Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002505.1

Orthogroup ID

OG0013363

Physical Location & Seq

Genomic Coordinates Reverse (-)

83245 .. 86011

Gene Structure 2767 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002505.1_g000022.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2286 bp

atgaagctcatctctaacctacacaaacaaatacccagaaaccctttacttcaattacgaactctaacccatttcatctataacccaccacctccagacccacctcagctttctcaagccaaagcctcaacccagtcagtcttttcaaacccagccttcaatcttctcatcatgtgtagaaacatcgattcccttaggaaagttcatagcttgcttgtagtgcatggcttgtcgaacgatcttgtttgtcacaccaaattgataagcctatacgcgtcatttgggcacgtcaattgtgcccggttggtgttcgacgaaatgccaagcccggatttttactcgtcgaaagtgatgctgaggtggtacttcatgcacaatgtgtatgaggaggttgtggggttgtttaggcggatgagaatgtgggtaagagagcgtgacaatgttgtgtattcgattgtgttgaaggcttgtagtgaggtgagggatgtgaatgaagggaggaaggtgcattgtgagattgttaaggcggggagccccgatgggtttgtgttgactgggttggtggatgtgtatgcaaagtgtgggtggattgagtggtcccgtggggtgtttgatggcattgtggagaggagtgtggtttgttggacttcgatgattgttgggtatgtgcagaatgagtgtccggaagatgggttggttttgtttaataggatgagagaggagatcggtgaagggaaccagtttacgctaggtagtgtgcttacagcttgcacaaagttgagagctctgcaccagggaaagtgggttcatggatacttgattaagaatggtattgaggttaattctgtgttggtgacgtctcttttggacatgtatgtcaagtgtggggacatcagagatgctcgttacatatttgatgagcattccatgattgatcttgtttcgtggactgcaatgattgttgggtacacgcaaagcgggtgcccgttggaggctctgaagttgtttacagataagagatgggttggtctgttgcccaattctataaccactgcaagtgtgctttcgtcttgtgcacaatcaggtcatttgcatttgggaaggtcagtccatggtcttgggattaaacttgggttggaaaattctactgtgagaaatgctcttgttgatatgtacgcaaaatgccatatgattagtgatgctcgatatatctttgatacaacattggacaagaatgtgattacttggagttcaattatttgtgggtgttcccaaaacgggtctgcatttgaagccctccaactctttcatcaaatgagatcagagtcattctcacctgatgcattcacattggtaagtgtcctctcagcttgtgcttccctcggttttcttcaggttggttcatcacttcatgcttactcgataaaggatggcatattaacttcaaacctgtatgctggcactgcacttctaaatttctatgccaagtgtggggatgctgaatctgctcgtctagtttttgatggaatgaaagagaagaacactataacgtggagtgcgatgattggtggttatggaatccagggtgacagtagaggttccgtagaacttttcagtgatatgttaaagaagcgtctagagccaaacgaagtaatcttcacaaccttattatcagcttgtagccatacaggaatggttgcagaaggtctgaagtatttcaattctctatgccgggattataactttgtgccttctatgaagcactatgcatgtatggttgatctcttggctcgtgctggcaaacttgaagaagccttggaatttattgagaaaatgccggttcgaccagatgttaatttgtttggggcatttctccacggatgtggactctattcaaggtttgatcttggcgaagtggcgataagaagattgctagagttgcatccttatgaagcttgctattatgtgctaatgtgtaatctttatgcttcagacggtagatggagccaggttaatcaggttgagtcaacggaaactgcccttgagtgcgtcccaaatctccacctgagaatcacattcaatttgccagacatcaaccccagcatccaacttgtagtcatgacagatgagaacaaagcagaggctgcacacctcagtcgatggcagggatttaccgacttcccatcagtgcctgcaacaattgtccagccaccgaaagggaatttggtgcggcttttggataaacaagcagccacaaaactcggtgaatctcaattttctgagtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

761

Amino Acids

85.12

Weight (kDa)

6.55

Isoelectric Point (pI)

43.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013363)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G03380
fragaria_vesca	FvH4_4g30510
malus_domestica	MD16G1065100.v1.1
prunus_persica	Prupe.1G281800_v2.0.a1
pyrus_communis	pycom13g05850 pycom16g05690
rosa_chinensis	RchiOBHm_Chr4g0438881
rosa_laevigata	RLG00000006322
rosa_multiflora	Rmu_co8498131.1_g000001 Rmu_sc0002505.1_g000022
rosa_roxburghii	Rroxscaffold_5G00379900
rosa_rugosa	Rorug04G0314000
rosa_samantha	Rh4AG364800 Rh4BG375900 Rh4CG390000 Rh4DG370600
rosa_wichuraiana	Rw0G007290 Rw0G016840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1740
AasI	GACNNNNNNGTC	1 cut(s)	875
AatII	GACGTC	1 cut(s)	860
AccB1I	GGYRCC	1 cut(s)	981
AccII	CGCG	1 cut(s)	275
AccIII	TCCGGA	1 cut(s)	682
AciI	CCGC	4 cut(s)	409, 527, 978, 2230
AcsI	RAATTY	4 cut(s)	1141, 1474, 1820, 2221
AcuI	CTGAAG	4 cut(s)	1019, 1376, 1730, 1974
AcyI	GRCGYC	1 cut(s)	857
AdeI	CACNNNGTG	1 cut(s)	379
AfaI	GTAC	3 cut(s)	365, 968, 1175
AfiI	CCNNNNNNNGG	5 cut(s)	689, 991, 1278, 1491, 2216
AflIII	ACRYGT	2 cut(s)	273, 870
AjiI	CACGTC	1 cut(s)	289
AjnI	CCWGG	3 cut(s)	792, 1581, 2007
AjuI	GAANNNNNNNTTGG	2 cut(s)	2207, 2239
AleI	CACNNNNGTG	1 cut(s)	1881
AloI	GAACNNNNNNTCC	2 cut(s)	789, 821
AluBI	AGCT	8 cut(s)	7, 109, 210, 767, 785, 1370, 1676, 1955
AluI	AGCT	8 cut(s)	7, 109, 210, 767, 785, 1370, 1676, 1955
Alw21I	GWGCWC	2 cut(s)	787, 1078
Alw26I	GTCTC	1 cut(s)	864
Alw44I	GTGCAC	1 cut(s)	1074
AlwNI	CAGNNNCTG	2 cut(s)	2144, 2192
Aor13HI	TCCGGA	1 cut(s)	682
ApaLI	GTGCAC	1 cut(s)	1074
ApeKI	GCWGC	2 cut(s)	2144, 2249
ApoI	RAATTY	4 cut(s)	1141, 1474, 1820, 2221
ArsI	GACNNNNNNTTYG	2 cut(s)	847, 879
Asp700I	GAANNNNTTC	1 cut(s)	1715
AspS9I	GGNCC	1 cut(s)	597
AsuC2I	CCSGG	3 cut(s)	301, 329, 1733
AsuHPI	GGTGA	6 cut(s)	490, 740, 865, 1326, 1598, 2276
AvaII	GGWCC	1 cut(s)	597
AxyI	CCTNAGG	1 cut(s)	194
BaeGI	GKGCMC	4 cut(s)	288, 301, 986, 1078
BanI	GGYRCC	1 cut(s)	981
BanII	GRGCYC	2 cut(s)	536, 787
BauI	CACGAG	1 cut(s)	1791
Bbv12I	GWGCWC	2 cut(s)	787, 1078
BbvCI	CCTCAGC	2 cut(s)	105, 356
BbvI	GCAGC	2 cut(s)	2131, 2261
BccI	CCATC	9 cut(s)	533, 608, 683, 1014, 1424, 1517, 1995, 2154, 2191
BcgI	CGANNNNNNTGC	2 cut(s)	334, 368
BciT130I	CCWGG	3 cut(s)	794, 1583, 2009
BciVI	GTATCC	1 cut(s)	806
BcnI	CCSGG	3 cut(s)	301, 329, 1733
BcoDI	GTCTC	1 cut(s)	864
BfaI	CTAG	4 cut(s)	749, 1514, 1637, 1934
BfuI	GTATCC	1 cut(s)	806
BisI	GCNGC	3 cut(s)	2145, 2231, 2250
BlsI	GCNGC	3 cut(s)	2146, 2232, 2251
Bme1390I	CCNGG	6 cut(s)	301, 329, 794, 1583, 1733, 2009
Bme18I	GGWCC	1 cut(s)	597
BmgBI	CACGTC	1 cut(s)	289
BmgT120I	GGNCC	1 cut(s)	597
BmiI	GGNNCC	6 cut(s)	533, 599, 737, 983, 1600, 2006
BmrFI	CCNGG	6 cut(s)	301, 329, 794, 1583, 1733, 2009
BmrI	ACTGGG	2 cut(s)	127, 564
BmsI	GCATC	7 cut(s)	342, 889, 1189, 1330, 1486, 1951, 2112
BmuI	ACTGGG	2 cut(s)	127, 564
BplI	GAGNNNNNCTC	4 cut(s)	1144, 1176, 1316, 1348
BpmI	CTGGAG	1 cut(s)	78
Bpu10I	CCTNAGC	2 cut(s)	105, 356
BpuEI	CTTGAG	2 cut(s)	99, 2063
BpuMI	CCSGG	3 cut(s)	301, 329, 1733
Bsa29I	ATCGAT	1 cut(s)	186
BsaHI	GRCGYC	1 cut(s)	857
BsaJI	CCNNGG	7 cut(s)	601, 793, 1111, 1381, 1582, 1815, 1876
BsaWI	WCCGGW	1 cut(s)	682
Bsc4I	CCNNNNNNNGG	5 cut(s)	689, 991, 1278, 1491, 2216
Bse118I	RCCGGY	1 cut(s)	1837
Bse1I	ACTGG	3 cut(s)	133, 559, 739
Bse21I	CCTNAGG	1 cut(s)	194
Bse3DI	GCAATG	1 cut(s)	960
BseAI	TCCGGA	1 cut(s)	682
BseBI	CCWGG	3 cut(s)	794, 1583, 2009
BseCI	ATCGAT	1 cut(s)	186
BseDI	CCNNGG	7 cut(s)	601, 793, 1111, 1381, 1582, 1815, 1876
BseGI	GGATG	9 cut(s)	417, 490, 571, 717, 1435, 1501, 1886, 1942, 2103
BseLI	CCNNNNNNNGG	5 cut(s)	689, 991, 1278, 1491, 2216
BseMI	GCAATG	1 cut(s)	960
BseMII	CTCAG	6 cut(s)	119, 347, 1380, 2057, 2167, 2271
BseNI	ACTGG	3 cut(s)	133, 559, 739
BseRI	GAGGAG	3 cut(s)	401, 643, 734
BseSI	GKGCMC	4 cut(s)	288, 301, 986, 1078
BseXI	GCAGC	2 cut(s)	2131, 2261
BseYI	CCCAGC	2 cut(s)	151, 2099
BsgI	GTGCAG	4 cut(s)	689, 773, 1449, 2130
Bsh1236I	CGCG	1 cut(s)	275
BshNI	GGYRCC	1 cut(s)	981
BshVI	ATCGAT	1 cut(s)	186
BsiHKAI	GWGCWC	2 cut(s)	787, 1078
BsiSI	CCGG	5 cut(s)	301, 329, 683, 1732, 1838
BslFI	GGGAC	3 cut(s)	583, 902, 2036
BslI	CCNNNNNNNGG	5 cut(s)	689, 991, 1278, 1491, 2216
BsmAI	GTCTC	1 cut(s)	864
BsmBI	CGTCTC	1 cut(s)	864
BsmFI	GGGAC	3 cut(s)	583, 902, 2036
BsmI	GAATGC	2 cut(s)	922, 1343
Bsp1286I	GDGCHC	6 cut(s)	288, 301, 536, 787, 986, 1078
Bsp13I	TCCGGA	1 cut(s)	682
Bsp143I	GATC	6 cut(s)	238, 723, 934, 1319, 1780, 1903
Bsp19I	CCATGG	1 cut(s)	1111
BspACI	CCGC	4 cut(s)	409, 527, 978, 2230
BspCNI	CTCAG	6 cut(s)	118, 348, 1379, 2058, 2166, 2272
BspDI	ATCGAT	1 cut(s)	186
BspEI	TCCGGA	1 cut(s)	682
BspFNI	CGCG	1 cut(s)	275
BspHI	TCATGA	1 cut(s)	2118
BspLI	GGNNCC	6 cut(s)	533, 599, 737, 983, 1600, 2006
BspT107I	GGYRCC	1 cut(s)	981
BsrDI	GCAATG	1 cut(s)	960
BsrFI	RCCGGY	1 cut(s)	1837
BsrI	ACTGG	3 cut(s)	133, 559, 739
BssAI	RCCGGY	1 cut(s)	1837
BssECI	CCNNGG	7 cut(s)	601, 793, 1111, 1381, 1582, 1815, 1876
BssMI	GATC	6 cut(s)	238, 723, 934, 1319, 1780, 1903
BssNI	GRCGYC	1 cut(s)	857
BssSI	CACGAG	1 cut(s)	1791
BssT1I	CCWWGG	2 cut(s)	1111, 1815
Bst2BI	CACGAG	1 cut(s)	1791
Bst2UI	CCWGG	3 cut(s)	794, 1583, 2009
Bst4CI	ACNGT	3 cut(s)	1150, 1592, 1997
BstACI	GRCGYC	1 cut(s)	857
BstAPI	GCANNNNNTGC	1 cut(s)	2144
BstC8I	GCNNGC	6 cut(s)	212, 769, 1459, 1798, 1957, 2193
BstDEI	CTNAG	7 cut(s)	105, 194, 356, 1366, 2066, 2153, 2280
BstDSI	CCRYGG	3 cut(s)	601, 1111, 1876
BstF5I	GGATG	9 cut(s)	417, 490, 571, 717, 1435, 1501, 1886, 1942, 2103
BstFNI	CGCG	1 cut(s)	275
BstKTI	GATC	6 cut(s)	241, 726, 937, 1322, 1783, 1906
BstMAI	GTCTC	1 cut(s)	864
BstMBI	GATC	6 cut(s)	238, 723, 934, 1319, 1780, 1903
BstMWI	GCNNNNNNNGC	7 cut(s)	220, 1292, 1463, 1505, 1639, 1939, 2144
BstNI	CCWGG	3 cut(s)	794, 1583, 2009
BstNSI	RCATGY	2 cut(s)	874, 1773
BstSCI	CCNGG	6 cut(s)	299, 327, 792, 1581, 1731, 2007
BstSLI	GKGCMC	4 cut(s)	288, 301, 986, 1078
BstUI	CGCG	1 cut(s)	275
BstV1I	GCAGC	2 cut(s)	2131, 2261
BstXI	CCANNNNNNTGG	2 cut(s)	1118, 1883
Bsu15I	ATCGAT	1 cut(s)	186
Bsu36I	CCTNAGG	1 cut(s)	194
BsuI	GTATCC	1 cut(s)	806
BsuTUI	ATCGAT	1 cut(s)	186
BtgI	CCRYGG	3 cut(s)	601, 1111, 1876
BtgZI	GCGATG	1 cut(s)	1574
BtrI	CACGTC	1 cut(s)	289
BtsCI	GGATG	9 cut(s)	417, 490, 571, 717, 1435, 1501, 1886, 1942, 2103
BtsI	GCAGTG	2 cut(s)	1050, 1461
BtsIMutI	CAGTG	4 cut(s)	1050, 1461, 1621, 2193
Cac8I	GCNNGC	6 cut(s)	212, 769, 1459, 1798, 1957, 2193
CaiI	CAGNNNCTG	2 cut(s)	2144, 2192
CciI	TCATGA	1 cut(s)	2118
Cfr10I	RCCGGY	1 cut(s)	1837
Cfr13I	GGNCC	1 cut(s)	597
ClaI	ATCGAT	1 cut(s)	186
CseI	GACGC	3 cut(s)	264, 1622, 2038
Csp6I	GTAC	3 cut(s)	364, 967, 1174
CviQI	GTAC	3 cut(s)	364, 967, 1174
DdeI	CTNAG	7 cut(s)	105, 194, 356, 1366, 2066, 2153, 2280
DpnI	GATC	6 cut(s)	240, 725, 936, 1321, 1782, 1905
DpnII	GATC	6 cut(s)	238, 723, 934, 1319, 1780, 1903
DraIII	CACNNNGTG	1 cut(s)	379
DrdI	GACNNNNNNGTC	1 cut(s)	875
DseDI	GACNNNNNNGTC	1 cut(s)	875
EciI	GGCGGA	1 cut(s)	424
Ecl136II	GAGCTC	1 cut(s)	785
Eco130I	CCWWGG	2 cut(s)	1111, 1815
Eco24I	GRGCYC	2 cut(s)	536, 787
Eco47I	GGWCC	1 cut(s)	597
Eco53kI	GAGCTC	1 cut(s)	785
Eco57I	CTGAAG	4 cut(s)	1019, 1376, 1730, 1974
Eco81I	CCTNAGG	1 cut(s)	194
EcoICRI	GAGCTC	1 cut(s)	785
EcoRII	CCWGG	3 cut(s)	792, 1581, 2007
EcoT14I	CCWWGG	2 cut(s)	1111, 1815
EcoT22I	ATGCAT	2 cut(s)	1345, 1771
EcoT38I	GRGCYC	2 cut(s)	536, 787
ErhI	CCWWGG	2 cut(s)	1111, 1815
Esp3I	CGTCTC	1 cut(s)	864
FaqI	GGGAC	3 cut(s)	583, 902, 2036
FauI	CCCGC	2 cut(s)	520, 971
FauNDI	CATATG	1 cut(s)	1188
Fnu4HI	GCNGC	3 cut(s)	2145, 2231, 2250
FokI	GGATG	9 cut(s)	424, 497, 578, 724, 1442, 1508, 1893, 1929, 2090
FriOI	GRGCYC	2 cut(s)	536, 787
Fsp4HI	GCNGC	3 cut(s)	2145, 2231, 2250
FspBI	CTAG	4 cut(s)	749, 1514, 1637, 1934
GluI	GCNGC	3 cut(s)	2145, 2231, 2250
GsaI	CCCAGC	2 cut(s)	155, 2103
GsuI	CTGGAG	1 cut(s)	78
HapII	CCGG	5 cut(s)	301, 329, 683, 1732, 1838
HgaI	GACGC	3 cut(s)	264, 1622, 2038
Hin1I	GRCGYC	1 cut(s)	857
HincII	GTYRAC	2 cut(s)	552, 2028
HindII	GTYRAC	2 cut(s)	552, 2028
HindIII	AAGCTT	1 cut(s)	1953
HinfI	GANTC	8 cut(s)	188, 1325, 1502, 1578, 1887, 2024, 2070, 2267
HpaII	CCGG	5 cut(s)	301, 329, 683, 1732, 1838
HphI	GGTGA	6 cut(s)	490, 740, 865, 1326, 1598, 2276
Hpy166II	GTNNAC	8 cut(s)	552, 744, 948, 969, 1008, 1076, 1886, 2028
Hpy188I	TCNGA	6 cut(s)	896, 999, 1324, 1710, 1993, 2281
Hpy188III	TCNNGA	4 cut(s)	95, 683, 1637, 2119
Hpy8I	GTNNAC	8 cut(s)	552, 744, 948, 969, 1008, 1076, 1886, 2028
Hpy99I	CGWCG	2 cut(s)	317, 346
HpyAV	CCTTC	8 cut(s)	166, 457, 488, 496, 725, 1095, 1697, 1761
HpyCH4III	ACNGT	3 cut(s)	1150, 1592, 1997
HpyCH4IV	ACGT	3 cut(s)	288, 857, 1550
HpyF10VI	GCNNNNNNNGC	7 cut(s)	220, 1292, 1463, 1505, 1639, 1939, 2144
HpyF3I	CTNAG	7 cut(s)	105, 194, 356, 1366, 2066, 2153, 2280
HpySE526I	ACGT	3 cut(s)	288, 857, 1550
Hsp92I	GRCGYC	1 cut(s)	857
Kpn2I	TCCGGA	1 cut(s)	682
Kzo9I	GATC	6 cut(s)	238, 723, 934, 1319, 1780, 1903
LmnI	GCTCC	2 cut(s)	531, 2004
Lsp1109I	GCAGC	2 cut(s)	2131, 2261
LweI	GCATC	7 cut(s)	342, 889, 1189, 1330, 1486, 1951, 2112
MaeI	CTAG	4 cut(s)	749, 1514, 1637, 1934
MaeII	ACGT	3 cut(s)	288, 857, 1550
MaeIII	GTNAC	5 cut(s)	248, 434, 853, 905, 1586
MalI	GATC	6 cut(s)	240, 725, 936, 1321, 1782, 1905
MboI	GATC	6 cut(s)	238, 723, 934, 1319, 1780, 1903
MboII	GAAGA	7 cut(s)	155, 698, 1382, 1549, 1648, 1820, 1938
MfeI	CAATTG	2 cut(s)	292, 2199
MhlI	GDGCHC	6 cut(s)	288, 301, 536, 787, 986, 1078
MluI	ACGCGT	1 cut(s)	273
MlyI	GAGTC	3 cut(s)	1334, 1881, 2033
MmeI	TCCRAC	5 cut(s)	623, 969, 1116, 1324, 2131
Mph1103I	ATGCAT	2 cut(s)	1345, 1771
MroI	TCCGGA	1 cut(s)	682
MroXI	GAANNNNTTC	1 cut(s)	1715
MseI	TTAA	9 cut(s)	522, 705, 822, 840, 1125, 1439, 1625, 1854, 2013
MslI	CAYNNNNRTG	2 cut(s)	1881, 1947
MspI	CCGG	5 cut(s)	301, 329, 683, 1732, 1838
MspR9I	CCNGG	6 cut(s)	301, 329, 794, 1583, 1733, 2009
MunI	CAATTG	2 cut(s)	292, 2199
Mva1269I	GAATGC	2 cut(s)	922, 1343
MvaI	CCWGG	3 cut(s)	794, 1583, 2009
MvnI	CGCG	1 cut(s)	275
MwoI	GCNNNNNNNGC	7 cut(s)	220, 1292, 1463, 1505, 1639, 1939, 2144
NciI	CCSGG	3 cut(s)	301, 329, 1733
NcoI	CCATGG	1 cut(s)	1111
NdeI	CATATG	1 cut(s)	1188
NdeII	GATC	6 cut(s)	238, 723, 934, 1319, 1780, 1903
NlaIV	GGNNCC	6 cut(s)	533, 599, 737, 983, 1600, 2006
NmuCI	GTSAC	4 cut(s)	248, 434, 853, 1586
NsiI	ATGCAT	2 cut(s)	1345, 1771
NspI	RCATGY	2 cut(s)	874, 1773
OliI	CACNNNNGTG	1 cut(s)	1881
PagI	TCATGA	1 cut(s)	2118
PciI	ACATGT	1 cut(s)	870
PcsI	WCGNNNNNNNCGW	1 cut(s)	1556
PctI	GAATGC	2 cut(s)	922, 1343
PdmI	GAANNNNTTC	1 cut(s)	1715
PfeI	GAWTC	5 cut(s)	188, 1502, 1578, 2070, 2267
PkrI	GCNGC	3 cut(s)	2146, 2232, 2251
PleI	GAGTC	3 cut(s)	1333, 1881, 2032
PpsI	GAGTC	3 cut(s)	1333, 1881, 2032
PscI	ACATGT	1 cut(s)	870
PsiI	TTATAA	1 cut(s)	1740
Psp124BI	GAGCTC	1 cut(s)	787
Psp6I	CCWGG	3 cut(s)	792, 1581, 2007
PspFI	CCCAGC	2 cut(s)	151, 2099
PspGI	CCWGG	3 cut(s)	792, 1581, 2007
PspN4I	GGNNCC	6 cut(s)	533, 599, 737, 983, 1600, 2006
PspPI	GGNCC	1 cut(s)	597
PstNI	CAGNNNCTG	2 cut(s)	2144, 2192
RsaI	GTAC	3 cut(s)	365, 968, 1175
RsaNI	GTAC	3 cut(s)	364, 967, 1174
RseI	CAYNNNNRTG	2 cut(s)	1881, 1947
SacI	GAGCTC	1 cut(s)	787
SaqAI	TTAA	9 cut(s)	522, 705, 822, 840, 1125, 1439, 1625, 1854, 2013
SatI	GCNGC	3 cut(s)	2145, 2231, 2250
Sau3AI	GATC	6 cut(s)	238, 723, 934, 1319, 1780, 1903
Sau96I	GGNCC	1 cut(s)	597
SchI	GAGTC	3 cut(s)	1334, 1881, 2033
ScrFI	CCNGG	6 cut(s)	301, 329, 794, 1583, 1733, 2009
SduI	GDGCHC	6 cut(s)	288, 301, 536, 787, 986, 1078
SfaNI	GCATC	7 cut(s)	342, 889, 1189, 1330, 1486, 1951, 2112
SinI	GGWCC	1 cut(s)	597
SmiMI	CAYNNNNRTG	2 cut(s)	1881, 1947
SmlI	CTYRAG	2 cut(s)	114, 2042
SmoI	CTYRAG	2 cut(s)	114, 2042
SsiI	CCGC	4 cut(s)	409, 527, 978, 2230
SspMI	CTAG	4 cut(s)	749, 1514, 1637, 1934
SstI	GAGCTC	1 cut(s)	787
StyD4I	CCNGG	6 cut(s)	299, 327, 792, 1581, 1731, 2007
StyI	CCWWGG	2 cut(s)	1111, 1815
TaaI	ACNGT	3 cut(s)	1150, 1592, 1997
TaiI	ACGT	3 cut(s)	291, 860, 1553
TauI	GCSGC	1 cut(s)	2233
TfiI	GAWTC	5 cut(s)	188, 1502, 1578, 2070, 2267
Tru1I	TTAA	9 cut(s)	522, 705, 822, 840, 1125, 1439, 1625, 1854, 2013
Tru9I	TTAA	9 cut(s)	522, 705, 822, 840, 1125, 1439, 1625, 1854, 2013
TscAI	CASTG	4 cut(s)	1057, 1468, 1621, 2193
TseFI	GTSAC	4 cut(s)	248, 434, 853, 1586
TseI	GCWGC	2 cut(s)	2144, 2249
Tsp45I	GTSAC	4 cut(s)	248, 434, 853, 1586
TspGWI	ACGGA	3 cut(s)	1591, 1893, 2045
TspRI	CASTG	4 cut(s)	1057, 1468, 1621, 2193
VneI	GTGCAC	1 cut(s)	1074
VpaK11BI	GGWCC	1 cut(s)	597
XapI	RAATTY	4 cut(s)	1141, 1474, 1820, 2221
XbaI	TCTAGA	1 cut(s)	1636
XceI	RCATGY	2 cut(s)	874, 1773
XmnI	GAANNNNTTC	1 cut(s)	1715
XspI	CTAG	4 cut(s)	749, 1514, 1637, 1934
ZraI	GACGTC	1 cut(s)	858
Zsp2I	ATGCAT	2 cut(s)	1345, 1771

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.