Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G03380 |
| fragaria_vesca | FvH4_4g30510 |
| malus_domestica | MD16G1065100.v1.1 |
| prunus_persica | Prupe.1G281800_v2.0.a1 |
| pyrus_communis | pycom13g05850 pycom16g05690 |
| rosa_chinensis | RchiOBHm_Chr4g0438881 |
| rosa_laevigata | RLG00000006322 |
| rosa_multiflora | Rmu_co8498131.1_g000001 Rmu_sc0002505.1_g000022 |
| rosa_roxburghii | Rroxscaffold_5G00379900 |
| rosa_rugosa | Rorug04G0314000 |
| rosa_samantha | Rh4AG364800 Rh4BG375900 Rh4CG390000 Rh4DG370600 |
| rosa_wichuraiana | Rw0G007290 Rw0G016840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 3 cut(s) | 890, 1163, 1250 |
| AccII | CGCG | 3 cut(s) | 58, 148, 1934 |
| AciI | CCGC | 6 cut(s) | 73, 496, 620, 1506, 1723, 1932 |
| AclI | AACGTT | 1 cut(s) | 456 |
| AcoI | YGGCCR | 1 cut(s) | 543 |
| AcsI | RAATTY | 2 cut(s) | 1108, 1264 |
| AcuI | CTGAAG | 3 cut(s) | 93, 497, 1989 |
| AcvI | CACGTG | 1 cut(s) | 1566 |
| AfaI | GTAC | 7 cut(s) | 36, 268, 302, 380, 787, 983, 1390 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 39, 704, 705, 1293, 1506 |
| AflII | CTTAAG | 1 cut(s) | 209 |
| AflIII | ACRYGT | 3 cut(s) | 56, 885, 1185 |
| AhlI | ACTAGT | 1 cut(s) | 422 |
| AjnI | CCWGG | 2 cut(s) | 1746, 2022 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 188, 220, 595, 627 |
| AluBI | AGCT | 6 cut(s) | 282, 800, 858, 937, 1691, 1970 |
| AluI | AGCT | 6 cut(s) | 282, 800, 858, 937, 1691, 1970 |
| Alw21I | GWGCWC | 1 cut(s) | 1093 |
| Alw26I | GTCTC | 1 cut(s) | 1049 |
| Alw44I | GTGCAC | 1 cut(s) | 1089 |
| Ama87I | CYCGRG | 1 cut(s) | 1145 |
| AoxI | GGCC | 5 cut(s) | 241, 543, 1008, 1447, 1827 |
| ApaLI | GTGCAC | 1 cut(s) | 1089 |
| ApeKI | GCWGC | 1 cut(s) | 1695 |
| ApoI | RAATTY | 2 cut(s) | 1108, 1264 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 679, 711, 982, 1014 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 755 |
| AspA2I | CCTAGG | 1 cut(s) | 1396 |
| AspLEI | GCGC | 1 cut(s) | 150 |
| AsuC2I | CCSGG | 2 cut(s) | 316, 344 |
| AsuHPI | GGTGA | 5 cut(s) | 376, 880, 1054, 1223, 1613 |
| AsuII | TTCGAA | 1 cut(s) | 1230 |
| AvaI | CYCGRG | 1 cut(s) | 1145 |
| AvrII | CCTAGG | 1 cut(s) | 1396 |
| BaeGI | GKGCMC | 2 cut(s) | 316, 1093 |
| BalI | TGGCCA | 1 cut(s) | 545 |
| BanII | GRGCYC | 1 cut(s) | 1659 |
| BauI | CACGAG | 2 cut(s) | 615, 1806 |
| BbrPI | CACGTG | 1 cut(s) | 1566 |
| BbsI | GAAGAC | 1 cut(s) | 1161 |
| Bbv12I | GWGCWC | 1 cut(s) | 1093 |
| BbvCI | CCTCAGC | 1 cut(s) | 371 |
| BbvI | GCAGC | 1 cut(s) | 1707 |
| BceAI | ACGGC | 2 cut(s) | 256, 795 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 181, 215 |
| BciT130I | CCWGG | 2 cut(s) | 1748, 2024 |
| BcnI | CCSGG | 2 cut(s) | 316, 344 |
| BcoDI | GTCTC | 1 cut(s) | 1049 |
| BcuI | ACTAGT | 1 cut(s) | 422 |
| BfaI | CTAG | 7 cut(s) | 137, 423, 1178, 1397, 1529, 1619, 1949 |
| BfrI | CTTAAG | 1 cut(s) | 209 |
| BisI | GCNGC | 2 cut(s) | 1696, 1932 |
| BlnI | CCTAGG | 1 cut(s) | 1396 |
| BlsI | GCNGC | 2 cut(s) | 1697, 1933 |
| Bme1390I | CCNGG | 4 cut(s) | 316, 344, 1748, 2024 |
| BmeT110I | CYCGRG | 1 cut(s) | 1145 |
| BmiI | GGNNCC | 3 cut(s) | 752, 1615, 2021 |
| BmrFI | CCNGG | 4 cut(s) | 316, 344, 1748, 2024 |
| BmsI | GCATC | 5 cut(s) | 357, 1204, 1345, 1501, 1966 |
| BoxI | GACNNNNGTC | 1 cut(s) | 20 |
| BpiI | GAAGAC | 1 cut(s) | 1161 |
| Bpu10I | CCTNAGC | 1 cut(s) | 371 |
| Bpu14I | TTCGAA | 1 cut(s) | 1230 |
| BpuMI | CCSGG | 2 cut(s) | 316, 344 |
| Bsa29I | ATCGAT | 2 cut(s) | 201, 948 |
| BsaAI | YACGTR | 1 cut(s) | 1566 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1339, 2099 |
| BsaI | GGTCTC | 1 cut(s) | 1049 |
| BsaJI | CCNNGG | 7 cut(s) | 238, 402, 1126, 1396, 1746, 1830, 1891 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 230, 260 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 39, 704, 705, 1293, 1506 |
| Bse118I | RCCGGY | 1 cut(s) | 1852 |
| Bse1I | ACTGG | 2 cut(s) | 546, 847 |
| Bse3DI | GCAATG | 5 cut(s) | 523, 975, 1254, 1581, 2112 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1339, 2099 |
| BseBI | CCWGG | 2 cut(s) | 1748, 2024 |
| BseCI | ATCGAT | 2 cut(s) | 201, 948 |
| BseDI | CCNNGG | 7 cut(s) | 238, 402, 1126, 1396, 1746, 1830, 1891 |
| BseGI | GGATG | 9 cut(s) | 12, 586, 605, 732, 1033, 1450, 1516, 1901, 1957 |
| BseJI | GATNNNNATC | 2 cut(s) | 1339, 2099 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 39, 704, 705, 1293, 1506 |
| BseMI | GCAATG | 5 cut(s) | 523, 975, 1254, 1581, 2112 |
| BseMII | CTCAG | 1 cut(s) | 362 |
| BseNI | ACTGG | 2 cut(s) | 546, 847 |
| BseRI | GAGGAG | 2 cut(s) | 170, 749 |
| BseSI | GKGCMC | 2 cut(s) | 316, 1093 |
| BseXI | GCAGC | 1 cut(s) | 1707 |
| BsgI | GTGCAG | 2 cut(s) | 211, 1464 |
| Bsh1236I | CGCG | 3 cut(s) | 58, 148, 1934 |
| BshFI | GGCC | 5 cut(s) | 243, 545, 1010, 1449, 1829 |
| BshVI | ATCGAT | 2 cut(s) | 201, 948 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1093 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1145 |
| BsiSI | CCGG | 3 cut(s) | 316, 344, 1853 |
| BslFI | GGGAC | 4 cut(s) | 512, 681, 1729, 2056 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 39, 704, 705, 1293, 1506 |
| BsmAI | GTCTC | 1 cut(s) | 1049 |
| BsmFI | GGGAC | 4 cut(s) | 512, 681, 1729, 2056 |
| BsmI | GAATGC | 2 cut(s) | 1854, 1950 |
| BsnI | GGCC | 5 cut(s) | 243, 545, 1010, 1449, 1829 |
| Bso31I | GGTCTC | 1 cut(s) | 1049 |
| BsoBI | CYCGRG | 1 cut(s) | 1145 |
| Bsp119I | TTCGAA | 1 cut(s) | 1230 |
| Bsp1286I | GDGCHC | 3 cut(s) | 316, 1093, 1659 |
| Bsp1407I | TGTACA | 1 cut(s) | 785 |
| Bsp143I | GATC | 6 cut(s) | 253, 328, 949, 1334, 1795, 1918 |
| Bsp19I | CCATGG | 2 cut(s) | 1126, 1891 |
| BspACI | CCGC | 6 cut(s) | 73, 496, 620, 1506, 1723, 1932 |
| BspANI | GGCC | 5 cut(s) | 243, 545, 1010, 1449, 1829 |
| BspCNI | CTCAG | 1 cut(s) | 363 |
| BspDI | ATCGAT | 2 cut(s) | 201, 948 |
| BspFNI | CGCG | 3 cut(s) | 58, 148, 1934 |
| BspLI | GGNNCC | 3 cut(s) | 752, 1615, 2021 |
| BspT104I | TTCGAA | 1 cut(s) | 1230 |
| BspTI | CTTAAG | 1 cut(s) | 209 |
| BspTNI | GGTCTC | 1 cut(s) | 1049 |
| BsrDI | GCAATG | 5 cut(s) | 523, 975, 1254, 1581, 2112 |
| BsrFI | RCCGGY | 1 cut(s) | 1852 |
| BsrGI | TGTACA | 1 cut(s) | 785 |
| BsrI | ACTGG | 2 cut(s) | 546, 847 |
| BssAI | RCCGGY | 1 cut(s) | 1852 |
| BssECI | CCNNGG | 7 cut(s) | 238, 402, 1126, 1396, 1746, 1830, 1891 |
| BssMI | GATC | 6 cut(s) | 253, 328, 949, 1334, 1795, 1918 |
| BssSI | CACGAG | 2 cut(s) | 615, 1806 |
| BssT1I | CCWWGG | 4 cut(s) | 1126, 1396, 1830, 1891 |
| Bst2BI | CACGAG | 2 cut(s) | 615, 1806 |
| Bst2UI | CCWGG | 2 cut(s) | 1748, 2024 |
| Bst4CI | ACNGT | 7 cut(s) | 34, 1095, 1165, 1320, 1485, 1561, 1743 |
| Bst6I | CTCTTC | 2 cut(s) | 882, 1818 |
| BstAFI | CTTAAG | 1 cut(s) | 209 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 86 |
| BstAUI | TGTACA | 1 cut(s) | 785 |
| BstBAI | YACGTR | 1 cut(s) | 1566 |
| BstBI | TTCGAA | 1 cut(s) | 1230 |
| BstC8I | GCNNGC | 4 cut(s) | 1451, 1693, 1813, 1972 |
| BstDEI | CTNAG | 1 cut(s) | 371 |
| BstDSI | CCRYGG | 3 cut(s) | 238, 1126, 1891 |
| BstF5I | GGATG | 9 cut(s) | 12, 586, 605, 732, 1033, 1450, 1516, 1901, 1957 |
| BstFNI | CGCG | 3 cut(s) | 58, 148, 1934 |
| BstHHI | GCGC | 1 cut(s) | 150 |
| BstKTI | GATC | 6 cut(s) | 256, 331, 952, 1337, 1798, 1921 |
| BstMAI | GTCTC | 1 cut(s) | 1049 |
| BstMBI | GATC | 6 cut(s) | 253, 328, 949, 1334, 1795, 1918 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 86, 1307, 1520, 1654, 1858, 1954 |
| BstNI | CCWGG | 2 cut(s) | 1748, 2024 |
| BstNSI | RCATGY | 5 cut(s) | 889, 1189, 1389, 1788, 2136 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 20 |
| BstSCI | CCNGG | 4 cut(s) | 314, 342, 1746, 2022 |
| BstSLI | GKGCMC | 2 cut(s) | 316, 1093 |
| BstUI | CGCG | 3 cut(s) | 58, 148, 1934 |
| BstV1I | GCAGC | 1 cut(s) | 1707 |
| BstV2I | GAAGAC | 1 cut(s) | 1161 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1133, 1898 |
| Bsu15I | ATCGAT | 2 cut(s) | 201, 948 |
| BsuRI | GGCC | 5 cut(s) | 243, 545, 1010, 1449, 1829 |
| BsuTUI | ATCGAT | 2 cut(s) | 201, 948 |
| BtgI | CCRYGG | 3 cut(s) | 238, 1126, 1891 |
| BtgZI | GCGATG | 1 cut(s) | 1404 |
| BtsCI | GGATG | 9 cut(s) | 12, 586, 605, 732, 1033, 1450, 1516, 1901, 1957 |
| BtsI | GCAGTG | 2 cut(s) | 1065, 1476 |
| BtsIMutI | CAGTG | 4 cut(s) | 1065, 1476, 1481, 1739 |
| Cac8I | GCNNGC | 4 cut(s) | 1451, 1693, 1813, 1972 |
| CfoI | GCGC | 1 cut(s) | 150 |
| Cfr10I | RCCGGY | 1 cut(s) | 1852 |
| ClaI | ATCGAT | 2 cut(s) | 201, 948 |
| CseI | GACGC | 1 cut(s) | 427 |
| Csp6I | GTAC | 7 cut(s) | 35, 267, 301, 379, 786, 982, 1389 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 654, 689 |
| CviQI | GTAC | 7 cut(s) | 35, 267, 301, 379, 786, 982, 1389 |
| DdeI | CTNAG | 1 cut(s) | 371 |
| DpnI | GATC | 6 cut(s) | 255, 330, 951, 1336, 1797, 1920 |
| DpnII | GATC | 6 cut(s) | 253, 328, 949, 1334, 1795, 1918 |
| DrdI | GACNNNNNNGTC | 3 cut(s) | 890, 1163, 1250 |
| DseDI | GACNNNNNNGTC | 3 cut(s) | 890, 1163, 1250 |
| EaeI | YGGCCR | 1 cut(s) | 543 |
| Eam1104I | CTCTTC | 2 cut(s) | 882, 1818 |
| EarI | CTCTTC | 2 cut(s) | 882, 1818 |
| EciI | GGCGGA | 1 cut(s) | 1738 |
| Eco130I | CCWWGG | 4 cut(s) | 1126, 1396, 1830, 1891 |
| Eco147I | AGGCCT | 2 cut(s) | 1010, 1829 |
| Eco24I | GRGCYC | 1 cut(s) | 1659 |
| Eco31I | GGTCTC | 1 cut(s) | 1049 |
| Eco32I | GATATC | 1 cut(s) | 2101 |
| Eco57I | CTGAAG | 3 cut(s) | 93, 497, 1989 |
| Eco72I | CACGTG | 1 cut(s) | 1566 |
| Eco88I | CYCGRG | 1 cut(s) | 1145 |
| EcoRI | GAATTC | 1 cut(s) | 1264 |
| EcoRII | CCWGG | 2 cut(s) | 1746, 2022 |
| EcoRV | GATATC | 1 cut(s) | 2101 |
| EcoT14I | CCWWGG | 4 cut(s) | 1126, 1396, 1830, 1891 |
| EcoT22I | ATGCAT | 1 cut(s) | 1786 |
| EcoT38I | GRGCYC | 1 cut(s) | 1659 |
| ErhI | CCWWGG | 4 cut(s) | 1126, 1396, 1830, 1891 |
| FaqI | GGGAC | 4 cut(s) | 512, 681, 1729, 2056 |
| FauI | CCCGC | 2 cut(s) | 489, 1499 |
| FauNDI | CATATG | 2 cut(s) | 1203, 1303 |
| Fnu4HI | GCNGC | 2 cut(s) | 1696, 1932 |
| FokI | GGATG | 9 cut(s) | 19, 593, 612, 739, 1040, 1457, 1523, 1908, 1944 |
| FriOI | GRGCYC | 1 cut(s) | 1659 |
| Fsp4HI | GCNGC | 2 cut(s) | 1696, 1932 |
| FspBI | CTAG | 7 cut(s) | 137, 423, 1178, 1397, 1529, 1619, 1949 |
| GlaI | GCGC | 1 cut(s) | 149 |
| GluI | GCNGC | 2 cut(s) | 1696, 1932 |
| HaeIII | GGCC | 5 cut(s) | 243, 545, 1010, 1449, 1829 |
| HapII | CCGG | 3 cut(s) | 316, 344, 1853 |
| HgaI | GACGC | 1 cut(s) | 427 |
| HhaI | GCGC | 1 cut(s) | 150 |
| Hin6I | GCGC | 1 cut(s) | 148 |
| HinP1I | GCGC | 1 cut(s) | 148 |
| HincII | GTYRAC | 1 cut(s) | 567 |
| HindII | GTYRAC | 1 cut(s) | 567 |
| HindIII | AAGCTT | 1 cut(s) | 1968 |
| HinfI | GANTC | 6 cut(s) | 203, 820, 1157, 1340, 1517, 1902 |
| HpaII | CCGG | 3 cut(s) | 316, 344, 1853 |
| HphI | GGTGA | 5 cut(s) | 376, 880, 1054, 1223, 1613 |
| Hpy166II | GTNNAC | 8 cut(s) | 62, 567, 786, 984, 1023, 1091, 1183, 1901 |
| Hpy188I | TCNGA | 9 cut(s) | 112, 130, 443, 477, 911, 1169, 1339, 2008, 2105 |
| Hpy188III | TCNNGA | 7 cut(s) | 466, 551, 881, 1001, 1675, 1911, 1961 |
| Hpy8I | GTNNAC | 8 cut(s) | 62, 567, 786, 984, 1023, 1091, 1183, 1901 |
| HpyAV | CCTTC | 7 cut(s) | 13, 355, 472, 511, 1110, 1354, 1712 |
| HpyCH4III | ACNGT | 7 cut(s) | 34, 1095, 1165, 1320, 1485, 1561, 1743 |
| HpyCH4IV | ACGT | 4 cut(s) | 303, 456, 761, 1565 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 86, 1307, 1520, 1654, 1858, 1954 |
| HpyF3I | CTNAG | 1 cut(s) | 371 |
| HpySE526I | ACGT | 4 cut(s) | 303, 456, 761, 1565 |
| HspAI | GCGC | 1 cut(s) | 148 |
| Kzo9I | GATC | 6 cut(s) | 253, 328, 949, 1334, 1795, 1918 |
| LmnI | GCTCC | 2 cut(s) | 768, 2019 |
| Lsp1109I | GCAGC | 1 cut(s) | 1707 |
| LweI | GCATC | 5 cut(s) | 357, 1204, 1345, 1501, 1966 |
| MaeI | CTAG | 7 cut(s) | 137, 423, 1178, 1397, 1529, 1619, 1949 |
| MaeII | ACGT | 4 cut(s) | 303, 456, 761, 1565 |
| MaeIII | GTNAC | 4 cut(s) | 868, 1220, 1561, 1601 |
| MalI | GATC | 6 cut(s) | 255, 330, 951, 1336, 1797, 1920 |
| MboI | GATC | 6 cut(s) | 253, 328, 949, 1334, 1795, 1918 |
| MhlI | GDGCHC | 3 cut(s) | 316, 1093, 1659 |
| MlsI | TGGCCA | 1 cut(s) | 545 |
| MluI | ACGCGT | 1 cut(s) | 56 |
| MluNI | TGGCCA | 1 cut(s) | 545 |
| MlyI | GAGTC | 2 cut(s) | 1151, 1896 |
| MmeI | TCCRAC | 3 cut(s) | 273, 1131, 1339 |
| Mox20I | TGGCCA | 1 cut(s) | 545 |
| Mph1103I | ATGCAT | 1 cut(s) | 1786 |
| MroXI | GAANNNNTTC | 1 cut(s) | 755 |
| MscI | TGGCCA | 1 cut(s) | 545 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1096, 1896, 1962 |
| Msp20I | TGGCCA | 1 cut(s) | 545 |
| MspCI | CTTAAG | 1 cut(s) | 209 |
| MspI | CCGG | 3 cut(s) | 316, 344, 1853 |
| MspR9I | CCNGG | 4 cut(s) | 316, 344, 1748, 2024 |
| Mva1269I | GAATGC | 2 cut(s) | 1854, 1950 |
| MvaI | CCWGG | 2 cut(s) | 1748, 2024 |
| MvnI | CGCG | 3 cut(s) | 58, 148, 1934 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 86, 1307, 1520, 1654, 1858, 1954 |
| NciI | CCSGG | 2 cut(s) | 316, 344 |
| NcoI | CCATGG | 2 cut(s) | 1126, 1891 |
| NdeI | CATATG | 2 cut(s) | 1203, 1303 |
| NdeII | GATC | 6 cut(s) | 253, 328, 949, 1334, 1795, 1918 |
| NlaIV | GGNNCC | 3 cut(s) | 752, 1615, 2021 |
| NmeAIII | GCCGAG | 1 cut(s) | 427 |
| NmuCI | GTSAC | 3 cut(s) | 868, 1561, 1601 |
| NsiI | ATGCAT | 1 cut(s) | 1786 |
| NspI | RCATGY | 5 cut(s) | 889, 1189, 1389, 1788, 2136 |
| NspV | TTCGAA | 1 cut(s) | 1230 |
| PceI | AGGCCT | 2 cut(s) | 1010, 1829 |
| PciI | ACATGT | 2 cut(s) | 885, 1185 |
| PctI | GAATGC | 2 cut(s) | 1854, 1950 |
| PdmI | GAANNNNTTC | 1 cut(s) | 755 |
| PfeI | GAWTC | 4 cut(s) | 203, 820, 1340, 1517 |
| PkrI | GCNGC | 2 cut(s) | 1697, 1933 |
| PleI | GAGTC | 2 cut(s) | 1151, 1896 |
| PmaCI | CACGTG | 1 cut(s) | 1566 |
| PmlI | CACGTG | 1 cut(s) | 1566 |
| PpsI | GAGTC | 2 cut(s) | 1151, 1896 |
| Ppu21I | YACGTR | 1 cut(s) | 1566 |
| PscI | ACATGT | 2 cut(s) | 885, 1185 |
| PshAI | GACNNNNGTC | 1 cut(s) | 20 |
| Psp1406I | AACGTT | 1 cut(s) | 456 |
| Psp6I | CCWGG | 2 cut(s) | 1746, 2022 |
| PspCI | CACGTG | 1 cut(s) | 1566 |
| PspGI | CCWGG | 2 cut(s) | 1746, 2022 |
| PspN4I | GGNNCC | 3 cut(s) | 752, 1615, 2021 |
| RsaI | GTAC | 7 cut(s) | 36, 268, 302, 380, 787, 983, 1390 |
| RsaNI | GTAC | 7 cut(s) | 35, 267, 301, 379, 786, 982, 1389 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1096, 1896, 1962 |
| SatI | GCNGC | 2 cut(s) | 1696, 1932 |
| Sau3AI | GATC | 6 cut(s) | 253, 328, 949, 1334, 1795, 1918 |
| SchI | GAGTC | 2 cut(s) | 1151, 1896 |
| ScrFI | CCNGG | 4 cut(s) | 316, 344, 1748, 2024 |
| SduI | GDGCHC | 3 cut(s) | 316, 1093, 1659 |
| SfaNI | GCATC | 5 cut(s) | 357, 1204, 1345, 1501, 1966 |
| SfuI | TTCGAA | 1 cut(s) | 1230 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1096, 1896, 1962 |
| SmlI | CTYRAG | 1 cut(s) | 209 |
| SmoI | CTYRAG | 1 cut(s) | 209 |
| SpeI | ACTAGT | 1 cut(s) | 422 |
| SseBI | AGGCCT | 2 cut(s) | 1010, 1829 |
| SsiI | CCGC | 6 cut(s) | 73, 496, 620, 1506, 1723, 1932 |
| SspMI | CTAG | 7 cut(s) | 137, 423, 1178, 1397, 1529, 1619, 1949 |
| StuI | AGGCCT | 2 cut(s) | 1010, 1829 |
| StyD4I | CCNGG | 4 cut(s) | 314, 342, 1746, 2022 |
| StyI | CCWWGG | 4 cut(s) | 1126, 1396, 1830, 1891 |
| TaaI | ACNGT | 7 cut(s) | 34, 1095, 1165, 1320, 1485, 1561, 1743 |
| TaiI | ACGT | 4 cut(s) | 306, 459, 764, 1568 |
| TaqI | TCGA | 7 cut(s) | 201, 327, 467, 882, 948, 1230, 1794 |
| TatI | WGTACW | 2 cut(s) | 785, 1388 |
| TauI | GCSGC | 1 cut(s) | 1934 |
| TfiI | GAWTC | 4 cut(s) | 203, 820, 1340, 1517 |
| TscAI | CASTG | 4 cut(s) | 1072, 1483, 1488, 1746 |
| TseFI | GTSAC | 3 cut(s) | 868, 1561, 1601 |
| TseI | GCWGC | 1 cut(s) | 1695 |
| Tsp45I | GTSAC | 3 cut(s) | 868, 1561, 1601 |
| TspDTI | ATGAA | 9 cut(s) | 812, 1071, 1313, 1320, 1407, 1787, 1828, 1980, 2063 |
| TspGWI | ACGGA | 1 cut(s) | 1040 |
| TspRI | CASTG | 4 cut(s) | 1072, 1483, 1488, 1746 |
| Vha464I | CTTAAG | 1 cut(s) | 209 |
| VneI | GTGCAC | 1 cut(s) | 1089 |
| XapI | RAATTY | 2 cut(s) | 1108, 1264 |
| XceI | RCATGY | 5 cut(s) | 889, 1189, 1389, 1788, 2136 |
| XmaJI | CCTAGG | 1 cut(s) | 1396 |
| XmnI | GAANNNNTTC | 1 cut(s) | 755 |
| XspI | CTAG | 7 cut(s) | 137, 423, 1178, 1397, 1529, 1619, 1949 |
| Zsp2I | ATGCAT | 1 cut(s) | 1786 |