FvH4_1g10250
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Forward (+)
5582897 .. 5586033
3137 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g10250.t3

Sequence Viewer

Length: 1338 bp
ATGTCGTGCTCGTCTTCATCGGGGTCGGAGGACGACGATGAGGGTTTCGACTCTTACAGAAAAGGAGGGTACCACGCCGTCAGGATCGGCGATCAGTTCGCCGGCGGCCGATATGTAGCTCAGAGAAAACTGGGTTGGGGTCAATTCTCCACCGTCTGGCTCGCTTACGATACCACCAACTCTACGTATGTTGCTCTTAAGATACAAAAAAGTGCAGCTCAATTTGCTCAAGCTGCTCTCCATGAGATTCAAATTCTTACAGCTATTGCGGAAGGGGACTCCTCGGATTTAAAGTGTGTTGTACGACTGATCGACCATTTTAAGCACGCAGGCCCAAATGGGCAGCATTTATGCATGGTCCTTGAGTTCCTTGGTGATAGCTTACTCCGGCTGATCAAGTATAACCGTTATAAAGGTCTTAAGTTGGATAATGTAAGGGAGATCTGCAAATGTATATTGATGGGTCTGGATTATTTGCATAGAGAAGTTGGTATAATCCACACTGACTTAAAACCAGAAAATATTCTTCTTTTTAACACCATTGATCCCACCAAAGATCCCATCAGGTCTAAAGTTACACCAATTATTGAAAGGCCTGAAGGAGGCCTGAATGGTGGAGTCACCATGAGCCTTATTGAGAAAAAACTCAAAAGGAGGGCAAGGAGGGCAGTTGCTAAGATTTCCTTGAGAAGGGAATCTATGGGAGGAGGTGAAGCTCCCAAGTCAGAAAGAAATATGGACGGTGTTGATGTAAGGTGTAAGGTTGTCGATTTTGGGAATGCATGTTGGGCTGACAAGCAGCTTGCAGAAGAGATTCAGACGAGGCAGTATAGAGCTCCTGAGGTTATTCTACGATCTGGTTATACCTACTCAGTGGATATGTGGTCATTTGCTTGCACAGCCTTCGAGCTTGCGACAGGTGACATGTTGTTTGCTCCAAAGATGGGAGAAGGCTTTAGTGAGGATGAGGATCACCTTGCTTTGATGATGGAGCTCCTTGGAAAGATGCCTCGAAAGGTAGCCATTGGAGGAGCTCGTTCCAAGGATTTCTTCGACAGACATGGTGATCTAAAGAGAATTCGGAGGCTGAAATTTTGGCCACTCAATAAAATACTGGTCGATAGATACAACTTTTCCGAGACTGATGCTCGGGAGTTTGCAGAGTTCCTATGTCCCATTTTCGACTTTTCACCAGAGAAGCGGCCAACTGCTCAGCAGTGCCTTCAACATCCATGGCTCAACGGTGTGACTACGTCTCAGGGCGACGCGAATAACATATCAAGCGTGGAAAAGGTGAATGTTGGGATGAGCAACCTTCAGATTAAGGTTGGCAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

446

Amino Acids

50.02

Weight (kDa)

8.54

Isoelectric Point (pI)

45.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 38 - 178 2.9e-22 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 41 - 178 3.9e-10 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 252 - 317 3.2e-13 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 411
Acc65I GGTACC 1 cut(s) 69
AccB1I GGYRCC 1 cut(s) 69
AccB7I CCANNNNNTGG 1 cut(s) 156
AccII CGCG 1 cut(s) 1268
AciI CCGC 3 cut(s) 105, 269, 1201
AclWI GGATC 4 cut(s) 92, 539, 551, 978
AcoI YGGCCR 3 cut(s) 106, 1097, 1202
AcsI RAATTY 3 cut(s) 252, 1077, 1091
AcuI CTGAAG 2 cut(s) 618, 1301
AfaI GTAC 2 cut(s) 71, 303
AfiI CCNNNNNNNGG 4 cut(s) 156, 602, 690, 944
AflII CTTAAG 2 cut(s) 197, 419
AflIII ACRYGT 1 cut(s) 924
AgsI TTSAA 3 cut(s) 251, 590, 1226
AjuI GAANNNNNNNTTGG 4 cut(s) 118, 150, 1034, 1066
Alw21I GWGCWC 4 cut(s) 11, 838, 996, 1036
Alw26I GTCTC 2 cut(s) 1133, 1260
AlwI GGATC 4 cut(s) 92, 539, 551, 978
Ama87I CYCGRG 1 cut(s) 1149
AoxI GGCC 6 cut(s) 106, 331, 593, 604, 1097, 1202
ApeKI GCWGC 4 cut(s) 215, 233, 343, 799
ApoI RAATTY 3 cut(s) 252, 1077, 1091
ArsI GACNNNNNNTTYG 2 cut(s) 914, 946
Asp700I GAANNNNTTC 2 cut(s) 522, 813
Asp718I GGTACC 1 cut(s) 69
AspS9I GGNCC 2 cut(s) 332, 358
AsuHPI GGTGA 8 cut(s) 386, 613, 722, 932, 965, 1076, 1182, 1306
AvaI CYCGRG 1 cut(s) 1149
AvaII GGWCC 1 cut(s) 358
AxyI CCTNAGG 1 cut(s) 840
BalI TGGCCA 1 cut(s) 1099
BanI GGYRCC 1 cut(s) 69
BanII GRGCYC 3 cut(s) 838, 996, 1036
BbsI GAAGAC 1 cut(s) 6
Bbv12I GWGCWC 4 cut(s) 11, 838, 996, 1036
BbvI GCAGC 4 cut(s) 220, 227, 355, 811
BccI CCATC 4 cut(s) 454, 569, 937, 982
BceAI ACGGC 1 cut(s) 62
BcgI CGANNNNNNTGC 4 cut(s) 886, 920, 1127, 1161
BclI TGATCA 1 cut(s) 393
BcoDI GTCTC 2 cut(s) 1133, 1260
BfrI CTTAAG 2 cut(s) 197, 419
BglII AGATCT 1 cut(s) 441
BisI GCNGC 6 cut(s) 106, 216, 234, 344, 800, 1202
BlpI GCTNAGC 1 cut(s) 1212
BlsI GCNGC 6 cut(s) 107, 217, 235, 345, 801, 1203
Bme18I GGWCC 1 cut(s) 358
BmeT110I CYCGRG 1 cut(s) 1149
BmgT120I GGNCC 2 cut(s) 332, 358
BmiI GGNNCC 1 cut(s) 71
BmrI ACTGGG 1 cut(s) 140
BmsI GCATC 2 cut(s) 996, 1135
BmuI ACTGGG 1 cut(s) 140
BpiI GAAGAC 1 cut(s) 6
Bpu1102I GCTNAGC 1 cut(s) 1212
BpuEI CTTGAG 3 cut(s) 213, 383, 706
BsaAI YACGTR 1 cut(s) 186
BsaBI GATNNNNATC 1 cut(s) 969
BsaJI CCNNGG 5 cut(s) 282, 370, 997, 1041, 1232
Bsc4I CCNNNNNNNGG 4 cut(s) 156, 602, 690, 944
Bse118I RCCGGY 1 cut(s) 101
Bse1I ACTGG 2 cut(s) 135, 1119
Bse21I CCTNAGG 1 cut(s) 840
Bse8I GATNNNNATC 1 cut(s) 969
BseDI CCNNGG 5 cut(s) 282, 370, 997, 1041, 1232
BseGI GGATG 3 cut(s) 970, 1228, 1311
BseJI GATNNNNATC 1 cut(s) 969
BseLI CCNNNNNNNGG 4 cut(s) 156, 602, 690, 944
BseMII CTCAG 5 cut(s) 134, 831, 885, 1226, 1271
BseNI ACTGG 2 cut(s) 135, 1119
BseRI GAGGAG 3 cut(s) 271, 720, 1044
BseX3I CGGCCG 1 cut(s) 106
BseXI GCAGC 4 cut(s) 220, 227, 355, 811
BsgI GTGCAG 1 cut(s) 234
Bsh1236I CGCG 1 cut(s) 1268
Bsh1285I CGRYCG 1 cut(s) 109
BshFI GGCC 6 cut(s) 108, 333, 595, 606, 1099, 1204
BshNI GGYRCC 1 cut(s) 69
BsiEI CGRYCG 1 cut(s) 109
BsiHKAI GWGCWC 4 cut(s) 11, 838, 996, 1036
BsiHKCI CYCGRG 1 cut(s) 1149
BsiSI CCGG 2 cut(s) 102, 388
BslFI GGGAC 2 cut(s) 290, 1158
BslI CCNNNNNNNGG 4 cut(s) 156, 602, 690, 944
BsmAI GTCTC 2 cut(s) 1133, 1260
BsmBI CGTCTC 1 cut(s) 1260
BsmFI GGGAC 2 cut(s) 290, 1158
BsmI GAATGC 1 cut(s) 784
BsnI GGCC 6 cut(s) 108, 333, 595, 606, 1099, 1204
BsoBI CYCGRG 1 cut(s) 1149
Bsp1286I GDGCHC 4 cut(s) 11, 838, 996, 1036
Bsp1720I GCTNAGC 1 cut(s) 1212
Bsp19I CCATGG 1 cut(s) 1232
BspACI CCGC 3 cut(s) 105, 269, 1201
BspANI GGCC 6 cut(s) 108, 333, 595, 606, 1099, 1204
BspCNI CTCAG 5 cut(s) 133, 832, 884, 1225, 1270
BspFNI CGCG 1 cut(s) 1268
BspLI GGNNCC 1 cut(s) 71
BspPI GGATC 4 cut(s) 92, 539, 551, 978
BspT107I GGYRCC 1 cut(s) 69
BspTI CTTAAG 2 cut(s) 197, 419
BsrFI RCCGGY 1 cut(s) 101
BsrI ACTGG 2 cut(s) 135, 1119
BssAI RCCGGY 1 cut(s) 101
BssECI CCNNGG 5 cut(s) 282, 370, 997, 1041, 1232
BssT1I CCWWGG 4 cut(s) 370, 997, 1041, 1232
Bst4CI ACNGT 4 cut(s) 154, 407, 743, 1244
Bst6I CTCTTC 1 cut(s) 804
BstAFI CTTAAG 2 cut(s) 197, 419
BstBAI YACGTR 1 cut(s) 186
BstC8I GCNNGC 7 cut(s) 103, 162, 327, 331, 804, 895, 912
BstDEI CTNAG 6 cut(s) 120, 675, 840, 871, 1212, 1257
BstDSI CCRYGG 1 cut(s) 1232
BstENI CCTNNNNNAGG 2 cut(s) 600, 688
BstF5I GGATG 3 cut(s) 970, 1228, 1311
BstFNI CGCG 1 cut(s) 1268
BstMAI GTCTC 2 cut(s) 1133, 1260
BstMCI CGRYCG 1 cut(s) 109
BstMWI GCNNNNNNNGC 5 cut(s) 224, 233, 665, 788, 899
BstNSI RCATGY 2 cut(s) 786, 928
BstSNI TACGTA 1 cut(s) 186
BstUI CGCG 1 cut(s) 1268
BstV1I GCAGC 4 cut(s) 220, 227, 355, 811
BstV2I GAAGAC 1 cut(s) 6
BstX2I RGATCY 2 cut(s) 441, 556
BstYI RGATCY 2 cut(s) 441, 556
BstZI CGGCCG 1 cut(s) 106
Bsu36I CCTNAGG 1 cut(s) 840
BsuRI GGCC 6 cut(s) 108, 333, 595, 606, 1099, 1204
BtgI CCRYGG 1 cut(s) 1232
BtsCI GGATG 3 cut(s) 970, 1228, 1311
BtsI GCAGTG 1 cut(s) 1223
BtsIMutI CAGTG 3 cut(s) 501, 879, 1223
Cac8I GCNNGC 7 cut(s) 103, 162, 327, 331, 804, 895, 912
Cfr10I RCCGGY 1 cut(s) 101
Cfr13I GGNCC 2 cut(s) 332, 358
CseI GACGC 1 cut(s) 1274
Csp6I GTAC 2 cut(s) 70, 302
CviAII CATG 7 cut(s) 242, 355, 625, 783, 925, 1061, 1233
CviQI GTAC 2 cut(s) 70, 302
DdeI CTNAG 6 cut(s) 120, 675, 840, 871, 1212, 1257
DraI TTTAAA 1 cut(s) 291
EaeI YGGCCR 3 cut(s) 106, 1097, 1202
EagI CGGCCG 1 cut(s) 106
Eam1104I CTCTTC 1 cut(s) 804
EarI CTCTTC 1 cut(s) 804
Ecl136II GAGCTC 3 cut(s) 836, 994, 1034
EclXI CGGCCG 1 cut(s) 106
Eco105I TACGTA 1 cut(s) 186
Eco130I CCWWGG 4 cut(s) 370, 997, 1041, 1232
Eco147I AGGCCT 2 cut(s) 595, 606
Eco24I GRGCYC 3 cut(s) 838, 996, 1036
Eco47I GGWCC 1 cut(s) 358
Eco52I CGGCCG 1 cut(s) 106
Eco53kI GAGCTC 3 cut(s) 836, 994, 1034
Eco57I CTGAAG 2 cut(s) 618, 1301
Eco81I CCTNAGG 1 cut(s) 840
Eco88I CYCGRG 1 cut(s) 1149
EcoICRI GAGCTC 3 cut(s) 836, 994, 1034
EcoNI CCTNNNNNAGG 2 cut(s) 600, 688
EcoRI GAATTC 1 cut(s) 1077
EcoT14I CCWWGG 4 cut(s) 370, 997, 1041, 1232
EcoT22I ATGCAT 2 cut(s) 356, 784
EcoT38I GRGCYC 3 cut(s) 838, 996, 1036
ErhI CCWWGG 4 cut(s) 370, 997, 1041, 1232
Esp3I CGTCTC 1 cut(s) 1260
FaeI CATG 7 cut(s) 245, 358, 628, 786, 928, 1064, 1236
FalI AAGNNNNNCTT 4 cut(s) 668, 700, 1034, 1066
FaqI GGGAC 2 cut(s) 290, 1158
FatI CATG 7 cut(s) 241, 354, 624, 782, 924, 1060, 1232
FbaI TGATCA 1 cut(s) 393
Fnu4HI GCNGC 6 cut(s) 106, 216, 234, 344, 800, 1202
FokI GGATG 3 cut(s) 977, 1215, 1318
FriOI GRGCYC 3 cut(s) 838, 996, 1036
Fsp4HI GCNGC 6 cut(s) 106, 216, 234, 344, 800, 1202
GluI GCNGC 6 cut(s) 106, 216, 234, 344, 800, 1202
HaeIII GGCC 6 cut(s) 108, 333, 595, 606, 1099, 1204
HapII CCGG 2 cut(s) 102, 388
HgaI GACGC 1 cut(s) 1274
Hin1II CATG 7 cut(s) 245, 358, 628, 786, 928, 1064, 1236
HinfI GANTC 6 cut(s) 50, 247, 278, 618, 695, 814
HpaII CCGG 2 cut(s) 102, 388
HphI GGTGA 8 cut(s) 386, 613, 722, 932, 965, 1076, 1182, 1306
Hpy188I TCNGA 8 cut(s) 28, 123, 286, 727, 819, 1083, 1138, 1320
Hpy188III TCNNGA 4 cut(s) 82, 467, 839, 1151
Hpy99I CGWCG 2 cut(s) 38, 1268
HpyAV CCTTC 7 cut(s) 266, 593, 684, 913, 944, 1232, 1325
HpyCH4III ACNGT 4 cut(s) 154, 407, 743, 1244
HpyCH4IV ACGT 2 cut(s) 185, 1253
HpyCH4V TGCA 8 cut(s) 215, 354, 447, 478, 782, 806, 897, 1160
HpyF10VI GCNNNNNNNGC 5 cut(s) 224, 233, 665, 788, 899
HpyF3I CTNAG 6 cut(s) 120, 675, 840, 871, 1212, 1257
HpySE526I ACGT 2 cut(s) 185, 1253
Hsp92II CATG 7 cut(s) 245, 358, 628, 786, 928, 1064, 1236
KpnI GGTACC 1 cut(s) 73
KroI GCCGGC 1 cut(s) 101
KroNI GCCGGC 1 cut(s) 103
Ksp22I TGATCA 1 cut(s) 393
LmnI GCTCC 6 cut(s) 721, 841, 940, 991, 999, 1031
Lsp1109I GCAGC 4 cut(s) 220, 227, 355, 811
LweI GCATC 2 cut(s) 996, 1135
MaeII ACGT 2 cut(s) 185, 1253
MaeIII GTNAC 4 cut(s) 574, 619, 920, 1246
MboII GAAGA 4 cut(s) 6, 518, 821, 1042
MflI RGATCY 2 cut(s) 441, 556
MhlI GDGCHC 4 cut(s) 11, 838, 996, 1036
MlsI TGGCCA 1 cut(s) 1099
MluCI AATT 6 cut(s) 143, 221, 252, 582, 1077, 1091
MluNI TGGCCA 1 cut(s) 1099
MlyI GAGTC 3 cut(s) 44, 272, 627
MmeI TCCRAC 2 cut(s) 6, 405
Mox20I TGGCCA 1 cut(s) 1099
Mph1103I ATGCAT 2 cut(s) 356, 784
MreI CGCCGGCG 1 cut(s) 101
MroNI GCCGGC 1 cut(s) 101
MroXI GAANNNNTTC 2 cut(s) 522, 813
MscI TGGCCA 1 cut(s) 1099
MseI TTAA 7 cut(s) 198, 290, 321, 420, 509, 534, 1323
Msp20I TGGCCA 1 cut(s) 1099
MspCI CTTAAG 2 cut(s) 197, 419
MspI CCGG 2 cut(s) 102, 388
Mva1269I GAATGC 1 cut(s) 784
MvnI CGCG 1 cut(s) 1268
MwoI GCNNNNNNNGC 5 cut(s) 224, 233, 665, 788, 899
NaeI GCCGGC 1 cut(s) 103
NcoI CCATGG 1 cut(s) 1232
NgoMIV GCCGGC 1 cut(s) 101
NlaIII CATG 7 cut(s) 245, 358, 628, 786, 928, 1064, 1236
NlaIV GGNNCC 1 cut(s) 71
NmuCI GTSAC 3 cut(s) 619, 920, 1246
NsiI ATGCAT 2 cut(s) 356, 784
NspI RCATGY 2 cut(s) 786, 928
PceI AGGCCT 2 cut(s) 595, 606
PciI ACATGT 1 cut(s) 924
PctI GAATGC 1 cut(s) 784
PdiI GCCGGC 1 cut(s) 103
PdmI GAANNNNTTC 2 cut(s) 522, 813
PfeI GAWTC 3 cut(s) 247, 695, 814
PflFI GACNNNGTC 1 cut(s) 1252
PflMI CCANNNNNTGG 1 cut(s) 156
PkrI GCNGC 6 cut(s) 107, 217, 235, 345, 801, 1203
PleI GAGTC 3 cut(s) 44, 272, 626
PpsI GAGTC 3 cut(s) 44, 272, 626
Ppu21I YACGTR 1 cut(s) 186
PscI ACATGT 1 cut(s) 924
PsiI TTATAA 1 cut(s) 411
Psp124BI GAGCTC 3 cut(s) 838, 996, 1036
PspN4I GGNNCC 1 cut(s) 71
PspPI GGNCC 2 cut(s) 332, 358
PsuI RGATCY 2 cut(s) 441, 556
PsyI GACNNNGTC 1 cut(s) 1252
RsaI GTAC 2 cut(s) 71, 303
RsaNI GTAC 2 cut(s) 70, 302
SacI GAGCTC 3 cut(s) 838, 996, 1036
SaqAI TTAA 7 cut(s) 198, 290, 321, 420, 509, 534, 1323
SatI GCNGC 6 cut(s) 106, 216, 234, 344, 800, 1202
Sau96I GGNCC 2 cut(s) 332, 358
SchI GAGTC 3 cut(s) 44, 272, 627
SduI GDGCHC 4 cut(s) 11, 838, 996, 1036
SfaNI GCATC 2 cut(s) 996, 1135
SgrAI CRCCGGYG 1 cut(s) 101
SinI GGWCC 1 cut(s) 358
SmlI CTYRAG 5 cut(s) 197, 228, 362, 419, 685
SmoI CTYRAG 5 cut(s) 197, 228, 362, 419, 685
SnaBI TACGTA 1 cut(s) 186
Sse9I AATT 6 cut(s) 143, 221, 252, 582, 1077, 1091
SseBI AGGCCT 2 cut(s) 595, 606
SsiI CCGC 3 cut(s) 105, 269, 1201
SspI AATATT 1 cut(s) 523
SstI GAGCTC 3 cut(s) 838, 996, 1036
StuI AGGCCT 2 cut(s) 595, 606
StyI CCWWGG 4 cut(s) 370, 997, 1041, 1232
TaaI ACNGT 4 cut(s) 154, 407, 743, 1244
TaiI ACGT 2 cut(s) 188, 1256
TaqI TCGA 8 cut(s) 48, 312, 768, 906, 1012, 1053, 1119, 1182
TasI AATT 6 cut(s) 143, 221, 252, 582, 1077, 1091
TauI GCSGC 2 cut(s) 108, 1204
TfiI GAWTC 3 cut(s) 247, 695, 814
Tru1I TTAA 7 cut(s) 198, 290, 321, 420, 509, 534, 1323
Tru9I TTAA 7 cut(s) 198, 290, 321, 420, 509, 534, 1323
TscAI CASTG 3 cut(s) 508, 879, 1223
TseFI GTSAC 3 cut(s) 619, 920, 1246
TseI GCWGC 4 cut(s) 215, 233, 343, 799
Tsp45I GTSAC 3 cut(s) 619, 920, 1246
TspDTI ATGAA 1 cut(s) 6
TspRI CASTG 3 cut(s) 508, 879, 1223
Tth111I GACNNNGTC 1 cut(s) 1252
Van91I CCANNNNNTGG 1 cut(s) 156
Vha464I CTTAAG 2 cut(s) 197, 419
VpaK11BI GGWCC 1 cut(s) 358
XagI CCTNNNNNAGG 2 cut(s) 600, 688
XapI RAATTY 3 cut(s) 252, 1077, 1091
XceI RCATGY 2 cut(s) 786, 928
XmnI GAANNNNTTC 2 cut(s) 522, 813
Zsp2I ATGCAT 2 cut(s) 356, 784
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.