Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0007651

Physical Location & Seq

Genomic Coordinates Reverse (-)

43830902 .. 43839891

Gene Structure 8990 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG232600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1881 bp

ATGGATTTCGATGAGTATGACTATTTAGAGAAAACAGTTGAAAATCCTGAACCTCCAACATCAAAGGACAATGCAAATGGTGGGGAGGACACTTTGAAATCCGGAGAAAAAGGCCGCAGCCGAAGTTCAAAGCATAAGAGTGATGATAAAGATCATGACGGGGAGCGTCGCTCAAAGCGTTCAAAATCTGGAGATGAGTCGCATGACCATGATCGGCAAAGAGAGAGGGGATCTTCTCGCCGCCGTTCACAGTCCAGAGATAGAGAAAGGGACCGTCACAGGAGCAGTCGGGAACACAGAGATAGGGAGGATAGAGAAAAGGAGGAAAGAAATGGCAAGGAGAGAGATAGGAACAGGGACAGAGAACAGGATCGTGATCGAGACAGGGATAGGAGAGAGCGTGACCGCGATACTGACCGGGACAGGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGATCGGTCACGTCGAAGCAGGAGTCATTCAGAAAGGCATAGAAGTGATCGGGATGAAAGAGAGAAAAGCCGTGACATAGAGCATAAAGAAAGGGAGAAGGAGAAAGATCTACGGGAGCGGGAGAAAGAAAGCAGATATACTAGAGCAGTCTTCAGATGGTCTTTCTGGCAATTGGGCCAGAAATGCTGTTACTTCCTTGTGTGTATAAGATATAAAGAAAAAAAGGAAGAAGTGACAGAACCAGAGGCTGATCCTGAAAGAGATCAGAGGACAGTATTTGCTTATCAGATTTGTCTGAAGGCAGACGAAAGAGATGTATATGATTTCTTCTCACGAGCCGGCAAGGTCCGCGATGTACGTCTCATTATGGATCGTAACTCAAGACGGTCCAAGGGAGTTGGGTATATCGAGTTCTATGATGCGATGTCAGTACCTATGGCTATTGCACTCTCTGGTCAACCTCTTCGAGGTCAACCAGTGATGGTGAAGCCATCAGAGGCTGAGAAGAATCTGGTTCAGTCAACTTCTGTGGTTGCTGGAGCCGGTGGGATGATAGGTCCATATTCTGGTGGAGCTAGACGGCTTTATGTTGGCAATCTACACACCAACATAAAAGAAGATGATCTACGCCAGGTTTTTGGAGCATTTGGTGCTGTAGAACTGGTTCAGTTGCCTCTTGACGAAACTAACAACTGCAAAGGTTTTGGATTTGTTCAGTTTCAACGGCTTGAAGATGCTAGAAATGCACTGAGTTTGAATGGCCAATTGGAGATTGCTGGTCGAGTAATTAAGGTATCAGCTGTGACTGACCAGGCTGGAATGCAAGATGTTGGAGCAAATGCTGGTGATTTTGATGACGATGAAGGTGGTGGCTTGTCATTGAATGCCCGGTCACGAGCAATTCTTATGCAGAAACTGGATCGTAGTGGCAGTGGATCAAGTCTTGCTGTCAATAGCACTGGTCTACCAGTGGCACTTCCAGCGGCACCAATCCTGGGAGCTGCACCAGGAGTTTCTTCTCTTGGTACTCCCATGGCCTCTGTTCCTGGTCTTGCTGGACTTGGTGTTCCGGGTCTTCAAATTCCTACAGCTACTGTTCCTTCTGTAGATACAATTGGTGTTCCAAGCGAATGCTTACTGTTGACAAATATGTTTGATCCTAAAGAAATTGAGGCTGAACCAGATATTGACGTGGACATTAAAGAAGATGTTCAGGAGGAATGTTCAAAATACGGGAAGCTGAAACATATTTTTGTTGATAAGAATACCGCTGGTTTTGTGTACTTGAGATTTGAGAACACACAAGCTGCAATAAATGCTCGACAAGTTCTGCATGGAAGATGGTTTGCTGGGAAGATGATCACAGCGACTTTCATGTTGCCTCAGACCTATGAGACTAAATTCCCTGAGAGCCGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0016604 GO:0016607 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RBM39linker RRM_1

Protein Analysis

626

Amino Acids

71.29

Weight (kDa)

6.91

Isoelectric Point (pI)

52.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	255 - 314	1.8e-09	RNA recognition motif
RRM_1	PF00076	349 - 418	2.2e-19	RNA recognition motif
RBM39linker	PF15519	438 - 543	2.1e-15	linker between RRM2 and RRM3 domains in RBM39 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007651)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16940 AT2G16940 AT2G16940 AT2G16940 AT2G16940
fragaria_vesca	FvH4_2g15540
malus_domestica	MD05G1123800.v1.1 MD10G1126500.v1.1
prunus_persica	Prupe.8G167600_v2.0.a1 Prupe.8G167800_v2.0.a1 Prupe.8G167800_v2.0.a1 Prupe.8G167800_v2.0.a1
pyrus_communis	pycom05g11800
rosa_chinensis	RchiOBHm_Chr6g0278711
rosa_laevigata	RLG00000013199
rosa_multiflora	Rmu_sc0000531.1_g000006
rosa_roxburghii	Rroxscaffold_7G00189690 Rroxscaffold_7G00189950
rosa_rugosa	Rorug06G0118400
rosa_samantha	Rh6AG227200 Rh6BG232600 Rh6CG234800 Rh6DG226400
rosa_wichuraiana	Rw6G019930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1447
AccB7I	CCANNNNNTGG	1 cut(s)	1028
AccBSI	CCGCTC	1 cut(s)	580
AccI	GTMKAC	1 cut(s)	1426
AccII	CGCG	2 cut(s)	408, 813
AccIII	TCCGGA	1 cut(s)	101
AciI	CCGC	7 cut(s)	115, 241, 406, 580, 811, 1445, 1731
AclWI	GGATC	8 cut(s)	238, 378, 471, 707, 840, 1389, 1405, 1613
AcoI	YGGCCR	1 cut(s)	1222
AcsI	RAATTY	2 cut(s)	1542, 1862
AcuI	CTGAAG	2 cut(s)	598, 779
AfaI	GTAC	4 cut(s)	819, 894, 1489, 1745
AfiI	CCNNNNNNNGG	4 cut(s)	424, 929, 1028, 1457
AjiI	CACGTC	2 cut(s)	473, 1654
AjnI	CCWGG	5 cut(s)	1092, 1272, 1455, 1468, 1507
AjuI	GAANNNNNNNTTGG	2 cut(s)	1211, 1243
AloI	GAACNNNNNNTCC	2 cut(s)	1512, 1544
AluBI	AGCT	6 cut(s)	1037, 1262, 1463, 1553, 1702, 1769
AluI	AGCT	6 cut(s)	1037, 1262, 1463, 1553, 1702, 1769
Alw26I	GTCTC	3 cut(s)	375, 827, 1850
AlwI	GGATC	8 cut(s)	238, 378, 471, 707, 840, 1389, 1405, 1613
AlwNI	CAGNNNCTG	4 cut(s)	710, 962, 1378, 1556
Aor13HI	TCCGGA	1 cut(s)	101
AoxI	GGCC	4 cut(s)	112, 637, 1222, 1497
ApeKI	GCWGC	3 cut(s)	117, 1463, 1769
ApoI	RAATTY	2 cut(s)	1542, 1862
ArsI	GACNNNNNNTTYG	2 cut(s)	469, 501
Asp700I	GAANNNNTTC	2 cut(s)	1125, 1671
AspS9I	GGNCC	5 cut(s)	271, 637, 808, 849, 1019
AsuC2I	CCSGG	3 cut(s)	419, 1351, 1533
AsuHPI	GGTGA	2 cut(s)	958, 1319
AvaII	GGWCC	4 cut(s)	271, 808, 849, 1019
BalI	TGGCCA	1 cut(s)	1224
BanI	GGYRCC	1 cut(s)	1447
BarI	GAAGNNNNNNTAC	2 cut(s)	1071, 1103
BauI	CACGAG	2 cut(s)	795, 1356
BbsI	GAAGAC	2 cut(s)	604, 1529
BbvI	GCAGC	3 cut(s)	129, 1450, 1756
BccI	CCATC	4 cut(s)	612, 937, 961, 1797
BceAI	ACGGC	4 cut(s)	228, 516, 1058, 1202
BciT130I	CCWGG	5 cut(s)	1094, 1274, 1457, 1470, 1509
BclI	TGATCA	1 cut(s)	1821
BcnI	CCSGG	3 cut(s)	419, 1351, 1533
BcoDI	GTCTC	3 cut(s)	375, 827, 1850
BfaI	CTAG	3 cut(s)	603, 1038, 1200
BfmI	CTRYAG	3 cut(s)	1116, 1548, 1566
BglII	AGATCT	1 cut(s)	568
BisI	GCNGC	6 cut(s)	115, 118, 241, 1446, 1464, 1770
BlsI	GCNGC	6 cut(s)	116, 119, 242, 1447, 1465, 1771
Bme1390I	CCNGG	8 cut(s)	419, 1094, 1274, 1351, 1457, 1470, 1509, 1533
Bme18I	GGWCC	4 cut(s)	271, 808, 849, 1019
BmgBI	CACGTC	2 cut(s)	473, 1654
BmgT120I	GGNCC	5 cut(s)	271, 637, 808, 849, 1019
BmiI	GGNNCC	3 cut(s)	272, 1003, 1449
BmrFI	CCNGG	8 cut(s)	419, 1094, 1274, 1351, 1457, 1470, 1509, 1533
BmsI	GCATC	2 cut(s)	871, 1186
BpiI	GAAGAC	2 cut(s)	604, 1529
BplI	GAGNNNNNCTC	2 cut(s)	155, 187
BpmI	CTGGAG	2 cut(s)	210, 1020
BpuEI	CTTGAG	2 cut(s)	826, 1768
BpuMI	CCSGG	3 cut(s)	419, 1351, 1533
BsaBI	GATNNNNATC	2 cut(s)	150, 375
BsaJI	CCNNGG	3 cut(s)	852, 1456, 1494
BsaWI	WCCGGW	1 cut(s)	101
BsaXI	ACNNNNNCTCC	2 cut(s)	385, 415
Bsc4I	CCNNNNNNNGG	4 cut(s)	424, 929, 1028, 1457
Bse118I	RCCGGY	3 cut(s)	800, 1004, 1875
Bse1I	ACTGG	5 cut(s)	938, 1128, 1383, 1426, 1430
Bse8I	GATNNNNATC	2 cut(s)	150, 375
BseAI	TCCGGA	1 cut(s)	101
BseBI	CCWGG	5 cut(s)	1094, 1274, 1457, 1470, 1509
BseDI	CCNNGG	3 cut(s)	852, 1456, 1494
BseGI	GGATG	2 cut(s)	520, 1017
BseJI	GATNNNNATC	2 cut(s)	150, 375
BseLI	CCNNNNNNNGG	4 cut(s)	424, 929, 1028, 1457
BseMII	CTCAG	4 cut(s)	954, 1202, 1859, 1860
BseNI	ACTGG	5 cut(s)	938, 1128, 1383, 1426, 1430
BseXI	GCAGC	3 cut(s)	129, 1450, 1756
BseYI	CCCAGC	1 cut(s)	1811
BsgI	GTGCAG	1 cut(s)	1449
Bsh1236I	CGCG	2 cut(s)	408, 813
BshFI	GGCC	4 cut(s)	114, 639, 1224, 1499
BshNI	GGYRCC	1 cut(s)	1447
BsiSI	CCGG	7 cut(s)	102, 418, 801, 1005, 1351, 1532, 1876
BslFI	GGGAC	3 cut(s)	284, 371, 434
BslI	CCNNNNNNNGG	4 cut(s)	424, 929, 1028, 1457
BsmAI	GTCTC	3 cut(s)	375, 827, 1850
BsmBI	CGTCTC	1 cut(s)	827
BsmFI	GGGAC	3 cut(s)	284, 371, 434
BsmI	GAATGC	3 cut(s)	1287, 1351, 1598
BsnI	GGCC	4 cut(s)	114, 639, 1224, 1499
Bsp13I	TCCGGA	1 cut(s)	101
Bsp19I	CCATGG	1 cut(s)	1494
BspACI	CCGC	7 cut(s)	115, 241, 406, 580, 811, 1445, 1731
BspANI	GGCC	4 cut(s)	114, 639, 1224, 1499
BspCNI	CTCAG	4 cut(s)	955, 1203, 1858, 1861
BspEI	TCCGGA	1 cut(s)	101
BspFNI	CGCG	2 cut(s)	408, 813
BspHI	TCATGA	1 cut(s)	154
BspLI	GGNNCC	3 cut(s)	272, 1003, 1449
BspPI	GGATC	8 cut(s)	238, 378, 471, 707, 840, 1389, 1405, 1613
BspT107I	GGYRCC	1 cut(s)	1447
BsrBI	CCGCTC	1 cut(s)	580
BsrFI	RCCGGY	3 cut(s)	800, 1004, 1875
BsrI	ACTGG	5 cut(s)	938, 1128, 1383, 1426, 1430
BssAI	RCCGGY	3 cut(s)	800, 1004, 1875
BssECI	CCNNGG	3 cut(s)	852, 1456, 1494
BssSI	CACGAG	2 cut(s)	795, 1356
BssT1I	CCWWGG	2 cut(s)	852, 1494
Bst2BI	CACGAG	2 cut(s)	795, 1356
Bst2UI	CCWGG	5 cut(s)	1094, 1274, 1457, 1470, 1509
Bst4CI	ACNGT	7 cut(s)	37, 252, 275, 736, 849, 1558, 1602
Bst6I	CTCTTC	1 cut(s)	930
BstAPI	GCANNNNNTGC	2 cut(s)	1112, 1778
BstC8I	GCNNGC	1 cut(s)	802
BstDEI	CTNAG	4 cut(s)	963, 1211, 1845, 1869
BstDSI	CCRYGG	1 cut(s)	1494
BstENI	CCTNNNNNAGG	1 cut(s)	927
BstF5I	GGATG	2 cut(s)	520, 1017
BstFNI	CGCG	2 cut(s)	408, 813
BstMAI	GTCTC	3 cut(s)	375, 827, 1850
BstMWI	GCNNNNNNNGC	6 cut(s)	645, 810, 1112, 1205, 1442, 1778
BstNI	CCWGG	5 cut(s)	1094, 1274, 1457, 1470, 1509
BstSCI	CCNGG	8 cut(s)	417, 1092, 1272, 1349, 1455, 1468, 1507, 1531
BstSFI	CTRYAG	3 cut(s)	1116, 1548, 1566
BstUI	CGCG	2 cut(s)	408, 813
BstV1I	GCAGC	3 cut(s)	129, 1450, 1756
BstV2I	GAAGAC	2 cut(s)	604, 1529
BstX2I	RGATCY	2 cut(s)	230, 568
BstXI	CCANNNNNNTGG	1 cut(s)	1100
BstYI	RGATCY	2 cut(s)	230, 568
BsuRI	GGCC	4 cut(s)	114, 639, 1224, 1499
BtgI	CCRYGG	1 cut(s)	1494
BtgZI	GCGATG	2 cut(s)	828, 899
BtrI	CACGTC	2 cut(s)	473, 1654
BtsCI	GGATG	2 cut(s)	520, 1017
BtsI	GCAGTG	1 cut(s)	1399
BtsIMutI	CAGTG	5 cut(s)	945, 1208, 1399, 1419, 1437
Cac8I	GCNNGC	1 cut(s)	802
CaiI	CAGNNNCTG	4 cut(s)	710, 962, 1378, 1556
CciI	TCATGA	1 cut(s)	154
Cfr10I	RCCGGY	3 cut(s)	800, 1004, 1875
Cfr13I	GGNCC	5 cut(s)	271, 637, 808, 849, 1019
CseI	GACGC	1 cut(s)	155
Csp6I	GTAC	4 cut(s)	818, 893, 1488, 1744
CspCI	CAANNNNNGTGG	2 cut(s)	972, 1007
CviAII	CATG	6 cut(s)	155, 203, 209, 1495, 1796, 1837
CviQI	GTAC	4 cut(s)	818, 893, 1488, 1744
DdeI	CTNAG	4 cut(s)	963, 1211, 1845, 1869
EaeI	YGGCCR	1 cut(s)	1222
Eam1104I	CTCTTC	1 cut(s)	930
EarI	CTCTTC	1 cut(s)	930
Eco130I	CCWWGG	2 cut(s)	852, 1494
Eco47I	GGWCC	4 cut(s)	271, 808, 849, 1019
Eco57I	CTGAAG	2 cut(s)	598, 779
EcoNI	CCTNNNNNAGG	1 cut(s)	927
EcoRII	CCWGG	5 cut(s)	1092, 1272, 1455, 1468, 1507
EcoT14I	CCWWGG	2 cut(s)	852, 1494
ErhI	CCWWGG	2 cut(s)	852, 1494
Esp3I	CGTCTC	1 cut(s)	827
FaeI	CATG	6 cut(s)	158, 206, 212, 1498, 1799, 1840
FaqI	GGGAC	3 cut(s)	284, 371, 434
FatI	CATG	6 cut(s)	154, 202, 208, 1494, 1795, 1836
FauI	CCCGC	1 cut(s)	573
FbaI	TGATCA	1 cut(s)	1821
FblI	GTMKAC	1 cut(s)	1426
Fnu4HI	GCNGC	6 cut(s)	115, 118, 241, 1446, 1464, 1770
FokI	GGATG	2 cut(s)	527, 1024
Fsp4HI	GCNGC	6 cut(s)	115, 118, 241, 1446, 1464, 1770
FspBI	CTAG	3 cut(s)	603, 1038, 1200
GluI	GCNGC	6 cut(s)	115, 118, 241, 1446, 1464, 1770
GsaI	CCCAGC	1 cut(s)	1815
GsuI	CTGGAG	2 cut(s)	210, 1020
HaeIII	GGCC	4 cut(s)	114, 639, 1224, 1499
HapII	CCGG	7 cut(s)	102, 418, 801, 1005, 1351, 1532, 1876
HgaI	GACGC	1 cut(s)	155
Hin1II	CATG	6 cut(s)	158, 206, 212, 1498, 1799, 1840
HincII	GTYRAC	4 cut(s)	920, 935, 984, 1605
HindII	GTYRAC	4 cut(s)	920, 935, 984, 1605
HinfI	GANTC	3 cut(s)	197, 484, 970
HpaII	CCGG	7 cut(s)	102, 418, 801, 1005, 1351, 1532, 1876
HphI	GGTGA	2 cut(s)	958, 1319
Hpy166II	GTNNAC	8 cut(s)	248, 920, 935, 984, 1427, 1605, 1657, 1744
Hpy188I	TCNGA	7 cut(s)	493, 617, 729, 750, 759, 958, 1848
Hpy8I	GTNNAC	8 cut(s)	248, 920, 935, 984, 1427, 1605, 1657, 1744
Hpy99I	CGWCG	2 cut(s)	171, 477
HpyCH4III	ACNGT	7 cut(s)	37, 252, 275, 736, 849, 1558, 1602
HpyCH4IV	ACGT	3 cut(s)	472, 820, 1653
HpyCH4V	TGCA	9 cut(s)	74, 908, 1158, 1208, 1285, 1372, 1466, 1772, 1795
HpyF10VI	GCNNNNNNNGC	6 cut(s)	645, 810, 1112, 1205, 1442, 1778
HpyF3I	CTNAG	4 cut(s)	963, 1211, 1845, 1869
HpySE526I	ACGT	3 cut(s)	472, 820, 1653
Hsp92II	CATG	6 cut(s)	158, 206, 212, 1498, 1799, 1840
Kpn2I	TCCGGA	1 cut(s)	101
KroI	GCCGGC	1 cut(s)	800
KroNI	GCCGGC	1 cut(s)	802
Ksp22I	TGATCA	1 cut(s)	1821
LmnI	GCTCC	8 cut(s)	163, 282, 577, 1001, 1034, 1103, 1295, 1460
Lsp1109I	GCAGC	3 cut(s)	129, 1450, 1756
LweI	GCATC	2 cut(s)	871, 1186
MaeI	CTAG	3 cut(s)	603, 1038, 1200
MaeII	ACGT	3 cut(s)	472, 820, 1653
MaeIII	GTNAC	9 cut(s)	275, 401, 468, 533, 650, 694, 836, 1264, 1353
MbiI	CCGCTC	1 cut(s)	580
MfeI	CAATTG	3 cut(s)	632, 1226, 1575
MflI	RGATCY	2 cut(s)	230, 568
MlsI	TGGCCA	1 cut(s)	1224
MluCI	AATT	8 cut(s)	632, 1226, 1248, 1362, 1542, 1575, 1629, 1862
MluNI	TGGCCA	1 cut(s)	1224
MlyI	GAGTC	2 cut(s)	206, 493
MmeI	TCCRAC	2 cut(s)	80, 1273
Mox20I	TGGCCA	1 cut(s)	1224
MroI	TCCGGA	1 cut(s)	101
MroNI	GCCGGC	1 cut(s)	800
MroXI	GAANNNNTTC	2 cut(s)	1125, 1671
MscI	TGGCCA	1 cut(s)	1224
MseI	TTAA	2 cut(s)	1251, 1662
MslI	CAYNNNNRTG	3 cut(s)	138, 207, 504
Msp20I	TGGCCA	1 cut(s)	1224
MspA1I	CMGCKG	3 cut(s)	1262, 1445, 1733
MspI	CCGG	7 cut(s)	102, 418, 801, 1005, 1351, 1532, 1876
MspR9I	CCNGG	8 cut(s)	419, 1094, 1274, 1351, 1457, 1470, 1509, 1533
MunI	CAATTG	3 cut(s)	632, 1226, 1575
Mva1269I	GAATGC	3 cut(s)	1287, 1351, 1598
MvaI	CCWGG	5 cut(s)	1094, 1274, 1457, 1470, 1509
MvnI	CGCG	2 cut(s)	408, 813
MwoI	GCNNNNNNNGC	6 cut(s)	645, 810, 1112, 1205, 1442, 1778
NaeI	GCCGGC	1 cut(s)	802
NciI	CCSGG	3 cut(s)	419, 1351, 1533
NcoI	CCATGG	1 cut(s)	1494
NgoMIV	GCCGGC	1 cut(s)	800
NlaIII	CATG	6 cut(s)	158, 206, 212, 1498, 1799, 1840
NlaIV	GGNNCC	3 cut(s)	272, 1003, 1449
NmuCI	GTSAC	7 cut(s)	275, 401, 468, 533, 694, 1264, 1353
PagI	TCATGA	1 cut(s)	154
PcsI	WCGNNNNNNNCGW	2 cut(s)	175, 472
PctI	GAATGC	3 cut(s)	1287, 1351, 1598
PdiI	GCCGGC	1 cut(s)	802
PdmI	GAANNNNTTC	2 cut(s)	1125, 1671
PfeI	GAWTC	1 cut(s)	970
PflMI	CCANNNNNTGG	1 cut(s)	1028
PkrI	GCNGC	6 cut(s)	116, 119, 242, 1447, 1465, 1771
PleI	GAGTC	2 cut(s)	205, 492
PpsI	GAGTC	2 cut(s)	205, 492
Psp6I	CCWGG	5 cut(s)	1092, 1272, 1455, 1468, 1507
PspFI	CCCAGC	1 cut(s)	1811
PspGI	CCWGG	5 cut(s)	1092, 1272, 1455, 1468, 1507
PspN4I	GGNNCC	3 cut(s)	272, 1003, 1449
PspPI	GGNCC	5 cut(s)	271, 637, 808, 849, 1019
PsrI	GAACNNNNNNTAC	4 cut(s)	857, 889, 1110, 1142
PstNI	CAGNNNCTG	4 cut(s)	710, 962, 1378, 1556
PsuI	RGATCY	2 cut(s)	230, 568
PvuII	CAGCTG	1 cut(s)	1262
RsaI	GTAC	4 cut(s)	819, 894, 1489, 1745
RsaNI	GTAC	4 cut(s)	818, 893, 1488, 1744
RseI	CAYNNNNRTG	3 cut(s)	138, 207, 504
SaqAI	TTAA	2 cut(s)	1251, 1662
SatI	GCNGC	6 cut(s)	115, 118, 241, 1446, 1464, 1770
Sau96I	GGNCC	5 cut(s)	271, 637, 808, 849, 1019
SchI	GAGTC	2 cut(s)	206, 493
ScrFI	CCNGG	8 cut(s)	419, 1094, 1274, 1351, 1457, 1470, 1509, 1533
SfaNI	GCATC	2 cut(s)	871, 1186
SfcI	CTRYAG	3 cut(s)	1116, 1548, 1566
SinI	GGWCC	4 cut(s)	271, 808, 849, 1019
SmiMI	CAYNNNNRTG	3 cut(s)	138, 207, 504
SmlI	CTYRAG	2 cut(s)	841, 1747
SmoI	CTYRAG	2 cut(s)	841, 1747
Sse9I	AATT	8 cut(s)	632, 1226, 1248, 1362, 1542, 1575, 1629, 1862
SsiI	CCGC	7 cut(s)	115, 241, 406, 580, 811, 1445, 1731
SspMI	CTAG	3 cut(s)	603, 1038, 1200
StyD4I	CCNGG	8 cut(s)	417, 1092, 1272, 1349, 1455, 1468, 1507, 1531
StyI	CCWWGG	2 cut(s)	852, 1494
TaaI	ACNGT	7 cut(s)	37, 252, 275, 736, 849, 1558, 1602
TaiI	ACGT	3 cut(s)	475, 823, 1656
TaqI	TCGA	7 cut(s)	9, 379, 475, 870, 928, 1243, 1783
TaqII	GACCGA	1 cut(s)	456
TasI	AATT	8 cut(s)	632, 1226, 1248, 1362, 1542, 1575, 1629, 1862
TatI	WGTACW	1 cut(s)	1743
TauI	GCSGC	3 cut(s)	117, 243, 1448
TfiI	GAWTC	1 cut(s)	970
Tru1I	TTAA	2 cut(s)	1251, 1662
Tru9I	TTAA	2 cut(s)	1251, 1662
TscAI	CASTG	5 cut(s)	945, 1215, 1399, 1426, 1437
TseFI	GTSAC	7 cut(s)	275, 401, 468, 533, 694, 1264, 1353
TseI	GCWGC	3 cut(s)	117, 1463, 1769
Tsp45I	GTSAC	7 cut(s)	275, 401, 468, 533, 694, 1264, 1353
TspDTI	ATGAA	3 cut(s)	531, 1338, 1825
TspRI	CASTG	5 cut(s)	945, 1215, 1399, 1426, 1437
Van91I	CCANNNNNTGG	1 cut(s)	1028
VpaK11BI	GGWCC	4 cut(s)	271, 808, 849, 1019
XagI	CCTNNNNNAGG	1 cut(s)	927
XapI	RAATTY	2 cut(s)	1542, 1862
XmiI	GTMKAC	1 cut(s)	1426
XmnI	GAANNNNTTC	2 cut(s)	1125, 1671
XspI	CTAG	3 cut(s)	603, 1038, 1200

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.