Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007651

Physical Location & Seq

Genomic Coordinates Reverse (-)

7342607 .. 7347464

Gene Structure 4858 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G16940.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

ATGGACTTTGATGAGTATGAGTACTTAGAGAAGACAGTTGAAAATCCTCACCTGGAGAATGAAGTTGGTAATGGTGGTGGTGATGAGAAAGTCAAATCTGAAGGGAAAGAGAGGAGTAGGAGCTCAAGGCATAGGGGTGACAAGAAGAAGGAGAGGGATGAAGATGAGGATGGTCGGCGTTCTAAGCGGTCGAGATCGCATCACCGTTCACGTTCTAGGGACAGAGAGAGGGATAGGCATAGAAGTAGCAGGGAGCACAGAGATAGAGATCGTGAAAAGGATGTAGATAAAGAAGAAAGAAATGGGAAAGATAGAGAGAGGGACAGAGATAAGGATCGAGACAGTAAAGGGCGTGACCATGAAAAAGATCGGTCACGAAGAAGTAGAAGTCGATCAGAGCGACATCGGAGTCAGGAAAGAGAAAAGAGCTTGGAAATAGAACCTAAGGAAAGAGAGACCAAGGACCGGGATAGAGATCGCAGACGCCATAAAGATAAGAAGGAGGATAAGGTAGAGCCTGAGGCTGATCCTGAAAGAGATCAGAGAACAGTTTTTGCATATCAGATTGCTTTGAGGGCAACTGAAAGGGATGTATATGAGTTCTTTTCCAGAGCTGGAAAGGTGCGAGATGTACGGATAATAATGGATCGAATTTCCAGGCGTTCCAGAGGAATAGGGTATGTGGAGTTTTATGATACAATGTCTGTCCCTATGGCTATTGCTCTATCTGGACAACCTCTTCTTGGTCAGCCTGTTATGGTAAAACCTTCTGAAGCTGAGAAGAATCTTGTTCAGTCAACAACTGCTGCTGCTGGAGCAGGGGGGATGTTGGGCCCCTACTCCGGGGGAGCTAGGCGTCTTTATGTTGGTAACCTCCACATTAACATGTCAGAAGATGATTTGCGAAAGGTATTTGAATCATTTGGGAGTGTGGAGCTGGTGCAAGTACCTCGTGATGAAACTGGTCTCTGCAAAGGATTTGGTTTTGTTCAGTTTGCCCGGCTGGAGGATGCTAGAAACGCACTGAATCTAAATGGGCAGTTGGAAATTGCAGGTCGTGCAATCAAGGTGTCAGCTGTAACTGATCAAACTGAAGTCCCAGAAGCTGGACAGACGCAAACCACCGGTGATTTGGATGATGATGATGGAGGTGGCCTGTCTCTGAATGCACAATCGCGGGCGCTTCTCATGCAAAAGCTCGATCGCAGTGGAACTGCATCGAGCACTGGCCTTACTACAGCTGCATCTTTCAACGGTGGAGTTTCAACAATCTCTTCGTTGGCAGCTCCTGCTCTTGTACAAGGGTCTTTTCCTGCTGTTGCTGGACTCGCAGGGTCCGGCATTATTCCCGGTGTTATACCAGCTGGTTTCGACCCAATTGGTGTCCCCAGCGAATGTCTGCTGCTTAAAAACATGTTTGATCCATCCACAGAGACTGAAGATGATTTTGATGAGGATATAAAAGAAGATGTTAAAGAAGAATGCTCCAAATTCGGAAAACTGAATCATATCTTTGTTGACAAGAACAGCGTTGGTTTTGTCTACCTGAGATTTGAGAATGCGCAAGCAGCCATAGGTGCACAACGTGCTCTCCATGGAAGATGGTTTGCTGGAAAGATGATTACTGCGACTTACATGACTACAGAGGCTTACGAGGCCAAATTCCCCGAGAGTAAGGTCGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0016604 GO:0016607 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RBM39linker RRM_1

Protein Analysis

561

Amino Acids

63.1

Weight (kDa)

6.39

Isoelectric Point (pI)

55.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	51 - 110	1.3e-09	RNA recognition motif
RRM_1	PF00076	146 - 215	1.4e-19	RNA recognition motif
RBM39linker	PF15519	237 - 342	4.6e-19	linker between RRM2 and RRM3 domains in RBM39 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007651)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16940 AT2G16940 AT2G16940 AT2G16940 AT2G16940
fragaria_vesca	FvH4_2g15540
malus_domestica	MD05G1123800.v1.1 MD10G1126500.v1.1
prunus_persica	Prupe.8G167600_v2.0.a1 Prupe.8G167800_v2.0.a1 Prupe.8G167800_v2.0.a1 Prupe.8G167800_v2.0.a1
pyrus_communis	pycom05g11800
rosa_chinensis	RchiOBHm_Chr6g0278711
rosa_laevigata	RLG00000013199
rosa_multiflora	Rmu_sc0000531.1_g000006
rosa_roxburghii	Rroxscaffold_7G00189690 Rroxscaffold_7G00189950
rosa_rugosa	Rorug06G0118400
rosa_samantha	Rh6AG227200 Rh6BG232600 Rh6CG234800 Rh6DG226400
rosa_wichuraiana	Rw6G019930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	408
Acc16I	TGCGCA	1 cut(s)	1563
Acc36I	ACCTGC	1 cut(s)	1043
AccB7I	CCANNNNNTGG	1 cut(s)	1106
AccI	GTMKAC	1 cut(s)	1542
AccII	CGCG	1 cut(s)	1177
AciI	CCGC	2 cut(s)	187, 1177
AclWI	GGATC	4 cut(s)	342, 521, 654, 1415
AcsI	RAATTY	3 cut(s)	651, 1490, 1661
AcuI	CTGAAG	4 cut(s)	120, 792, 1113, 1458
AcyI	GRCGYC	2 cut(s)	484, 856
AdeI	CACNNNGTG	1 cut(s)	1586
AfaI	GTAC	4 cut(s)	23, 633, 948, 1299
AfiI	CCNNNNNNNGG	6 cut(s)	465, 743, 842, 843, 1006, 1106
AflIII	ACRYGT	2 cut(s)	885, 1413
AgeI	ACCGGT	1 cut(s)	1124
AgsI	TTSAA	4 cut(s)	41, 917, 1252, 1266
AjnI	CCWGG	2 cut(s)	51, 656
Alw21I	GWGCWC	5 cut(s)	125, 258, 1226, 1582, 1591
Alw26I	GTCTC	5 cut(s)	333, 449, 971, 1164, 1427
Alw44I	GTGCAC	1 cut(s)	1578
AlwI	GGATC	4 cut(s)	342, 521, 654, 1415
AlwNI	CAGNNNCTG	3 cut(s)	1106, 1289, 1436
Ama87I	CYCGRG	1 cut(s)	1667
AoxI	GGCC	4 cut(s)	832, 1153, 1228, 1656
ApaI	GGGCCC	1 cut(s)	836
ApaLI	GTGCAC	1 cut(s)	1578
ApeKI	GCWGC	6 cut(s)	806, 809, 1241, 1283, 1402, 1568
ApoI	RAATTY	3 cut(s)	651, 1490, 1661
AsiGI	ACCGGT	1 cut(s)	1124
AspLEI	GCGC	2 cut(s)	1183, 1564
AspS9I	GGNCC	4 cut(s)	463, 832, 833, 1335
AsuC2I	CCSGG	4 cut(s)	467, 844, 1000, 1350
AsuHPI	GGTGA	5 cut(s)	41, 92, 149, 194, 1139
AvaI	CYCGRG	1 cut(s)	1667
AvaII	GGWCC	2 cut(s)	463, 1335
AxyI	CCTNAGG	2 cut(s)	444, 519
BaeGI	GKGCMC	2 cut(s)	836, 1582
BanII	GRGCYC	2 cut(s)	125, 836
BauI	CACGAG	1 cut(s)	951
BbsI	GAAGAC	1 cut(s)	38
Bbv12I	GWGCWC	5 cut(s)	125, 258, 1226, 1582, 1591
BbvI	GCAGC	6 cut(s)	793, 796, 1228, 1295, 1389, 1580
BccI	CCATC	4 cut(s)	164, 1139, 1432, 1596
BcgI	CGANNNNNNTGC	2 cut(s)	932, 966
BciT130I	CCWGG	2 cut(s)	53, 658
BclI	TGATCA	1 cut(s)	1084
BcnI	CCSGG	4 cut(s)	467, 844, 1000, 1350
BcoDI	GTCTC	5 cut(s)	333, 449, 971, 1164, 1427
BfaI	CTAG	3 cut(s)	216, 852, 1014
BfmI	CTRYAG	2 cut(s)	1236, 1641
BfoI	RGCGCY	1 cut(s)	1184
BfuAI	ACCTGC	1 cut(s)	1043
BisI	GCNGC	6 cut(s)	807, 810, 1242, 1284, 1403, 1569
BlsI	GCNGC	6 cut(s)	808, 811, 1243, 1285, 1404, 1570
BmcAI	AGTACT	1 cut(s)	23
Bme1390I	CCNGG	6 cut(s)	53, 467, 658, 844, 1000, 1350
Bme18I	GGWCC	2 cut(s)	463, 1335
BmeT110I	CYCGRG	1 cut(s)	1667
BmgT120I	GGNCC	4 cut(s)	463, 832, 833, 1335
BmiI	GGNNCC	3 cut(s)	834, 835, 1336
BmrFI	CCNGG	6 cut(s)	53, 467, 658, 844, 1000, 1350
BmsI	GCATC	4 cut(s)	208, 1000, 1226, 1253
BpiI	GAAGAC	1 cut(s)	38
BpmI	CTGGAG	3 cut(s)	74, 834, 1025
BpuEI	CTTGAG	1 cut(s)	109
BpuMI	CCSGG	4 cut(s)	467, 844, 1000, 1350
BsaBI	GATNNNNATC	3 cut(s)	267, 333, 474
BsaHI	GRCGYC	2 cut(s)	484, 856
BsaI	GGTCTC	2 cut(s)	449, 971
BsaJI	CCNNGG	3 cut(s)	459, 843, 1594
BsaWI	WCCGGW	1 cut(s)	1124
BsaXI	ACNNNNNCTCC	2 cut(s)	1575, 1605
Bsc4I	CCNNNNNNNGG	6 cut(s)	465, 743, 842, 843, 1006, 1106
Bse118I	RCCGGY	1 cut(s)	1124
Bse1I	ACTGG	2 cut(s)	967, 1231
Bse21I	CCTNAGG	2 cut(s)	444, 519
Bse8I	GATNNNNATC	3 cut(s)	267, 333, 474
BseBI	CCWGG	2 cut(s)	53, 658
BseDI	CCNNGG	3 cut(s)	459, 843, 1594
BseGI	GGATG	8 cut(s)	163, 175, 286, 595, 831, 1015, 1141, 1424
BseJI	GATNNNNATC	3 cut(s)	267, 333, 474
BseLI	CCNNNNNNNGG	6 cut(s)	465, 743, 842, 843, 1006, 1106
BseMII	CTCAG	3 cut(s)	510, 768, 1538
BseNI	ACTGG	2 cut(s)	967, 1231
BseRI	GAGGAG	1 cut(s)	127
BseSI	GKGCMC	2 cut(s)	836, 1582
BseXI	GCAGC	6 cut(s)	793, 796, 1228, 1295, 1389, 1580
BseYI	CCCAGC	1 cut(s)	1388
Bsh1236I	CGCG	1 cut(s)	1177
Bsh1285I	CGRYCG	2 cut(s)	191, 1204
BshFI	GGCC	4 cut(s)	834, 1155, 1230, 1658
BshTI	ACCGGT	1 cut(s)	1124
BsiEI	CGRYCG	2 cut(s)	191, 1204
BsiHKAI	GWGCWC	5 cut(s)	125, 258, 1226, 1582, 1591
BsiHKCI	CYCGRG	1 cut(s)	1667
BsiSI	CCGG	6 cut(s)	466, 843, 1000, 1125, 1338, 1350
BslFI	GGGAC	5 cut(s)	233, 335, 692, 1082, 1370
BslI	CCNNNNNNNGG	6 cut(s)	465, 743, 842, 843, 1006, 1106
BsmAI	GTCTC	5 cut(s)	333, 449, 971, 1164, 1427
BsmFI	GGGAC	5 cut(s)	233, 335, 692, 1082, 1370
BsmI	GAATGC	3 cut(s)	1171, 1487, 1564
BsnI	GGCC	4 cut(s)	834, 1155, 1230, 1658
Bso31I	GGTCTC	2 cut(s)	449, 971
BsoBI	CYCGRG	1 cut(s)	1667
Bsp120I	GGGCCC	1 cut(s)	832
Bsp1286I	GDGCHC	6 cut(s)	125, 258, 836, 1226, 1582, 1591
Bsp1407I	TGTACA	1 cut(s)	1297
Bsp19I	CCATGG	1 cut(s)	1594
BspACI	CCGC	2 cut(s)	187, 1177
BspANI	GGCC	4 cut(s)	834, 1155, 1230, 1658
BspCNI	CTCAG	3 cut(s)	511, 769, 1539
BspFNI	CGCG	1 cut(s)	1177
BspLI	GGNNCC	3 cut(s)	834, 835, 1336
BspMI	ACCTGC	1 cut(s)	1043
BspPI	GGATC	4 cut(s)	342, 521, 654, 1415
BspTNI	GGTCTC	2 cut(s)	449, 971
BsrFI	RCCGGY	1 cut(s)	1124
BsrGI	TGTACA	1 cut(s)	1297
BsrI	ACTGG	2 cut(s)	967, 1231
BssAI	RCCGGY	1 cut(s)	1124
BssECI	CCNNGG	3 cut(s)	459, 843, 1594
BssNI	GRCGYC	2 cut(s)	484, 856
BssSI	CACGAG	1 cut(s)	951
BssT1I	CCWWGG	2 cut(s)	459, 1594
Bst2BI	CACGAG	1 cut(s)	951
Bst2UI	CCWGG	2 cut(s)	53, 658
Bst4CI	ACNGT	5 cut(s)	37, 206, 344, 550, 1256
Bst6I	CTCTTC	2 cut(s)	744, 1279
BstACI	GRCGYC	2 cut(s)	484, 856
BstAPI	GCANNNNNTGC	3 cut(s)	1058, 1289, 1586
BstAUI	TGTACA	1 cut(s)	1297
BstC8I	GCNNGC	2 cut(s)	1179, 1566
BstDEI	CTNAG	6 cut(s)	25, 183, 444, 519, 777, 1547
BstDSI	CCRYGG	1 cut(s)	1594
BstEII	GGTNACC	1 cut(s)	869
BstF5I	GGATG	8 cut(s)	163, 175, 286, 595, 831, 1015, 1141, 1424
BstFNI	CGCG	1 cut(s)	1177
BstH2I	RGCGCY	1 cut(s)	1184
BstHHI	GCGC	2 cut(s)	1183, 1564
BstMAI	GTCTC	5 cut(s)	333, 449, 971, 1164, 1427
BstMCI	CGRYCG	2 cut(s)	191, 1204
BstNI	CCWGG	2 cut(s)	53, 658
BstNSI	RCATGY	2 cut(s)	889, 1417
BstPI	GGTNACC	1 cut(s)	869
BstSCI	CCNGG	6 cut(s)	51, 465, 656, 842, 998, 1348
BstSFI	CTRYAG	2 cut(s)	1236, 1641
BstSLI	GKGCMC	2 cut(s)	836, 1582
BstUI	CGCG	1 cut(s)	1177
BstV1I	GCAGC	6 cut(s)	793, 796, 1228, 1295, 1389, 1580
BstV2I	GAAGAC	1 cut(s)	38
Bsu36I	CCTNAGG	2 cut(s)	444, 519
BsuRI	GGCC	4 cut(s)	834, 1155, 1230, 1658
BtgI	CCRYGG	1 cut(s)	1594
BtsCI	GGATG	8 cut(s)	163, 175, 286, 595, 831, 1015, 1141, 1424
BtsI	GCAGTG	1 cut(s)	1213
BtsIMutI	CAGTG	3 cut(s)	1022, 1213, 1224
BveI	ACCTGC	1 cut(s)	1043
Cac8I	GCNNGC	2 cut(s)	1179, 1566
CaiI	CAGNNNCTG	3 cut(s)	1106, 1289, 1436
CfoI	GCGC	2 cut(s)	1183, 1564
Cfr10I	RCCGGY	1 cut(s)	1124
Cfr13I	GGNCC	4 cut(s)	463, 832, 833, 1335
CseI	GACGC	3 cut(s)	492, 845, 1123
Csp6I	GTAC	4 cut(s)	22, 632, 947, 1298
CspAI	ACCGGT	1 cut(s)	1124
CviAII	CATG	6 cut(s)	359, 886, 1189, 1414, 1595, 1636
CviQI	GTAC	4 cut(s)	22, 632, 947, 1298
DdeI	CTNAG	6 cut(s)	25, 183, 444, 519, 777, 1547
DraIII	CACNNNGTG	1 cut(s)	1586
DrdI	GACNNNNNNGTC	1 cut(s)	408
DseDI	GACNNNNNNGTC	1 cut(s)	408
Eam1104I	CTCTTC	2 cut(s)	744, 1279
EarI	CTCTTC	2 cut(s)	744, 1279
Ecl136II	GAGCTC	1 cut(s)	123
Eco130I	CCWWGG	2 cut(s)	459, 1594
Eco24I	GRGCYC	2 cut(s)	125, 836
Eco31I	GGTCTC	2 cut(s)	449, 971
Eco47I	GGWCC	2 cut(s)	463, 1335
Eco53kI	GAGCTC	1 cut(s)	123
Eco57I	CTGAAG	4 cut(s)	120, 792, 1113, 1458
Eco81I	CCTNAGG	2 cut(s)	444, 519
Eco88I	CYCGRG	1 cut(s)	1667
Eco91I	GGTNACC	1 cut(s)	869
EcoICRI	GAGCTC	1 cut(s)	123
EcoO109I	RGGNCCY	1 cut(s)	833
EcoO65I	GGTNACC	1 cut(s)	869
EcoRII	CCWGG	2 cut(s)	51, 656
EcoT14I	CCWWGG	2 cut(s)	459, 1594
EcoT38I	GRGCYC	2 cut(s)	125, 836
ErhI	CCWWGG	2 cut(s)	459, 1594
FaeI	CATG	6 cut(s)	362, 889, 1192, 1417, 1598, 1639
FaqI	GGGAC	5 cut(s)	233, 335, 692, 1082, 1370
FatI	CATG	6 cut(s)	358, 885, 1188, 1413, 1594, 1635
FauI	CCCGC	1 cut(s)	1170
FbaI	TGATCA	1 cut(s)	1084
FblI	GTMKAC	1 cut(s)	1542
Fnu4HI	GCNGC	6 cut(s)	807, 810, 1242, 1284, 1403, 1569
FokI	GGATG	8 cut(s)	170, 182, 293, 602, 838, 1022, 1148, 1411
FriOI	GRGCYC	2 cut(s)	125, 836
Fsp4HI	GCNGC	6 cut(s)	807, 810, 1242, 1284, 1403, 1569
FspBI	CTAG	3 cut(s)	216, 852, 1014
FspI	TGCGCA	1 cut(s)	1563
GlaI	GCGC	2 cut(s)	1182, 1563
GluI	GCNGC	6 cut(s)	807, 810, 1242, 1284, 1403, 1569
GsaI	CCCAGC	1 cut(s)	1392
GsuI	CTGGAG	3 cut(s)	74, 834, 1025
HaeII	RGCGCY	1 cut(s)	1184
HaeIII	GGCC	4 cut(s)	834, 1155, 1230, 1658
HapII	CCGG	6 cut(s)	466, 843, 1000, 1125, 1338, 1350
HgaI	GACGC	3 cut(s)	492, 845, 1123
HhaI	GCGC	2 cut(s)	1183, 1564
Hin1I	GRCGYC	2 cut(s)	484, 856
Hin1II	CATG	6 cut(s)	362, 889, 1192, 1417, 1598, 1639
Hin6I	GCGC	2 cut(s)	1181, 1562
HinP1I	GCGC	2 cut(s)	1181, 1562
HincII	GTYRAC	2 cut(s)	798, 1519
HindII	GTYRAC	2 cut(s)	798, 1519
HinfI	GANTC	6 cut(s)	409, 784, 917, 1027, 1326, 1504
HpaII	CCGG	6 cut(s)	466, 843, 1000, 1125, 1338, 1350
HphI	GGTGA	5 cut(s)	41, 92, 149, 194, 1139
Hpy166II	GTNNAC	5 cut(s)	209, 798, 1519, 1543, 1580
Hpy188I	TCNGA	9 cut(s)	100, 397, 408, 543, 564, 772, 892, 1164, 1496
Hpy8I	GTNNAC	5 cut(s)	209, 798, 1519, 1543, 1580
HpyAV	CCTTC	4 cut(s)	95, 142, 493, 777
HpyCH4III	ACNGT	5 cut(s)	37, 206, 344, 550, 1256
HpyCH4IV	ACGT	2 cut(s)	211, 1585
HpyF3I	CTNAG	6 cut(s)	25, 183, 444, 519, 777, 1547
HpySE526I	ACGT	2 cut(s)	211, 1585
Hsp92I	GRCGYC	2 cut(s)	484, 856
Hsp92II	CATG	6 cut(s)	362, 889, 1192, 1417, 1598, 1639
HspAI	GCGC	2 cut(s)	1181, 1562
Ksp22I	TGATCA	1 cut(s)	1084
LmnI	GCTCC	7 cut(s)	120, 253, 815, 848, 934, 1291, 1490
Lsp1109I	GCAGC	6 cut(s)	793, 796, 1228, 1295, 1389, 1580
LweI	GCATC	4 cut(s)	208, 1000, 1226, 1253
MaeI	CTAG	3 cut(s)	216, 852, 1014
MaeII	ACGT	2 cut(s)	211, 1585
MaeIII	GTNAC	5 cut(s)	137, 353, 372, 869, 1078
MfeI	CAATTG	1 cut(s)	1377
MhlI	GDGCHC	6 cut(s)	125, 258, 836, 1226, 1582, 1591
MluCI	AATT	5 cut(s)	651, 1047, 1377, 1490, 1661
MlyI	GAGTC	2 cut(s)	418, 1320
MmeI	TCCRAC	1 cut(s)	1023
MseI	TTAA	4 cut(s)	882, 1407, 1473, 1684
MslI	CAYNNNNRTG	2 cut(s)	135, 884
MspA1I	CMGCKG	3 cut(s)	1076, 1241, 1364
MspI	CCGG	6 cut(s)	466, 843, 1000, 1125, 1338, 1350
MspR9I	CCNGG	6 cut(s)	53, 467, 658, 844, 1000, 1350
MunI	CAATTG	1 cut(s)	1377
Mva1269I	GAATGC	3 cut(s)	1171, 1487, 1564
MvaI	CCWGG	2 cut(s)	53, 658
MvnI	CGCG	1 cut(s)	1177
NciI	CCSGG	4 cut(s)	467, 844, 1000, 1350
NcoI	CCATGG	1 cut(s)	1594
NlaIII	CATG	6 cut(s)	362, 889, 1192, 1417, 1598, 1639
NlaIV	GGNNCC	3 cut(s)	834, 835, 1336
NmuCI	GTSAC	3 cut(s)	137, 353, 372
NsbI	TGCGCA	1 cut(s)	1563
NspI	RCATGY	2 cut(s)	889, 1417
PciI	ACATGT	2 cut(s)	885, 1413
PcsI	WCGNNNNNNNCGW	1 cut(s)	397
PctI	GAATGC	3 cut(s)	1171, 1487, 1564
PfeI	GAWTC	4 cut(s)	784, 917, 1027, 1504
PflMI	CCANNNNNTGG	1 cut(s)	1106
PinAI	ACCGGT	1 cut(s)	1124
PkrI	GCNGC	6 cut(s)	808, 811, 1243, 1285, 1404, 1570
Ple19I	CGATCG	1 cut(s)	1204
PleI	GAGTC	2 cut(s)	417, 1320
PpsI	GAGTC	2 cut(s)	417, 1320
PscI	ACATGT	2 cut(s)	885, 1413
Psp124BI	GAGCTC	1 cut(s)	125
Psp6I	CCWGG	2 cut(s)	51, 656
PspEI	GGTNACC	1 cut(s)	869
PspFI	CCCAGC	1 cut(s)	1388
PspGI	CCWGG	2 cut(s)	51, 656
PspN4I	GGNNCC	3 cut(s)	834, 835, 1336
PspOMI	GGGCCC	1 cut(s)	832
PspPI	GGNCC	4 cut(s)	463, 832, 833, 1335
PstNI	CAGNNNCTG	3 cut(s)	1106, 1289, 1436
PvuI	CGATCG	1 cut(s)	1204
PvuII	CAGCTG	3 cut(s)	1076, 1241, 1364
RsaI	GTAC	4 cut(s)	23, 633, 948, 1299
RsaNI	GTAC	4 cut(s)	22, 632, 947, 1298
RseI	CAYNNNNRTG	2 cut(s)	135, 884
SacI	GAGCTC	1 cut(s)	125
SaqAI	TTAA	4 cut(s)	882, 1407, 1473, 1684
SatI	GCNGC	6 cut(s)	807, 810, 1242, 1284, 1403, 1569
Sau96I	GGNCC	4 cut(s)	463, 832, 833, 1335
ScaI	AGTACT	1 cut(s)	23
SchI	GAGTC	2 cut(s)	418, 1320
ScrFI	CCNGG	6 cut(s)	53, 467, 658, 844, 1000, 1350
SduI	GDGCHC	6 cut(s)	125, 258, 836, 1226, 1582, 1591
SfaNI	GCATC	4 cut(s)	208, 1000, 1226, 1253
SfcI	CTRYAG	2 cut(s)	1236, 1641
SgrAI	CRCCGGYG	1 cut(s)	1124
SinI	GGWCC	2 cut(s)	463, 1335
SmiMI	CAYNNNNRTG	2 cut(s)	135, 884
SmlI	CTYRAG	1 cut(s)	124
SmoI	CTYRAG	1 cut(s)	124
Sse9I	AATT	5 cut(s)	651, 1047, 1377, 1490, 1661
SsiI	CCGC	2 cut(s)	187, 1177
SspMI	CTAG	3 cut(s)	216, 852, 1014
SstI	GAGCTC	1 cut(s)	125
StyD4I	CCNGG	6 cut(s)	51, 465, 656, 842, 998, 1348
StyI	CCWWGG	2 cut(s)	459, 1594
TaaI	ACNGT	5 cut(s)	37, 206, 344, 550, 1256
TaiI	ACGT	2 cut(s)	214, 1588
TaqI	TCGA	7 cut(s)	191, 337, 391, 649, 1200, 1220, 1371
TaqII	GACCGA	1 cut(s)	360
TasI	AATT	5 cut(s)	651, 1047, 1377, 1490, 1661
TatI	WGTACW	2 cut(s)	21, 1297
TfiI	GAWTC	4 cut(s)	784, 917, 1027, 1504
Tru1I	TTAA	4 cut(s)	882, 1407, 1473, 1684
Tru9I	TTAA	4 cut(s)	882, 1407, 1473, 1684
TscAI	CASTG	3 cut(s)	1029, 1213, 1231
TseFI	GTSAC	3 cut(s)	137, 353, 372
TseI	GCWGC	6 cut(s)	806, 809, 1241, 1283, 1402, 1568
Tsp45I	GTSAC	3 cut(s)	137, 353, 372
TspDTI	ATGAA	4 cut(s)	75, 174, 375, 972
TspGWI	ACGGA	1 cut(s)	649
TspRI	CASTG	3 cut(s)	1029, 1213, 1231
Van91I	CCANNNNNTGG	1 cut(s)	1106
VneI	GTGCAC	1 cut(s)	1578
VpaK11BI	GGWCC	2 cut(s)	463, 1335
XapI	RAATTY	3 cut(s)	651, 1490, 1661
XceI	RCATGY	2 cut(s)	889, 1417
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1129
XmiI	GTMKAC	1 cut(s)	1542
XspI	CTAG	3 cut(s)	216, 852, 1014
ZrmI	AGTACT	1 cut(s)	23

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.