Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0007894

Physical Location & Seq

Genomic Coordinates Forward (+)

9311482 .. 9314505

Gene Structure 3024 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1114500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1338 bp

ATGTCGTGCTCATCTTCATCTGGGTCGGAGGAGGACGATGAGGGCATCGACTCCTACAGGAAAGGAGGCTACCACGCCGTCAGGGTCGGCGATCAGTTCAACGGCGGCCGCTACGTGGCTCAGAGGAAGCTCGGTTGGGGTCAGTTCTCCACCGTCTGGCTCGCTTACGACACCACCACCTCTATGTACGTTGCTCTTAAGATTCAGAAAAGTGCAGCACAGTTTGCTCAAGCCGCTCTTCATGAGATTGAACTTCTTTCTAGTATTGCGGAAGGCGACCCCATGCATTCCAAGTGTGTTGTGCGACTGATTGACCATTTTAAGCACGCAGGCCCGAACGGGCAGCATCAATGCATGGTCCTTGAGTTTCTTGGCGATAGCTTACTTCGGCTGATCAAGTATAACCGTTACAAAGGCCTTAAGTTGAATAAAGTTAGGGAGATCTGCAAATACATACTGATAGGTCTCGACTATTTGCATAGAGAACTTGGTATAATCCACACTGACCTCAAACCCGAAAACATTCTTCTCTGTAACACCATTGATCCTGCCAAAGATCCAGTCAGGGCTGGCCTCACACCAATTCTGGAAAGGCCTGAAGGGAACCTGAAGGGTGGAGCCACCATGACTCTTGTTGAGAAAAAGTTGAAAAGGAGGGCAAGGAAGGCAGTTGCTAAGATTTCGTTGAGAAGAGAATCTATGGGAGTTATTGAACTTCCCAAGTCCGAAAGAAACCTGGATGGGAATGATGTAAAGTGCAAGGTTGTTGATTTCGGAAATGGATGTTGGGCCAACAAGCAAATTGCAGAAGAGATTCAAACAAGGCAGTATAGAGCTCCTGAAGTTATCCTTCGATCTGGTTATTCTTACTCAGTTGATATGTGGTCCTTTGCCTGCACTGCCTTCGAGCTTGCAACTGGCGACATGTTGTTTGCTCCAAAGGTGGGACAGGGCTTTAGTGAGGATGAGGACCACCTTGCATTGATGATGGAACTCCTTGGGAAGATGCCTCGAAAGGTAGCAATTGGTGGAGCTCGTTCCAAGGACTTCTTTGATCGACATGGTGATCTAAAGAGAATCCGCAGGCTGAAGTTTTGGCCACTCGATAAAATACTGATTGATAGGTACAAATTTTCAGAGACTGATGCTCGGGAGTTTGCAGAGTTTCTTTGCCCCATTTTCGACTTTGCACCAGAGAAGCGGCCAACAACTCAACAGTGCCTCCAACACCCGTGGATCATTGGCAGTACTTCGAACCAGAGCGAGATGAAAAATAAATCTAAAGTGGAAAAGGTGAATGTTGGGATGAGCAACCATCAGATCAAGGTTGGCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

446

Amino Acids

50.33

Weight (kDa)

9.08

Isoelectric Point (pI)

41.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	38 - 179	1.6e-21	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	41 - 179	1.8e-09	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	249 - 413	1.2e-19	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007894)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G17530 AT2G17530 AT2G17530 AT4G35500 AT4G35500
fragaria_vesca	FvH4_1g10250 FvH4_1g10250 FvH4_1g10250
malus_domestica	MD02G1114500.v1.1 MD15G1230200.v1.1
prunus_persica	Prupe.7G183700_v2.0.a1
pyrus_communis	pycom02g08940 pycom15g20530
rosa_chinensis	RchiOBHm_Chr2g0097071
rosa_laevigata	RLG00000016700
rosa_multiflora	Rmu_sc0006853.1_g000001 Rmu_sc0017953.1_g000004
rosa_roxburghii	Rroxscaffold_2G00145000
rosa_rugosa	Rorug02G0063400
rosa_samantha	Rh2AG111000 Rh2BG112900 Rh2CG115100 Rh2DG114300
rosa_wichuraiana	Rw2G008630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	156
AccBSI	CCGCTC	1 cut(s)	236
AciI	CCGC	6 cut(s)	105, 109, 234, 269, 1081, 1201
AclWI	GGATC	3 cut(s)	539, 551, 1244
AcoI	YGGCCR	3 cut(s)	106, 1097, 1202
AcsI	RAATTY	1 cut(s)	1130
AcuI	CTGAAG	4 cut(s)	618, 629, 861, 1109
AfaI	GTAC	3 cut(s)	188, 1127, 1249
AfiI	CCNNNNNNNGG	3 cut(s)	115, 156, 944
AflII	CTTAAG	2 cut(s)	197, 419
AflIII	ACRYGT	1 cut(s)	924
AgsI	TTSAA	6 cut(s)	100, 251, 427, 649, 713, 818
AjnI	CCWGG	1 cut(s)	735
AjuI	GAANNNNNNNTTGG	2 cut(s)	769, 801
AluBI	AGCT	5 cut(s)	130, 381, 836, 910, 1034
AluI	AGCT	5 cut(s)	130, 381, 836, 910, 1034
Alw21I	GWGCWC	3 cut(s)	11, 838, 1036
Alw26I	GTCTC	2 cut(s)	470, 1133
AlwI	GGATC	3 cut(s)	539, 551, 1244
AlwNI	CAGNNNCTG	1 cut(s)	1142
Ama87I	CYCGRG	1 cut(s)	1149
AoxI	GGCC	8 cut(s)	106, 331, 415, 571, 593, 789, 1097, 1202
ApeKI	GCWGC	2 cut(s)	215, 343
ApoI	RAATTY	1 cut(s)	1130
ArsI	GACNNNNNNTTYG	4 cut(s)	546, 578, 914, 946
Asp700I	GAANNNNTTC	2 cut(s)	522, 813
AspS9I	GGNCC	5 cut(s)	332, 358, 789, 885, 970
AsuHPI	GGTGA	2 cut(s)	1076, 1306
AsuII	TTCGAA	1 cut(s)	1253
AvaI	CYCGRG	1 cut(s)	1149
AvaII	GGWCC	3 cut(s)	358, 885, 970
BalI	TGGCCA	1 cut(s)	1099
BanII	GRGCYC	2 cut(s)	838, 1036
Bbv12I	GWGCWC	3 cut(s)	11, 838, 1036
BbvI	GCAGC	2 cut(s)	227, 355
BccI	CCATC	3 cut(s)	734, 982, 1323
BceAI	ACGGC	2 cut(s)	62, 118
BcgI	CGANNNNNNTGC	2 cut(s)	886, 920
BciT130I	CCWGG	1 cut(s)	737
BclI	TGATCA	1 cut(s)	393
BcoDI	GTCTC	2 cut(s)	470, 1133
BfaI	CTAG	1 cut(s)	261
BfmI	CTRYAG	1 cut(s)	55
BfrI	CTTAAG	2 cut(s)	197, 419
BglII	AGATCT	1 cut(s)	441
BisI	GCNGC	6 cut(s)	106, 109, 216, 234, 344, 1202
BlsI	GCNGC	6 cut(s)	107, 110, 217, 235, 345, 1203
BmcAI	AGTACT	1 cut(s)	1249
Bme1390I	CCNGG	1 cut(s)	737
Bme18I	GGWCC	3 cut(s)	358, 885, 970
BmeT110I	CYCGRG	1 cut(s)	1149
BmgT120I	GGNCC	5 cut(s)	332, 358, 789, 885, 970
BmiI	GGNNCC	2 cut(s)	605, 619
BmrFI	CCNGG	1 cut(s)	737
BmsI	GCATC	4 cut(s)	54, 355, 996, 1135
Bpu14I	TTCGAA	1 cut(s)	1253
BpuEI	CTTGAG	2 cut(s)	213, 383
BsaAI	YACGTR	1 cut(s)	115
BsaI	GGTCTC	1 cut(s)	470
BsaJI	CCNNGG	3 cut(s)	997, 1041, 1232
BsaXI	ACNNNNNCTCC	2 cut(s)	1206, 1236
Bsc4I	CCNNNNNNNGG	3 cut(s)	115, 156, 944
Bse1I	ACTGG	2 cut(s)	560, 922
BseBI	CCWGG	1 cut(s)	737
BseDI	CCNNGG	3 cut(s)	997, 1041, 1232
BseGI	GGATG	4 cut(s)	745, 788, 970, 1311
BseLI	CCNNNNNNNGG	3 cut(s)	115, 156, 944
BseMII	CTCAG	2 cut(s)	134, 885
BseNI	ACTGG	2 cut(s)	560, 922
BseRI	GAGGAG	1 cut(s)	44
BseX3I	CGGCCG	1 cut(s)	106
BseXI	GCAGC	2 cut(s)	227, 355
BsgI	GTGCAG	2 cut(s)	234, 880
Bsh1285I	CGRYCG	1 cut(s)	109
BshFI	GGCC	8 cut(s)	108, 333, 417, 573, 595, 791, 1099, 1204
BsiEI	CGRYCG	1 cut(s)	109
BsiHKAI	GWGCWC	3 cut(s)	11, 838, 1036
BsiHKCI	CYCGRG	1 cut(s)	1149
BslFI	GGGAC	1 cut(s)	960
BslI	CCNNNNNNNGG	3 cut(s)	115, 156, 944
BsmAI	GTCTC	2 cut(s)	470, 1133
BsmFI	GGGAC	1 cut(s)	960
BsmI	GAATGC	1 cut(s)	286
BsnI	GGCC	8 cut(s)	108, 333, 417, 573, 595, 791, 1099, 1204
Bso31I	GGTCTC	1 cut(s)	470
BsoBI	CYCGRG	1 cut(s)	1149
Bsp119I	TTCGAA	1 cut(s)	1253
Bsp1286I	GDGCHC	3 cut(s)	11, 838, 1036
BspACI	CCGC	6 cut(s)	105, 109, 234, 269, 1081, 1201
BspANI	GGCC	8 cut(s)	108, 333, 417, 573, 595, 791, 1099, 1204
BspCNI	CTCAG	2 cut(s)	133, 884
BspHI	TCATGA	1 cut(s)	241
BspLI	GGNNCC	2 cut(s)	605, 619
BspPI	GGATC	3 cut(s)	539, 551, 1244
BspQI	GCTCTTC	1 cut(s)	243
BspT104I	TTCGAA	1 cut(s)	1253
BspTI	CTTAAG	2 cut(s)	197, 419
BspTNI	GGTCTC	1 cut(s)	470
BsrBI	CCGCTC	1 cut(s)	236
BsrI	ACTGG	2 cut(s)	560, 922
BssECI	CCNNGG	3 cut(s)	997, 1041, 1232
BssT1I	CCWWGG	2 cut(s)	997, 1041
Bst2UI	CCWGG	1 cut(s)	737
Bst4CI	ACNGT	4 cut(s)	154, 222, 407, 1218
Bst6I	CTCTTC	3 cut(s)	243, 685, 804
BstAFI	CTTAAG	2 cut(s)	197, 419
BstAPI	GCANNNNNTGC	1 cut(s)	224
BstBAI	YACGTR	1 cut(s)	115
BstBI	TTCGAA	1 cut(s)	1253
BstC8I	GCNNGC	7 cut(s)	162, 327, 331, 571, 895, 912, 1085
BstDEI	CTNAG	3 cut(s)	120, 675, 871
BstDSI	CCRYGG	1 cut(s)	1232
BstF5I	GGATG	4 cut(s)	745, 788, 970, 1311
BstMAI	GTCTC	2 cut(s)	470, 1133
BstMCI	CGRYCG	1 cut(s)	109
BstMWI	GCNNNNNNNGC	4 cut(s)	224, 233, 665, 899
BstNI	CCWGG	1 cut(s)	737
BstNSI	RCATGY	1 cut(s)	928
BstSCI	CCNGG	1 cut(s)	735
BstSFI	CTRYAG	1 cut(s)	55
BstV1I	GCAGC	2 cut(s)	227, 355
BstX2I	RGATCY	2 cut(s)	441, 556
BstYI	RGATCY	2 cut(s)	441, 556
BstZI	CGGCCG	1 cut(s)	106
BsuRI	GGCC	8 cut(s)	108, 333, 417, 573, 595, 791, 1099, 1204
BtgI	CCRYGG	1 cut(s)	1232
BtsCI	GGATG	4 cut(s)	745, 788, 970, 1311
BtsI	GCAGTG	1 cut(s)	897
BtsIMutI	CAGTG	3 cut(s)	501, 897, 1223
Cac8I	GCNNGC	7 cut(s)	162, 327, 331, 571, 895, 912, 1085
CaiI	CAGNNNCTG	1 cut(s)	1142
CciI	TCATGA	1 cut(s)	241
CciNI	GCGGCCGC	1 cut(s)	106
Cfr13I	GGNCC	5 cut(s)	332, 358, 789, 885, 970
Csp6I	GTAC	3 cut(s)	187, 1126, 1248
CspCI	CAANNNNNGTGG	2 cut(s)	1214, 1249
CviAII	CATG	6 cut(s)	242, 283, 355, 625, 925, 1061
CviQI	GTAC	3 cut(s)	187, 1126, 1248
DdeI	CTNAG	3 cut(s)	120, 675, 871
EaeI	YGGCCR	3 cut(s)	106, 1097, 1202
EagI	CGGCCG	1 cut(s)	106
Eam1104I	CTCTTC	3 cut(s)	243, 685, 804
EarI	CTCTTC	3 cut(s)	243, 685, 804
Ecl136II	GAGCTC	2 cut(s)	836, 1034
EclXI	CGGCCG	1 cut(s)	106
Eco130I	CCWWGG	2 cut(s)	997, 1041
Eco147I	AGGCCT	2 cut(s)	417, 595
Eco24I	GRGCYC	2 cut(s)	838, 1036
Eco31I	GGTCTC	1 cut(s)	470
Eco47I	GGWCC	3 cut(s)	358, 885, 970
Eco52I	CGGCCG	1 cut(s)	106
Eco53kI	GAGCTC	2 cut(s)	836, 1034
Eco57I	CTGAAG	4 cut(s)	618, 629, 861, 1109
Eco88I	CYCGRG	1 cut(s)	1149
EcoICRI	GAGCTC	2 cut(s)	836, 1034
EcoRII	CCWGG	1 cut(s)	735
EcoT14I	CCWWGG	2 cut(s)	997, 1041
EcoT22I	ATGCAT	2 cut(s)	288, 356
EcoT38I	GRGCYC	2 cut(s)	838, 1036
ErhI	CCWWGG	2 cut(s)	997, 1041
FaeI	CATG	6 cut(s)	245, 286, 358, 628, 928, 1064
FalI	AAGNNNNNCTT	6 cut(s)	222, 254, 834, 866, 1034, 1066
FaqI	GGGAC	1 cut(s)	960
FatI	CATG	6 cut(s)	241, 282, 354, 624, 924, 1060
FbaI	TGATCA	1 cut(s)	393
Fnu4HI	GCNGC	6 cut(s)	106, 109, 216, 234, 344, 1202
FokI	GGATG	4 cut(s)	752, 795, 977, 1318
FriOI	GRGCYC	2 cut(s)	838, 1036
Fsp4HI	GCNGC	6 cut(s)	106, 109, 216, 234, 344, 1202
FspBI	CTAG	1 cut(s)	261
GluI	GCNGC	6 cut(s)	106, 109, 216, 234, 344, 1202
HaeIII	GGCC	8 cut(s)	108, 333, 417, 573, 595, 791, 1099, 1204
Hin1II	CATG	6 cut(s)	245, 286, 358, 628, 928, 1064
HinfI	GANTC	6 cut(s)	50, 202, 628, 695, 814, 1077
HphI	GGTGA	2 cut(s)	1076, 1306
Hpy188I	TCNGA	7 cut(s)	28, 123, 207, 727, 776, 1138, 1320
Hpy188III	TCNNGA	5 cut(s)	242, 467, 587, 839, 1151
HpyAV	CCTTC	6 cut(s)	266, 593, 604, 658, 860, 913
HpyCH4III	ACNGT	4 cut(s)	154, 222, 407, 1218
HpyCH4IV	ACGT	2 cut(s)	114, 189
HpyF10VI	GCNNNNNNNGC	4 cut(s)	224, 233, 665, 899
HpyF3I	CTNAG	3 cut(s)	120, 675, 871
HpySE526I	ACGT	2 cut(s)	114, 189
Hsp92II	CATG	6 cut(s)	245, 286, 358, 628, 928, 1064
Ksp22I	TGATCA	1 cut(s)	393
LguI	GCTCTTC	1 cut(s)	243
LmnI	GCTCC	4 cut(s)	617, 841, 940, 1031
Lsp1109I	GCAGC	2 cut(s)	227, 355
LweI	GCATC	4 cut(s)	54, 355, 996, 1135
MaeI	CTAG	1 cut(s)	261
MaeII	ACGT	2 cut(s)	114, 189
MaeIII	GTNAC	2 cut(s)	407, 533
MbiI	CCGCTC	1 cut(s)	236
MboII	GAAGA	6 cut(s)	6, 230, 518, 702, 821, 1015
MfeI	CAATTG	1 cut(s)	1023
MflI	RGATCY	2 cut(s)	441, 556
MhlI	GDGCHC	3 cut(s)	11, 838, 1036
MlsI	TGGCCA	1 cut(s)	1099
MluCI	AATT	4 cut(s)	582, 801, 1023, 1130
MluNI	TGGCCA	1 cut(s)	1099
MlyI	GAGTC	2 cut(s)	44, 622
MmeI	TCCRAC	2 cut(s)	6, 1249
Mox20I	TGGCCA	1 cut(s)	1099
Mph1103I	ATGCAT	2 cut(s)	288, 356
MroXI	GAANNNNTTC	2 cut(s)	522, 813
MscI	TGGCCA	1 cut(s)	1099
MseI	TTAA	3 cut(s)	198, 321, 420
MslI	CAYNNNNRTG	1 cut(s)	182
Msp20I	TGGCCA	1 cut(s)	1099
MspCI	CTTAAG	2 cut(s)	197, 419
MspR9I	CCNGG	1 cut(s)	737
MunI	CAATTG	1 cut(s)	1023
Mva1269I	GAATGC	1 cut(s)	286
MvaI	CCWGG	1 cut(s)	737
MwoI	GCNNNNNNNGC	4 cut(s)	224, 233, 665, 899
NlaIII	CATG	6 cut(s)	245, 286, 358, 628, 928, 1064
NlaIV	GGNNCC	2 cut(s)	605, 619
NotI	GCGGCCGC	1 cut(s)	106
NsiI	ATGCAT	2 cut(s)	288, 356
NspI	RCATGY	1 cut(s)	928
NspV	TTCGAA	1 cut(s)	1253
PagI	TCATGA	1 cut(s)	241
PceI	AGGCCT	2 cut(s)	417, 595
PciI	ACATGT	1 cut(s)	924
PciSI	GCTCTTC	1 cut(s)	243
PctI	GAATGC	1 cut(s)	286
PdmI	GAANNNNTTC	2 cut(s)	522, 813
PfeI	GAWTC	4 cut(s)	202, 695, 814, 1077
PflMI	CCANNNNNTGG	1 cut(s)	156
PkrI	GCNGC	6 cut(s)	107, 110, 217, 235, 345, 1203
PleI	GAGTC	2 cut(s)	44, 622
PpsI	GAGTC	2 cut(s)	44, 622
Ppu21I	YACGTR	1 cut(s)	115
PscI	ACATGT	1 cut(s)	924
Psp124BI	GAGCTC	2 cut(s)	838, 1036
Psp6I	CCWGG	1 cut(s)	735
PspGI	CCWGG	1 cut(s)	735
PspN4I	GGNNCC	2 cut(s)	605, 619
PspPI	GGNCC	5 cut(s)	332, 358, 789, 885, 970
PstNI	CAGNNNCTG	1 cut(s)	1142
PsuI	RGATCY	2 cut(s)	441, 556
RsaI	GTAC	3 cut(s)	188, 1127, 1249
RsaNI	GTAC	3 cut(s)	187, 1126, 1248
RseI	CAYNNNNRTG	1 cut(s)	182
SacI	GAGCTC	2 cut(s)	838, 1036
SapI	GCTCTTC	1 cut(s)	243
SaqAI	TTAA	3 cut(s)	198, 321, 420
SatI	GCNGC	6 cut(s)	106, 109, 216, 234, 344, 1202
Sau96I	GGNCC	5 cut(s)	332, 358, 789, 885, 970
ScaI	AGTACT	1 cut(s)	1249
SchI	GAGTC	2 cut(s)	44, 622
ScrFI	CCNGG	1 cut(s)	737
SduI	GDGCHC	3 cut(s)	11, 838, 1036
SfaNI	GCATC	4 cut(s)	54, 355, 996, 1135
SfcI	CTRYAG	1 cut(s)	55
SfuI	TTCGAA	1 cut(s)	1253
SinI	GGWCC	3 cut(s)	358, 885, 970
SmiMI	CAYNNNNRTG	1 cut(s)	182
SmlI	CTYRAG	4 cut(s)	197, 228, 362, 419
SmoI	CTYRAG	4 cut(s)	197, 228, 362, 419
Sse9I	AATT	4 cut(s)	582, 801, 1023, 1130
SseBI	AGGCCT	2 cut(s)	417, 595
SsiI	CCGC	6 cut(s)	105, 109, 234, 269, 1081, 1201
SspMI	CTAG	1 cut(s)	261
SstI	GAGCTC	2 cut(s)	838, 1036
StuI	AGGCCT	2 cut(s)	417, 595
StyD4I	CCNGG	1 cut(s)	735
StyI	CCWWGG	2 cut(s)	997, 1041
TaaI	ACNGT	4 cut(s)	154, 222, 407, 1218
TaiI	ACGT	2 cut(s)	117, 192
TaqI	TCGA	9 cut(s)	48, 468, 853, 906, 1012, 1057, 1104, 1182, 1253
TasI	AATT	4 cut(s)	582, 801, 1023, 1130
TatI	WGTACW	1 cut(s)	1247
TauI	GCSGC	4 cut(s)	108, 111, 236, 1204
TfiI	GAWTC	4 cut(s)	202, 695, 814, 1077
Tru1I	TTAA	3 cut(s)	198, 321, 420
Tru9I	TTAA	3 cut(s)	198, 321, 420
TscAI	CASTG	3 cut(s)	508, 904, 1223
TseI	GCWGC	2 cut(s)	215, 343
TspDTI	ATGAA	3 cut(s)	6, 230, 1283
TspRI	CASTG	3 cut(s)	508, 904, 1223
Van91I	CCANNNNNTGG	1 cut(s)	156
Vha464I	CTTAAG	2 cut(s)	197, 419
VpaK11BI	GGWCC	3 cut(s)	358, 885, 970
XapI	RAATTY	1 cut(s)	1130
XceI	RCATGY	1 cut(s)	928
XmnI	GAANNNNTTC	2 cut(s)	522, 813
XspI	CTAG	1 cut(s)	261
ZrmI	AGTACT	1 cut(s)	1249
Zsp2I	ATGCAT	2 cut(s)	288, 356

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.