
BtrI CACGTC 2 cut(s) 890, 1840
BtsCI GGATG 6 cut(s) 702, 1430, 1686, 1874, 1930, 1987
BtsIMutI CAGTG 1 cut(s) 1441
BveI ACCTGC 1 cut(s) 1775
Cac8I GCNNGC 4 cut(s) 286, 500, 1800, 2050
CaiI CAGNNNCTG 1 cut(s) 1313
CfoI GCGC 1 cut(s) 982
Cfr13I GGNCC 1 cut(s) 1587
CseI GACGC 2 cut(s) 46, 1327
Csp6I GTAC 7 cut(s) 456, 738, 756, 1159, 1449, 1702, 1717
CspCI CAANNNNNGTGG 2 cut(s) 767, 802
CviQI GTAC 7 cut(s) 456, 738, 756, 1159, 1449, 1702, 1717
DpnI GATC 6 cut(s) 300, 921, 1090, 1485, 1553, 1893
DpnII GATC 6 cut(s) 298, 919, 1088, 1483, 1551, 1891
EaeI YGGCCR 1 cut(s) 1669
Eam1104I CTCTTC 2 cut(s) 90, 852
EarI CTCTTC 2 cut(s) 90, 852
Ecl136II GAGCTC 1 cut(s) 823
Eco130I CCWWGG 1 cut(s) 1366
Eco24I GRGCYC 2 cut(s) 137, 825
Eco31I GGTCTC 1 cut(s) 1377
Eco32I GATATC 2 cut(s) 226, 1810
Eco47I GGWCC 1 cut(s) 1587
Eco53kI GAGCTC 1 cut(s) 823
Eco57I CTGAAG 3 cut(s) 114, 449, 1690
Eco88I CYCGRG 1 cut(s) 1779
EcoICRI GAGCTC 1 cut(s) 823
EcoO109I RGGNCCY 1 cut(s) 1587
EcoRI GAATTC 2 cut(s) 1234, 1303
EcoRII CCWGG 2 cut(s) 1422, 1458
EcoRV GATATC 2 cut(s) 226, 1810
EcoT14I CCWWGG 1 cut(s) 1366
EcoT22I ATGCAT 2 cut(s) 1881, 1978
EcoT38I GRGCYC 2 cut(s) 137, 825
ErhI CCWWGG 1 cut(s) 1366
Esp3I CGTCTC 3 cut(s) 64, 1505, 1966
FalI AAGNNNNNCTT 4 cut(s) 647, 679, 1688, 1720
FaqI GGGAC 1 cut(s) 1573
FblI GTMKAC 2 cut(s) 272, 953
Fnu4HI GCNGC 1 cut(s) 126
FokI GGATG 6 cut(s) 709, 1417, 1693, 1881, 1917, 1994
FriOI GRGCYC 2 cut(s) 137, 825
Fsp4HI GCNGC 1 cut(s) 126
FspBI CTAG 3 cut(s) 30, 548, 1376
GlaI GCGC 1 cut(s) 981
GluI GCNGC 1 cut(s) 126
GsaI CCCAGC 1 cut(s) 648
HaeII RGCGCY 1 cut(s) 983
HaeIII GGCC 3 cut(s) 1101, 1671, 2052
HapII CCGG 1 cut(s) 1248
HgaI GACGC 2 cut(s) 46, 1327
HhaI GCGC 1 cut(s) 982
Hin1I GRCGYC 1 cut(s) 1319
Hin6I GCGC 1 cut(s) 980
HinP1I GCGC 1 cut(s) 980
HincII GTYRAC 1 cut(s) 537
HindII GTYRAC 1 cut(s) 537
HindIII AAGCTT 3 cut(s) 441, 761, 1278
HpaII CCGG 1 cut(s) 1248
HphI GGTGA 4 cut(s) 233, 850, 884, 1799
Hpy166II GTNNAC 7 cut(s) 162, 273, 456, 537, 933, 954, 1153
Hpy8I GTNNAC 7 cut(s) 162, 273, 456, 537, 933, 954, 1153
Hpy99I CGWCG 1 cut(s) 894
HpyAV CCTTC 6 cut(s) 158, 668, 997, 1654, 1685, 1749
HpyCH4III ACNGT 3 cut(s) 737, 1336, 1989
HpyCH4IV ACGT 2 cut(s) 889, 1839
HpyF10VI GCNNNNNNNGC 2 cut(s) 449, 1618
HpySE526I ACGT 2 cut(s) 889, 1839
Hsp92I GRCGYC 1 cut(s) 1319
HspAI GCGC 1 cut(s) 980
KflI GGGWCCC 1 cut(s) 1587
Kzo9I GATC 6 cut(s) 298, 919, 1088, 1483, 1551, 1891
LweI GCATC 9 cut(s) 44, 271, 1174, 1436, 1599, 1812, 1908, 1930, 1985
MaeI CTAG 3 cut(s) 30, 548, 1376
MaeII ACGT 2 cut(s) 889, 1839
MaeIII GTNAC 6 cut(s) 838, 872, 1030, 1169, 1315, 1330
MalI GATC 6 cut(s) 300, 921, 1090, 1485, 1553, 1893
MboI GATC 6 cut(s) 298, 919, 1088, 1483, 1551, 1891
MflI RGATCY 2 cut(s) 919, 1483
MhlI GDGCHC 4 cut(s) 137, 164, 586, 825
MlsI TGGCCA 1 cut(s) 1671
MluCI AATT 8 cut(s) 80, 303, 1024, 1234, 1242, 1303, 1412, 1966
MluNI TGGCCA 1 cut(s) 1671
MlyI GAGTC 3 cut(s) 207, 1217, 1351
MmeI TCCRAC 3 cut(s) 50, 608, 1855
MnlI CCTC 9 cut(s) 606, 693, 970, 1112, 1513, 1550, 1597, 1954, 2024
Mox20I TGGCCA 1 cut(s) 1671
Mph1103I ATGCAT 2 cut(s) 1881, 1978
MroXI GAANNNNTTC 2 cut(s) 1703, 1879
MscI TGGCCA 1 cut(s) 1671
MslI CAYNNNNRTG 6 cut(s) 52, 912, 1679, 1760, 1869, 1935
Msp20I TGGCCA 1 cut(s) 1671
MspI CCGG 1 cut(s) 1248
MspR9I CCNGG 3 cut(s) 1249, 1424, 1460
Mva1269I GAATGC 3 cut(s) 907, 1879, 1881
MvaI CCWGG 2 cut(s) 1424, 1460
MwoI GCNNNNNNNGC 2 cut(s) 449, 1618
NciI CCSGG 1 cut(s) 1249
NdeII GATC 6 cut(s) 298, 919, 1088, 1483, 1551, 1891
NlaIV GGNNCC 4 cut(s) 513, 1485, 1588, 1589
NmeAIII GCCGAG 1 cut(s) 540
NmuCI GTSAC 3 cut(s) 838, 872, 1315
NsiI ATGCAT 2 cut(s) 1881, 1978
NspI RCATGY 2 cut(s) 1159, 1761
OliI CACNNNNGTG 1 cut(s) 1869
PaeR7I CTCGAG 1 cut(s) 1779
PaqCI CACCTGC 1 cut(s) 1775
PciI ACATGT 2 cut(s) 1155, 1757
PcsI WCGNNNNNNNCGW 1 cut(s) 666
PctI GAATGC 3 cut(s) 907, 1879, 1881
PdmI GAANNNNTTC 2 cut(s) 1703, 1879
PfeI GAWTC 7 cut(s) 36, 173, 411, 1072, 1310, 1637, 1993
PfoI TCCNGGA 1 cut(s) 1458
PkrI GCNGC 1 cut(s) 127
PleI GAGTC 3 cut(s) 207, 1216, 1350
PpsI GAGTC 3 cut(s) 207, 1216, 1350
PpuMI RGGWCCY 1 cut(s) 1587
PscI ACATGT 2 cut(s) 1155, 1757
PsiI TTATAA 1 cut(s) 1728
Psp124BI GAGCTC 1 cut(s) 825
Psp5II RGGWCCY 1 cut(s) 1587
Psp6I CCWGG 2 cut(s) 1422, 1458
PspFI CCCAGC 1 cut(s) 644
PspGI CCWGG 2 cut(s) 1422, 1458
PspN4I GGNNCC 4 cut(s) 513, 1485, 1588, 1589
PspPI GGNCC 1 cut(s) 1587
PspPPI RGGWCCY 1 cut(s) 1587
PspXI VCTCGAGB 1 cut(s) 1779
PstNI CAGNNNCTG 1 cut(s) 1313
PsuI RGATCY 2 cut(s) 919, 1483
RsaI GTAC 7 cut(s) 457, 739, 757, 1160, 1450, 1703, 1718
RsaNI GTAC 7 cut(s) 456, 738, 756, 1159, 1449, 1702, 1717
RseI CAYNNNNRTG 6 cut(s) 52, 912, 1679, 1760, 1869, 1935
SacI GAGCTC 1 cut(s) 825
SatI GCNGC 1 cut(s) 126
Sau3AI GATC 6 cut(s) 298, 919, 1088, 1483, 1551, 1891
Sau96I GGNCC 1 cut(s) 1587
ScaI AGTACT 1 cut(s) 1703
SchI GAGTC 3 cut(s) 207, 1217, 1351
ScrFI CCNGG 3 cut(s) 1249, 1424, 1460
SduI GDGCHC 4 cut(s) 137, 164, 586, 825
SfaNI GCATC 9 cut(s) 44, 271, 1174, 1436, 1599, 1812, 1908, 1930, 1985
SfcI CTRYAG 2 cut(s) 1380, 1515
Sfr274I CTCGAG 1 cut(s) 1779
SinI GGWCC 1 cut(s) 1587
SlaI CTCGAG 1 cut(s) 1779
SmiMI CAYNNNNRTG 6 cut(s) 52, 912, 1679, 1760, 1869, 1935
SmlI CTYRAG 3 cut(s) 1592, 1779, 1793
SmoI CTYRAG 3 cut(s) 1592, 1779, 1793
Sse9I AATT 8 cut(s) 80, 303, 1024, 1234, 1242, 1303, 1412, 1966
SsiI CCGC 2 cut(s) 126, 1059
SspMI CTAG 3 cut(s) 30, 548, 1376
SstI GAGCTC 1 cut(s) 825
StyD4I CCNGG 3 cut(s) 1247, 1422, 1458
StyI CCWWGG 1 cut(s) 1366
TaaI ACNGT 3 cut(s) 737, 1336, 1989
TaiI ACGT 2 cut(s) 892, 1842
TasI AATT 8 cut(s) 80, 303, 1024, 1234, 1242, 1303, 1412, 1966
TatI WGTACW 4 cut(s) 455, 755, 1701, 1716
TauI GCSGC 1 cut(s) 128
TfiI GAWTC 7 cut(s) 36, 173, 411, 1072, 1310, 1637, 1993
TscAI CASTG 1 cut(s) 1441
TseFI GTSAC 3 cut(s) 838, 872, 1315
Tsp45I GTSAC 3 cut(s) 838, 872, 1315
TspGWI ACGGA 4 cut(s) 207, 978, 1396, 1881
TspRI CASTG 1 cut(s) 1441
VneI GTGCAC 1 cut(s) 160
VpaK11BI GGWCC 1 cut(s) 1587
XapI RAATTY 3 cut(s) 303, 1234, 1303
XbaI TCTAGA 1 cut(s) 547
XceI RCATGY 2 cut(s) 1159, 1761
XhoI CTCGAG 1 cut(s) 1779
XmiI GTMKAC 2 cut(s) 272, 953
XmnI GAANNNNTTC 2 cut(s) 1703, 1879
XspI CTAG 3 cut(s) 30, 548, 1376
ZrmI AGTACT 1 cut(s) 1703
Zsp2I ATGCAT 2 cut(s) 1881, 1978
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.