Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0007651

Physical Location & Seq

Genomic Coordinates Reverse (-)

20632743 .. 20641952

Gene Structure 9210 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1126500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1806 bp

ATGGATTTTGATGAGTATGATTATTTAGAGAAAACAGTTGAAAATCCTGAACCCCCGAAATCAAAAGAAACTGTGAATGGTGGTGAGGAAGCTTCAAAATCTGGAGAGAAAGGTCGCAGCCGAAGTTCAAGGCATAAAGGTGACGAGAAGGGTCACGATGAGGAGCGTCACTCAAAGCGTTCAAAATCTGGAGATGAGTCCCGTGAACGTGGTAATGATAGGCACAGAGAGAGGGGATCTTCTCGTCACCGCTCACAGTCCAGAGACAGAGAAAAGGATCGCCACAGGAGTAGCCGGGATCATAGAGGTAGGGAAGACAGAGAAAGGGAGGAAAGAAATGGTAAGGAGAGAAACAGGGAAAGAGACAAAGAGCGGGATCCCGATCGTGATAGAGACAGGAGAGAACGTGACCGCGAGGGTGACAGGGACCGGGAGAAGGATAAAGAGCCACCACGTCGAAGCATGAGCCATTCAGAAAGGCATCGAAGTGATCGGGATGAAAGAGAAAGGAGCCGGGAGGTGGAGCATAAAGAAAGAGATAAGGAGAGGGATTTGAGGGAGCGGGAAAAAGAAAACAGAAGACATAAAGACAAAAAGGAAGAAGGGACAGAACCAGAGTCTGATCCAGAGAGAGATCAAAGGACAGTATTTGCTTATCAGATTTGTTTGAAGGCAGATGAAAGAGATGTATATGAGTTCTTCTCAAGGGCTGGAAAGGTCCGCGATGTACGTCTTATTATGGATCGCAATTCAAGACGTTCGAAGGGAGTTGGGTATATTGAGTTTTATGATGCGATGTCAGTACCTATGGCGATCGCACTCTCTGGTCAGCCTCTTCTTGGTCAACCAGTGATGGTGAAGCCATCAGAGGCTGAGAAGAATCTAGTTCAGTCAACAACATCTGTTGTCACTGGACCAGGTGGGATGATAGGCCCATATTCTGGTGGAGCTAGAAGGCTGTATGTTGGAAATCTCCATACCAATATAAAAGAAGATGATCTCCGCCAGGTTTTTGGAGCATTTGGTCCTGTAGAACTGGTTCAGTTGCCTCATGATGAAACTAACAACTGCAAAGGTTTTGGATTTGTGCAGTTTGCACGTCTTGAAGATGCTAGAAATGCTCTTAGTTTGAATGGGCAATTGGAGATTGCAGGTCGTGTAATTAAGGTGTCGGCTGTTACAGACCAAGCTGGAATGCAAGATCTTGGAGCAAATGCTGGTGATTTTGATGACGATGAAGGCGGTGGCTTGTCATTGAATGCCCGCTCTCGAGCAATGCTTATGCAGAAATTGGACCGTAGCGGAACTGCATCAAGTATTACTGGTCCCTTAGGCACAACCGCTGTCAATAGCGCTGGTGTTTCCTTACCAATGGCACCAATCCTGGGAGCTGCACCAGGAATTTCTTCTCTTGTTCCTCCCATTACCTCTGTTCCTGGTTTTGCTGGACTTGGTATTGCAGGGCTTCAAATTCCGACAGCTACTCTTCCATCTGTAGATACAGTTGGTGTTCCAAGCGAATGTTTACTGTTGAAAAATATGTTTGATCCCACAGCCGAGTCGGAACCAGACTTTGACTTGGACATCAAAGATGATGTTCAGGAGGAGTGTTCAAAATACGGGAAATTGAAGCATATATATGTGGACAAGAATACTGCTGGACACGTGTACTTACGATTTGAAACTATAGAAGCTGCTTTAAATGCTCGACATGTTCTCCACGGAAGGTGGTTTGCTGGAAAGATGATCGAGACAACGTTCATGTTGCCCCAGACCTACGAGGCTAAATTCCCGGACAGCAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0016604 GO:0016607 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RBM39linker RRM_1

Protein Analysis

602

Amino Acids

67.91

Weight (kDa)

6.34

Isoelectric Point (pI)

52.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	225 - 283	4.8e-09	RNA recognition motif
RRM_1	PF00076	320 - 389	1.2e-20	RNA recognition motif
RBM39linker	PF15519	409 - 525	1.9e-18	linker between RRM2 and RRM3 domains in RBM39 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007651)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16940 AT2G16940 AT2G16940 AT2G16940 AT2G16940
fragaria_vesca	FvH4_2g15540
malus_domestica	MD05G1123800.v1.1 MD10G1126500.v1.1
prunus_persica	Prupe.8G167600_v2.0.a1 Prupe.8G167800_v2.0.a1 Prupe.8G167800_v2.0.a1 Prupe.8G167800_v2.0.a1
pyrus_communis	pycom05g11800
rosa_chinensis	RchiOBHm_Chr6g0278711
rosa_laevigata	RLG00000013199
rosa_multiflora	Rmu_sc0000531.1_g000006
rosa_roxburghii	Rroxscaffold_7G00189690 Rroxscaffold_7G00189950
rosa_rugosa	Rorug06G0118400
rosa_samantha	Rh6AG227200 Rh6BG232600 Rh6CG234800 Rh6DG226400
rosa_wichuraiana	Rw6G019930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1142
AccB1I	GGYRCC	1 cut(s)	1375
AccB7I	CCANNNNNTGG	1 cut(s)	941
AccBSI	CCGCTC	4 cut(s)	252, 373, 562, 1266
AccII	CGCG	2 cut(s)	414, 723
AclI	AACGTT	1 cut(s)	1757
AclWI	GGATC	8 cut(s)	244, 285, 306, 371, 384, 617, 750, 1541
AcsI	RAATTY	3 cut(s)	1401, 1470, 1787
AcvI	CACGTG	1 cut(s)	1666
AfaI	GTAC	3 cut(s)	729, 804, 1670
AfeI	AGCGCT	1 cut(s)	1354
AfiI	CCNNNNNNNGG	5 cut(s)	436, 520, 839, 941, 1385
AflIII	ACRYGT	3 cut(s)	1663, 1665, 1711
AjiI	CACGTC	2 cut(s)	455, 1100
AjnI	CCWGG	5 cut(s)	916, 1005, 1383, 1396, 1435
AjuI	GAANNNNNNNTTGG	2 cut(s)	1124, 1156
AluBI	AGCT	6 cut(s)	92, 950, 1190, 1391, 1481, 1694
AluI	AGCT	6 cut(s)	92, 950, 1190, 1391, 1481, 1694
Alw26I	GTCTC	4 cut(s)	258, 357, 387, 1745
AlwI	GGATC	8 cut(s)	244, 285, 306, 371, 384, 617, 750, 1541
AlwNI	CAGNNNCTG	2 cut(s)	620, 872
Ama87I	CYCGRG	1 cut(s)	1269
Aor51HI	AGCGCT	1 cut(s)	1354
AoxI	GGCC	1 cut(s)	931
ApeKI	GCWGC	3 cut(s)	117, 1391, 1694
ApoI	RAATTY	3 cut(s)	1401, 1470, 1787
AsiSI	GCGATCGC	1 cut(s)	816
Asp700I	GAANNNNTTC	2 cut(s)	1038, 1405
AspLEI	GCGC	1 cut(s)	1355
AspS9I	GGNCC	7 cut(s)	427, 718, 914, 932, 1025, 1294, 1325
AsuC2I	CCSGG	4 cut(s)	296, 431, 515, 1793
AsuHPI	GGTGA	6 cut(s)	95, 152, 239, 431, 868, 1232
AsuII	TTCGAA	1 cut(s)	761
AvaI	CYCGRG	1 cut(s)	1269
AvaII	GGWCC	6 cut(s)	427, 718, 914, 1025, 1294, 1325
AxyI	CCTNAGG	1 cut(s)	1330
BamHI	GGATCC	1 cut(s)	376
BanI	GGYRCC	1 cut(s)	1375
BbrPI	CACGTG	1 cut(s)	1666
BbsI	GAAGAC	2 cut(s)	321, 586
BbvI	GCAGC	3 cut(s)	129, 1378, 1681
BccI	CCATC	3 cut(s)	847, 871, 1498
BciT130I	CCWGG	5 cut(s)	918, 1007, 1385, 1398, 1437
BcnI	CCSGG	4 cut(s)	296, 431, 515, 1793
BcoDI	GTCTC	4 cut(s)	258, 357, 387, 1745
BfaI	CTAG	3 cut(s)	884, 951, 1113
BfmI	CTRYAG	3 cut(s)	1029, 1494, 1686
BfoI	RGCGCY	1 cut(s)	1356
BfuAI	ACCTGC	1 cut(s)	1142
BglII	AGATCT	1 cut(s)	1201
BisI	GCNGC	3 cut(s)	118, 1392, 1695
BlsI	GCNGC	3 cut(s)	119, 1393, 1696
Bme1390I	CCNGG	9 cut(s)	296, 431, 515, 918, 1007, 1385, 1398, 1437, 1793
Bme18I	GGWCC	6 cut(s)	427, 718, 914, 1025, 1294, 1325
BmeT110I	CYCGRG	1 cut(s)	1269
BmgBI	CACGTC	2 cut(s)	455, 1100
BmgT120I	GGNCC	7 cut(s)	427, 718, 914, 932, 1025, 1294, 1325
BmiI	GGNNCC	6 cut(s)	378, 428, 512, 1327, 1377, 1566
BmrFI	CCNGG	9 cut(s)	296, 431, 515, 918, 1007, 1385, 1398, 1437, 1793
BmsI	GCATC	4 cut(s)	490, 781, 1099, 1319
BpiI	GAAGAC	2 cut(s)	321, 586
BplI	GAGNNNNNCTC	4 cut(s)	155, 187, 686, 718
BpmI	CTGGAG	2 cut(s)	123, 210
Bpu14I	TTCGAA	1 cut(s)	761
BpuEI	CTTGAG	1 cut(s)	688
BpuMI	CCSGG	4 cut(s)	296, 431, 515, 1793
BsaAI	YACGTR	1 cut(s)	1666
BsaBI	GATNNNNATC	1 cut(s)	381
BsaJI	CCNNGG	2 cut(s)	1384, 1720
BsaXI	ACNNNNNCTCC	4 cut(s)	391, 421, 1701, 1731
Bsc4I	CCNNNNNNNGG	5 cut(s)	436, 520, 839, 941, 1385
Bse1I	ACTGG	4 cut(s)	848, 916, 1041, 1327
Bse21I	CCTNAGG	1 cut(s)	1330
Bse3DI	GCAATG	1 cut(s)	1281
Bse8I	GATNNNNATC	1 cut(s)	381
BseBI	CCWGG	5 cut(s)	918, 1007, 1385, 1398, 1437
BseDI	CCNNGG	2 cut(s)	1384, 1720
BseGI	GGATG	2 cut(s)	502, 930
BseJI	GATNNNNATC	1 cut(s)	381
BseLI	CCNNNNNNNGG	5 cut(s)	436, 520, 839, 941, 1385
BseMI	GCAATG	1 cut(s)	1281
BseMII	CTCAG	1 cut(s)	864
BseNI	ACTGG	4 cut(s)	848, 916, 1041, 1327
BseRI	GAGGAG	2 cut(s)	176, 1619
BseXI	GCAGC	3 cut(s)	129, 1378, 1681
BsgI	GTGCAG	2 cut(s)	1109, 1377
Bsh1236I	CGCG	2 cut(s)	414, 723
Bsh1285I	CGRYCG	2 cut(s)	385, 816
BshFI	GGCC	1 cut(s)	933
BshNI	GGYRCC	1 cut(s)	1375
BsiEI	CGRYCG	2 cut(s)	385, 816
BsiHKCI	CYCGRG	1 cut(s)	1269
BsiSI	CCGG	4 cut(s)	295, 430, 514, 1793
BslFI	GGGAC	4 cut(s)	184, 440, 619, 1311
BslI	CCNNNNNNNGG	5 cut(s)	436, 520, 839, 941, 1385
BsmAI	GTCTC	4 cut(s)	258, 357, 387, 1745
BsmFI	GGGAC	4 cut(s)	184, 440, 619, 1311
BsmI	GAATGC	2 cut(s)	1200, 1264
BsnI	GGCC	1 cut(s)	933
BsoBI	CYCGRG	1 cut(s)	1269
Bsp119I	TTCGAA	1 cut(s)	761
BspANI	GGCC	1 cut(s)	933
BspCNI	CTCAG	1 cut(s)	865
BspFNI	CGCG	2 cut(s)	414, 723
BspHI	TCATGA	1 cut(s)	1051
BspLI	GGNNCC	6 cut(s)	378, 428, 512, 1327, 1377, 1566
BspMI	ACCTGC	1 cut(s)	1142
BspPI	GGATC	8 cut(s)	244, 285, 306, 371, 384, 617, 750, 1541
BspT104I	TTCGAA	1 cut(s)	761
BspT107I	GGYRCC	1 cut(s)	1375
BsrBI	CCGCTC	4 cut(s)	252, 373, 562, 1266
BsrDI	GCAATG	1 cut(s)	1281
BsrI	ACTGG	4 cut(s)	848, 916, 1041, 1327
BssECI	CCNNGG	2 cut(s)	1384, 1720
Bst2UI	CCWGG	5 cut(s)	918, 1007, 1385, 1398, 1437
Bst4CI	ACNGT	7 cut(s)	37, 73, 258, 646, 1298, 1504, 1530
Bst6I	CTCTTC	2 cut(s)	840, 1491
BstBAI	YACGTR	1 cut(s)	1666
BstBI	TTCGAA	1 cut(s)	761
BstC8I	GCNNGC	1 cut(s)	1264
BstDEI	CTNAG	3 cut(s)	873, 1124, 1330
BstDSI	CCRYGG	1 cut(s)	1720
BstF5I	GGATG	2 cut(s)	502, 930
BstFNI	CGCG	2 cut(s)	414, 723
BstH2I	RGCGCY	1 cut(s)	1356
BstHHI	GCGC	1 cut(s)	1355
BstMAI	GTCTC	4 cut(s)	258, 357, 387, 1745
BstMCI	CGRYCG	2 cut(s)	385, 816
BstMWI	GCNNNNNNNGC	2 cut(s)	1118, 1703
BstNI	CCWGG	5 cut(s)	918, 1007, 1385, 1398, 1437
BstNSI	RCATGY	1 cut(s)	1715
BstSCI	CCNGG	9 cut(s)	294, 429, 513, 916, 1005, 1383, 1396, 1435, 1791
BstSFI	CTRYAG	3 cut(s)	1029, 1494, 1686
BstUI	CGCG	2 cut(s)	414, 723
BstV1I	GCAGC	3 cut(s)	129, 1378, 1681
BstV2I	GAAGAC	2 cut(s)	321, 586
BstX2I	RGATCY	3 cut(s)	236, 376, 1201
BstXI	CCANNNNNNTGG	1 cut(s)	1013
BstYI	RGATCY	3 cut(s)	236, 376, 1201
Bsu36I	CCTNAGG	1 cut(s)	1330
BsuRI	GGCC	1 cut(s)	933
BtgI	CCRYGG	1 cut(s)	1720
BtgZI	GCGATG	2 cut(s)	738, 809
BtrI	CACGTC	2 cut(s)	455, 1100
BtsCI	GGATG	2 cut(s)	502, 930
BtsIMutI	CAGTG	2 cut(s)	855, 909
BveI	ACCTGC	1 cut(s)	1142
Cac8I	GCNNGC	1 cut(s)	1264
CaiI	CAGNNNCTG	2 cut(s)	620, 872
CciI	TCATGA	1 cut(s)	1051
CfoI	GCGC	1 cut(s)	1355
Cfr13I	GGNCC	7 cut(s)	427, 718, 914, 932, 1025, 1294, 1325
CseI	GACGC	1 cut(s)	155
CsiI	ACCWGGT	1 cut(s)	916
Csp6I	GTAC	3 cut(s)	728, 803, 1669
CviAII	CATG	4 cut(s)	463, 1052, 1712, 1762
CviQI	GTAC	3 cut(s)	728, 803, 1669
DdeI	CTNAG	3 cut(s)	873, 1124, 1330
DraI	TTTAAA	1 cut(s)	1701
Eam1104I	CTCTTC	2 cut(s)	840, 1491
EarI	CTCTTC	2 cut(s)	840, 1491
EciI	GGCGGA	1 cut(s)	992
Eco47I	GGWCC	6 cut(s)	427, 718, 914, 1025, 1294, 1325
Eco47III	AGCGCT	1 cut(s)	1354
Eco72I	CACGTG	1 cut(s)	1666
Eco81I	CCTNAGG	1 cut(s)	1330
Eco88I	CYCGRG	1 cut(s)	1269
EcoRII	CCWGG	5 cut(s)	916, 1005, 1383, 1396, 1435
FaeI	CATG	4 cut(s)	466, 1055, 1715, 1765
FaqI	GGGAC	4 cut(s)	184, 440, 619, 1311
FatI	CATG	4 cut(s)	462, 1051, 1711, 1761
FauI	CCCGC	3 cut(s)	366, 555, 1271
Fnu4HI	GCNGC	3 cut(s)	118, 1392, 1695
FokI	GGATG	2 cut(s)	509, 937
Fsp4HI	GCNGC	3 cut(s)	118, 1392, 1695
FspBI	CTAG	3 cut(s)	884, 951, 1113
GlaI	GCGC	1 cut(s)	1354
GluI	GCNGC	3 cut(s)	118, 1392, 1695
GsuI	CTGGAG	2 cut(s)	123, 210
HaeII	RGCGCY	1 cut(s)	1356
HaeIII	GGCC	1 cut(s)	933
HapII	CCGG	4 cut(s)	295, 430, 514, 1793
HgaI	GACGC	1 cut(s)	155
HhaI	GCGC	1 cut(s)	1355
Hin1II	CATG	4 cut(s)	466, 1055, 1715, 1765
Hin6I	GCGC	1 cut(s)	1353
HinP1I	GCGC	1 cut(s)	1353
HincII	GTYRAC	2 cut(s)	845, 894
HindII	GTYRAC	2 cut(s)	845, 894
HindIII	AAGCTT	1 cut(s)	90
HinfI	GANTC	4 cut(s)	197, 617, 880, 1559
HpaII	CCGG	4 cut(s)	295, 430, 514, 1793
HphI	GGTGA	6 cut(s)	95, 152, 239, 431, 868, 1232
Hpy166II	GTNNAC	6 cut(s)	206, 845, 894, 1526, 1645, 1669
Hpy188I	TCNGA	6 cut(s)	475, 622, 660, 868, 1476, 1564
Hpy8I	GTNNAC	6 cut(s)	206, 845, 894, 1526, 1645, 1669
Hpy99I	CGWCG	1 cut(s)	459
HpyAV	CCTTC	8 cut(s)	142, 430, 596, 664, 757, 948, 1232, 1719
HpyCH4III	ACNGT	7 cut(s)	37, 73, 258, 646, 1298, 1504, 1530
HpyCH4IV	ACGT	8 cut(s)	208, 406, 454, 730, 757, 1099, 1665, 1757
HpyCH4V	TGCA	9 cut(s)	1071, 1090, 1097, 1151, 1198, 1285, 1310, 1394, 1460
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1118, 1703
HpyF3I	CTNAG	3 cut(s)	873, 1124, 1330
HpySE526I	ACGT	8 cut(s)	208, 406, 454, 730, 757, 1099, 1665, 1757
Hsp92II	CATG	4 cut(s)	466, 1055, 1715, 1765
HspAI	GCGC	1 cut(s)	1353
LmnI	GCTCC	8 cut(s)	163, 510, 523, 559, 947, 1016, 1208, 1388
Lsp1109I	GCAGC	3 cut(s)	129, 1378, 1681
LweI	GCATC	4 cut(s)	490, 781, 1099, 1319
MabI	ACCWGGT	1 cut(s)	916
MaeI	CTAG	3 cut(s)	884, 951, 1113
MaeII	ACGT	8 cut(s)	208, 406, 454, 730, 757, 1099, 1665, 1757
MaeIII	GTNAC	8 cut(s)	140, 152, 167, 245, 407, 419, 907, 1177
MbiI	CCGCTC	4 cut(s)	252, 373, 562, 1266
MfeI	CAATTG	1 cut(s)	1139
MflI	RGATCY	3 cut(s)	236, 376, 1201
MluCI	AATT	8 cut(s)	748, 1139, 1161, 1289, 1401, 1470, 1625, 1787
MlyI	GAGTC	3 cut(s)	206, 626, 1568
MmeI	TCCRAC	3 cut(s)	946, 1499, 1542
MroXI	GAANNNNTTC	2 cut(s)	1038, 1405
MseI	TTAA	2 cut(s)	1164, 1700
MslI	CAYNNNNRTG	3 cut(s)	138, 486, 1638
MspA1I	CMGCKG	1 cut(s)	1343
MspI	CCGG	4 cut(s)	295, 430, 514, 1793
MspR9I	CCNGG	9 cut(s)	296, 431, 515, 918, 1007, 1385, 1398, 1437, 1793
MunI	CAATTG	1 cut(s)	1139
Mva1269I	GAATGC	2 cut(s)	1200, 1264
MvaI	CCWGG	5 cut(s)	918, 1007, 1385, 1398, 1437
MvnI	CGCG	2 cut(s)	414, 723
MwoI	GCNNNNNNNGC	2 cut(s)	1118, 1703
NciI	CCSGG	4 cut(s)	296, 431, 515, 1793
NlaIII	CATG	4 cut(s)	466, 1055, 1715, 1765
NlaIV	GGNNCC	6 cut(s)	378, 428, 512, 1327, 1377, 1566
NmeAIII	GCCGAG	1 cut(s)	1582
NmuCI	GTSAC	7 cut(s)	140, 152, 167, 245, 407, 419, 907
NspI	RCATGY	1 cut(s)	1715
NspV	TTCGAA	1 cut(s)	761
PaeR7I	CTCGAG	1 cut(s)	1269
PagI	TCATGA	1 cut(s)	1051
PciI	ACATGT	1 cut(s)	1711
PctI	GAATGC	2 cut(s)	1200, 1264
PdmI	GAANNNNTTC	2 cut(s)	1038, 1405
PfeI	GAWTC	1 cut(s)	880
PflMI	CCANNNNNTGG	1 cut(s)	941
PfoI	TCCNGGA	1 cut(s)	1791
PkrI	GCNGC	3 cut(s)	119, 1393, 1696
Ple19I	CGATCG	2 cut(s)	385, 816
PleI	GAGTC	3 cut(s)	205, 625, 1567
PmaCI	CACGTG	1 cut(s)	1666
PmlI	CACGTG	1 cut(s)	1666
PpsI	GAGTC	3 cut(s)	205, 625, 1567
Ppu21I	YACGTR	1 cut(s)	1666
PscI	ACATGT	1 cut(s)	1711
Psp1406I	AACGTT	1 cut(s)	1757
Psp6I	CCWGG	5 cut(s)	916, 1005, 1383, 1396, 1435
PspCI	CACGTG	1 cut(s)	1666
PspGI	CCWGG	5 cut(s)	916, 1005, 1383, 1396, 1435
PspN4I	GGNNCC	6 cut(s)	378, 428, 512, 1327, 1377, 1566
PspPI	GGNCC	7 cut(s)	427, 718, 914, 932, 1025, 1294, 1325
PsrI	GAACNNNNNNTAC	2 cut(s)	1023, 1055
PstNI	CAGNNNCTG	2 cut(s)	620, 872
PsuI	RGATCY	3 cut(s)	236, 376, 1201
PvuI	CGATCG	2 cut(s)	385, 816
RgaI	GCGATCGC	1 cut(s)	816
RsaI	GTAC	3 cut(s)	729, 804, 1670
RsaNI	GTAC	3 cut(s)	728, 803, 1669
RseI	CAYNNNNRTG	3 cut(s)	138, 486, 1638
SaqAI	TTAA	2 cut(s)	1164, 1700
SatI	GCNGC	3 cut(s)	118, 1392, 1695
Sau96I	GGNCC	7 cut(s)	427, 718, 914, 932, 1025, 1294, 1325
SchI	GAGTC	3 cut(s)	206, 626, 1568
ScrFI	CCNGG	9 cut(s)	296, 431, 515, 918, 1007, 1385, 1398, 1437, 1793
SexAI	ACCWGGT	1 cut(s)	916
SfaAI	GCGATCGC	1 cut(s)	816
SfaNI	GCATC	4 cut(s)	490, 781, 1099, 1319
SfcI	CTRYAG	3 cut(s)	1029, 1494, 1686
Sfr274I	CTCGAG	1 cut(s)	1269
SfuI	TTCGAA	1 cut(s)	761
SgfI	GCGATCGC	1 cut(s)	816
SinI	GGWCC	6 cut(s)	427, 718, 914, 1025, 1294, 1325
SlaI	CTCGAG	1 cut(s)	1269
SmiMI	CAYNNNNRTG	3 cut(s)	138, 486, 1638
SmlI	CTYRAG	2 cut(s)	703, 1269
SmoI	CTYRAG	2 cut(s)	703, 1269
Sse9I	AATT	8 cut(s)	748, 1139, 1161, 1289, 1401, 1470, 1625, 1787
SspMI	CTAG	3 cut(s)	884, 951, 1113
StyD4I	CCNGG	9 cut(s)	294, 429, 513, 916, 1005, 1383, 1396, 1435, 1791
TaaI	ACNGT	7 cut(s)	37, 73, 258, 646, 1298, 1504, 1530
TaiI	ACGT	8 cut(s)	211, 409, 457, 733, 760, 1102, 1668, 1760
TaqI	TCGA	6 cut(s)	457, 484, 761, 1270, 1708, 1749
TasI	AATT	8 cut(s)	748, 1139, 1161, 1289, 1401, 1470, 1625, 1787
TatI	WGTACW	1 cut(s)	1668
TfiI	GAWTC	1 cut(s)	880
Tru1I	TTAA	2 cut(s)	1164, 1700
Tru9I	TTAA	2 cut(s)	1164, 1700
TscAI	CASTG	2 cut(s)	855, 916
TseFI	GTSAC	7 cut(s)	140, 152, 167, 245, 407, 419, 907
TseI	GCWGC	3 cut(s)	117, 1391, 1694
Tsp45I	GTSAC	7 cut(s)	140, 152, 167, 245, 407, 419, 907
TspDTI	ATGAA	5 cut(s)	513, 693, 1071, 1251, 1750
TspGWI	ACGGA	1 cut(s)	1737
TspRI	CASTG	2 cut(s)	855, 916
Van91I	CCANNNNNTGG	1 cut(s)	941
VpaK11BI	GGWCC	6 cut(s)	427, 718, 914, 1025, 1294, 1325
XapI	RAATTY	3 cut(s)	1401, 1470, 1787
XceI	RCATGY	1 cut(s)	1715
XhoI	CTCGAG	1 cut(s)	1269
XmnI	GAANNNNTTC	2 cut(s)	1038, 1405
XspI	CTAG	3 cut(s)	884, 951, 1113

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.