AT2G17530
ERF Family

belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
7626325 .. 7629149
2825 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G17530.1

Sequence Viewer

Length: 1323 bp
ATGTCGTGTTCATCCTCATCTGGATCAGAGGAAGACGATGAGGGTTTCGATGCTTACCGTAAAGGTGGATATCACGCCGTTAGAATCGGAGACCAGTTTGCCGGTGGCCGTTACATTGCTCAGAGAAAGCTTGGTTGGGGCCAATTCTCCACCGTTTGGCTTGCCTATGATACTCGCACTTCTAATTATGTTGCTTTGAAGATTCAGAAGAGCGCCTTACAATTTGCTCAAGCTGCACTTCATGAAATCGAACTTCTTCAAGCTGCTGCTGATGGGGATCCTGAAAATACCAAGTGTGTTATTCGTCTTATTGATGACTTCAAGCACGCAGGTCCCAACGGGCAGCATTTATGCATGGTGCTCGAGTTTCTTGGCGATAGCTTGCTGCGTTTGATTAAATATAACCGTTATAAAGGGATGGAGTTAAGTAAAGTGCGGGAGATATGCAAATGTATACTGACTGGTCTAGATTATTTGCACCGTGAACTCGGTATGATTCACTCCGACTTAAAACCCGAAAACATTCTTCTTTGTTCCACCATTGACCCTGCCAAGGATCCTATCAGATCCGGACTAACACCGATACTAGAAAAGCCCGAGGGGAACCAAAACGGTACATCAACAATGAATCTGATTGAGAAGAAGTTGAAGAGGAGAGCAAAAAAAGCGGCTGCTAAAATATCAGGAAGAAGAGTTTCGATAGTAGGTTTAAGTGAAACACCGAAAAAGAACAAGAGAAACTTGGATGGGATTGATATGAGATGCAAAGTTGTCGACTTCGGGAACGGGTGTTGGGCTGATAACAAATTTGCAGAAGAAATACAAACAAGACAGTACAGAGCTCCTGAAGTAATACTTCAGTCAGGTTACTCTTACTCTGTTGATATGTGGTCTTTCGCTTGTACTGCTTTTGAGCTTGCTACAGGCGATATGCTTTTCGCTCCAAAAGAGGGAAATGGTTACGGAGAAGACGAGGACCACCTTGCTCTTATGATGGAACTCTTAGGAAAAATGCCTCGAAAGATTGCCATTGGAGGTGCGAGATCAAAGGATTACTTTGACAGACACGGCGACTTGAAGAGGATCCGGAGATTAAAATACTGGCCACTCGACCGTTTACTGATTGATAAATACAAGCTTCCAGAAGCAGAAGCACGAGAATTTGCGGATTTTCTCTGCCCGATAATGGATTTTGCACCTGAGAAACGACCAACTGCACAACAATGTCTGCAACATCCATGGTTGAATCTAAGGACACAGAACAATGAAGATGATATAGAAGGTCAGATGAGTAACATGCAGATCAAAGGTTCATGTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

440

Amino Acids

49.73

Weight (kDa)

8.14

Isoelectric Point (pI)

40.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 39 - 178 1.1e-20 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 41 - 179 3.8e-08 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 254 - 415 2.6e-20 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 411
Acc36I ACCTGC 1 cut(s) 320
AccB7I CCANNNNNTGG 1 cut(s) 156
AccI GTMKAC 2 cut(s) 454, 774
AccIII TCCGGA 2 cut(s) 569, 1086
AciI CCGC 3 cut(s) 436, 668, 1166
AclWI GGATC 8 cut(s) 31, 272, 285, 551, 561, 564, 1078, 1091
AcoI YGGCCR 2 cut(s) 106, 1103
AcsI RAATTY 2 cut(s) 806, 1160
AcuI CTGAAG 2 cut(s) 842, 867
AfaI GTAC 3 cut(s) 616, 836, 904
AfiI CCNNNNNNNGG 4 cut(s) 156, 553, 950, 1186
AgsI TTSAA 6 cut(s) 199, 260, 322, 649, 1078, 1246
AjuI GAANNNNNNNTTGG 2 cut(s) 118, 150
AluBI AGCT 7 cut(s) 130, 233, 263, 381, 842, 916, 1138
AluI AGCT 7 cut(s) 130, 233, 263, 381, 842, 916, 1138
Alw21I GWGCWC 2 cut(s) 363, 844
Alw26I GTCTC 1 cut(s) 84
AlwI GGATC 8 cut(s) 31, 272, 285, 551, 561, 564, 1078, 1091
Ama87I CYCGRG 2 cut(s) 362, 596
Aor13HI TCCGGA 2 cut(s) 569, 1086
AoxI GGCC 3 cut(s) 106, 139, 1103
ApeKI GCWGC 6 cut(s) 233, 263, 266, 343, 385, 671
ApoI RAATTY 2 cut(s) 806, 1160
Asp700I GAANNNNTTC 3 cut(s) 255, 522, 694
AspLEI GCGC 1 cut(s) 215
AspS9I GGNCC 3 cut(s) 139, 332, 976
AvaI CYCGRG 2 cut(s) 362, 596
AvaII GGWCC 2 cut(s) 332, 976
BalI TGGCCA 1 cut(s) 1105
BamHI GGATCC 3 cut(s) 277, 556, 1083
BanII GRGCYC 1 cut(s) 844
BauI CACGAG 1 cut(s) 1155
BbsI GAAGAC 2 cut(s) 39, 975
Bbv12I GWGCWC 2 cut(s) 363, 844
BbvI GCAGC 6 cut(s) 220, 250, 253, 355, 372, 658
BccI CCATC 4 cut(s) 266, 412, 740, 988
BceAI ACGGC 3 cut(s) 62, 93, 1084
BcgI CGANNNNNNTGC 4 cut(s) 343, 377, 754, 788
BcoDI GTCTC 1 cut(s) 84
BfaI CTAG 2 cut(s) 467, 587
BfmI CTRYAG 1 cut(s) 921
BfoI RGCGCY 1 cut(s) 216
BfuAI ACCTGC 1 cut(s) 320
BisI GCNGC 7 cut(s) 234, 264, 267, 344, 386, 669, 672
BlsI GCNGC 7 cut(s) 235, 265, 268, 345, 387, 670, 673
Bme18I GGWCC 2 cut(s) 332, 976
BmeT110I CYCGRG 2 cut(s) 362, 596
BmgT120I GGNCC 3 cut(s) 139, 332, 976
BmiI GGNNCC 6 cut(s) 140, 279, 334, 558, 605, 1085
BmsI GCATC 2 cut(s) 40, 752
BpiI GAAGAC 2 cut(s) 39, 975
BpuEI CTTGAG 1 cut(s) 213
BsaBI GATNNNNATC 1 cut(s) 276
BsaI GGTCTC 1 cut(s) 84
BsaJI CCNNGG 3 cut(s) 552, 597, 1238
BsaWI WCCGGW 2 cut(s) 569, 1086
Bsc4I CCNNNNNNNGG 4 cut(s) 156, 553, 950, 1186
Bse118I RCCGGY 1 cut(s) 101
Bse1I ACTGG 3 cut(s) 94, 466, 1106
Bse3DI GCAATG 1 cut(s) 114
Bse8I GATNNNNATC 1 cut(s) 276
BseAI TCCGGA 2 cut(s) 569, 1086
BseDI CCNNGG 3 cut(s) 552, 597, 1238
BseGI GGATG 4 cut(s) 11, 423, 751, 1234
BseJI GATNNNNATC 1 cut(s) 276
BseLI CCNNNNNNNGG 4 cut(s) 156, 553, 950, 1186
BseMI GCAATG 1 cut(s) 114
BseMII CTCAG 2 cut(s) 134, 1191
BseNI ACTGG 3 cut(s) 94, 466, 1106
BseRI GAGGAG 1 cut(s) 667
BseXI GCAGC 6 cut(s) 220, 250, 253, 355, 372, 658
BsgI GTGCAG 2 cut(s) 219, 1200
Bsh1285I CGRYCG 1 cut(s) 1114
BshFI GGCC 3 cut(s) 108, 141, 1105
BsiEI CGRYCG 1 cut(s) 1114
BsiHKAI GWGCWC 2 cut(s) 363, 844
BsiHKCI CYCGRG 2 cut(s) 362, 596
BsiSI CCGG 3 cut(s) 102, 570, 1087
BslFI GGGAC 1 cut(s) 318
BslI CCNNNNNNNGG 4 cut(s) 156, 553, 950, 1186
BsmAI GTCTC 1 cut(s) 84
BsmFI GGGAC 1 cut(s) 318
BsnI GGCC 3 cut(s) 108, 141, 1105
Bso31I GGTCTC 1 cut(s) 84
BsoBI CYCGRG 2 cut(s) 362, 596
Bsp1286I GDGCHC 2 cut(s) 363, 844
Bsp13I TCCGGA 2 cut(s) 569, 1086
Bsp143I GATC 7 cut(s) 23, 277, 556, 566, 1043, 1083, 1302
Bsp19I CCATGG 1 cut(s) 1238
BspACI CCGC 3 cut(s) 436, 668, 1166
BspANI GGCC 3 cut(s) 108, 141, 1105
BspCNI CTCAG 2 cut(s) 133, 1192
BspEI TCCGGA 2 cut(s) 569, 1086
BspHI TCATGA 1 cut(s) 241
BspLI GGNNCC 6 cut(s) 140, 279, 334, 558, 605, 1085
BspMI ACCTGC 1 cut(s) 320
BspPI GGATC 8 cut(s) 31, 272, 285, 551, 561, 564, 1078, 1091
BspQI GCTCTTC 1 cut(s) 203
BspTNI GGTCTC 1 cut(s) 84
BsrDI GCAATG 1 cut(s) 114
BsrFI RCCGGY 1 cut(s) 101
BsrI ACTGG 3 cut(s) 94, 466, 1106
BssAI RCCGGY 1 cut(s) 101
BssECI CCNNGG 3 cut(s) 552, 597, 1238
BssMI GATC 7 cut(s) 23, 277, 556, 566, 1043, 1083, 1302
BssNAI GTATAC 1 cut(s) 455
BssSI CACGAG 1 cut(s) 1155
BssT1I CCWWGG 2 cut(s) 552, 1238
Bst1107I GTATAC 1 cut(s) 455
Bst2BI CACGAG 1 cut(s) 1155
Bst4CI ACNGT 7 cut(s) 59, 154, 407, 482, 614, 834, 1115
Bst6I CTCTTC 4 cut(s) 203, 644, 685, 1073
BstC8I GCNNGC 4 cut(s) 162, 327, 383, 918
BstDEI CTNAG 4 cut(s) 120, 1003, 1200, 1250
BstDSI CCRYGG 1 cut(s) 1238
BstF5I GGATG 4 cut(s) 11, 423, 751, 1234
BstH2I RGCGCY 1 cut(s) 216
BstHHI GCGC 1 cut(s) 215
BstKTI GATC 7 cut(s) 26, 280, 559, 569, 1046, 1086, 1305
BstMAI GTCTC 1 cut(s) 84
BstMBI GATC 7 cut(s) 23, 277, 556, 566, 1043, 1083, 1302
BstMCI CGRYCG 1 cut(s) 1114
BstMWI GCNNNNNNNGC 3 cut(s) 233, 665, 905
BstNSI RCATGY 1 cut(s) 1300
BstSFI CTRYAG 1 cut(s) 921
BstV1I GCAGC 6 cut(s) 220, 250, 253, 355, 372, 658
BstV2I GAAGAC 2 cut(s) 39, 975
BstX2I RGATCY 4 cut(s) 277, 556, 566, 1083
BstYI RGATCY 4 cut(s) 277, 556, 566, 1083
BstZ17I GTATAC 1 cut(s) 455
BsuRI GGCC 3 cut(s) 108, 141, 1105
BtgI CCRYGG 1 cut(s) 1238
BtsCI GGATG 4 cut(s) 11, 423, 751, 1234
BveI ACCTGC 1 cut(s) 320
Cac8I GCNNGC 4 cut(s) 162, 327, 383, 918
CciI TCATGA 1 cut(s) 241
CfoI GCGC 1 cut(s) 215
Cfr10I RCCGGY 1 cut(s) 101
Cfr13I GGNCC 3 cut(s) 139, 332, 976
Csp6I GTAC 3 cut(s) 615, 835, 903
CviAII CATG 5 cut(s) 242, 355, 1239, 1297, 1314
CviQI GTAC 3 cut(s) 615, 835, 903
DdeI CTNAG 4 cut(s) 120, 1003, 1200, 1250
DpnI GATC 7 cut(s) 25, 279, 558, 568, 1045, 1085, 1304
DpnII GATC 7 cut(s) 23, 277, 556, 566, 1043, 1083, 1302
EaeI YGGCCR 2 cut(s) 106, 1103
Eam1104I CTCTTC 4 cut(s) 203, 644, 685, 1073
EarI CTCTTC 4 cut(s) 203, 644, 685, 1073
Ecl136II GAGCTC 1 cut(s) 842
Eco130I CCWWGG 2 cut(s) 552, 1238
Eco24I GRGCYC 1 cut(s) 844
Eco31I GGTCTC 1 cut(s) 84
Eco32I GATATC 1 cut(s) 71
Eco47I GGWCC 2 cut(s) 332, 976
Eco53kI GAGCTC 1 cut(s) 842
Eco57I CTGAAG 2 cut(s) 842, 867
Eco88I CYCGRG 2 cut(s) 362, 596
EcoICRI GAGCTC 1 cut(s) 842
EcoO109I RGGNCCY 1 cut(s) 332
EcoRV GATATC 1 cut(s) 71
EcoT14I CCWWGG 2 cut(s) 552, 1238
EcoT22I ATGCAT 1 cut(s) 356
EcoT38I GRGCYC 1 cut(s) 844
ErhI CCWWGG 2 cut(s) 552, 1238
FaeI CATG 5 cut(s) 245, 358, 1242, 1300, 1317
FaqI GGGAC 1 cut(s) 318
FatI CATG 5 cut(s) 241, 354, 1238, 1296, 1313
FauI CCCGC 1 cut(s) 429
FblI GTMKAC 2 cut(s) 454, 774
Fnu4HI GCNGC 7 cut(s) 234, 264, 267, 344, 386, 669, 672
FokI GGATG 3 cut(s) 430, 758, 1221
FriOI GRGCYC 1 cut(s) 844
Fsp4HI GCNGC 7 cut(s) 234, 264, 267, 344, 386, 669, 672
FspBI CTAG 2 cut(s) 467, 587
GlaI GCGC 1 cut(s) 214
GluI GCNGC 7 cut(s) 234, 264, 267, 344, 386, 669, 672
HaeII RGCGCY 1 cut(s) 216
HaeIII GGCC 3 cut(s) 108, 141, 1105
HapII CCGG 3 cut(s) 102, 570, 1087
HhaI GCGC 1 cut(s) 215
Hin1II CATG 5 cut(s) 245, 358, 1242, 1300, 1317
Hin6I GCGC 1 cut(s) 213
HinP1I GCGC 1 cut(s) 213
HincII GTYRAC 1 cut(s) 775
HindII GTYRAC 1 cut(s) 775
HindIII AAGCTT 2 cut(s) 128, 1136
HinfI GANTC 5 cut(s) 84, 202, 496, 628, 1246
HpaII CCGG 3 cut(s) 102, 570, 1087
Hpy166II GTNNAC 4 cut(s) 455, 485, 775, 1118
Hpy188I TCNGA 8 cut(s) 28, 89, 123, 207, 505, 566, 633, 1287
Hpy8I GTNNAC 4 cut(s) 455, 485, 775, 1118
HpyAV CCTTC 1 cut(s) 1274
HpyCH4III ACNGT 7 cut(s) 59, 154, 407, 482, 614, 834, 1115
HpyF10VI GCNNNNNNNGC 3 cut(s) 233, 665, 905
HpyF3I CTNAG 4 cut(s) 120, 1003, 1200, 1250
Hsp92II CATG 5 cut(s) 245, 358, 1242, 1300, 1317
HspAI GCGC 1 cut(s) 213
Kpn2I TCCGGA 2 cut(s) 569, 1086
Kzo9I GATC 7 cut(s) 23, 277, 556, 566, 1043, 1083, 1302
LguI GCTCTTC 1 cut(s) 203
LmnI GCTCC 2 cut(s) 847, 946
Lsp1109I GCAGC 6 cut(s) 220, 250, 253, 355, 372, 658
LweI GCATC 2 cut(s) 40, 752
MaeI CTAG 2 cut(s) 467, 587
MaeIII GTNAC 4 cut(s) 110, 866, 959, 1292
MalI GATC 7 cut(s) 25, 279, 558, 568, 1045, 1085, 1304
MboI GATC 7 cut(s) 23, 277, 556, 566, 1043, 1083, 1302
MflI RGATCY 4 cut(s) 277, 556, 566, 1083
MhlI GDGCHC 2 cut(s) 363, 844
MlsI TGGCCA 1 cut(s) 1105
MluCI AATT 5 cut(s) 143, 184, 221, 806, 1160
MluNI TGGCCA 1 cut(s) 1105
MmeI TCCRAC 1 cut(s) 528
Mox20I TGGCCA 1 cut(s) 1105
Mph1103I ATGCAT 1 cut(s) 356
MroI TCCGGA 2 cut(s) 569, 1086
MroXI GAANNNNTTC 3 cut(s) 255, 522, 694
MscI TGGCCA 1 cut(s) 1105
MseI TTAA 5 cut(s) 396, 425, 509, 710, 1094
MslI CAYNNNNRTG 1 cut(s) 1222
Msp20I TGGCCA 1 cut(s) 1105
MspI CCGG 3 cut(s) 102, 570, 1087
MwoI GCNNNNNNNGC 3 cut(s) 233, 665, 905
NcoI CCATGG 1 cut(s) 1238
NdeII GATC 7 cut(s) 23, 277, 556, 566, 1043, 1083, 1302
NlaIII CATG 5 cut(s) 245, 358, 1242, 1300, 1317
NlaIV GGNNCC 6 cut(s) 140, 279, 334, 558, 605, 1085
NsiI ATGCAT 1 cut(s) 356
NspI RCATGY 1 cut(s) 1300
PaeR7I CTCGAG 1 cut(s) 362
PagI TCATGA 1 cut(s) 241
PciSI GCTCTTC 1 cut(s) 203
PcsI WCGNNNNNNNCGW 1 cut(s) 969
PdmI GAANNNNTTC 3 cut(s) 255, 522, 694
PfeI GAWTC 5 cut(s) 84, 202, 496, 628, 1246
PflMI CCANNNNNTGG 1 cut(s) 156
PkrI GCNGC 7 cut(s) 235, 265, 268, 345, 387, 670, 673
PpuMI RGGWCCY 1 cut(s) 332
PsiI TTATAA 1 cut(s) 411
Psp124BI GAGCTC 1 cut(s) 844
Psp5II RGGWCCY 1 cut(s) 332
PspN4I GGNNCC 6 cut(s) 140, 279, 334, 558, 605, 1085
PspPI GGNCC 3 cut(s) 139, 332, 976
PspPPI RGGWCCY 1 cut(s) 332
PspXI VCTCGAGB 1 cut(s) 362
PsuI RGATCY 4 cut(s) 277, 556, 566, 1083
RsaI GTAC 3 cut(s) 616, 836, 904
RsaNI GTAC 3 cut(s) 615, 835, 903
RseI CAYNNNNRTG 1 cut(s) 1222
SacI GAGCTC 1 cut(s) 844
SalI GTCGAC 1 cut(s) 773
SapI GCTCTTC 1 cut(s) 203
SaqAI TTAA 5 cut(s) 396, 425, 509, 710, 1094
SatI GCNGC 7 cut(s) 234, 264, 267, 344, 386, 669, 672
Sau3AI GATC 7 cut(s) 23, 277, 556, 566, 1043, 1083, 1302
Sau96I GGNCC 3 cut(s) 139, 332, 976
SduI GDGCHC 2 cut(s) 363, 844
SfaNI GCATC 2 cut(s) 40, 752
SfcI CTRYAG 1 cut(s) 921
Sfr274I CTCGAG 1 cut(s) 362
SinI GGWCC 2 cut(s) 332, 976
SlaI CTCGAG 1 cut(s) 362
SmiMI CAYNNNNRTG 1 cut(s) 1222
SmlI CTYRAG 2 cut(s) 228, 362
SmoI CTYRAG 2 cut(s) 228, 362
Sse9I AATT 5 cut(s) 143, 184, 221, 806, 1160
SsiI CCGC 3 cut(s) 436, 668, 1166
SspMI CTAG 2 cut(s) 467, 587
SstI GAGCTC 1 cut(s) 844
StyI CCWWGG 2 cut(s) 552, 1238
TaaI ACNGT 7 cut(s) 59, 154, 407, 482, 614, 834, 1115
TaqI TCGA 7 cut(s) 48, 249, 363, 698, 774, 1018, 1110
TasI AATT 5 cut(s) 143, 184, 221, 806, 1160
TatI WGTACW 2 cut(s) 834, 902
TauI GCSGC 1 cut(s) 671
TfiI GAWTC 5 cut(s) 84, 202, 496, 628, 1246
Tru1I TTAA 5 cut(s) 396, 425, 509, 710, 1094
Tru9I TTAA 5 cut(s) 396, 425, 509, 710, 1094
TseI GCWGC 6 cut(s) 233, 263, 266, 343, 385, 671
TspDTI ATGAA 5 cut(s) 230, 258, 641, 1281, 1302
TspGWI ACGGA 1 cut(s) 978
Van91I CCANNNNNTGG 1 cut(s) 156
VpaK11BI GGWCC 2 cut(s) 332, 976
XapI RAATTY 2 cut(s) 806, 1160
XbaI TCTAGA 1 cut(s) 466
XceI RCATGY 1 cut(s) 1300
XcmI CCANNNNNNNNNTGG 1 cut(s) 101
XhoI CTCGAG 1 cut(s) 362
XmiI GTMKAC 2 cut(s) 454, 774
XmnI GAANNNNTTC 3 cut(s) 255, 522, 694
XspI CTAG 2 cut(s) 467, 587
Zsp2I ATGCAT 1 cut(s) 356
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.