Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0007894

Physical Location & Seq

Genomic Coordinates Forward (+)

18854295 .. 18856278

Gene Structure 1984 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1230200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1014 bp

ATGTCGTGCTCATCTTCATCCGGGTCGGAGGAGGACGATGAGGGCATCGACTCCTACAGGAAAGGAGGCTACCACGCCGTCAGGGTCGGCGATCAGTTCAACGGCGGCCGCTACGTGGCCCAGAGGAAGCTGGGTTGGGGTGAGTTCTCCACCGTCTGGCTCGCTTACGACACCACCACCTCTACGTACGTTGCTCTTAAGATTCAGAAAAGTGCAGCGCAGTTTGCTCAAGCTGCTCTTCATGAGATTGCAATTCTTTCCAATATCGCGGACGGTGACCCCACGCACTCCAAGTGTGTTGTGCGGCTGATTGACCATTTTAAGCATGCAGGTCCGAACGGGCAGCATCAGTGCATGGTCCTTGAATTTCTTGGTGATAGCTTACTTCGGCTGATCAAGCATAACCGTTACAAAGGCCTTAAATTATATAAAGTTAGGGAGATCTGCAAATGCATATTGATAGGTCTCGACTATTTGCATCGAGAACTTGGTATCATCCACACTGACCTAAAACCCGAAAACATCCTTCTTTGTAACACCATCGATCCTGCCAAAGATCCAGTCAGGGCTGGCCTCACACCAATTCTAGAAAGACCTGAAGGGAACCTGAACGGTGGAGCCACCATGACTCTTATTGAGAAAAAGTTGAAAAGGAGGGCAAGGAGGGCAGTTGCTAAGATTTCGTTGAGAAGAGAATCTATGGGAGGTAATGAACCTCCCAAGCCTGAAAGAAACCTAGATGGGATTGATGTAAAGTGCAAGGTTGTTGATTTCGGAAATGGATGTTGGGCCAACAAGCAACTTGCGGAAGAGATTCAAACAAGGCAGTATAGAGCTCCTGAAGTTATACTGCGATCTGGTTACTCATACTCAGTTGATATGTGGTCATTTGCCTGCACTGCATTTGAACTTGCGACTGGCGACATGTTGTTCGCTCCAAAGGTGGGACAAGGCTTTAGTGAGGATGAGGTAAAGATGGTTTCACTTTTACACCATTGTATTAAAGTTTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

338

Amino Acids

37.57

Weight (kDa)

8.58

Isoelectric Point (pI)

38.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	38 - 179	5.1e-22	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	41 - 179	1.5e-09	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	252 - 318	8.6e-13	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007894)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17530 AT2G17530 AT2G17530 AT4G35500 AT4G35500
fragaria_vesca	FvH4_1g10250 FvH4_1g10250 FvH4_1g10250
malus_domestica	MD02G1114500.v1.1 MD15G1230200.v1.1
prunus_persica	Prupe.7G183700_v2.0.a1
pyrus_communis	pycom02g08940 pycom15g20530
rosa_chinensis	RchiOBHm_Chr2g0097071
rosa_laevigata	RLG00000016700
rosa_multiflora	Rmu_sc0006853.1_g000001 Rmu_sc0017953.1_g000004
rosa_roxburghii	Rroxscaffold_2G00145000
rosa_rugosa	Rorug02G0063400
rosa_samantha	Rh2AG111000 Rh2BG112900 Rh2CG115100 Rh2DG114300
rosa_wichuraiana	Rw2G008630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	320
AccB7I	CCANNNNNTGG	1 cut(s)	156
AccII	CGCG	1 cut(s)	269
AciI	CCGC	5 cut(s)	105, 109, 269, 304, 806
AclWI	GGATC	2 cut(s)	539, 551
AcoI	YGGCCR	1 cut(s)	106
AcsI	RAATTY	1 cut(s)	365
AcuI	CTGAAG	2 cut(s)	618, 861
AfaI	GTAC	1 cut(s)	188
AfiI	CCNNNNNNNGG	3 cut(s)	115, 156, 944
AflII	CTTAAG	1 cut(s)	197
AflIII	ACRYGT	1 cut(s)	924
AgsI	TTSAA	5 cut(s)	100, 365, 649, 818, 908
AjuI	GAANNNNNNNTTGG	2 cut(s)	769, 801
AluBI	AGCT	4 cut(s)	130, 233, 381, 836
AluI	AGCT	4 cut(s)	130, 233, 381, 836
Alw21I	GWGCWC	2 cut(s)	11, 838
Alw26I	GTCTC	1 cut(s)	470
AlwI	GGATC	2 cut(s)	539, 551
AoxI	GGCC	5 cut(s)	106, 117, 415, 571, 789
ApeKI	GCWGC	3 cut(s)	215, 233, 343
ApoI	RAATTY	1 cut(s)	365
ArsI	GACNNNNNNTTYG	4 cut(s)	546, 578, 914, 946
Asp700I	GAANNNNTTC	1 cut(s)	813
AspLEI	GCGC	1 cut(s)	220
AspS9I	GGNCC	4 cut(s)	118, 332, 358, 789
AsuC2I	CCSGG	1 cut(s)	22
AsuHPI	GGTGA	3 cut(s)	152, 287, 386
AvaII	GGWCC	2 cut(s)	332, 358
BanII	GRGCYC	1 cut(s)	838
Bbv12I	GWGCWC	2 cut(s)	11, 838
BbvI	GCAGC	3 cut(s)	220, 227, 355
BccI	CCATC	3 cut(s)	548, 734, 970
BceAI	ACGGC	2 cut(s)	62, 118
BclI	TGATCA	1 cut(s)	393
BcnI	CCSGG	1 cut(s)	22
BcoDI	GTCTC	1 cut(s)	470
BfaI	CTAG	2 cut(s)	587, 737
BfmI	CTRYAG	1 cut(s)	55
BfrI	CTTAAG	1 cut(s)	197
BfuAI	ACCTGC	1 cut(s)	320
BglII	AGATCT	1 cut(s)	441
BisI	GCNGC	6 cut(s)	106, 109, 216, 234, 305, 344
BlsI	GCNGC	6 cut(s)	107, 110, 217, 235, 306, 345
Bme1390I	CCNGG	1 cut(s)	22
Bme18I	GGWCC	2 cut(s)	332, 358
BmgT120I	GGNCC	4 cut(s)	118, 332, 358, 789
BmiI	GGNNCC	2 cut(s)	605, 619
BmrFI	CCNGG	1 cut(s)	22
BmsI	GCATC	3 cut(s)	54, 355, 487
BpuEI	CTTGAG	1 cut(s)	213
BpuMI	CCSGG	1 cut(s)	22
Bsa29I	ATCGAT	1 cut(s)	543
BsaAI	YACGTR	2 cut(s)	115, 186
BsaI	GGTCTC	1 cut(s)	470
Bsc4I	CCNNNNNNNGG	3 cut(s)	115, 156, 944
Bse1I	ACTGG	2 cut(s)	560, 922
BseCI	ATCGAT	1 cut(s)	543
BseGI	GGATG	5 cut(s)	17, 495, 522, 788, 970
BseLI	CCNNNNNNNGG	3 cut(s)	115, 156, 944
BseMII	CTCAG	1 cut(s)	885
BseNI	ACTGG	2 cut(s)	560, 922
BseRI	GAGGAG	1 cut(s)	44
BseX3I	CGGCCG	1 cut(s)	106
BseXI	GCAGC	3 cut(s)	220, 227, 355
BseYI	CCCAGC	1 cut(s)	130
BsgI	GTGCAG	2 cut(s)	234, 880
Bsh1236I	CGCG	1 cut(s)	269
Bsh1285I	CGRYCG	1 cut(s)	109
BshFI	GGCC	5 cut(s)	108, 119, 417, 573, 791
BshVI	ATCGAT	1 cut(s)	543
BsiEI	CGRYCG	1 cut(s)	109
BsiHKAI	GWGCWC	2 cut(s)	11, 838
BsiSI	CCGG	1 cut(s)	21
BsiWI	CGTACG	1 cut(s)	186
BslFI	GGGAC	1 cut(s)	960
BslI	CCNNNNNNNGG	3 cut(s)	115, 156, 944
BsmAI	GTCTC	1 cut(s)	470
BsmFI	GGGAC	1 cut(s)	960
BsnI	GGCC	5 cut(s)	108, 119, 417, 573, 791
Bso31I	GGTCTC	1 cut(s)	470
Bsp1286I	GDGCHC	2 cut(s)	11, 838
Bsp143I	GATC	6 cut(s)	91, 393, 441, 544, 556, 854
BspACI	CCGC	5 cut(s)	105, 109, 269, 304, 806
BspANI	GGCC	5 cut(s)	108, 119, 417, 573, 791
BspCNI	CTCAG	1 cut(s)	884
BspDI	ATCGAT	1 cut(s)	543
BspFNI	CGCG	1 cut(s)	269
BspHI	TCATGA	1 cut(s)	241
BspLI	GGNNCC	2 cut(s)	605, 619
BspMI	ACCTGC	1 cut(s)	320
BspPI	GGATC	2 cut(s)	539, 551
BspQI	GCTCTTC	1 cut(s)	243
BspTI	CTTAAG	1 cut(s)	197
BspTNI	GGTCTC	1 cut(s)	470
BsrI	ACTGG	2 cut(s)	560, 922
BssMI	GATC	6 cut(s)	91, 393, 441, 544, 556, 854
Bst4CI	ACNGT	4 cut(s)	154, 275, 407, 614
Bst6I	CTCTTC	3 cut(s)	243, 685, 804
BstAFI	CTTAAG	1 cut(s)	197
BstBAI	YACGTR	2 cut(s)	115, 186
BstC8I	GCNNGC	4 cut(s)	162, 327, 571, 895
BstDEI	CTNAG	2 cut(s)	675, 871
BstEII	GGTNACC	1 cut(s)	275
BstF5I	GGATG	5 cut(s)	17, 495, 522, 788, 970
BstFNI	CGCG	1 cut(s)	269
BstHHI	GCGC	1 cut(s)	220
BstKTI	GATC	6 cut(s)	94, 396, 444, 547, 559, 857
BstMAI	GTCTC	1 cut(s)	470
BstMBI	GATC	6 cut(s)	91, 393, 441, 544, 556, 854
BstMCI	CGRYCG	1 cut(s)	109
BstMWI	GCNNNNNNNGC	5 cut(s)	224, 233, 397, 665, 899
BstNSI	RCATGY	2 cut(s)	329, 928
BstPI	GGTNACC	1 cut(s)	275
BstSCI	CCNGG	1 cut(s)	20
BstSFI	CTRYAG	1 cut(s)	55
BstSNI	TACGTA	1 cut(s)	186
BstUI	CGCG	1 cut(s)	269
BstV1I	GCAGC	3 cut(s)	220, 227, 355
BstX2I	RGATCY	2 cut(s)	441, 556
BstYI	RGATCY	2 cut(s)	441, 556
BstZI	CGGCCG	1 cut(s)	106
Bsu15I	ATCGAT	1 cut(s)	543
BsuRI	GGCC	5 cut(s)	108, 119, 417, 573, 791
BsuTUI	ATCGAT	1 cut(s)	543
BtsCI	GGATG	5 cut(s)	17, 495, 522, 788, 970
BtsI	GCAGTG	1 cut(s)	897
BtsIMutI	CAGTG	3 cut(s)	356, 501, 897
BveI	ACCTGC	1 cut(s)	320
Cac8I	GCNNGC	4 cut(s)	162, 327, 571, 895
CciI	TCATGA	1 cut(s)	241
CciNI	GCGGCCGC	1 cut(s)	106
CfoI	GCGC	1 cut(s)	220
Cfr13I	GGNCC	4 cut(s)	118, 332, 358, 789
ClaI	ATCGAT	1 cut(s)	543
Csp6I	GTAC	1 cut(s)	187
CviAII	CATG	5 cut(s)	242, 326, 355, 625, 925
CviQI	GTAC	1 cut(s)	187
DdeI	CTNAG	2 cut(s)	675, 871
DpnI	GATC	6 cut(s)	93, 395, 443, 546, 558, 856
DpnII	GATC	6 cut(s)	91, 393, 441, 544, 556, 854
EaeI	YGGCCR	1 cut(s)	106
EagI	CGGCCG	1 cut(s)	106
Eam1104I	CTCTTC	3 cut(s)	243, 685, 804
EarI	CTCTTC	3 cut(s)	243, 685, 804
Ecl136II	GAGCTC	1 cut(s)	836
EclXI	CGGCCG	1 cut(s)	106
Eco105I	TACGTA	1 cut(s)	186
Eco147I	AGGCCT	1 cut(s)	417
Eco24I	GRGCYC	1 cut(s)	838
Eco31I	GGTCTC	1 cut(s)	470
Eco47I	GGWCC	2 cut(s)	332, 358
Eco52I	CGGCCG	1 cut(s)	106
Eco53kI	GAGCTC	1 cut(s)	836
Eco57I	CTGAAG	2 cut(s)	618, 861
Eco91I	GGTNACC	1 cut(s)	275
EcoICRI	GAGCTC	1 cut(s)	836
EcoO65I	GGTNACC	1 cut(s)	275
EcoT22I	ATGCAT	1 cut(s)	455
EcoT38I	GRGCYC	1 cut(s)	838
FaeI	CATG	5 cut(s)	245, 329, 358, 628, 928
FalI	AAGNNNNNCTT	2 cut(s)	222, 254
FaqI	GGGAC	1 cut(s)	960
FatI	CATG	5 cut(s)	241, 325, 354, 624, 924
FbaI	TGATCA	1 cut(s)	393
Fnu4HI	GCNGC	6 cut(s)	106, 109, 216, 234, 305, 344
FokI	GGATG	5 cut(s)	4, 482, 509, 795, 977
FriOI	GRGCYC	1 cut(s)	838
Fsp4HI	GCNGC	6 cut(s)	106, 109, 216, 234, 305, 344
FspBI	CTAG	2 cut(s)	587, 737
GlaI	GCGC	1 cut(s)	219
GluI	GCNGC	6 cut(s)	106, 109, 216, 234, 305, 344
GsaI	CCCAGC	1 cut(s)	134
HaeIII	GGCC	5 cut(s)	108, 119, 417, 573, 791
HapII	CCGG	1 cut(s)	21
HhaI	GCGC	1 cut(s)	220
Hin1II	CATG	5 cut(s)	245, 329, 358, 628, 928
Hin6I	GCGC	1 cut(s)	218
HinP1I	GCGC	1 cut(s)	218
HinfI	GANTC	5 cut(s)	50, 202, 628, 695, 814
HpaII	CCGG	1 cut(s)	21
HphI	GGTGA	3 cut(s)	152, 287, 386
Hpy188I	TCNGA	4 cut(s)	28, 207, 336, 776
Hpy188III	TCNNGA	5 cut(s)	242, 467, 482, 587, 839
HpyAV	CCTTC	2 cut(s)	536, 593
HpyCH4III	ACNGT	4 cut(s)	154, 275, 407, 614
HpyCH4IV	ACGT	3 cut(s)	114, 185, 189
HpyF10VI	GCNNNNNNNGC	5 cut(s)	224, 233, 397, 665, 899
HpyF3I	CTNAG	2 cut(s)	675, 871
HpySE526I	ACGT	3 cut(s)	114, 185, 189
Hsp92II	CATG	5 cut(s)	245, 329, 358, 628, 928
HspAI	GCGC	1 cut(s)	218
Ksp22I	TGATCA	1 cut(s)	393
Kzo9I	GATC	6 cut(s)	91, 393, 441, 544, 556, 854
LguI	GCTCTTC	1 cut(s)	243
LmnI	GCTCC	3 cut(s)	617, 841, 940
Lsp1109I	GCAGC	3 cut(s)	220, 227, 355
LweI	GCATC	3 cut(s)	54, 355, 487
MaeI	CTAG	2 cut(s)	587, 737
MaeII	ACGT	3 cut(s)	114, 185, 189
MaeIII	GTNAC	4 cut(s)	275, 407, 533, 860
MalI	GATC	6 cut(s)	93, 395, 443, 546, 558, 856
MboI	GATC	6 cut(s)	91, 393, 441, 544, 556, 854
MboII	GAAGA	4 cut(s)	6, 230, 702, 821
MflI	RGATCY	2 cut(s)	441, 556
MhlI	GDGCHC	2 cut(s)	11, 838
MluCI	AATT	4 cut(s)	252, 365, 422, 582
MlyI	GAGTC	2 cut(s)	44, 622
MmeI	TCCRAC	1 cut(s)	6
Mph1103I	ATGCAT	1 cut(s)	455
MroXI	GAANNNNTTC	1 cut(s)	813
MseI	TTAA	4 cut(s)	198, 321, 420, 1002
MspCI	CTTAAG	1 cut(s)	197
MspI	CCGG	1 cut(s)	21
MspR9I	CCNGG	1 cut(s)	22
MvnI	CGCG	1 cut(s)	269
MwoI	GCNNNNNNNGC	5 cut(s)	224, 233, 397, 665, 899
NciI	CCSGG	1 cut(s)	22
NdeII	GATC	6 cut(s)	91, 393, 441, 544, 556, 854
NlaIII	CATG	5 cut(s)	245, 329, 358, 628, 928
NlaIV	GGNNCC	2 cut(s)	605, 619
NmuCI	GTSAC	1 cut(s)	275
NotI	GCGGCCGC	1 cut(s)	106
NsiI	ATGCAT	1 cut(s)	455
NspI	RCATGY	2 cut(s)	329, 928
PaeI	GCATGC	1 cut(s)	329
PagI	TCATGA	1 cut(s)	241
PceI	AGGCCT	1 cut(s)	417
PciI	ACATGT	1 cut(s)	924
PciSI	GCTCTTC	1 cut(s)	243
PdmI	GAANNNNTTC	1 cut(s)	813
PfeI	GAWTC	3 cut(s)	202, 695, 814
Pfl23II	CGTACG	1 cut(s)	186
PflMI	CCANNNNNTGG	1 cut(s)	156
PkrI	GCNGC	6 cut(s)	107, 110, 217, 235, 306, 345
PleI	GAGTC	2 cut(s)	44, 622
PpsI	GAGTC	2 cut(s)	44, 622
Ppu21I	YACGTR	2 cut(s)	115, 186
PscI	ACATGT	1 cut(s)	924
Psp124BI	GAGCTC	1 cut(s)	838
PspEI	GGTNACC	1 cut(s)	275
PspFI	CCCAGC	1 cut(s)	130
PspLI	CGTACG	1 cut(s)	186
PspN4I	GGNNCC	2 cut(s)	605, 619
PspPI	GGNCC	4 cut(s)	118, 332, 358, 789
PsuI	RGATCY	2 cut(s)	441, 556
RsaI	GTAC	1 cut(s)	188
RsaNI	GTAC	1 cut(s)	187
SacI	GAGCTC	1 cut(s)	838
SapI	GCTCTTC	1 cut(s)	243
SaqAI	TTAA	4 cut(s)	198, 321, 420, 1002
SatI	GCNGC	6 cut(s)	106, 109, 216, 234, 305, 344
Sau3AI	GATC	6 cut(s)	91, 393, 441, 544, 556, 854
Sau96I	GGNCC	4 cut(s)	118, 332, 358, 789
SchI	GAGTC	2 cut(s)	44, 622
ScrFI	CCNGG	1 cut(s)	22
SduI	GDGCHC	2 cut(s)	11, 838
SfaNI	GCATC	3 cut(s)	54, 355, 487
SfcI	CTRYAG	1 cut(s)	55
SinI	GGWCC	2 cut(s)	332, 358
SmlI	CTYRAG	2 cut(s)	197, 228
SmoI	CTYRAG	2 cut(s)	197, 228
SnaBI	TACGTA	1 cut(s)	186
SphI	GCATGC	1 cut(s)	329
Sse9I	AATT	4 cut(s)	252, 365, 422, 582
SseBI	AGGCCT	1 cut(s)	417
SsiI	CCGC	5 cut(s)	105, 109, 269, 304, 806
SspMI	CTAG	2 cut(s)	587, 737
SstI	GAGCTC	1 cut(s)	838
StuI	AGGCCT	1 cut(s)	417
StyD4I	CCNGG	1 cut(s)	20
TaaI	ACNGT	4 cut(s)	154, 275, 407, 614
TaiI	ACGT	3 cut(s)	117, 188, 192
TaqI	TCGA	4 cut(s)	48, 468, 481, 543
TasI	AATT	4 cut(s)	252, 365, 422, 582
TauI	GCSGC	3 cut(s)	108, 111, 307
TfiI	GAWTC	3 cut(s)	202, 695, 814
Tru1I	TTAA	4 cut(s)	198, 321, 420, 1002
Tru9I	TTAA	4 cut(s)	198, 321, 420, 1002
TscAI	CASTG	3 cut(s)	356, 508, 904
TseFI	GTSAC	1 cut(s)	275
TseI	GCWGC	3 cut(s)	215, 233, 343
Tsp45I	GTSAC	1 cut(s)	275
TspDTI	ATGAA	3 cut(s)	6, 230, 726
TspRI	CASTG	3 cut(s)	356, 508, 904
Van91I	CCANNNNNTGG	1 cut(s)	156
Vha464I	CTTAAG	1 cut(s)	197
VpaK11BI	GGWCC	2 cut(s)	332, 358
XapI	RAATTY	1 cut(s)	365
XbaI	TCTAGA	1 cut(s)	586
XceI	RCATGY	2 cut(s)	329, 928
XmnI	GAANNNNTTC	1 cut(s)	813
XspI	CTAG	2 cut(s)	587, 737
Zsp2I	ATGCAT	1 cut(s)	455

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.