Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007894

Physical Location & Seq

Genomic Coordinates Forward (+)

16857030 .. 16859620

Gene Structure 2591 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G35500.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1317 bp

ATGTCTTGTTCATCTTCTTCCGGATCAGAAGGAGAAGAAGAGGGTTTCGATGCTTACCGTAAAGGTGGTTATCACGCCGTCAGGATCGGCGATCCTTTTTCCGGTGGTCGTTACATCGCTCAGAGAAAGCTTGGTTGGGGTCAATTCTCCACCGTTTGGCTTGCCTACGATACGCTCACCTCTACTTATGTTGCTTTGAAGATTCAGAAGAGTGCACAACAATTTGCTCAAGCTGCACTTCACGAAATCGAATTTCTTTCAGCTGCTGCTGATGGGGATCTCGACAAGACGAAATGTGTTGTTCGTCTTATTGACCATTTCAAGCATAGTGGTCCAAATGGGCAGCATTTATGCATGGTGCTTGAGTTTCTCGGCGATAGCTTGCTCCGTTTAATCAGATACAACCAGTACAAAGGTCTGAAACTGAATAAAGTCCGGGAGATTTGCAGATGTATACTGACTGGTTTAGATTATTTGCACCGTGAGCTCGGTATGATTCACTCCGACTTAAAACCTGAAAACATTCTTCTTTGTTCCACCATTGACCCTGCCAAAGATCCCGTTAGATCTGGACTCACCCCACTATTAGAAAAACCAGAGGGAAACGCAAACGGTGGCGCATCAACAATGAATCTGATTGAGAAGAAACTAAAGAGAAGAGCGAAAAGAGCGGTTGCTAAAATATCAGAAAGAAGAGTCTCAATGGTTACAGGTGAAGAAGCATCATCGAAAACGGAAAAAAGTCTAGATGGGATTGATATGAGATGCAAAGTGGTTGACTTTGGTAACGCTTGTTGGGCTGATAAACAGTTTGCTGAAGAGATACAAACAAGACAGTATCGAGCTCCTGAAGTAATACTAAAGTCAGGATACTCTTTCTCTGTTGATATGTGGTCTTTTGGTTGTACGGCTTTCGAGCTTGTCACAGGAGATATGCTATTTGCACCTAAAGATGGAAATGGTTATGGGGAAGACGAGGATCACCTTGCTCTTATGATGGAACTCCTAGGAAAGATGCCTCGAAAGATTGCCATTGGAGGGGCGAAATCGAAAGACTACTTTGACAGACACGGGGACTTAAAGAGAATCCGACGGTTGAAATATTGGCCACTTGATCGCTTGCTGATTGATAAATATAAGCTTCCGGAAGCAGAAGCAAAGGAGTTTGCTGAGTTTCTGACTCCGATTCTTGAGTTTGCGCCGGAGAAACGACCAACTGCTCAACAGTGCTTGGATCATCCATGGATGAATGTAACAACACAGAACGATGCAGAAAATGTAGATGACCAAATGAACAACTTGCATATCAAAGGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

438

Amino Acids

49.31

Weight (kDa)

7.15

Isoelectric Point (pI)

35.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	39 - 179	1.4e-16	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	41 - 180	1.3e-06	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	256 - 417	2.3e-22	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007894)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17530 AT2G17530 AT2G17530 AT4G35500 AT4G35500
fragaria_vesca	FvH4_1g10250 FvH4_1g10250 FvH4_1g10250
malus_domestica	MD02G1114500.v1.1 MD15G1230200.v1.1
prunus_persica	Prupe.7G183700_v2.0.a1
pyrus_communis	pycom02g08940 pycom15g20530
rosa_chinensis	RchiOBHm_Chr2g0097071
rosa_laevigata	RLG00000016700
rosa_multiflora	Rmu_sc0006853.1_g000001 Rmu_sc0017953.1_g000004
rosa_roxburghii	Rroxscaffold_2G00145000
rosa_rugosa	Rorug02G0063400
rosa_samantha	Rh2AG111000 Rh2BG112900 Rh2CG115100 Rh2DG114300
rosa_wichuraiana	Rw2G008630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	156
AccBSI	CCGCTC	1 cut(s)	671
AccI	GTMKAC	1 cut(s)	454
AccIII	TCCGGA	2 cut(s)	20, 1144
AciI	CCGC	1 cut(s)	671
AclWI	GGATC	7 cut(s)	31, 86, 92, 285, 551, 987, 1242
AcoI	YGGCCR	1 cut(s)	1106
AcsI	RAATTY	1 cut(s)	251
AcuI	CTGAAG	2 cut(s)	837, 870
AfaI	GTAC	2 cut(s)	410, 907
AfiI	CCNNNNNNNGG	4 cut(s)	101, 156, 953, 1038
AgsI	TTSAA	3 cut(s)	199, 322, 1099
AjuI	GAANNNNNNNTTGG	2 cut(s)	118, 150
AluBI	AGCT	8 cut(s)	130, 233, 263, 381, 487, 845, 919, 1141
AluI	AGCT	8 cut(s)	130, 233, 263, 381, 487, 845, 919, 1141
Alw21I	GWGCWC	3 cut(s)	217, 489, 847
Alw26I	GTCTC	1 cut(s)	703
Alw44I	GTGCAC	1 cut(s)	213
AlwI	GGATC	7 cut(s)	31, 86, 92, 285, 551, 987, 1242
AlwNI	CAGNNNCTG	1 cut(s)	266
Aor13HI	TCCGGA	2 cut(s)	20, 1144
AoxI	GGCC	1 cut(s)	1106
ApaLI	GTGCAC	1 cut(s)	213
ApeKI	GCWGC	4 cut(s)	233, 263, 266, 343
ApoI	RAATTY	1 cut(s)	251
Asp700I	GAANNNNTTC	1 cut(s)	522
AspA2I	CCTAGG	1 cut(s)	1006
AspLEI	GCGC	2 cut(s)	620, 1201
AspS9I	GGNCC	1 cut(s)	332
AsuC2I	CCSGG	1 cut(s)	437
AsuHPI	GGTGA	4 cut(s)	169, 568, 725, 974
AvaII	GGWCC	1 cut(s)	332
AvrII	CCTAGG	1 cut(s)	1006
BaeGI	GKGCMC	1 cut(s)	217
BalI	TGGCCA	1 cut(s)	1108
BanII	GRGCYC	2 cut(s)	489, 847
BbsI	GAAGAC	1 cut(s)	978
Bbv12I	GWGCWC	3 cut(s)	217, 489, 847
BbvI	GCAGC	4 cut(s)	220, 250, 253, 355
BccI	CCATC	4 cut(s)	266, 743, 947, 991
BceAI	ACGGC	2 cut(s)	62, 924
BciVI	GTATCC	1 cut(s)	863
BcnI	CCSGG	1 cut(s)	437
BcoDI	GTCTC	1 cut(s)	703
BfaI	CTAG	2 cut(s)	746, 1007
BfuI	GTATCC	1 cut(s)	863
BglII	AGATCT	1 cut(s)	566
BisI	GCNGC	4 cut(s)	234, 264, 267, 344
BlnI	CCTAGG	1 cut(s)	1006
BlsI	GCNGC	4 cut(s)	235, 265, 268, 345
Bme1390I	CCNGG	1 cut(s)	437
Bme18I	GGWCC	1 cut(s)	332
BmgT120I	GGNCC	1 cut(s)	332
BmrFI	CCNGG	1 cut(s)	437
BmsI	GCATC	6 cut(s)	40, 629, 731, 755, 1005, 1258
BpiI	GAAGAC	1 cut(s)	978
BpuEI	CTTGAG	3 cut(s)	213, 383, 1211
BpuMI	CCSGG	1 cut(s)	437
BsaBI	GATNNNNATC	1 cut(s)	276
BsaJI	CCNNGG	2 cut(s)	1006, 1241
BsaWI	WCCGGW	3 cut(s)	20, 101, 1144
Bsc4I	CCNNNNNNNGG	4 cut(s)	101, 156, 953, 1038
Bse1I	ACTGG	2 cut(s)	406, 466
Bse8I	GATNNNNATC	1 cut(s)	276
BseAI	TCCGGA	2 cut(s)	20, 1144
BseDI	CCNNGG	2 cut(s)	1006, 1241
BseGI	GGATG	2 cut(s)	1237, 1251
BseJI	GATNNNNATC	1 cut(s)	276
BseLI	CCNNNNNNNGG	4 cut(s)	101, 156, 953, 1038
BseMII	CTCAG	2 cut(s)	134, 1161
BseNI	ACTGG	2 cut(s)	406, 466
BseSI	GKGCMC	1 cut(s)	217
BseXI	GCAGC	4 cut(s)	220, 250, 253, 355
BsgI	GTGCAG	1 cut(s)	219
BshFI	GGCC	1 cut(s)	1108
BsiHKAI	GWGCWC	3 cut(s)	217, 489, 847
BsiSI	CCGG	5 cut(s)	21, 102, 436, 1145, 1202
BslFI	GGGAC	1 cut(s)	1088
BslI	CCNNNNNNNGG	4 cut(s)	101, 156, 953, 1038
BsmAI	GTCTC	1 cut(s)	703
BsmFI	GGGAC	1 cut(s)	1088
BsnI	GGCC	1 cut(s)	1108
Bsp1286I	GDGCHC	3 cut(s)	217, 489, 847
Bsp13I	TCCGGA	2 cut(s)	20, 1144
Bsp143I	GATC	9 cut(s)	23, 84, 91, 277, 556, 566, 979, 1114, 1234
Bsp19I	CCATGG	1 cut(s)	1241
BspACI	CCGC	1 cut(s)	671
BspANI	GGCC	1 cut(s)	1108
BspCNI	CTCAG	2 cut(s)	133, 1162
BspEI	TCCGGA	2 cut(s)	20, 1144
BspPI	GGATC	7 cut(s)	31, 86, 92, 285, 551, 987, 1242
BspQI	GCTCTTC	1 cut(s)	652
BsrBI	CCGCTC	1 cut(s)	671
BsrI	ACTGG	2 cut(s)	406, 466
BssECI	CCNNGG	2 cut(s)	1006, 1241
BssMI	GATC	9 cut(s)	23, 84, 91, 277, 556, 566, 979, 1114, 1234
BssNAI	GTATAC	1 cut(s)	455
BssT1I	CCWWGG	2 cut(s)	1006, 1241
Bst1107I	GTATAC	1 cut(s)	455
Bst4CI	ACNGT	8 cut(s)	59, 154, 482, 614, 810, 837, 1095, 1227
Bst6I	CTCTTC	5 cut(s)	33, 203, 652, 688, 813
BstC8I	GCNNGC	3 cut(s)	162, 383, 1121
BstDEI	CTNAG	2 cut(s)	120, 1170
BstDSI	CCRYGG	1 cut(s)	1241
BstF5I	GGATG	2 cut(s)	1237, 1251
BstHHI	GCGC	2 cut(s)	620, 1201
BstKTI	GATC	9 cut(s)	26, 87, 94, 280, 559, 569, 982, 1117, 1237
BstMAI	GTCTC	1 cut(s)	703
BstMBI	GATC	9 cut(s)	23, 84, 91, 277, 556, 566, 979, 1114, 1234
BstMWI	GCNNNNNNNGC	4 cut(s)	233, 484, 668, 797
BstSCI	CCNGG	1 cut(s)	435
BstSLI	GKGCMC	1 cut(s)	217
BstV1I	GCAGC	4 cut(s)	220, 250, 253, 355
BstV2I	GAAGAC	1 cut(s)	978
BstX2I	RGATCY	3 cut(s)	277, 556, 566
BstYI	RGATCY	3 cut(s)	277, 556, 566
BstZ17I	GTATAC	1 cut(s)	455
BsuI	GTATCC	1 cut(s)	863
BsuRI	GGCC	1 cut(s)	1108
BtgI	CCRYGG	1 cut(s)	1241
BtgZI	GCGATG	1 cut(s)	100
BtsCI	GGATG	2 cut(s)	1237, 1251
BtsIMutI	CAGTG	1 cut(s)	1232
Cac8I	GCNNGC	3 cut(s)	162, 383, 1121
CaiI	CAGNNNCTG	1 cut(s)	266
CfoI	GCGC	2 cut(s)	620, 1201
Cfr13I	GGNCC	1 cut(s)	332
Csp6I	GTAC	2 cut(s)	409, 906
CspCI	CAANNNNNGTGG	2 cut(s)	310, 345
CviAII	CATG	2 cut(s)	355, 1242
CviQI	GTAC	2 cut(s)	409, 906
DdeI	CTNAG	2 cut(s)	120, 1170
DpnI	GATC	9 cut(s)	25, 86, 93, 279, 558, 568, 981, 1116, 1236
DpnII	GATC	9 cut(s)	23, 84, 91, 277, 556, 566, 979, 1114, 1234
EaeI	YGGCCR	1 cut(s)	1106
Eam1104I	CTCTTC	5 cut(s)	33, 203, 652, 688, 813
EarI	CTCTTC	5 cut(s)	33, 203, 652, 688, 813
Ecl136II	GAGCTC	2 cut(s)	487, 845
Eco130I	CCWWGG	2 cut(s)	1006, 1241
Eco24I	GRGCYC	2 cut(s)	489, 847
Eco47I	GGWCC	1 cut(s)	332
Eco53kI	GAGCTC	2 cut(s)	487, 845
Eco57I	CTGAAG	2 cut(s)	837, 870
EcoICRI	GAGCTC	2 cut(s)	487, 845
EcoT14I	CCWWGG	2 cut(s)	1006, 1241
EcoT22I	ATGCAT	1 cut(s)	356
EcoT38I	GRGCYC	2 cut(s)	489, 847
ErhI	CCWWGG	2 cut(s)	1006, 1241
FaeI	CATG	2 cut(s)	358, 1245
FalI	AAGNNNNNCTT	2 cut(s)	222, 254
FaqI	GGGAC	1 cut(s)	1088
FatI	CATG	2 cut(s)	354, 1241
FblI	GTMKAC	1 cut(s)	454
Fnu4HI	GCNGC	4 cut(s)	234, 264, 267, 344
FokI	GGATG	2 cut(s)	1224, 1258
FriOI	GRGCYC	2 cut(s)	489, 847
Fsp4HI	GCNGC	4 cut(s)	234, 264, 267, 344
FspBI	CTAG	2 cut(s)	746, 1007
GlaI	GCGC	2 cut(s)	619, 1200
GluI	GCNGC	4 cut(s)	234, 264, 267, 344
HaeIII	GGCC	1 cut(s)	1108
HapII	CCGG	5 cut(s)	21, 102, 436, 1145, 1202
HhaI	GCGC	2 cut(s)	620, 1201
Hin1II	CATG	2 cut(s)	358, 1245
Hin6I	GCGC	2 cut(s)	618, 1199
HinP1I	GCGC	2 cut(s)	618, 1199
HincII	GTYRAC	1 cut(s)	778
HindII	GTYRAC	1 cut(s)	778
HindIII	AAGCTT	2 cut(s)	128, 1139
HinfI	GANTC	8 cut(s)	202, 496, 573, 631, 696, 1086, 1180, 1186
HpaII	CCGG	5 cut(s)	21, 102, 436, 1145, 1202
HphI	GGTGA	4 cut(s)	169, 568, 725, 974
Hpy166II	GTNNAC	3 cut(s)	215, 455, 778
Hpy8I	GTNNAC	3 cut(s)	215, 455, 778
Hpy99I	CGWCG	1 cut(s)	1095
HpyAV	CCTTC	1 cut(s)	23
HpyCH4III	ACNGT	8 cut(s)	59, 154, 482, 614, 810, 837, 1095, 1227
HpyCH4V	TGCA	9 cut(s)	215, 236, 354, 447, 478, 768, 944, 1271, 1303
HpyF10VI	GCNNNNNNNGC	4 cut(s)	233, 484, 668, 797
HpyF3I	CTNAG	2 cut(s)	120, 1170
Hsp92II	CATG	2 cut(s)	358, 1245
HspAI	GCGC	2 cut(s)	618, 1199
Kpn2I	TCCGGA	2 cut(s)	20, 1144
Kzo9I	GATC	9 cut(s)	23, 84, 91, 277, 556, 566, 979, 1114, 1234
LguI	GCTCTTC	1 cut(s)	652
LmnI	GCTCC	2 cut(s)	390, 850
Lsp1109I	GCAGC	4 cut(s)	220, 250, 253, 355
LweI	GCATC	6 cut(s)	40, 629, 731, 755, 1005, 1258
MaeI	CTAG	2 cut(s)	746, 1007
MaeIII	GTNAC	5 cut(s)	110, 706, 785, 922, 1252
MalI	GATC	9 cut(s)	25, 86, 93, 279, 558, 568, 981, 1116, 1236
MbiI	CCGCTC	1 cut(s)	671
MboI	GATC	9 cut(s)	23, 84, 91, 277, 556, 566, 979, 1114, 1234
MflI	RGATCY	3 cut(s)	277, 556, 566
MhlI	GDGCHC	3 cut(s)	217, 489, 847
MlsI	TGGCCA	1 cut(s)	1108
MluCI	AATT	3 cut(s)	143, 221, 251
MluNI	TGGCCA	1 cut(s)	1108
MlyI	GAGTC	3 cut(s)	567, 705, 1174
MmeI	TCCRAC	2 cut(s)	528, 1114
MnlI	CCTC	6 cut(s)	34, 190, 592, 970, 1029, 1031
Mox20I	TGGCCA	1 cut(s)	1108
Mph1103I	ATGCAT	1 cut(s)	356
MroI	TCCGGA	2 cut(s)	20, 1144
MroXI	GAANNNNTTC	1 cut(s)	522
MscI	TGGCCA	1 cut(s)	1108
MseI	TTAA	3 cut(s)	392, 509, 1079
Msp20I	TGGCCA	1 cut(s)	1108
MspA1I	CMGCKG	1 cut(s)	263
MspI	CCGG	5 cut(s)	21, 102, 436, 1145, 1202
MspR9I	CCNGG	1 cut(s)	437
MwoI	GCNNNNNNNGC	4 cut(s)	233, 484, 668, 797
NciI	CCSGG	1 cut(s)	437
NcoI	CCATGG	1 cut(s)	1241
NdeII	GATC	9 cut(s)	23, 84, 91, 277, 556, 566, 979, 1114, 1234
NlaIII	CATG	2 cut(s)	358, 1245
NmeAIII	GCCGAG	1 cut(s)	351
NmuCI	GTSAC	1 cut(s)	922
NsiI	ATGCAT	1 cut(s)	356
PciSI	GCTCTTC	1 cut(s)	652
PdmI	GAANNNNTTC	1 cut(s)	522
PfeI	GAWTC	5 cut(s)	202, 496, 631, 1086, 1186
PflMI	CCANNNNNTGG	1 cut(s)	156
PfoI	TCCNGGA	1 cut(s)	435
PkrI	GCNGC	4 cut(s)	235, 265, 268, 345
PleI	GAGTC	3 cut(s)	567, 704, 1174
PpsI	GAGTC	3 cut(s)	567, 704, 1174
Psp124BI	GAGCTC	2 cut(s)	489, 847
PspPI	GGNCC	1 cut(s)	332
PstNI	CAGNNNCTG	1 cut(s)	266
PsuI	RGATCY	3 cut(s)	277, 556, 566
PvuII	CAGCTG	1 cut(s)	263
RsaI	GTAC	2 cut(s)	410, 907
RsaNI	GTAC	2 cut(s)	409, 906
SacI	GAGCTC	2 cut(s)	489, 847
SapI	GCTCTTC	1 cut(s)	652
SaqAI	TTAA	3 cut(s)	392, 509, 1079
SatI	GCNGC	4 cut(s)	234, 264, 267, 344
Sau3AI	GATC	9 cut(s)	23, 84, 91, 277, 556, 566, 979, 1114, 1234
Sau96I	GGNCC	1 cut(s)	332
SchI	GAGTC	3 cut(s)	567, 705, 1174
ScrFI	CCNGG	1 cut(s)	437
SduI	GDGCHC	3 cut(s)	217, 489, 847
SfaNI	GCATC	6 cut(s)	40, 629, 731, 755, 1005, 1258
SinI	GGWCC	1 cut(s)	332
SmlI	CTYRAG	3 cut(s)	228, 362, 1190
SmoI	CTYRAG	3 cut(s)	228, 362, 1190
Sse9I	AATT	3 cut(s)	143, 221, 251
SsiI	CCGC	1 cut(s)	671
SspI	AATATT	1 cut(s)	1103
SspMI	CTAG	2 cut(s)	746, 1007
SstI	GAGCTC	2 cut(s)	489, 847
StyD4I	CCNGG	1 cut(s)	435
StyI	CCWWGG	2 cut(s)	1006, 1241
TaaI	ACNGT	8 cut(s)	59, 154, 482, 614, 810, 837, 1095, 1227
TaqI	TCGA	8 cut(s)	48, 249, 282, 728, 841, 915, 1021, 1049
TasI	AATT	3 cut(s)	143, 221, 251
TatI	WGTACW	1 cut(s)	408
TfiI	GAWTC	5 cut(s)	202, 496, 631, 1086, 1186
Tru1I	TTAA	3 cut(s)	392, 509, 1079
Tru9I	TTAA	3 cut(s)	392, 509, 1079
TscAI	CASTG	1 cut(s)	1232
TseFI	GTSAC	1 cut(s)	922
TseI	GCWGC	4 cut(s)	233, 263, 266, 343
Tsp45I	GTSAC	1 cut(s)	922
TspDTI	ATGAA	3 cut(s)	644, 1262, 1307
TspGWI	ACGGA	2 cut(s)	377, 749
TspRI	CASTG	1 cut(s)	1232
Van91I	CCANNNNNTGG	1 cut(s)	156
VneI	GTGCAC	1 cut(s)	213
VpaK11BI	GGWCC	1 cut(s)	332
XapI	RAATTY	1 cut(s)	251
XbaI	TCTAGA	1 cut(s)	745
XmaJI	CCTAGG	1 cut(s)	1006
XmiI	GTMKAC	1 cut(s)	454
XmnI	GAANNNNTTC	1 cut(s)	522
XspI	CTAG	2 cut(s)	746, 1007
Zsp2I	ATGCAT	1 cut(s)	356

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.