DNA-directed DNA polymerase activity
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G07741 ATMG00410 ATMG01170 |
| malus_domestica | MD15G1429600.v1.1 |
| pyrus_communis | pycom461g00070 |
| rosa_chinensis | RchiOBHm_Chr6g0256721 RchiOBHm_Chr7g0231141 RchiOBHm_MTg0498771 |
| rosa_laevigata | RLG00000000437 RLG00000000472 RLG00000000497 RLG00000018733 |
| rosa_roxburghii | Rroxscaffold_2G00119300 |
| rosa_samantha | Rh2BG168400 Rh2DG167300 Rh6AG048600 |
| rosa_wichuraiana | Rw7G034610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 5 cut(s) | 908, 1356, 1632, 2178, 2457 |
| AccB1I | GGYRCC | 1 cut(s) | 2420 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 62, 1920, 1950 |
| AccI | GTMKAC | 2 cut(s) | 52, 819 |
| AciI | CCGC | 3 cut(s) | 476, 1973, 2424 |
| AclI | AACGTT | 1 cut(s) | 775 |
| AclWI | GGATC | 5 cut(s) | 473, 486, 1055, 1934, 1947 |
| AcsI | RAATTY | 5 cut(s) | 410, 1577, 1811, 2100, 2387 |
| AcuI | CTGAAG | 1 cut(s) | 2480 |
| AfaI | GTAC | 8 cut(s) | 507, 627, 703, 890, 1555, 2021, 2264, 2374 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 62, 227, 970, 1034, 1418, 1649, 1920, 1950 |
| AflII | CTTAAG | 2 cut(s) | 103, 2582 |
| AhlI | ACTAGT | 1 cut(s) | 395 |
| AjnI | CCWGG | 3 cut(s) | 61, 1013, 1417 |
| AluBI | AGCT | 9 cut(s) | 137, 403, 445, 782, 955, 1008, 1692, 1991, 2531 |
| AluI | AGCT | 9 cut(s) | 137, 403, 445, 782, 955, 1008, 1692, 1991, 2531 |
| Alw21I | GWGCWC | 2 cut(s) | 2008, 2086 |
| Alw26I | GTCTC | 4 cut(s) | 543, 593, 1078, 1948 |
| AlwI | GGATC | 5 cut(s) | 473, 486, 1055, 1934, 1947 |
| AoxI | GGCC | 1 cut(s) | 2220 |
| ApeKI | GCWGC | 4 cut(s) | 955, 1677, 1985, 1988 |
| ApoI | RAATTY | 5 cut(s) | 410, 1577, 1811, 2100, 2387 |
| AseI | ATTAAT | 1 cut(s) | 83 |
| AspA2I | CCTAGG | 1 cut(s) | 2362 |
| AspLEI | GCGC | 1 cut(s) | 164 |
| AspS9I | GGNCC | 1 cut(s) | 2220 |
| AsuC2I | CCSGG | 2 cut(s) | 1869, 2634 |
| AsuHPI | GGTGA | 4 cut(s) | 242, 290, 1156, 1586 |
| AsuII | TTCGAA | 2 cut(s) | 370, 1839 |
| AvrII | CCTAGG | 1 cut(s) | 2362 |
| BaeGI | GKGCMC | 1 cut(s) | 2423 |
| BamHI | GGATCC | 2 cut(s) | 478, 1939 |
| BanI | GGYRCC | 1 cut(s) | 2420 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 944, 976 |
| BauI | CACGAG | 1 cut(s) | 2034 |
| BbsI | GAAGAC | 5 cut(s) | 1299, 1723, 2046, 2149, 2486 |
| Bbv12I | GWGCWC | 2 cut(s) | 2008, 2086 |
| BbvI | GCAGC | 4 cut(s) | 942, 1689, 1972, 2000 |
| BccI | CCATC | 8 cut(s) | 229, 427, 676, 839, 972, 1730, 2189, 2342 |
| BciT130I | CCWGG | 3 cut(s) | 63, 1015, 1419 |
| BciVI | GTATCC | 1 cut(s) | 1398 |
| BcnI | CCSGG | 2 cut(s) | 1869, 2634 |
| BcoDI | GTCTC | 4 cut(s) | 543, 593, 1078, 1948 |
| BcuI | ACTAGT | 1 cut(s) | 395 |
| BfaI | CTAG | 8 cut(s) | 396, 558, 608, 1281, 1518, 2277, 2363, 2574 |
| BfmI | CTRYAG | 3 cut(s) | 483, 1986, 2430 |
| BfrI | CTTAAG | 2 cut(s) | 103, 2582 |
| BfuI | GTATCC | 1 cut(s) | 1398 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1435 |
| BglII | AGATCT | 2 cut(s) | 1827, 2291 |
| BisI | GCNGC | 4 cut(s) | 956, 1678, 1986, 1989 |
| BlnI | CCTAGG | 1 cut(s) | 2362 |
| BlpI | GCTNAGC | 1 cut(s) | 1009 |
| BlsI | GCNGC | 4 cut(s) | 957, 1679, 1987, 1990 |
| BmcAI | AGTACT | 2 cut(s) | 703, 2374 |
| Bme1390I | CCNGG | 5 cut(s) | 63, 1015, 1419, 1869, 2634 |
| BmgT120I | GGNCC | 1 cut(s) | 2220 |
| BmiI | GGNNCC | 4 cut(s) | 480, 1941, 2221, 2422 |
| BmrFI | CCNGG | 5 cut(s) | 63, 1015, 1419, 1869, 2634 |
| BmsI | GCATC | 7 cut(s) | 334, 463, 655, 1027, 1137, 1324, 1735 |
| BpiI | GAAGAC | 5 cut(s) | 1299, 1723, 2046, 2149, 2486 |
| BpmI | CTGGAG | 1 cut(s) | 1972 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1009 |
| Bpu14I | TTCGAA | 2 cut(s) | 370, 1839 |
| BpuEI | CTTGAG | 1 cut(s) | 1143 |
| BpuMI | CCSGG | 2 cut(s) | 1869, 2634 |
| BsaBI | GATNNNNATC | 1 cut(s) | 477 |
| BsaI | GGTCTC | 1 cut(s) | 1948 |
| BsaJI | CCNNGG | 4 cut(s) | 62, 1961, 2139, 2362 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 62, 227, 970, 1034, 1418, 1649, 1920, 1950 |
| Bse118I | RCCGGY | 1 cut(s) | 1946 |
| Bse1I | ACTGG | 4 cut(s) | 290, 1268, 1576, 1925 |
| Bse8I | GATNNNNATC | 1 cut(s) | 477 |
| BseBI | CCWGG | 3 cut(s) | 63, 1015, 1419 |
| BseDI | CCNNGG | 4 cut(s) | 62, 1961, 2139, 2362 |
| BseGI | GGATG | 3 cut(s) | 58, 220, 2506 |
| BseJI | GATNNNNATC | 1 cut(s) | 477 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 62, 227, 970, 1034, 1418, 1649, 1920, 1950 |
| BseMII | CTCAG | 4 cut(s) | 1240, 1662, 1815, 1926 |
| BseNI | ACTGG | 4 cut(s) | 290, 1268, 1576, 1925 |
| BseRI | GAGGAG | 1 cut(s) | 1497 |
| BseSI | GKGCMC | 1 cut(s) | 2423 |
| BseXI | GCAGC | 4 cut(s) | 942, 1689, 1972, 2000 |
| BshFI | GGCC | 1 cut(s) | 2222 |
| BshNI | GGYRCC | 1 cut(s) | 2420 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2008, 2086 |
| BsiSI | CCGG | 3 cut(s) | 1869, 1947, 2634 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 62, 227, 970, 1034, 1418, 1649, 1920, 1950 |
| BsmAI | GTCTC | 4 cut(s) | 543, 593, 1078, 1948 |
| BsmI | GAATGC | 2 cut(s) | 990, 1178 |
| BsnI | GGCC | 1 cut(s) | 2222 |
| Bso31I | GGTCTC | 1 cut(s) | 1948 |
| Bsp119I | TTCGAA | 2 cut(s) | 370, 1839 |
| Bsp1286I | GDGCHC | 3 cut(s) | 2008, 2086, 2423 |
| Bsp1407I | TGTACA | 1 cut(s) | 2019 |
| Bsp143I | GATC | 7 cut(s) | 121, 478, 1047, 1635, 1827, 1939, 2291 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1009 |
| BspACI | CCGC | 3 cut(s) | 476, 1973, 2424 |
| BspANI | GGCC | 1 cut(s) | 2222 |
| BspCNI | CTCAG | 4 cut(s) | 1239, 1661, 1816, 1927 |
| BspLI | GGNNCC | 4 cut(s) | 480, 1941, 2221, 2422 |
| BspMAI | CTGCAG | 1 cut(s) | 1990 |
| BspPI | GGATC | 5 cut(s) | 473, 486, 1055, 1934, 1947 |
| BspQI | GCTCTTC | 1 cut(s) | 2091 |
| BspT104I | TTCGAA | 2 cut(s) | 370, 1839 |
| BspT107I | GGYRCC | 1 cut(s) | 2420 |
| BspTI | CTTAAG | 2 cut(s) | 103, 2582 |
| BspTNI | GGTCTC | 1 cut(s) | 1948 |
| BsrFI | RCCGGY | 1 cut(s) | 1946 |
| BsrGI | TGTACA | 1 cut(s) | 2019 |
| BsrI | ACTGG | 4 cut(s) | 290, 1268, 1576, 1925 |
| BssAI | RCCGGY | 1 cut(s) | 1946 |
| BssECI | CCNNGG | 4 cut(s) | 62, 1961, 2139, 2362 |
| BssMI | GATC | 7 cut(s) | 121, 478, 1047, 1635, 1827, 1939, 2291 |
| BssSI | CACGAG | 1 cut(s) | 2034 |
| BssT1I | CCWWGG | 3 cut(s) | 1961, 2139, 2362 |
| Bst2BI | CACGAG | 1 cut(s) | 2034 |
| Bst2UI | CCWGG | 3 cut(s) | 63, 1015, 1419 |
| Bst4CI | ACNGT | 9 cut(s) | 188, 573, 604, 701, 817, 895, 937, 2045, 2262 |
| Bst6I | CTCTTC | 3 cut(s) | 1596, 2088, 2091 |
| BstAFI | CTTAAG | 2 cut(s) | 103, 2582 |
| BstAUI | TGTACA | 1 cut(s) | 2019 |
| BstBI | TTCGAA | 2 cut(s) | 370, 1839 |
| BstC8I | GCNNGC | 1 cut(s) | 1618 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1032, 1647 |
| BstF5I | GGATG | 3 cut(s) | 58, 220, 2506 |
| BstHHI | GCGC | 1 cut(s) | 164 |
| BstKTI | GATC | 7 cut(s) | 124, 481, 1050, 1638, 1830, 1942, 2294 |
| BstMAI | GTCTC | 4 cut(s) | 543, 593, 1078, 1948 |
| BstMBI | GATC | 7 cut(s) | 121, 478, 1047, 1635, 1827, 1939, 2291 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1435, 1997 |
| BstNI | CCWGG | 3 cut(s) | 63, 1015, 1419 |
| BstSCI | CCNGG | 5 cut(s) | 61, 1013, 1417, 1867, 2632 |
| BstSFI | CTRYAG | 3 cut(s) | 483, 1986, 2430 |
| BstSLI | GKGCMC | 1 cut(s) | 2423 |
| BstV1I | GCAGC | 4 cut(s) | 942, 1689, 1972, 2000 |
| BstV2I | GAAGAC | 5 cut(s) | 1299, 1723, 2046, 2149, 2486 |
| BstX2I | RGATCY | 4 cut(s) | 478, 1827, 1939, 2291 |
| BstYI | RGATCY | 4 cut(s) | 478, 1827, 1939, 2291 |
| BsuI | GTATCC | 1 cut(s) | 1398 |
| BsuRI | GGCC | 1 cut(s) | 2222 |
| BtgZI | GCGATG | 2 cut(s) | 678, 1763 |
| BtsCI | GGATG | 3 cut(s) | 58, 220, 2506 |
| BtsIMutI | CAGTG | 2 cut(s) | 122, 1821 |
| Cac8I | GCNNGC | 1 cut(s) | 1618 |
| CfoI | GCGC | 1 cut(s) | 164 |
| Cfr10I | RCCGGY | 1 cut(s) | 1946 |
| Cfr13I | GGNCC | 1 cut(s) | 2220 |
| CseI | GACGC | 1 cut(s) | 1249 |
| Csp6I | GTAC | 8 cut(s) | 506, 626, 702, 889, 1554, 2020, 2263, 2373 |
| CviAII | CATG | 6 cut(s) | 449, 623, 646, 1328, 1439, 1876 |
| CviQI | GTAC | 8 cut(s) | 506, 626, 702, 889, 1554, 2020, 2263, 2373 |
| DpnI | GATC | 7 cut(s) | 123, 480, 1049, 1637, 1829, 1941, 2293 |
| DpnII | GATC | 7 cut(s) | 121, 478, 1047, 1635, 1827, 1939, 2291 |
| DraI | TTTAAA | 1 cut(s) | 2559 |
| Eam1104I | CTCTTC | 3 cut(s) | 1596, 2088, 2091 |
| EarI | CTCTTC | 3 cut(s) | 1596, 2088, 2091 |
| Eco130I | CCWWGG | 3 cut(s) | 1961, 2139, 2362 |
| Eco31I | GGTCTC | 1 cut(s) | 1948 |
| Eco32I | GATATC | 2 cut(s) | 530, 1968 |
| Eco57I | CTGAAG | 1 cut(s) | 2480 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1032, 1647 |
| EcoRI | GAATTC | 1 cut(s) | 1577 |
| EcoRII | CCWGG | 3 cut(s) | 61, 1013, 1417 |
| EcoRV | GATATC | 2 cut(s) | 530, 1968 |
| EcoT14I | CCWWGG | 3 cut(s) | 1961, 2139, 2362 |
| EcoT22I | ATGCAT | 1 cut(s) | 1339 |
| ErhI | CCWWGG | 3 cut(s) | 1961, 2139, 2362 |
| FaeI | CATG | 6 cut(s) | 452, 626, 649, 1331, 1442, 1879 |
| FatI | CATG | 6 cut(s) | 448, 622, 645, 1327, 1438, 1875 |
| FauNDI | CATATG | 1 cut(s) | 1492 |
| FblI | GTMKAC | 2 cut(s) | 52, 819 |
| Fnu4HI | GCNGC | 4 cut(s) | 956, 1678, 1986, 1989 |
| FokI | GGATG | 3 cut(s) | 45, 227, 2513 |
| Fsp4HI | GCNGC | 4 cut(s) | 956, 1678, 1986, 1989 |
| FspBI | CTAG | 8 cut(s) | 396, 558, 608, 1281, 1518, 2277, 2363, 2574 |
| GlaI | GCGC | 1 cut(s) | 163 |
| GluI | GCNGC | 4 cut(s) | 956, 1678, 1986, 1989 |
| GsuI | CTGGAG | 1 cut(s) | 1972 |
| HaeIII | GGCC | 1 cut(s) | 2222 |
| HapII | CCGG | 3 cut(s) | 1869, 1947, 2634 |
| HgaI | GACGC | 1 cut(s) | 1249 |
| HhaI | GCGC | 1 cut(s) | 164 |
| Hin1II | CATG | 6 cut(s) | 452, 626, 649, 1331, 1442, 1879 |
| Hin6I | GCGC | 1 cut(s) | 162 |
| HinP1I | GCGC | 1 cut(s) | 162 |
| HincII | GTYRAC | 2 cut(s) | 439, 1378 |
| HindII | GTYRAC | 2 cut(s) | 439, 1378 |
| HindIII | AAGCTT | 1 cut(s) | 1690 |
| HpaI | GTTAAC | 2 cut(s) | 439, 1378 |
| HpaII | CCGG | 3 cut(s) | 1869, 1947, 2634 |
| HphI | GGTGA | 4 cut(s) | 242, 290, 1156, 1586 |
| Hpy166II | GTNNAC | 6 cut(s) | 53, 195, 439, 820, 891, 1378 |
| Hpy188I | TCNGA | 5 cut(s) | 126, 1070, 2312, 2452, 2605 |
| Hpy8I | GTNNAC | 6 cut(s) | 53, 195, 439, 820, 891, 1378 |
| Hpy99I | CGWCG | 2 cut(s) | 506, 1311 |
| HpyAV | CCTTC | 3 cut(s) | 813, 1445, 1543 |
| HpyCH4III | ACNGT | 9 cut(s) | 188, 573, 604, 701, 817, 895, 937, 2045, 2262 |
| HpyCH4IV | ACGT | 2 cut(s) | 37, 775 |
| HpyCH4V | TGCA | 5 cut(s) | 48, 145, 1337, 1616, 1988 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1435, 1997 |
| HpySE526I | ACGT | 2 cut(s) | 37, 775 |
| Hsp92II | CATG | 6 cut(s) | 452, 626, 649, 1331, 1442, 1879 |
| HspAI | GCGC | 1 cut(s) | 162 |
| KspAI | GTTAAC | 2 cut(s) | 439, 1378 |
| Kzo9I | GATC | 7 cut(s) | 121, 478, 1047, 1635, 1827, 1939, 2291 |
| LguI | GCTCTTC | 1 cut(s) | 2091 |
| LmnI | GCTCC | 2 cut(s) | 450, 993 |
| Lsp1109I | GCAGC | 4 cut(s) | 942, 1689, 1972, 2000 |
| LweI | GCATC | 7 cut(s) | 334, 463, 655, 1027, 1137, 1324, 1735 |
| MaeI | CTAG | 8 cut(s) | 396, 558, 608, 1281, 1518, 2277, 2363, 2574 |
| MaeII | ACGT | 2 cut(s) | 37, 775 |
| MaeIII | GTNAC | 8 cut(s) | 1195, 1313, 1652, 1696, 2045, 2236, 2469, 2562 |
| MalI | GATC | 7 cut(s) | 123, 480, 1049, 1637, 1829, 1941, 2293 |
| MboI | GATC | 7 cut(s) | 121, 478, 1047, 1635, 1827, 1939, 2291 |
| MfeI | CAATTG | 1 cut(s) | 1979 |
| MflI | RGATCY | 4 cut(s) | 478, 1827, 1939, 2291 |
| MhlI | GDGCHC | 3 cut(s) | 2008, 2086, 2423 |
| MlyI | GAGTC | 4 cut(s) | 532, 1080, 2057, 2144 |
| MmeI | TCCRAC | 3 cut(s) | 1564, 2112, 2628 |
| Mph1103I | ATGCAT | 1 cut(s) | 1339 |
| MslI | CAYNNNNRTG | 3 cut(s) | 650, 1332, 1368 |
| MspCI | CTTAAG | 2 cut(s) | 103, 2582 |
| MspI | CCGG | 3 cut(s) | 1869, 1947, 2634 |
| MspR9I | CCNGG | 5 cut(s) | 63, 1015, 1419, 1869, 2634 |
| MunI | CAATTG | 1 cut(s) | 1979 |
| Mva1269I | GAATGC | 2 cut(s) | 990, 1178 |
| MvaI | CCWGG | 3 cut(s) | 63, 1015, 1419 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1435, 1997 |
| NciI | CCSGG | 2 cut(s) | 1869, 2634 |
| NdeI | CATATG | 1 cut(s) | 1492 |
| NdeII | GATC | 7 cut(s) | 121, 478, 1047, 1635, 1827, 1939, 2291 |
| NlaIII | CATG | 6 cut(s) | 452, 626, 649, 1331, 1442, 1879 |
| NlaIV | GGNNCC | 4 cut(s) | 480, 1941, 2221, 2422 |
| NmuCI | GTSAC | 3 cut(s) | 1195, 2236, 2562 |
| NsiI | ATGCAT | 1 cut(s) | 1339 |
| NspV | TTCGAA | 2 cut(s) | 370, 1839 |
| PciSI | GCTCTTC | 1 cut(s) | 2091 |
| PctI | GAATGC | 2 cut(s) | 990, 1178 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 62, 1920, 1950 |
| PkrI | GCNGC | 4 cut(s) | 957, 1679, 1987, 1990 |
| PleI | GAGTC | 4 cut(s) | 531, 1079, 2057, 2143 |
| PpsI | GAGTC | 4 cut(s) | 531, 1079, 2057, 2143 |
| PshBI | ATTAAT | 1 cut(s) | 83 |
| PsiI | TTATAA | 5 cut(s) | 908, 1356, 1632, 2178, 2457 |
| Psp1406I | AACGTT | 1 cut(s) | 775 |
| Psp6I | CCWGG | 3 cut(s) | 61, 1013, 1417 |
| PspGI | CCWGG | 3 cut(s) | 61, 1013, 1417 |
| PspN4I | GGNNCC | 4 cut(s) | 480, 1941, 2221, 2422 |
| PspPI | GGNCC | 1 cut(s) | 2220 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 603, 635 |
| PstI | CTGCAG | 1 cut(s) | 1990 |
| PsuI | RGATCY | 4 cut(s) | 478, 1827, 1939, 2291 |
| RsaI | GTAC | 8 cut(s) | 507, 627, 703, 890, 1555, 2021, 2264, 2374 |
| RsaNI | GTAC | 8 cut(s) | 506, 626, 702, 889, 1554, 2020, 2263, 2373 |
| RseI | CAYNNNNRTG | 3 cut(s) | 650, 1332, 1368 |
| SapI | GCTCTTC | 1 cut(s) | 2091 |
| SatI | GCNGC | 4 cut(s) | 956, 1678, 1986, 1989 |
| Sau3AI | GATC | 7 cut(s) | 121, 478, 1047, 1635, 1827, 1939, 2291 |
| Sau96I | GGNCC | 1 cut(s) | 2220 |
| ScaI | AGTACT | 2 cut(s) | 703, 2374 |
| SchI | GAGTC | 4 cut(s) | 532, 1080, 2057, 2144 |
| ScrFI | CCNGG | 5 cut(s) | 63, 1015, 1419, 1869, 2634 |
| SduI | GDGCHC | 3 cut(s) | 2008, 2086, 2423 |
| SfaNI | GCATC | 7 cut(s) | 334, 463, 655, 1027, 1137, 1324, 1735 |
| SfcI | CTRYAG | 3 cut(s) | 483, 1986, 2430 |
| SfuI | TTCGAA | 2 cut(s) | 370, 1839 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 650, 1332, 1368 |
| SmlI | CTYRAG | 3 cut(s) | 103, 1158, 2582 |
| SmoI | CTYRAG | 3 cut(s) | 103, 1158, 2582 |
| SpeI | ACTAGT | 1 cut(s) | 395 |
| SsiI | CCGC | 3 cut(s) | 476, 1973, 2424 |
| SspI | AATATT | 1 cut(s) | 866 |
| SspMI | CTAG | 8 cut(s) | 396, 558, 608, 1281, 1518, 2277, 2363, 2574 |
| StyD4I | CCNGG | 5 cut(s) | 61, 1013, 1417, 1867, 2632 |
| StyI | CCWWGG | 3 cut(s) | 1961, 2139, 2362 |
| TaaI | ACNGT | 9 cut(s) | 188, 573, 604, 701, 817, 895, 937, 2045, 2262 |
| TaiI | ACGT | 2 cut(s) | 40, 778 |
| TaqI | TCGA | 7 cut(s) | 33, 268, 370, 526, 762, 843, 1839 |
| TatI | WGTACW | 4 cut(s) | 701, 888, 2019, 2372 |
| TscAI | CASTG | 2 cut(s) | 122, 1828 |
| TseFI | GTSAC | 3 cut(s) | 1195, 2236, 2562 |
| TseI | GCWGC | 4 cut(s) | 955, 1677, 1985, 1988 |
| Tsp45I | GTSAC | 3 cut(s) | 1195, 2236, 2562 |
| TspGWI | ACGGA | 1 cut(s) | 611 |
| TspRI | CASTG | 2 cut(s) | 122, 1828 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 62, 1920, 1950 |
| Vha464I | CTTAAG | 2 cut(s) | 103, 2582 |
| VspI | ATTAAT | 1 cut(s) | 83 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1032, 1647 |
| XapI | RAATTY | 5 cut(s) | 410, 1577, 1811, 2100, 2387 |
| XbaI | TCTAGA | 1 cut(s) | 2276 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2230 |
| XmaJI | CCTAGG | 1 cut(s) | 2362 |
| XmiI | GTMKAC | 2 cut(s) | 52, 819 |
| XspI | CTAG | 8 cut(s) | 396, 558, 608, 1281, 1518, 2277, 2363, 2574 |
| ZrmI | AGTACT | 2 cut(s) | 703, 2374 |
| Zsp2I | ATGCAT | 1 cut(s) | 1339 |