AT2G07741

Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Key component of the proton channel

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0014087
Physical Location & Seq
Forward (+)
3502319 .. 3503476
1158 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G07741.1

Sequence Viewer

Length: 1158 bp
ATGCGACGAATCTTTTTGTTTGATGAAAATAGTCTTAATTCAAGTTCCACCATTGATACATCTTCTGCTTCCACCATTGATACATCTTTTGCGAGTCAATGCACTAACTTTTCTAGTGGTCAAGCGTCCGGTACTCAGGATACTCATGCTGGTATTTTTGAGGATTGTCCGGGCCTTAATCCTAACGATGAGCGTGTAGTAGAGCTGCAATGTGAGATACGCGAGAAGTGTGAGGCATTAACGCAAGATCCCGAAATGGGCTTGATTTTGGGCGAAGCTTTACATGCGGAAAGCGACAATGTCCCTTTTTTGCAGTCCATTGCTGATGATTTAACCCAAAACGGAGTATCCGGGGAAGCCTTTCAAGAAGCTCTGAATATAGTGGGACAGGCGGCGGCCTCCCCACTGGACCAATTTGAGATTGTCCCATTGATTCCTATGCATATCGGAAACTTCTATTTCTCATTCACAAATCCATCTTTGTTCATGCTGCTAACTCTGAGTTTTTTCCTACTTCTGATTCATTTTGTTACTAAAAAGGGAGGAGGAAACTTAGTCCCAAATGCTTGGCAATCCTTGGTAGAGCTTCTTTATGATTTCGTGCTGAACCTGGTAAAGGAACAAATAGGTGGTCTTTCCGGGAATGTGAAACAAATGTTTTTCCCTTGCATCTTGGTCACTTTTCTTTTTTTGTTATTTTGTAATCTTCAGGGTATGATACCTTATAGCTTCACAGTGACAAGTCATTTTCTCATTACTTTGGCTCTCTCATTTTCGATTTTTATTGGCATTACTATAGTGGGATTTCAAAGACATGGGCTTCATTTTTTCAGCTTTTTATTACCCGCAGGAGTCCCACTGCCGTTAGCACCTTTTTTAGTACTCCTTGAGCTAATTTCTTATTGTTTTCGCGCATTAAGCTTAGGAATACGTTTATTTGCTAATATGATGGCCGGTCATAGTTTAGTAAAGATTTTAAGTGGGTTCGCTTGGACTATGCTATGTATGAATGATATTTTCTATTTTATAGGGGCTCTTGGTCCTTTATTTATAGTTCTTGCATTAACCGGTCTGGAATTAGGTGTAGCTATATTACAAGCTTATGTTTTTACGATCTTAATCTGTATTTACTTGAATGATGCTATAAATCTCCATTAA

Protein Analysis

385

Amino Acids

42.35

Weight (kDa)

4.65

Isoelectric Point (pI)

33.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ATP-synt_A PF00119 161 - 379 3e-56 ATP synthase A chain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 222, 912
AciI CCGC 4 cut(s) 287, 392, 395, 846
AclWI GGATC 1 cut(s) 242
AcoI YGGCCR 1 cut(s) 951
AcuI CTGAAG 1 cut(s) 692
AfaI GTAC 2 cut(s) 133, 882
AfiI CCNNNNNNNGG 2 cut(s) 257, 616
AgeI ACCGGT 1 cut(s) 1067
AgsI TTSAA 4 cut(s) 42, 365, 809, 1135
AjnI CCWGG 1 cut(s) 609
AlwI GGATC 1 cut(s) 242
AoxI GGCC 3 cut(s) 172, 396, 951
ApeKI GCWGC 2 cut(s) 205, 490
ArsI GACNNNNNNTTYG 2 cut(s) 616, 648
AsiGI ACCGGT 1 cut(s) 1067
Asp700I GAANNNNTTC 1 cut(s) 360
AspLEI GCGC 1 cut(s) 914
AspS9I GGNCC 3 cut(s) 172, 409, 1040
AsuC2I CCSGG 3 cut(s) 171, 352, 640
AvaII GGWCC 2 cut(s) 409, 1040
BanII GRGCYC 1 cut(s) 1036
BbvI GCAGC 2 cut(s) 192, 477
BccI CCATC 2 cut(s) 484, 943
BceAI ACGGC 1 cut(s) 847
BciT130I CCWGG 1 cut(s) 611
BciVI GTATCC 2 cut(s) 133, 358
BcnI CCSGG 3 cut(s) 171, 352, 640
BfaI CTAG 1 cut(s) 114
BfmI CTRYAG 1 cut(s) 795
BfuI GTATCC 2 cut(s) 133, 358
BisI GCNGC 4 cut(s) 206, 393, 396, 491
BlsI GCNGC 4 cut(s) 207, 394, 397, 492
BmcAI AGTACT 1 cut(s) 882
Bme1390I CCNGG 4 cut(s) 171, 352, 611, 640
Bme18I GGWCC 2 cut(s) 409, 1040
BmgT120I GGNCC 3 cut(s) 172, 409, 1040
BmrFI CCNGG 4 cut(s) 171, 352, 611, 640
BmsI GCATC 2 cut(s) 678, 1129
Bpu10I CCTNAGC 1 cut(s) 922
BpuEI CTTGAG 1 cut(s) 908
BpuMI CCSGG 3 cut(s) 171, 352, 640
BsaBI GATNNNNATC 1 cut(s) 1118
BsaJI CCNNGG 2 cut(s) 351, 576
BsaWI WCCGGW 2 cut(s) 128, 1067
Bsc4I CCNNNNNNNGG 2 cut(s) 257, 616
Bse118I RCCGGY 2 cut(s) 953, 1067
Bse1I ACTGG 1 cut(s) 411
Bse3DI GCAATG 2 cut(s) 215, 318
Bse8I GATNNNNATC 1 cut(s) 1118
BseBI CCWGG 1 cut(s) 611
BseDI CCNNGG 2 cut(s) 351, 576
BseJI GATNNNNATC 1 cut(s) 1118
BseLI CCNNNNNNNGG 2 cut(s) 257, 616
BseMI GCAATG 2 cut(s) 215, 318
BseMII CTCAG 2 cut(s) 149, 491
BseNI ACTGG 1 cut(s) 411
BseRI GAGGAG 1 cut(s) 558
BseXI GCAGC 2 cut(s) 192, 477
Bsh1236I CGCG 2 cut(s) 222, 912
BshFI GGCC 3 cut(s) 174, 398, 953
BshTI ACCGGT 1 cut(s) 1067
BsiSI CCGG 6 cut(s) 129, 170, 351, 639, 954, 1068
BslFI GGGAC 5 cut(s) 287, 399, 410, 542, 839
BslI CCNNNNNNNGG 2 cut(s) 257, 616
BsmFI GGGAC 5 cut(s) 287, 399, 410, 542, 839
BsnI GGCC 3 cut(s) 174, 398, 953
Bsp1286I GDGCHC 1 cut(s) 1036
Bsp143I GATC 2 cut(s) 247, 1113
BspACI CCGC 4 cut(s) 287, 392, 395, 846
BspANI GGCC 3 cut(s) 174, 398, 953
BspCNI CTCAG 2 cut(s) 148, 492
BspFNI CGCG 2 cut(s) 222, 912
BspPI GGATC 1 cut(s) 242
BsrDI GCAATG 2 cut(s) 215, 318
BsrFI RCCGGY 2 cut(s) 953, 1067
BsrI ACTGG 1 cut(s) 411
BssAI RCCGGY 2 cut(s) 953, 1067
BssECI CCNNGG 2 cut(s) 351, 576
BssMI GATC 2 cut(s) 247, 1113
BssT1I CCWWGG 1 cut(s) 576
Bst2UI CCWGG 1 cut(s) 611
Bst4CI ACNGT 1 cut(s) 736
BstDEI CTNAG 4 cut(s) 135, 500, 553, 922
BstENI CCTNNNNNAGG 1 cut(s) 614
BstFNI CGCG 2 cut(s) 222, 912
BstHHI GCGC 1 cut(s) 914
BstKTI GATC 2 cut(s) 250, 1116
BstMBI GATC 2 cut(s) 247, 1113
BstMWI GCNNNNNNNGC 2 cut(s) 284, 918
BstNI CCWGG 1 cut(s) 611
BstNSI RCATGY 1 cut(s) 287
BstSCI CCNGG 4 cut(s) 169, 350, 609, 638
BstSFI CTRYAG 1 cut(s) 795
BstUI CGCG 2 cut(s) 222, 912
BstV1I GCAGC 2 cut(s) 192, 477
BstX2I RGATCY 1 cut(s) 247
BstXI CCANNNNNNTGG 1 cut(s) 567
BstYI RGATCY 1 cut(s) 247
BsuI GTATCC 2 cut(s) 133, 358
BsuRI GGCC 3 cut(s) 174, 398, 953
BtsI GCAGTG 1 cut(s) 857
BtsIMutI CAGTG 3 cut(s) 404, 741, 857
CfoI GCGC 1 cut(s) 914
Cfr10I RCCGGY 2 cut(s) 953, 1067
Cfr13I GGNCC 3 cut(s) 172, 409, 1040
CseI GACGC 1 cut(s) 114
CsiI ACCWGGT 1 cut(s) 609
Csp6I GTAC 2 cut(s) 132, 881
CspAI ACCGGT 1 cut(s) 1067
CviAII CATG 4 cut(s) 146, 284, 487, 815
CviQI GTAC 2 cut(s) 132, 881
DdeI CTNAG 4 cut(s) 135, 500, 553, 922
DpnI GATC 2 cut(s) 249, 1115
DpnII GATC 2 cut(s) 247, 1113
EaeI YGGCCR 1 cut(s) 951
Eco130I CCWWGG 1 cut(s) 576
Eco24I GRGCYC 1 cut(s) 1036
Eco47I GGWCC 2 cut(s) 409, 1040
Eco57I CTGAAG 1 cut(s) 692
EcoNI CCTNNNNNAGG 1 cut(s) 614
EcoRII CCWGG 1 cut(s) 609
EcoT14I CCWWGG 1 cut(s) 576
EcoT22I ATGCAT 1 cut(s) 444
EcoT38I GRGCYC 1 cut(s) 1036
ErhI CCWWGG 1 cut(s) 576
FaeI CATG 4 cut(s) 149, 287, 490, 818
FaqI GGGAC 5 cut(s) 287, 399, 410, 542, 839
FatI CATG 4 cut(s) 145, 283, 486, 814
FauI CCCGC 1 cut(s) 853
Fnu4HI GCNGC 4 cut(s) 206, 393, 396, 491
FriOI GRGCYC 1 cut(s) 1036
Fsp4HI GCNGC 4 cut(s) 206, 393, 396, 491
FspBI CTAG 1 cut(s) 114
GlaI GCGC 1 cut(s) 913
GluI GCNGC 4 cut(s) 206, 393, 396, 491
HaeIII GGCC 3 cut(s) 174, 398, 953
HapII CCGG 6 cut(s) 129, 170, 351, 639, 954, 1068
HgaI GACGC 1 cut(s) 114
HhaI GCGC 1 cut(s) 914
Hin1II CATG 4 cut(s) 149, 287, 490, 818
Hin6I GCGC 1 cut(s) 912
HinP1I GCGC 1 cut(s) 912
HindIII AAGCTT 3 cut(s) 276, 919, 1098
HinfI GANTC 5 cut(s) 9, 94, 433, 520, 852
HpaII CCGG 6 cut(s) 129, 170, 351, 639, 954, 1068
Hpy188I TCNGA 4 cut(s) 375, 449, 501, 519
Hpy188III TCNNGA 4 cut(s) 137, 251, 365, 1073
Hpy99I CGWCG 1 cut(s) 9
HpyCH4III ACNGT 1 cut(s) 736
HpyCH4IV ACGT 1 cut(s) 931
HpyCH4V TGCA 6 cut(s) 102, 208, 313, 442, 669, 1061
HpyF10VI GCNNNNNNNGC 2 cut(s) 284, 918
HpyF3I CTNAG 4 cut(s) 135, 500, 553, 922
HpySE526I ACGT 1 cut(s) 931
Hsp92II CATG 4 cut(s) 149, 287, 490, 818
HspAI GCGC 1 cut(s) 912
Kzo9I GATC 2 cut(s) 247, 1113
Lsp1109I GCAGC 2 cut(s) 192, 477
LweI GCATC 2 cut(s) 678, 1129
MabI ACCWGGT 1 cut(s) 609
MaeI CTAG 1 cut(s) 114
MaeII ACGT 1 cut(s) 931
MaeIII GTNAC 3 cut(s) 529, 676, 736
MalI GATC 2 cut(s) 249, 1115
MboI GATC 2 cut(s) 247, 1113
MboII GAAGA 2 cut(s) 54, 698
MflI RGATCY 1 cut(s) 247
MhlI GDGCHC 1 cut(s) 1036
MluCI AATT 4 cut(s) 37, 413, 894, 1076
MlyI GAGTC 2 cut(s) 103, 861
MnlI CCTC 5 cut(s) 154, 226, 409, 536, 539
Mph1103I ATGCAT 1 cut(s) 444
MroXI GAANNNNTTC 1 cut(s) 360
MseI TTAA 9 cut(s) 36, 177, 239, 332, 917, 977, 1064, 1118, 1156
MspI CCGG 6 cut(s) 129, 170, 351, 639, 954, 1068
MspR9I CCNGG 4 cut(s) 171, 352, 611, 640
MvaI CCWGG 1 cut(s) 611
MvnI CGCG 2 cut(s) 222, 912
MwoI GCNNNNNNNGC 2 cut(s) 284, 918
NciI CCSGG 3 cut(s) 171, 352, 640
NdeII GATC 2 cut(s) 247, 1113
NlaIII CATG 4 cut(s) 149, 287, 490, 818
NmuCI GTSAC 2 cut(s) 676, 736
NsiI ATGCAT 1 cut(s) 444
NspI RCATGY 1 cut(s) 287
PdmI GAANNNNTTC 1 cut(s) 360
PfeI GAWTC 3 cut(s) 9, 433, 520
PflFI GACNNNGTC 1 cut(s) 299
PfoI TCCNGGA 1 cut(s) 638
PinAI ACCGGT 1 cut(s) 1067
PkrI GCNGC 4 cut(s) 207, 394, 397, 492
PleI GAGTC 2 cut(s) 102, 860
PpsI GAGTC 2 cut(s) 102, 860
Psp6I CCWGG 1 cut(s) 609
PspGI CCWGG 1 cut(s) 609
PspPI GGNCC 3 cut(s) 172, 409, 1040
PsuI RGATCY 1 cut(s) 247
PsyI GACNNNGTC 1 cut(s) 299
RsaI GTAC 2 cut(s) 133, 882
RsaNI GTAC 2 cut(s) 132, 881
SaqAI TTAA 9 cut(s) 36, 177, 239, 332, 917, 977, 1064, 1118, 1156
SatI GCNGC 4 cut(s) 206, 393, 396, 491
Sau3AI GATC 2 cut(s) 247, 1113
Sau96I GGNCC 3 cut(s) 172, 409, 1040
ScaI AGTACT 1 cut(s) 882
SchI GAGTC 2 cut(s) 103, 861
ScrFI CCNGG 4 cut(s) 171, 352, 611, 640
SduI GDGCHC 1 cut(s) 1036
SexAI ACCWGGT 1 cut(s) 609
SfaNI GCATC 2 cut(s) 678, 1129
SfcI CTRYAG 1 cut(s) 795
SinI GGWCC 2 cut(s) 409, 1040
SmlI CTYRAG 1 cut(s) 887
SmoI CTYRAG 1 cut(s) 887
Sse9I AATT 4 cut(s) 37, 413, 894, 1076
SsiI CCGC 4 cut(s) 287, 392, 395, 846
SspMI CTAG 1 cut(s) 114
StyD4I CCNGG 4 cut(s) 169, 350, 609, 638
StyI CCWWGG 1 cut(s) 576
TaaI ACNGT 1 cut(s) 736
TaiI ACGT 1 cut(s) 934
TaqI TCGA 1 cut(s) 776
TasI AATT 4 cut(s) 37, 413, 894, 1076
TatI WGTACW 1 cut(s) 880
TauI GCSGC 2 cut(s) 395, 398
TfiI GAWTC 3 cut(s) 9, 433, 520
Tru1I TTAA 9 cut(s) 36, 177, 239, 332, 917, 977, 1064, 1118, 1156
Tru9I TTAA 9 cut(s) 36, 177, 239, 332, 917, 977, 1064, 1118, 1156
TscAI CASTG 3 cut(s) 411, 741, 864
TseFI GTSAC 2 cut(s) 676, 736
TseI GCWGC 2 cut(s) 205, 490
Tsp45I GTSAC 2 cut(s) 676, 736
TspDTI ATGAA 5 cut(s) 39, 475, 512, 812, 1022
TspGWI ACGGA 1 cut(s) 357
TspRI CASTG 3 cut(s) 411, 741, 864
Tth111I GACNNNGTC 1 cut(s) 299
VpaK11BI GGWCC 2 cut(s) 409, 1040
XagI CCTNNNNNAGG 1 cut(s) 614
XceI RCATGY 1 cut(s) 287
XmnI GAANNNNTTC 1 cut(s) 360
XspI CTAG 1 cut(s) 114
ZrmI AGTACT 1 cut(s) 882
Zsp2I ATGCAT 1 cut(s) 444
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.