Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0007651

Physical Location & Seq

Genomic Coordinates Reverse (-)

15351073 .. 15358951

Gene Structure 7879 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g11800.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1809 bp

ATGGATTTTGACGAGTATGATTATTTAGAGAAAACAGTTGAAAATCCTGAACCACCGAAATCAAAGGAAACTGCAAATGGTGGTGAGGAAACATTGAAATCTGGAGAGAAAGGTCGCAGCCGAAGTTCAAAGCACAAAGGTGACGAGAAAGGTCACGATGAGGAACGTCACTCAAAGCGCTCAAAATCTGGAGACGAGTCACGTGAACGTGATAATGATCGACACAGAGAGAGGGGATCTTCTCATCACCGCTCACAGTCAAGAGACAGAGAAAAGGATCGCCACAGAAGTAGCCGGGATCATAGAGGTAGAGAAGACAGAGAAAGGGAGGAAAGAAATGGTAAGGAGAGAGATAGGGAAAGAGACAAAGAGCGGGATCCTGGTCGTGATAGAGACAGGAGAGAACGTGACCGTGAGGGTGACAGGGACCGGGAGAAGGAAAAAGAGCGGTCACGTCGAAGCAGGAGCCATTCAGAAAGGCATCGAAGTGATCGATCGTATGAAAGAGAAAGGAGCCGGGAGGTGGAGCATAAAGAAAGAGACAAGGAGAAGGATTTGAGGGAGCGGGAAAAAGAAAATAGAAGACATAAAGACAAAAAGGAAGAAGGGACGGAACCAGAGGCTGATCCTGAAAGAGATCAGAGGACAGTATTTGCGTATCAGATTTGTCTGAAGGCAGATGAAAGAGATGTATATGAATTCTTCTCAAGGGCCGGAAAGGTCCGCGATGTACGTCTTATTATGGACCGCAATTCAAGACGTTCAAAGGGAGTTGGGTATATTGAGTTTTATGATGCGATGTCAGTACCTATGGCAATCGCACTCTCTGGTCAGCCTCTTCTTGGTCAACCAGTGATGGTGAAGCCATCAGAGGCTGAGAAGAATCTAGTTCAGTCAACGACATCTGTTGTCACTGGACCAGGTGGGATGATAGGCCCATATTCTGGTGGAGCTAGAAGGCTGTATGTTGGAAATCTCCATAGCAATATAAAAGAAGATGATCTCCGCCAGGTTTTTGGAGCATTTGGTCCTGTAGAACTGGTTCAGTTGCCTCTTGATGAAACTAATAACTGCAAAGGTTTTGGATTTGTGCAGTTTGCACGTCTTGAAGATGCTAGAAATTCTCTGAGTTTGAATGGACAATTGGAGATTGCAGGTCGAGTAATTAAGGTGTCGGCTGTTACAGACCAAGCTGGAATGCAAGATCTTGGAGCAAATGCTGGTGATTTTGATGATGATGAAGGCGGTGGCTTGGCATTGAATGCGCGCTCTCGAGCCATGCTTATGCAGAAATTGGACCGTAGTGGAACTGCACCAAGTATTGCTGGTCCCTTAGGCACACCCGCTGTCAATAGCGCAGGCGTTTCCTTACCGATGGCACCAATCCTGGGAGCTGCACCGGTGGTTTCTTCTCTTGTTCCTCCCATTGCCTCTATTCCTGGTTTTGCCGGACTTGGTGTTGCAGGGCTTCAAATTCCAGCAGCTACTCTTCCTTCTGTAGATACAATTGGTGTTCCAAGCGAATGTTTACTGTTGAAAAATATGTTTGATCCCACAGCTGAGTCGGAACCAAACTTTGACTTGGACATTAAAGATGATGTTCAGGAGGAGTGTTCAAAATACGGGACTTTGAAGCATATATATGTGGACAAGAATACTGCTGGACATGTGTACTTGCGATTTGAAAATACACAAGCTGCTATTAGTGCTCGGCATGTTCTCCATGGAAGGTGGTTTGCTGGAAAGATGATCGAGGCAACGTTCATGTTGCCCCAGACGTACGAGGCTAAATTCCCGGAAAGCAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0016604 GO:0016607 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RBM39linker RRM_1

Protein Analysis

603

Amino Acids

67.92

Weight (kDa)

6.54

Isoelectric Point (pI)

53.77

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007651)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16940 AT2G16940 AT2G16940 AT2G16940 AT2G16940
fragaria_vesca	FvH4_2g15540
malus_domestica	MD05G1123800.v1.1 MD10G1126500.v1.1
prunus_persica	Prupe.8G167600_v2.0.a1 Prupe.8G167800_v2.0.a1 Prupe.8G167800_v2.0.a1 Prupe.8G167800_v2.0.a1
pyrus_communis	pycom05g11800
rosa_chinensis	RchiOBHm_Chr6g0278711
rosa_laevigata	RLG00000013199
rosa_multiflora	Rmu_sc0000531.1_g000006
rosa_roxburghii	Rroxscaffold_7G00189690 Rroxscaffold_7G00189950
rosa_rugosa	Rorug06G0118400
rosa_samantha	Rh6AG227200 Rh6BG232600 Rh6CG234800 Rh6DG226400
rosa_wichuraiana	Rw6G019930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1145
AccB1I	GGYRCC	1 cut(s)	1378
AccB7I	CCANNNNNTGG	1 cut(s)	944
AccBSI	CCGCTC	4 cut(s)	252, 373, 448, 565
AccII	CGCG	2 cut(s)	726, 1267
AciI	CCGC	9 cut(s)	250, 373, 448, 565, 724, 748, 1006, 1245, 1344
AclI	AACGTT	1 cut(s)	1760
AclWI	GGATC	7 cut(s)	244, 285, 306, 371, 384, 620, 1544
AcsI	RAATTY	4 cut(s)	698, 1120, 1473, 1790
AcuI	CTGAAG	1 cut(s)	692
AcvI	CACGTG	1 cut(s)	203
AfaI	GTAC	4 cut(s)	732, 807, 1673, 1781
AfeI	AGCGCT	1 cut(s)	179
AfiI	CCNNNNNNNGG	5 cut(s)	436, 523, 842, 944, 1388
AflIII	ACRYGT	1 cut(s)	1666
AgeI	ACCGGT	1 cut(s)	1399
AjiI	CACGTC	2 cut(s)	455, 1103
AjnI	CCWGG	5 cut(s)	379, 919, 1008, 1386, 1438
AjuI	GAANNNNNNNTTGG	2 cut(s)	1127, 1159
AleI	CACNNNNGTG	1 cut(s)	138
AluBI	AGCT	6 cut(s)	953, 1193, 1394, 1484, 1559, 1697
AluI	AGCT	6 cut(s)	953, 1193, 1394, 1484, 1559, 1697
Alw21I	GWGCWC	1 cut(s)	1711
Alw26I	GTCTC	5 cut(s)	186, 258, 357, 387, 534
AlwI	GGATC	7 cut(s)	244, 285, 306, 371, 384, 620, 1544
AlwNI	CAGNNNCTG	2 cut(s)	623, 875
Ama87I	CYCGRG	1 cut(s)	1272
Aor51HI	AGCGCT	1 cut(s)	179
AoxI	GGCC	2 cut(s)	711, 934
ApeKI	GCWGC	4 cut(s)	117, 1394, 1481, 1697
ApoI	RAATTY	4 cut(s)	698, 1120, 1473, 1790
AsiGI	ACCGGT	1 cut(s)	1399
Asp700I	GAANNNNTTC	1 cut(s)	1041
AspLEI	GCGC	4 cut(s)	180, 1267, 1269, 1358
AspS9I	GGNCC	9 cut(s)	427, 711, 721, 745, 917, 935, 1028, 1297, 1328
AsuC2I	CCSGG	4 cut(s)	296, 431, 518, 1796
AsuHPI	GGTGA	6 cut(s)	95, 152, 239, 431, 871, 1235
AvaI	CYCGRG	1 cut(s)	1272
AvaII	GGWCC	7 cut(s)	427, 721, 745, 917, 1028, 1297, 1328
AxyI	CCTNAGG	1 cut(s)	1333
BamHI	GGATCC	1 cut(s)	376
BanI	GGYRCC	1 cut(s)	1378
BbrPI	CACGTG	1 cut(s)	203
BbsI	GAAGAC	2 cut(s)	321, 589
Bbv12I	GWGCWC	1 cut(s)	1711
BbvI	GCAGC	4 cut(s)	129, 1381, 1493, 1684
BccI	CCATC	3 cut(s)	850, 874, 1369
BciT130I	CCWGG	5 cut(s)	381, 921, 1010, 1388, 1440
BcnI	CCSGG	4 cut(s)	296, 431, 518, 1796
BcoDI	GTCTC	5 cut(s)	186, 258, 357, 387, 534
BfaI	CTAG	3 cut(s)	887, 954, 1116
BfmI	CTRYAG	2 cut(s)	1032, 1497
BfoI	RGCGCY	1 cut(s)	181
BfuAI	ACCTGC	1 cut(s)	1145
BglII	AGATCT	1 cut(s)	1204
BisI	GCNGC	4 cut(s)	118, 1395, 1482, 1698
BlsI	GCNGC	4 cut(s)	119, 1396, 1483, 1699
Bme1390I	CCNGG	9 cut(s)	296, 381, 431, 518, 921, 1010, 1388, 1440, 1796
Bme18I	GGWCC	7 cut(s)	427, 721, 745, 917, 1028, 1297, 1328
BmeT110I	CYCGRG	1 cut(s)	1272
BmgBI	CACGTC	2 cut(s)	455, 1103
BmgT120I	GGNCC	9 cut(s)	427, 711, 721, 745, 917, 935, 1028, 1297, 1328
BmiI	GGNNCC	8 cut(s)	378, 428, 467, 515, 615, 1330, 1380, 1569
BmrFI	CCNGG	9 cut(s)	296, 381, 431, 518, 921, 1010, 1388, 1440, 1796
BmsI	GCATC	3 cut(s)	490, 784, 1102
BpiI	GAAGAC	2 cut(s)	321, 589
BpmI	CTGGAG	2 cut(s)	123, 210
BpuEI	CTTGAG	1 cut(s)	691
BpuMI	CCSGG	4 cut(s)	296, 431, 518, 1796
Bsa29I	ATCGAT	1 cut(s)	493
BsaAI	YACGTR	1 cut(s)	203
BsaBI	GATNNNNATC	1 cut(s)	216
BsaJI	CCNNGG	2 cut(s)	1387, 1723
BsaWI	WCCGGW	1 cut(s)	1399
BsaXI	ACNNNNNCTCC	2 cut(s)	391, 421
Bsc4I	CCNNNNNNNGG	5 cut(s)	436, 523, 842, 944, 1388
Bse118I	RCCGGY	1 cut(s)	1399
Bse1I	ACTGG	3 cut(s)	851, 919, 1044
Bse21I	CCTNAGG	1 cut(s)	1333
Bse3DI	GCAATG	1 cut(s)	1425
Bse8I	GATNNNNATC	1 cut(s)	216
BseBI	CCWGG	5 cut(s)	381, 921, 1010, 1388, 1440
BseCI	ATCGAT	1 cut(s)	493
BseDI	CCNNGG	2 cut(s)	1387, 1723
BseGI	GGATG	1 cut(s)	933
BseJI	GATNNNNATC	1 cut(s)	216
BseLI	CCNNNNNNNGG	5 cut(s)	436, 523, 842, 944, 1388
BseMI	GCAATG	1 cut(s)	1425
BseMII	CTCAG	3 cut(s)	867, 1118, 1551
BseNI	ACTGG	3 cut(s)	851, 919, 1044
BsePI	GCGCGC	1 cut(s)	1265
BseRI	GAGGAG	1 cut(s)	1622
BseXI	GCAGC	4 cut(s)	129, 1381, 1493, 1684
BsgI	GTGCAG	3 cut(s)	1112, 1296, 1380
Bsh1236I	CGCG	2 cut(s)	726, 1267
Bsh1285I	CGRYCG	1 cut(s)	497
BshFI	GGCC	2 cut(s)	713, 936
BshNI	GGYRCC	1 cut(s)	1378
BshTI	ACCGGT	1 cut(s)	1399
BshVI	ATCGAT	1 cut(s)	493
BsiEI	CGRYCG	1 cut(s)	497
BsiHKAI	GWGCWC	1 cut(s)	1711
BsiHKCI	CYCGRG	1 cut(s)	1272
BsiSI	CCGG	7 cut(s)	295, 430, 517, 714, 1400, 1449, 1796
BsiWI	CGTACG	1 cut(s)	1779
BslFI	GGGAC	4 cut(s)	440, 622, 1314, 1639
BslI	CCNNNNNNNGG	5 cut(s)	436, 523, 842, 944, 1388
BsmAI	GTCTC	5 cut(s)	186, 258, 357, 387, 534
BsmBI	CGTCTC	1 cut(s)	186
BsmFI	GGGAC	4 cut(s)	440, 622, 1314, 1639
BsmI	GAATGC	2 cut(s)	1203, 1267
BsnI	GGCC	2 cut(s)	713, 936
BsoBI	CYCGRG	1 cut(s)	1272
Bsp1286I	GDGCHC	1 cut(s)	1711
Bsp19I	CCATGG	1 cut(s)	1723
BspACI	CCGC	9 cut(s)	250, 373, 448, 565, 724, 748, 1006, 1245, 1344
BspANI	GGCC	2 cut(s)	713, 936
BspCNI	CTCAG	3 cut(s)	868, 1119, 1552
BspDI	ATCGAT	1 cut(s)	493
BspFNI	CGCG	2 cut(s)	726, 1267
BspLI	GGNNCC	8 cut(s)	378, 428, 467, 515, 615, 1330, 1380, 1569
BspMI	ACCTGC	1 cut(s)	1145
BspPI	GGATC	7 cut(s)	244, 285, 306, 371, 384, 620, 1544
BspT107I	GGYRCC	1 cut(s)	1378
BsrBI	CCGCTC	4 cut(s)	252, 373, 448, 565
BsrDI	GCAATG	1 cut(s)	1425
BsrFI	RCCGGY	1 cut(s)	1399
BsrI	ACTGG	3 cut(s)	851, 919, 1044
BssAI	RCCGGY	1 cut(s)	1399
BssECI	CCNNGG	2 cut(s)	1387, 1723
BssHII	GCGCGC	1 cut(s)	1265
BssT1I	CCWWGG	1 cut(s)	1723
Bst2UI	CCWGG	5 cut(s)	381, 921, 1010, 1388, 1440
Bst4CI	ACNGT	6 cut(s)	37, 258, 413, 649, 1301, 1533
Bst6I	CTCTTC	2 cut(s)	843, 1494
BstAPI	GCANNNNNTGC	1 cut(s)	1262
BstBAI	YACGTR	1 cut(s)	203
BstC8I	GCNNGC	2 cut(s)	1267, 1360
BstDEI	CTNAG	4 cut(s)	876, 1127, 1333, 1560
BstDSI	CCRYGG	1 cut(s)	1723
BstF5I	GGATG	1 cut(s)	933
BstFNI	CGCG	2 cut(s)	726, 1267
BstH2I	RGCGCY	1 cut(s)	181
BstHHI	GCGC	4 cut(s)	180, 1267, 1269, 1358
BstMAI	GTCTC	5 cut(s)	186, 258, 357, 387, 534
BstMCI	CGRYCG	1 cut(s)	497
BstMWI	GCNNNNNNNGC	2 cut(s)	1262, 1706
BstNI	CCWGG	5 cut(s)	381, 921, 1010, 1388, 1440
BstNSI	RCATGY	2 cut(s)	1670, 1718
BstSCI	CCNGG	9 cut(s)	294, 379, 429, 516, 919, 1008, 1386, 1438, 1794
BstSFI	CTRYAG	2 cut(s)	1032, 1497
BstUI	CGCG	2 cut(s)	726, 1267
BstV1I	GCAGC	4 cut(s)	129, 1381, 1493, 1684
BstV2I	GAAGAC	2 cut(s)	321, 589
BstX2I	RGATCY	3 cut(s)	236, 376, 1204
BstXI	CCANNNNNNTGG	1 cut(s)	1016
BstYI	RGATCY	3 cut(s)	236, 376, 1204
Bsu15I	ATCGAT	1 cut(s)	493
Bsu36I	CCTNAGG	1 cut(s)	1333
BsuRI	GGCC	2 cut(s)	713, 936
BsuTUI	ATCGAT	1 cut(s)	493
BtgI	CCRYGG	1 cut(s)	1723
BtgZI	GCGATG	2 cut(s)	741, 812
BtrI	CACGTC	2 cut(s)	455, 1103
BtsCI	GGATG	1 cut(s)	933
BtsIMutI	CAGTG	2 cut(s)	858, 912
BveI	ACCTGC	1 cut(s)	1145
Cac8I	GCNNGC	2 cut(s)	1267, 1360
CaiI	CAGNNNCTG	2 cut(s)	623, 875
CfoI	GCGC	4 cut(s)	180, 1267, 1269, 1358
Cfr10I	RCCGGY	1 cut(s)	1399
Cfr13I	GGNCC	9 cut(s)	427, 711, 721, 745, 917, 935, 1028, 1297, 1328
ClaI	ATCGAT	1 cut(s)	493
CsiI	ACCWGGT	1 cut(s)	919
Csp6I	GTAC	4 cut(s)	731, 806, 1672, 1780
CspAI	ACCGGT	1 cut(s)	1399
CviAII	CATG	5 cut(s)	1279, 1667, 1715, 1724, 1765
CviQI	GTAC	4 cut(s)	731, 806, 1672, 1780
DdeI	CTNAG	4 cut(s)	876, 1127, 1333, 1560
Eam1104I	CTCTTC	2 cut(s)	843, 1494
EarI	CTCTTC	2 cut(s)	843, 1494
EciI	GGCGGA	1 cut(s)	995
Eco130I	CCWWGG	1 cut(s)	1723
Eco47I	GGWCC	7 cut(s)	427, 721, 745, 917, 1028, 1297, 1328
Eco47III	AGCGCT	1 cut(s)	179
Eco57I	CTGAAG	1 cut(s)	692
Eco72I	CACGTG	1 cut(s)	203
Eco81I	CCTNAGG	1 cut(s)	1333
Eco88I	CYCGRG	1 cut(s)	1272
EcoRI	GAATTC	1 cut(s)	698
EcoRII	CCWGG	5 cut(s)	379, 919, 1008, 1386, 1438
EcoT14I	CCWWGG	1 cut(s)	1723
ErhI	CCWWGG	1 cut(s)	1723
Esp3I	CGTCTC	1 cut(s)	186
FaeI	CATG	5 cut(s)	1282, 1670, 1718, 1727, 1768
FaqI	GGGAC	4 cut(s)	440, 622, 1314, 1639
FatI	CATG	5 cut(s)	1278, 1666, 1714, 1723, 1764
FauI	CCCGC	3 cut(s)	366, 558, 1351
Fnu4HI	GCNGC	4 cut(s)	118, 1395, 1482, 1698
FokI	GGATG	1 cut(s)	940
Fsp4HI	GCNGC	4 cut(s)	118, 1395, 1482, 1698
FspBI	CTAG	3 cut(s)	887, 954, 1116
GlaI	GCGC	4 cut(s)	179, 1266, 1268, 1357
GluI	GCNGC	4 cut(s)	118, 1395, 1482, 1698
GsuI	CTGGAG	2 cut(s)	123, 210
HaeII	RGCGCY	1 cut(s)	181
HaeIII	GGCC	2 cut(s)	713, 936
HapII	CCGG	7 cut(s)	295, 430, 517, 714, 1400, 1449, 1796
HhaI	GCGC	4 cut(s)	180, 1267, 1269, 1358
Hin1II	CATG	5 cut(s)	1282, 1670, 1718, 1727, 1768
Hin6I	GCGC	4 cut(s)	178, 1265, 1267, 1356
HinP1I	GCGC	4 cut(s)	178, 1265, 1267, 1356
HincII	GTYRAC	2 cut(s)	848, 897
HindII	GTYRAC	2 cut(s)	848, 897
HinfI	GANTC	3 cut(s)	197, 883, 1562
HpaII	CCGG	7 cut(s)	295, 430, 517, 714, 1400, 1449, 1796
HphI	GGTGA	6 cut(s)	95, 152, 239, 431, 871, 1235
Hpy166II	GTNNAC	6 cut(s)	206, 848, 897, 1529, 1648, 1672
Hpy188I	TCNGA	7 cut(s)	475, 642, 663, 672, 871, 1128, 1567
Hpy8I	GTNNAC	6 cut(s)	206, 848, 897, 1529, 1648, 1672
Hpy99I	CGWCG	1 cut(s)	459
HpyAV	CCTTC	8 cut(s)	430, 544, 599, 667, 951, 1235, 1503, 1722
HpyCH4III	ACNGT	6 cut(s)	37, 258, 413, 649, 1301, 1533
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1262, 1706
HpyF3I	CTNAG	4 cut(s)	876, 1127, 1333, 1560
Hsp92II	CATG	5 cut(s)	1282, 1670, 1718, 1727, 1768
HspAI	GCGC	4 cut(s)	178, 1265, 1267, 1356
LmnI	GCTCC	8 cut(s)	465, 513, 526, 562, 950, 1019, 1211, 1391
Lsp1109I	GCAGC	4 cut(s)	129, 1381, 1493, 1684
LweI	GCATC	3 cut(s)	490, 784, 1102
MabI	ACCWGGT	1 cut(s)	919
MaeI	CTAG	3 cut(s)	887, 954, 1116
MaeIII	GTNAC	9 cut(s)	140, 152, 167, 198, 407, 419, 450, 910, 1180
MbiI	CCGCTC	4 cut(s)	252, 373, 448, 565
MfeI	CAATTG	2 cut(s)	1142, 1506
MflI	RGATCY	3 cut(s)	236, 376, 1204
MhlI	GDGCHC	1 cut(s)	1711
MluCI	AATT	9 cut(s)	698, 751, 1120, 1142, 1164, 1292, 1473, 1506, 1790
MlyI	GAGTC	2 cut(s)	206, 1571
MmeI	TCCRAC	2 cut(s)	949, 1545
MroXI	GAANNNNTTC	1 cut(s)	1041
MseI	TTAA	2 cut(s)	1167, 1590
MslI	CAYNNNNRTG	4 cut(s)	138, 486, 1283, 1641
MspA1I	CMGCKG	2 cut(s)	1346, 1559
MspI	CCGG	7 cut(s)	295, 430, 517, 714, 1400, 1449, 1796
MspR9I	CCNGG	9 cut(s)	296, 381, 431, 518, 921, 1010, 1388, 1440, 1796
MunI	CAATTG	2 cut(s)	1142, 1506
Mva1269I	GAATGC	2 cut(s)	1203, 1267
MvaI	CCWGG	5 cut(s)	381, 921, 1010, 1388, 1440
MvnI	CGCG	2 cut(s)	726, 1267
MwoI	GCNNNNNNNGC	2 cut(s)	1262, 1706
NciI	CCSGG	4 cut(s)	296, 431, 518, 1796
NcoI	CCATGG	1 cut(s)	1723
NlaIII	CATG	5 cut(s)	1282, 1670, 1718, 1727, 1768
NlaIV	GGNNCC	8 cut(s)	378, 428, 467, 515, 615, 1330, 1380, 1569
NmeAIII	GCCGAG	1 cut(s)	1690
NmuCI	GTSAC	8 cut(s)	140, 152, 167, 198, 407, 419, 450, 910
NspI	RCATGY	2 cut(s)	1670, 1718
OliI	CACNNNNGTG	1 cut(s)	138
PaeR7I	CTCGAG	1 cut(s)	1272
PauI	GCGCGC	1 cut(s)	1265
PciI	ACATGT	1 cut(s)	1666
PcsI	WCGNNNNNNNCGW	1 cut(s)	490
PctI	GAATGC	2 cut(s)	1203, 1267
PdmI	GAANNNNTTC	1 cut(s)	1041
PfeI	GAWTC	1 cut(s)	883
Pfl23II	CGTACG	1 cut(s)	1779
PflMI	CCANNNNNTGG	1 cut(s)	944
PfoI	TCCNGGA	1 cut(s)	1794
PinAI	ACCGGT	1 cut(s)	1399
PkrI	GCNGC	4 cut(s)	119, 1396, 1483, 1699
Ple19I	CGATCG	1 cut(s)	497
PleI	GAGTC	2 cut(s)	205, 1570
PmaCI	CACGTG	1 cut(s)	203
PmlI	CACGTG	1 cut(s)	203
PpsI	GAGTC	2 cut(s)	205, 1570
Ppu21I	YACGTR	1 cut(s)	203
PscI	ACATGT	1 cut(s)	1666
Psp1406I	AACGTT	1 cut(s)	1760
Psp6I	CCWGG	5 cut(s)	379, 919, 1008, 1386, 1438
PspCI	CACGTG	1 cut(s)	203
PspGI	CCWGG	5 cut(s)	379, 919, 1008, 1386, 1438
PspLI	CGTACG	1 cut(s)	1779
PspN4I	GGNNCC	8 cut(s)	378, 428, 467, 515, 615, 1330, 1380, 1569
PspPI	GGNCC	9 cut(s)	427, 711, 721, 745, 917, 935, 1028, 1297, 1328
PsrI	GAACNNNNNNTAC	2 cut(s)	1026, 1058
PstNI	CAGNNNCTG	2 cut(s)	623, 875
PsuI	RGATCY	3 cut(s)	236, 376, 1204
PteI	GCGCGC	1 cut(s)	1265
PvuI	CGATCG	1 cut(s)	497
PvuII	CAGCTG	1 cut(s)	1559
RsaI	GTAC	4 cut(s)	732, 807, 1673, 1781
RsaNI	GTAC	4 cut(s)	731, 806, 1672, 1780
RseI	CAYNNNNRTG	4 cut(s)	138, 486, 1283, 1641
SaqAI	TTAA	2 cut(s)	1167, 1590
SatI	GCNGC	4 cut(s)	118, 1395, 1482, 1698
Sau96I	GGNCC	9 cut(s)	427, 711, 721, 745, 917, 935, 1028, 1297, 1328
SchI	GAGTC	2 cut(s)	206, 1571
ScrFI	CCNGG	9 cut(s)	296, 381, 431, 518, 921, 1010, 1388, 1440, 1796
SduI	GDGCHC	1 cut(s)	1711
SexAI	ACCWGGT	1 cut(s)	919
SfaNI	GCATC	3 cut(s)	490, 784, 1102
SfcI	CTRYAG	2 cut(s)	1032, 1497
Sfr274I	CTCGAG	1 cut(s)	1272
SgrAI	CRCCGGYG	1 cut(s)	1399
SinI	GGWCC	7 cut(s)	427, 721, 745, 917, 1028, 1297, 1328
SlaI	CTCGAG	1 cut(s)	1272
SmiMI	CAYNNNNRTG	4 cut(s)	138, 486, 1283, 1641
SmlI	CTYRAG	2 cut(s)	706, 1272
SmoI	CTYRAG	2 cut(s)	706, 1272
Sse9I	AATT	9 cut(s)	698, 751, 1120, 1142, 1164, 1292, 1473, 1506, 1790
SsiI	CCGC	9 cut(s)	250, 373, 448, 565, 724, 748, 1006, 1245, 1344
SspMI	CTAG	3 cut(s)	887, 954, 1116
StyD4I	CCNGG	9 cut(s)	294, 379, 429, 516, 919, 1008, 1386, 1438, 1794
StyI	CCWWGG	1 cut(s)	1723
TaaI	ACNGT	6 cut(s)	37, 258, 413, 649, 1301, 1533
TaqI	TCGA	7 cut(s)	220, 457, 484, 493, 1159, 1273, 1752
TasI	AATT	9 cut(s)	698, 751, 1120, 1142, 1164, 1292, 1473, 1506, 1790
TatI	WGTACW	1 cut(s)	1671
TfiI	GAWTC	1 cut(s)	883
Tru1I	TTAA	2 cut(s)	1167, 1590
Tru9I	TTAA	2 cut(s)	1167, 1590
TscAI	CASTG	2 cut(s)	858, 919
TseFI	GTSAC	8 cut(s)	140, 152, 167, 198, 407, 419, 450, 910
TseI	GCWGC	4 cut(s)	117, 1394, 1481, 1697
Tsp45I	GTSAC	8 cut(s)	140, 152, 167, 198, 407, 419, 450, 910
TspDTI	ATGAA	6 cut(s)	516, 696, 711, 1074, 1254, 1753
TspGWI	ACGGA	1 cut(s)	626
TspRI	CASTG	2 cut(s)	858, 919
Van91I	CCANNNNNTGG	1 cut(s)	944
VpaK11BI	GGWCC	7 cut(s)	427, 721, 745, 917, 1028, 1297, 1328
XapI	RAATTY	4 cut(s)	698, 1120, 1473, 1790
XceI	RCATGY	2 cut(s)	1670, 1718
XhoI	CTCGAG	1 cut(s)	1272
XmnI	GAANNNNTTC	1 cut(s)	1041
XspI	CTAG	3 cut(s)	887, 954, 1116

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.