Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0007651

Physical Location & Seq

Genomic Coordinates Reverse (-)

41027550 .. 41037622

Gene Structure 10073 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG227200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1797 bp

ATGGATTTCGATGAGTATGACTATTTAGAGAAAACAGTTGAAAATCCTGAACCTCCGACATCAAAGGACAATGCAAATGGTGGGGAGGAAACTTTGAAGTCTGGAGAAAAAGGCCGCAGCCGGAGTTCAAAGCATAAGAGTGATGATAAAGATCATGACGGGGAGCGTCGCTCAAAGCGTTCAAAATCTGGAGATGAGTCGCATGACCATGATCGGCAAAGAGAGAGGGGATCTTCTCGCCACCGTTCACAGTCCAGAGATAGAGAAAGGGACCGTCACAGGAGTAGTCGGGAACACAGAGATAGGGAGGATAGAGAAAAGGAGGAAAGAAATGGTAAGGAGAGAGATAGGAACAGGGACAGAGAACAGGATCGTGATCGAGACAGGGATAGGAGAGAGCGTGACCGTGATACTGACCGGGACAGGCAGAAGGAGAAGGAGAAGGAGAAGGACCGGTCACGTCGAAGCAGGAGTCATTCAGAAAGGCATAGAAGTGATCGGGATGAAAGAGAGAAAAGCCGTGACATAGAGCATAAAGAAAGGGAGAAGGAGAAAGATCTGCGGGAGCGGGAGAAAGAAAGCAGAAGATATAAAGAAAAAAAGGAAGAAGTGACAGAACCAGAGGCTGATCCTGAAAGAGATCAGAGGACAGTATTTGCTTATCAGATTTGTCTGAAGGCAGACGAAAGAGATGTATATGATTTCTTCTCACGAGCCGGCAAGGTCCGTGATGTACGTCTCATTATGGATCGTAACTCAAGACGGTCCAAGGGAGTTGGGTATATTGAGTTCTATGATGCGATGTCAGTACCTATGGCTATTGCACTCTCTGGTCAACCTCTTCGAGGTCAACCAGTGATGGTGAAGCCATCAGAGGCTGAGAAGAATCTGGTTCAGTCAACTTCTGTGGTTACTGGAGCCGGTGGGATGATAGGTCCATATTCTGGTGGAGCTAGACGGCTATATGTTGGCAATCTACACACCAACATAAAAGAAGATGATCTACGCCAGGTTTTTGGAGCATTTGGTGCTGTAGAACTGGTTCAGTTGCCTCTTGACGAAACTAACAACTGCAAAGGTTTTGGATTTGTTCAGTTTCAACGGCTTGAAGATGCTAGAAATGCACTGAGTTTGAATGGCCAATTGGAGATTGCTGGTCGAGTAATTAAGGTATCAGCTGTGACTGACCAGGCTGGAATGCAAGATGTTGGAGCAAATGCTGGTGATTTTGATGACGATGAAGGTGGTGGCTTGTCATTGAATGCCCGGTCACGAGCAATTCTTATGCAGAAACTGGATCGTAGTGGCAGTGGATCAAGTCTTGCTGTCAATAGCACTGGTCTACCAGTGGGACTTCCAGCGGCACCAATCCTGGGAGCTGCACCAGGAGTTTCTTCTCTTGGTACTCCCATGGCCTCTGTTCCTGGTCTTGCTGGACTTGGTGTTCCGGGTCTTCAAATTCCTACAGCTACTGTTCCTTCTGTAGATACAATTGGTGTTCCAAGCGAATGCTTACTGTTGACAAATATGTTTGATCCTAAAGAAATTGAGGCTGAACCAGATATTGACGTGGACATTAAAGAAGATGTTCAGGAGGAATGTTCAAAATACGGGAAGCTGAAACATATTTTTGTTGATAAGAATACCGCTGGTTTTGTGTACTTGAGATTTGAGAACACACAAGCTGCAATAAATGCTCGACAAGTTCTCCATGGAAGATGGTTTGCTGGGAAGATGATCACAGCGACTTTCATGTTGCCTCAGACCTATGAGACTAAATTCCCTGAGAGCCGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0016604 GO:0016607 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RBM39linker RRM_1

Protein Analysis

598

Amino Acids

67.78

Weight (kDa)

6.43

Isoelectric Point (pI)

53.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	227 - 286	1.7e-09	RNA recognition motif
RRM_1	PF00076	321 - 390	2.1e-19	RNA recognition motif
RBM39linker	PF15519	410 - 515	3.5e-15	linker between RRM2 and RRM3 domains in RBM39 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007651)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16940 AT2G16940 AT2G16940 AT2G16940 AT2G16940
fragaria_vesca	FvH4_2g15540
malus_domestica	MD05G1123800.v1.1 MD10G1126500.v1.1
prunus_persica	Prupe.8G167600_v2.0.a1 Prupe.8G167800_v2.0.a1 Prupe.8G167800_v2.0.a1 Prupe.8G167800_v2.0.a1
pyrus_communis	pycom05g11800
rosa_chinensis	RchiOBHm_Chr6g0278711
rosa_laevigata	RLG00000013199
rosa_multiflora	Rmu_sc0000531.1_g000006
rosa_roxburghii	Rroxscaffold_7G00189690 Rroxscaffold_7G00189950
rosa_rugosa	Rorug06G0118400
rosa_samantha	Rh6AG227200 Rh6BG232600 Rh6CG234800 Rh6DG226400
rosa_wichuraiana	Rw6G019930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1363
AccB7I	CCANNNNNTGG	1 cut(s)	944
AccBSI	CCGCTC	1 cut(s)	568
AccI	GTMKAC	1 cut(s)	1342
AciI	CCGC	5 cut(s)	115, 562, 568, 1361, 1647
AclWI	GGATC	7 cut(s)	238, 378, 623, 756, 1305, 1321, 1529
AcoI	YGGCCR	1 cut(s)	1138
AcsI	RAATTY	2 cut(s)	1458, 1778
AcuI	CTGAAG	1 cut(s)	695
AfaI	GTAC	4 cut(s)	735, 810, 1405, 1661
AfiI	CCNNNNNNNGG	3 cut(s)	845, 944, 1373
AgeI	ACCGGT	1 cut(s)	453
AjiI	CACGTC	2 cut(s)	461, 1570
AjnI	CCWGG	5 cut(s)	1008, 1188, 1371, 1384, 1423
AjuI	GAANNNNNNNTTGG	2 cut(s)	1127, 1159
AloI	GAACNNNNNNTCC	2 cut(s)	1428, 1460
AluBI	AGCT	6 cut(s)	953, 1178, 1379, 1469, 1618, 1685
AluI	AGCT	6 cut(s)	953, 1178, 1379, 1469, 1618, 1685
Alw26I	GTCTC	3 cut(s)	375, 743, 1766
AlwI	GGATC	7 cut(s)	238, 378, 623, 756, 1305, 1321, 1529
AlwNI	CAGNNNCTG	4 cut(s)	626, 878, 1294, 1472
AoxI	GGCC	3 cut(s)	112, 1138, 1413
ApeKI	GCWGC	3 cut(s)	117, 1379, 1685
ApoI	RAATTY	2 cut(s)	1458, 1778
ArsI	GACNNNNNNTTYG	2 cut(s)	457, 489
AsiGI	ACCGGT	1 cut(s)	453
Asp700I	GAANNNNTTC	2 cut(s)	1041, 1587
AspS9I	GGNCC	5 cut(s)	271, 451, 724, 765, 935
AsuC2I	CCSGG	3 cut(s)	419, 1267, 1449
AsuHPI	GGTGA	2 cut(s)	874, 1235
AvaII	GGWCC	5 cut(s)	271, 451, 724, 765, 935
BalI	TGGCCA	1 cut(s)	1140
BanI	GGYRCC	1 cut(s)	1363
BarI	GAAGNNNNNNTAC	2 cut(s)	987, 1019
BauI	CACGAG	2 cut(s)	711, 1272
BbsI	GAAGAC	1 cut(s)	1445
BbvI	GCAGC	3 cut(s)	129, 1366, 1672
BccI	CCATC	3 cut(s)	853, 877, 1713
BceAI	ACGGC	3 cut(s)	504, 974, 1118
BciT130I	CCWGG	5 cut(s)	1010, 1190, 1373, 1386, 1425
BclI	TGATCA	1 cut(s)	1737
BcnI	CCSGG	3 cut(s)	419, 1267, 1449
BcoDI	GTCTC	3 cut(s)	375, 743, 1766
BfaI	CTAG	2 cut(s)	954, 1116
BfmI	CTRYAG	3 cut(s)	1032, 1464, 1482
BglII	AGATCT	1 cut(s)	556
BisI	GCNGC	5 cut(s)	115, 118, 1362, 1380, 1686
BlsI	GCNGC	5 cut(s)	116, 119, 1363, 1381, 1687
Bme1390I	CCNGG	8 cut(s)	419, 1010, 1190, 1267, 1373, 1386, 1425, 1449
Bme18I	GGWCC	5 cut(s)	271, 451, 724, 765, 935
BmgBI	CACGTC	2 cut(s)	461, 1570
BmgT120I	GGNCC	5 cut(s)	271, 451, 724, 765, 935
BmiI	GGNNCC	3 cut(s)	272, 919, 1365
BmrFI	CCNGG	8 cut(s)	419, 1010, 1190, 1267, 1373, 1386, 1425, 1449
BmsI	GCATC	2 cut(s)	787, 1102
BpiI	GAAGAC	1 cut(s)	1445
BplI	GAGNNNNNCTC	2 cut(s)	155, 187
BpmI	CTGGAG	3 cut(s)	123, 210, 936
BpuEI	CTTGAG	2 cut(s)	742, 1684
BpuMI	CCSGG	3 cut(s)	419, 1267, 1449
BsaBI	GATNNNNATC	2 cut(s)	150, 375
BsaJI	CCNNGG	4 cut(s)	768, 1372, 1410, 1711
BsaWI	WCCGGW	1 cut(s)	453
BsaXI	ACNNNNNCTCC	4 cut(s)	385, 415, 1692, 1722
Bsc4I	CCNNNNNNNGG	3 cut(s)	845, 944, 1373
Bse118I	RCCGGY	4 cut(s)	453, 716, 920, 1791
Bse1I	ACTGG	6 cut(s)	854, 919, 1044, 1299, 1342, 1346
Bse8I	GATNNNNATC	2 cut(s)	150, 375
BseBI	CCWGG	5 cut(s)	1010, 1190, 1373, 1386, 1425
BseDI	CCNNGG	4 cut(s)	768, 1372, 1410, 1711
BseGI	GGATG	2 cut(s)	508, 933
BseJI	GATNNNNATC	2 cut(s)	150, 375
BseLI	CCNNNNNNNGG	3 cut(s)	845, 944, 1373
BseMII	CTCAG	4 cut(s)	870, 1118, 1775, 1776
BseNI	ACTGG	6 cut(s)	854, 919, 1044, 1299, 1342, 1346
BseXI	GCAGC	3 cut(s)	129, 1366, 1672
BseYI	CCCAGC	1 cut(s)	1727
BsgI	GTGCAG	1 cut(s)	1365
BshFI	GGCC	3 cut(s)	114, 1140, 1415
BshNI	GGYRCC	1 cut(s)	1363
BshTI	ACCGGT	1 cut(s)	453
BsiSI	CCGG	8 cut(s)	121, 418, 454, 717, 921, 1267, 1448, 1792
BslFI	GGGAC	4 cut(s)	284, 371, 434, 1365
BslI	CCNNNNNNNGG	3 cut(s)	845, 944, 1373
BsmAI	GTCTC	3 cut(s)	375, 743, 1766
BsmBI	CGTCTC	1 cut(s)	743
BsmFI	GGGAC	4 cut(s)	284, 371, 434, 1365
BsmI	GAATGC	3 cut(s)	1203, 1267, 1514
BsnI	GGCC	3 cut(s)	114, 1140, 1415
Bsp19I	CCATGG	2 cut(s)	1410, 1711
BspACI	CCGC	5 cut(s)	115, 562, 568, 1361, 1647
BspANI	GGCC	3 cut(s)	114, 1140, 1415
BspCNI	CTCAG	4 cut(s)	871, 1119, 1774, 1777
BspHI	TCATGA	1 cut(s)	154
BspLI	GGNNCC	3 cut(s)	272, 919, 1365
BspPI	GGATC	7 cut(s)	238, 378, 623, 756, 1305, 1321, 1529
BspT107I	GGYRCC	1 cut(s)	1363
BsrBI	CCGCTC	1 cut(s)	568
BsrFI	RCCGGY	4 cut(s)	453, 716, 920, 1791
BsrI	ACTGG	6 cut(s)	854, 919, 1044, 1299, 1342, 1346
BssAI	RCCGGY	4 cut(s)	453, 716, 920, 1791
BssECI	CCNNGG	4 cut(s)	768, 1372, 1410, 1711
BssSI	CACGAG	2 cut(s)	711, 1272
BssT1I	CCWWGG	3 cut(s)	768, 1410, 1711
Bst2BI	CACGAG	2 cut(s)	711, 1272
Bst2UI	CCWGG	5 cut(s)	1010, 1190, 1373, 1386, 1425
Bst4CI	ACNGT	9 cut(s)	37, 245, 252, 275, 407, 652, 765, 1474, 1518
Bst6I	CTCTTC	1 cut(s)	846
BstAPI	GCANNNNNTGC	2 cut(s)	1028, 1694
BstC8I	GCNNGC	1 cut(s)	718
BstDEI	CTNAG	4 cut(s)	879, 1127, 1761, 1785
BstDSI	CCRYGG	2 cut(s)	1410, 1711
BstENI	CCTNNNNNAGG	1 cut(s)	843
BstF5I	GGATG	2 cut(s)	508, 933
BstMAI	GTCTC	3 cut(s)	375, 743, 1766
BstMWI	GCNNNNNNNGC	3 cut(s)	1028, 1121, 1694
BstNI	CCWGG	5 cut(s)	1010, 1190, 1373, 1386, 1425
BstSCI	CCNGG	8 cut(s)	417, 1008, 1188, 1265, 1371, 1384, 1423, 1447
BstSFI	CTRYAG	3 cut(s)	1032, 1464, 1482
BstV1I	GCAGC	3 cut(s)	129, 1366, 1672
BstV2I	GAAGAC	1 cut(s)	1445
BstX2I	RGATCY	2 cut(s)	230, 556
BstXI	CCANNNNNNTGG	1 cut(s)	1016
BstYI	RGATCY	2 cut(s)	230, 556
BsuRI	GGCC	3 cut(s)	114, 1140, 1415
BtgI	CCRYGG	2 cut(s)	1410, 1711
BtgZI	GCGATG	1 cut(s)	815
BtrI	CACGTC	2 cut(s)	461, 1570
BtsCI	GGATG	2 cut(s)	508, 933
BtsI	GCAGTG	1 cut(s)	1315
BtsIMutI	CAGTG	5 cut(s)	861, 1124, 1315, 1335, 1353
Cac8I	GCNNGC	1 cut(s)	718
CaiI	CAGNNNCTG	4 cut(s)	626, 878, 1294, 1472
CciI	TCATGA	1 cut(s)	154
Cfr10I	RCCGGY	4 cut(s)	453, 716, 920, 1791
Cfr13I	GGNCC	5 cut(s)	271, 451, 724, 765, 935
CseI	GACGC	1 cut(s)	155
Csp6I	GTAC	4 cut(s)	734, 809, 1404, 1660
CspAI	ACCGGT	1 cut(s)	453
CspCI	CAANNNNNGTGG	2 cut(s)	888, 923
CviAII	CATG	6 cut(s)	155, 203, 209, 1411, 1712, 1753
CviQI	GTAC	4 cut(s)	734, 809, 1404, 1660
DdeI	CTNAG	4 cut(s)	879, 1127, 1761, 1785
EaeI	YGGCCR	1 cut(s)	1138
Eam1104I	CTCTTC	1 cut(s)	846
EarI	CTCTTC	1 cut(s)	846
Eco130I	CCWWGG	3 cut(s)	768, 1410, 1711
Eco47I	GGWCC	5 cut(s)	271, 451, 724, 765, 935
Eco57I	CTGAAG	1 cut(s)	695
EcoNI	CCTNNNNNAGG	1 cut(s)	843
EcoRII	CCWGG	5 cut(s)	1008, 1188, 1371, 1384, 1423
EcoT14I	CCWWGG	3 cut(s)	768, 1410, 1711
ErhI	CCWWGG	3 cut(s)	768, 1410, 1711
Esp3I	CGTCTC	1 cut(s)	743
FaeI	CATG	6 cut(s)	158, 206, 212, 1414, 1715, 1756
FaqI	GGGAC	4 cut(s)	284, 371, 434, 1365
FatI	CATG	6 cut(s)	154, 202, 208, 1410, 1711, 1752
FauI	CCCGC	2 cut(s)	555, 561
FbaI	TGATCA	1 cut(s)	1737
FblI	GTMKAC	1 cut(s)	1342
Fnu4HI	GCNGC	5 cut(s)	115, 118, 1362, 1380, 1686
FokI	GGATG	2 cut(s)	515, 940
Fsp4HI	GCNGC	5 cut(s)	115, 118, 1362, 1380, 1686
FspBI	CTAG	2 cut(s)	954, 1116
GluI	GCNGC	5 cut(s)	115, 118, 1362, 1380, 1686
GsaI	CCCAGC	1 cut(s)	1731
GsuI	CTGGAG	3 cut(s)	123, 210, 936
HaeIII	GGCC	3 cut(s)	114, 1140, 1415
HapII	CCGG	8 cut(s)	121, 418, 454, 717, 921, 1267, 1448, 1792
HgaI	GACGC	1 cut(s)	155
Hin1II	CATG	6 cut(s)	158, 206, 212, 1414, 1715, 1756
HincII	GTYRAC	4 cut(s)	836, 851, 900, 1521
HindII	GTYRAC	4 cut(s)	836, 851, 900, 1521
HinfI	GANTC	3 cut(s)	197, 472, 886
HpaII	CCGG	8 cut(s)	121, 418, 454, 717, 921, 1267, 1448, 1792
HphI	GGTGA	2 cut(s)	874, 1235
Hpy166II	GTNNAC	8 cut(s)	248, 836, 851, 900, 1343, 1521, 1573, 1660
Hpy188I	TCNGA	7 cut(s)	57, 481, 645, 666, 675, 874, 1764
Hpy8I	GTNNAC	8 cut(s)	248, 836, 851, 900, 1343, 1521, 1573, 1660
Hpy99I	CGWCG	2 cut(s)	171, 465
HpyAV	CCTTC	8 cut(s)	424, 430, 436, 442, 541, 670, 1235, 1488
HpyCH4III	ACNGT	9 cut(s)	37, 245, 252, 275, 407, 652, 765, 1474, 1518
HpyCH4IV	ACGT	3 cut(s)	460, 736, 1569
HpyCH4V	TGCA	8 cut(s)	74, 824, 1074, 1124, 1201, 1288, 1382, 1688
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1028, 1121, 1694
HpyF3I	CTNAG	4 cut(s)	879, 1127, 1761, 1785
HpySE526I	ACGT	3 cut(s)	460, 736, 1569
Hsp92II	CATG	6 cut(s)	158, 206, 212, 1414, 1715, 1756
KroI	GCCGGC	1 cut(s)	716
KroNI	GCCGGC	1 cut(s)	718
Ksp22I	TGATCA	1 cut(s)	1737
LmnI	GCTCC	7 cut(s)	163, 565, 917, 950, 1019, 1211, 1376
Lsp1109I	GCAGC	3 cut(s)	129, 1366, 1672
LweI	GCATC	2 cut(s)	787, 1102
MaeI	CTAG	2 cut(s)	954, 1116
MaeII	ACGT	3 cut(s)	460, 736, 1569
MaeIII	GTNAC	9 cut(s)	275, 401, 456, 521, 610, 752, 910, 1180, 1269
MbiI	CCGCTC	1 cut(s)	568
MfeI	CAATTG	2 cut(s)	1142, 1491
MflI	RGATCY	2 cut(s)	230, 556
MlsI	TGGCCA	1 cut(s)	1140
MluCI	AATT	7 cut(s)	1142, 1164, 1278, 1458, 1491, 1545, 1778
MluNI	TGGCCA	1 cut(s)	1140
MlyI	GAGTC	2 cut(s)	206, 481
MmeI	TCCRAC	2 cut(s)	80, 1189
Mox20I	TGGCCA	1 cut(s)	1140
MroNI	GCCGGC	1 cut(s)	716
MroXI	GAANNNNTTC	2 cut(s)	1041, 1587
MscI	TGGCCA	1 cut(s)	1140
MseI	TTAA	2 cut(s)	1167, 1578
MslI	CAYNNNNRTG	3 cut(s)	138, 207, 492
Msp20I	TGGCCA	1 cut(s)	1140
MspA1I	CMGCKG	3 cut(s)	1178, 1361, 1649
MspI	CCGG	8 cut(s)	121, 418, 454, 717, 921, 1267, 1448, 1792
MspR9I	CCNGG	8 cut(s)	419, 1010, 1190, 1267, 1373, 1386, 1425, 1449
MunI	CAATTG	2 cut(s)	1142, 1491
Mva1269I	GAATGC	3 cut(s)	1203, 1267, 1514
MvaI	CCWGG	5 cut(s)	1010, 1190, 1373, 1386, 1425
MwoI	GCNNNNNNNGC	3 cut(s)	1028, 1121, 1694
NaeI	GCCGGC	1 cut(s)	718
NciI	CCSGG	3 cut(s)	419, 1267, 1449
NcoI	CCATGG	2 cut(s)	1410, 1711
NgoMIV	GCCGGC	1 cut(s)	716
NlaIII	CATG	6 cut(s)	158, 206, 212, 1414, 1715, 1756
NlaIV	GGNNCC	3 cut(s)	272, 919, 1365
NmuCI	GTSAC	7 cut(s)	275, 401, 456, 521, 610, 1180, 1269
PagI	TCATGA	1 cut(s)	154
PcsI	WCGNNNNNNNCGW	1 cut(s)	175
PctI	GAATGC	3 cut(s)	1203, 1267, 1514
PdiI	GCCGGC	1 cut(s)	718
PdmI	GAANNNNTTC	2 cut(s)	1041, 1587
PfeI	GAWTC	1 cut(s)	886
PflMI	CCANNNNNTGG	1 cut(s)	944
PinAI	ACCGGT	1 cut(s)	453
PkrI	GCNGC	5 cut(s)	116, 119, 1363, 1381, 1687
PleI	GAGTC	2 cut(s)	205, 480
PpsI	GAGTC	2 cut(s)	205, 480
Psp6I	CCWGG	5 cut(s)	1008, 1188, 1371, 1384, 1423
PspFI	CCCAGC	1 cut(s)	1727
PspGI	CCWGG	5 cut(s)	1008, 1188, 1371, 1384, 1423
PspN4I	GGNNCC	3 cut(s)	272, 919, 1365
PspPI	GGNCC	5 cut(s)	271, 451, 724, 765, 935
PsrI	GAACNNNNNNTAC	4 cut(s)	773, 805, 1026, 1058
PstNI	CAGNNNCTG	4 cut(s)	626, 878, 1294, 1472
PsuI	RGATCY	2 cut(s)	230, 556
PvuII	CAGCTG	1 cut(s)	1178
RsaI	GTAC	4 cut(s)	735, 810, 1405, 1661
RsaNI	GTAC	4 cut(s)	734, 809, 1404, 1660
RseI	CAYNNNNRTG	3 cut(s)	138, 207, 492
SaqAI	TTAA	2 cut(s)	1167, 1578
SatI	GCNGC	5 cut(s)	115, 118, 1362, 1380, 1686
Sau96I	GGNCC	5 cut(s)	271, 451, 724, 765, 935
SchI	GAGTC	2 cut(s)	206, 481
ScrFI	CCNGG	8 cut(s)	419, 1010, 1190, 1267, 1373, 1386, 1425, 1449
SfaNI	GCATC	2 cut(s)	787, 1102
SfcI	CTRYAG	3 cut(s)	1032, 1464, 1482
SinI	GGWCC	5 cut(s)	271, 451, 724, 765, 935
SmiMI	CAYNNNNRTG	3 cut(s)	138, 207, 492
SmlI	CTYRAG	2 cut(s)	757, 1663
SmoI	CTYRAG	2 cut(s)	757, 1663
Sse9I	AATT	7 cut(s)	1142, 1164, 1278, 1458, 1491, 1545, 1778
SsiI	CCGC	5 cut(s)	115, 562, 568, 1361, 1647
SspMI	CTAG	2 cut(s)	954, 1116
StyD4I	CCNGG	8 cut(s)	417, 1008, 1188, 1265, 1371, 1384, 1423, 1447
StyI	CCWWGG	3 cut(s)	768, 1410, 1711
TaaI	ACNGT	9 cut(s)	37, 245, 252, 275, 407, 652, 765, 1474, 1518
TaiI	ACGT	3 cut(s)	463, 739, 1572
TaqI	TCGA	6 cut(s)	9, 379, 463, 844, 1159, 1699
TasI	AATT	7 cut(s)	1142, 1164, 1278, 1458, 1491, 1545, 1778
TatI	WGTACW	1 cut(s)	1659
TauI	GCSGC	2 cut(s)	117, 1364
TfiI	GAWTC	1 cut(s)	886
Tru1I	TTAA	2 cut(s)	1167, 1578
Tru9I	TTAA	2 cut(s)	1167, 1578
TscAI	CASTG	5 cut(s)	861, 1131, 1315, 1342, 1353
TseFI	GTSAC	7 cut(s)	275, 401, 456, 521, 610, 1180, 1269
TseI	GCWGC	3 cut(s)	117, 1379, 1685
Tsp45I	GTSAC	7 cut(s)	275, 401, 456, 521, 610, 1180, 1269
TspDTI	ATGAA	3 cut(s)	519, 1254, 1741
TspGWI	ACGGA	1 cut(s)	716
TspRI	CASTG	5 cut(s)	861, 1131, 1315, 1342, 1353
Van91I	CCANNNNNTGG	1 cut(s)	944
VpaK11BI	GGWCC	5 cut(s)	271, 451, 724, 765, 935
XagI	CCTNNNNNAGG	1 cut(s)	843
XapI	RAATTY	2 cut(s)	1458, 1778
XmiI	GTMKAC	1 cut(s)	1342
XmnI	GAANNNNTTC	2 cut(s)	1041, 1587
XspI	CTAG	2 cut(s)	954, 1116

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.