AT2G22360

dnaJ homolog 1

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
9497570 .. 9500719
3150 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G22360.1

Sequence Viewer

Length: 1329 bp
ATGGCTATAATACAACTTGGAAGTACATGTGTTGCTCAATGGAGTATTCGTCCTCAATTTGCAGTCAGAGCTTATTATCCCAGCAGAATCGAATCAACTCGCCATCAAAATTCCAGTAGCCAAGTAAATTGTTTGGGAGCTTCAAAGTCGAGTATGTTCTCACATGGGTCATTGCCCTTCTTGTCCATGACGGGAATGTCCAGAAATATGCATCCTCCTCGCAGAGGATCTCGCTTCACTGTTAGAGCTGATGCAGATTACTATTCGGTACTCGGAGTTTCGAAAAATGCAACCAAAGCTGAGATTAAAAGCGCTTATCGGAAGCTGGCTAGGAATTACCATCCGGATGTGAACAAGGATCCTGGCGCAGAAGAGAAATTCAAAGAAATAAGTAACGCATATGAGGTTTTATCAGATGATGAAAAGAAATCTCTTTACGATAGGTATGGTGAGGCCGGACTTAAAGGCGCTGCTGGATTTGGCAATGGGGATTTTAGTAATCCGTTCGATCTATTCGACTCATTATTCGAAGGCTTCGGTGGTGGGATGGGTAGAGGTTCAAGAAGCAGAGCTGTGGATGGTCAAGACGAGTATTACACGCTAATCTTAAACTTCAAAGAAGCGGTTTTCGGAATGGAGAAAGAAATAGAGATATCCCGGCTCGAGAGCTGTGGGACATGTGAAGGTTCAGGTGCAAAACCTGGAACCAAACCGACCAAATGCACCACGTGTGGCGGACAAGGCCAAGTGGTTTCAGCAGCTAGAACTCCTCTGGGCGTGTTCCAACAAGTCATGACTTGCTCGTCCTGTAATGGCACTGGAGAGATCTCGACGCCGTGTGGTACTTGCTCTGGAGACGGACGCGTGAGGAAGACAAAACGGATAAGTCTCAAAGTACCAGCCGGGGTTGATTCAGGTAGCCGGTTGAGAGTGAGAGGAGAAGGCAATGCCGGGAAGAGAGGCGGATCACCAGGCGATCTGTTTGTTGTTATAGAAGTTATCCCAGACCCGATTTTGAAACGAGACGATACAAATATTCTCTACACTTGCAAGATATCGTATATCGATGCGATTTTAGGGACGACACTGAAAGTACCAACAGTGGATGGGACAGTAGATTTGAAAGTTCCAGCTGGGACACAACCTAGCACGACGCTTGTGATGGCGAAAAAAGGAGTTCCGGTATTGAACAAGAGTAATATGAGAGGAGATCAGTTGGTGAGAGTACAAGTGGAGATACCTAAGAGATTGAGCAAAGAGGAGAAAAAACTTATTGAAGAGCTTGCTGATATGAGCAAGAACAAGACTGCTAATAGCACCAGTAGATGA

Protein Analysis

442

Amino Acids

47.76

Weight (kDa)

9.25

Isoelectric Point (pI)

39.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 86 - 147 5.4e-28 DnaJ domain
DnaJ_C PF01556 199 - 414 8e-46 DnaJ C terminal domain
DnaJ_CXXCXGXG PF00684 224 - 287 7.6e-15 DnaJ central domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 196, 802
AccII CGCG 1 cut(s) 864
AccIII TCCGGA 1 cut(s) 343
AciI CCGC 3 cut(s) 623, 735, 963
AclWI GGATC 4 cut(s) 235, 353, 366, 973
AcsI RAATTY 2 cut(s) 109, 377
AcvI CACGTG 1 cut(s) 729
AcyI GRCGYC 1 cut(s) 833
AdeI CACNNNGTG 1 cut(s) 729
AfaI GTAC 6 cut(s) 25, 270, 844, 897, 1095, 1227
AfeI AGCGCT 1 cut(s) 313
AfiI CCNNNNNNNGG 1 cut(s) 224
AflIII ACRYGT 4 cut(s) 26, 677, 728, 862
AgsI TTSAA 8 cut(s) 144, 382, 561, 616, 1018, 1123, 1189, 1277
AjnI CCWGG 3 cut(s) 361, 700, 970
Alw26I GTCTC 3 cut(s) 849, 893, 1017
AlwI GGATC 4 cut(s) 235, 353, 366, 973
Ama87I CYCGRG 1 cut(s) 662
Aor13HI TCCGGA 1 cut(s) 343
Aor51HI AGCGCT 1 cut(s) 313
AoxI GGCC 2 cut(s) 453, 742
ApeKI GCWGC 2 cut(s) 470, 758
ApoI RAATTY 2 cut(s) 109, 377
ArsI GACNNNNNNTTYG 4 cut(s) 509, 541, 1102, 1134
AspLEI GCGC 3 cut(s) 314, 368, 470
AsuC2I CCSGG 3 cut(s) 658, 904, 952
AsuHPI GGTGA 3 cut(s) 461, 960, 1231
AsuII TTCGAA 2 cut(s) 281, 528
AvaI CYCGRG 1 cut(s) 662
BamHI GGATCC 1 cut(s) 358
BbrPI CACGTG 1 cut(s) 729
BbsI GAAGAC 1 cut(s) 878
BbvI GCAGC 2 cut(s) 457, 770
BccI CCATC 6 cut(s) 111, 348, 541, 572, 1100, 1156
BceAI ACGGC 1 cut(s) 820
BcgI CGANNNNNNTGC 2 cut(s) 200, 234
BciT130I CCWGG 3 cut(s) 363, 702, 972
BcnI CCSGG 3 cut(s) 658, 904, 952
BcoDI GTCTC 3 cut(s) 849, 893, 1017
BfaI CTAG 3 cut(s) 330, 762, 1146
BfoI RGCGCY 2 cut(s) 315, 471
BglII AGATCT 1 cut(s) 825
BisI GCNGC 2 cut(s) 471, 759
BlsI GCNGC 2 cut(s) 472, 760
Bme1390I CCNGG 6 cut(s) 363, 658, 702, 904, 952, 972
BmeT110I CYCGRG 1 cut(s) 662
BmiI GGNNCC 2 cut(s) 360, 706
BmrFI CCNGG 6 cut(s) 363, 658, 702, 904, 952, 972
BmsI GCATC 3 cut(s) 220, 241, 1057
BpiI GAAGAC 1 cut(s) 878
BpmI CTGGAG 2 cut(s) 840, 873
Bpu14I TTCGAA 2 cut(s) 281, 528
BpuMI CCSGG 3 cut(s) 658, 904, 952
Bsa29I ATCGAT 1 cut(s) 1065
BsaAI YACGTR 1 cut(s) 729
BsaHI GRCGYC 1 cut(s) 833
BsaJI CCNNGG 1 cut(s) 903
BsaWI WCCGGW 2 cut(s) 343, 1180
BsaXI ACNNNNNCTCC 4 cut(s) 34, 64, 1167, 1197
Bsc4I CCNNNNNNNGG 1 cut(s) 224
Bse118I RCCGGY 1 cut(s) 921
Bse1I ACTGG 3 cut(s) 114, 823, 1320
Bse3DI GCAATG 3 cut(s) 170, 490, 952
BseAI TCCGGA 1 cut(s) 343
BseBI CCWGG 3 cut(s) 363, 702, 972
BseCI ATCGAT 1 cut(s) 1065
BseDI CCNNGG 1 cut(s) 903
BseGI GGATG 6 cut(s) 211, 340, 352, 552, 583, 1111
BseLI CCNNNNNNNGG 1 cut(s) 224
BseMI GCAATG 3 cut(s) 170, 490, 952
BseMII CTCAG 1 cut(s) 291
BseNI ACTGG 3 cut(s) 114, 823, 1320
BseRI GAGGAG 5 cut(s) 207, 759, 951, 1221, 1274
BseXI GCAGC 2 cut(s) 457, 770
BseYI CCCAGC 2 cut(s) 80, 1133
Bsh1236I CGCG 1 cut(s) 864
BshFI GGCC 2 cut(s) 455, 744
BshVI ATCGAT 1 cut(s) 1065
BsiHKCI CYCGRG 1 cut(s) 662
BsiSI CCGG 7 cut(s) 344, 456, 658, 903, 922, 951, 1181
BslFI GGGAC 4 cut(s) 688, 1093, 1123, 1150
BslI CCNNNNNNNGG 1 cut(s) 224
BsmAI GTCTC 3 cut(s) 849, 893, 1017
BsmBI CGTCTC 2 cut(s) 849, 1017
BsmFI GGGAC 4 cut(s) 688, 1093, 1123, 1150
BsnI GGCC 2 cut(s) 455, 744
BsoBI CYCGRG 1 cut(s) 662
Bsp119I TTCGAA 2 cut(s) 281, 528
Bsp13I TCCGGA 1 cut(s) 343
Bsp143I GATC 7 cut(s) 227, 358, 508, 825, 965, 976, 1210
BspACI CCGC 3 cut(s) 623, 735, 963
BspANI GGCC 2 cut(s) 455, 744
BspCNI CTCAG 1 cut(s) 292
BspDI ATCGAT 1 cut(s) 1065
BspEI TCCGGA 1 cut(s) 343
BspFNI CGCG 1 cut(s) 864
BspHI TCATGA 1 cut(s) 792
BspLI GGNNCC 2 cut(s) 360, 706
BspPI GGATC 4 cut(s) 235, 353, 366, 973
BspQI GCTCTTC 1 cut(s) 1272
BspT104I TTCGAA 2 cut(s) 281, 528
BsrDI GCAATG 3 cut(s) 170, 490, 952
BsrFI RCCGGY 1 cut(s) 921
BsrI ACTGG 3 cut(s) 114, 823, 1320
BssAI RCCGGY 1 cut(s) 921
BssECI CCNNGG 1 cut(s) 903
BssMI GATC 7 cut(s) 227, 358, 508, 825, 965, 976, 1210
BssNI GRCGYC 1 cut(s) 833
Bst2UI CCWGG 3 cut(s) 363, 702, 972
Bst4CI ACNGT 3 cut(s) 241, 1102, 1114
Bst6I CTCTTC 3 cut(s) 366, 950, 1272
BstACI GRCGYC 1 cut(s) 833
BstBAI YACGTR 1 cut(s) 729
BstBI TTCGAA 2 cut(s) 281, 528
BstC8I GCNNGC 2 cut(s) 327, 1284
BstDEI CTNAG 2 cut(s) 300, 1242
BstENI CCTNNNNNAGG 1 cut(s) 222
BstF5I GGATG 6 cut(s) 211, 340, 352, 552, 583, 1111
BstFNI CGCG 1 cut(s) 864
BstH2I RGCGCY 2 cut(s) 315, 471
BstHHI GCGC 3 cut(s) 314, 368, 470
BstKTI GATC 7 cut(s) 230, 361, 511, 828, 968, 979, 1213
BstMAI GTCTC 3 cut(s) 849, 893, 1017
BstMBI GATC 7 cut(s) 227, 358, 508, 825, 965, 976, 1210
BstMWI GCNNNNNNNGC 3 cut(s) 68, 296, 741
BstNI CCWGG 3 cut(s) 363, 702, 972
BstNSI RCATGY 2 cut(s) 30, 681
BstSCI CCNGG 6 cut(s) 361, 656, 700, 902, 950, 970
BstUI CGCG 1 cut(s) 864
BstV1I GCAGC 2 cut(s) 457, 770
BstV2I GAAGAC 1 cut(s) 878
BstX2I RGATCY 3 cut(s) 227, 358, 825
BstYI RGATCY 3 cut(s) 227, 358, 825
Bsu15I ATCGAT 1 cut(s) 1065
BsuRI GGCC 2 cut(s) 455, 744
BsuTUI ATCGAT 1 cut(s) 1065
BtsCI GGATG 6 cut(s) 211, 340, 352, 552, 583, 1111
BtsIMutI CAGTG 4 cut(s) 237, 816, 1085, 1107
Cac8I GCNNGC 2 cut(s) 327, 1284
CciI TCATGA 1 cut(s) 792
CfoI GCGC 3 cut(s) 314, 368, 470
Cfr10I RCCGGY 1 cut(s) 921
ClaI ATCGAT 1 cut(s) 1065
CseI GACGC 3 cut(s) 841, 870, 1162
Csp6I GTAC 6 cut(s) 24, 269, 843, 896, 1094, 1226
CviAII CATG 5 cut(s) 27, 164, 187, 678, 793
CviQI GTAC 6 cut(s) 24, 269, 843, 896, 1094, 1226
DdeI CTNAG 2 cut(s) 300, 1242
DpnI GATC 7 cut(s) 229, 360, 510, 827, 967, 978, 1212
DpnII GATC 7 cut(s) 227, 358, 508, 825, 965, 976, 1210
DraIII CACNNNGTG 1 cut(s) 729
DrdI GACNNNNNNGTC 2 cut(s) 196, 802
DseDI GACNNNNNNGTC 2 cut(s) 196, 802
Eam1104I CTCTTC 3 cut(s) 366, 950, 1272
EarI CTCTTC 3 cut(s) 366, 950, 1272
EciI GGCGGA 2 cut(s) 750, 978
Eco32I GATATC 2 cut(s) 654, 1056
Eco47III AGCGCT 1 cut(s) 313
Eco72I CACGTG 1 cut(s) 729
Eco88I CYCGRG 1 cut(s) 662
EcoNI CCTNNNNNAGG 1 cut(s) 222
EcoRII CCWGG 3 cut(s) 361, 700, 970
EcoRV GATATC 2 cut(s) 654, 1056
EcoT22I ATGCAT 1 cut(s) 213
Esp3I CGTCTC 2 cut(s) 849, 1017
FaeI CATG 5 cut(s) 30, 167, 190, 681, 796
FaqI GGGAC 4 cut(s) 688, 1093, 1123, 1150
FatI CATG 5 cut(s) 26, 163, 186, 677, 792
FauNDI CATATG 1 cut(s) 400
Fnu4HI GCNGC 2 cut(s) 471, 759
FokI GGATG 6 cut(s) 198, 327, 359, 559, 590, 1118
Fsp4HI GCNGC 2 cut(s) 471, 759
FspBI CTAG 3 cut(s) 330, 762, 1146
GlaI GCGC 3 cut(s) 313, 367, 469
GluI GCNGC 2 cut(s) 471, 759
GsaI CCCAGC 2 cut(s) 84, 1137
GsuI CTGGAG 2 cut(s) 840, 873
HaeII RGCGCY 2 cut(s) 315, 471
HaeIII GGCC 2 cut(s) 455, 744
HapII CCGG 7 cut(s) 344, 456, 658, 903, 922, 951, 1181
HgaI GACGC 3 cut(s) 841, 870, 1162
HhaI GCGC 3 cut(s) 314, 368, 470
Hin1I GRCGYC 1 cut(s) 833
Hin1II CATG 5 cut(s) 30, 167, 190, 681, 796
Hin6I GCGC 3 cut(s) 312, 366, 468
HinP1I GCGC 3 cut(s) 312, 366, 468
HinfI GANTC 4 cut(s) 87, 92, 518, 911
HpaII CCGG 7 cut(s) 344, 456, 658, 903, 922, 951, 1181
HphI GGTGA 3 cut(s) 461, 960, 1231
Hpy166II GTNNAC 1 cut(s) 352
Hpy188I TCNGA 5 cut(s) 68, 275, 321, 415, 632
Hpy188III TCNNGA 8 cut(s) 201, 344, 561, 584, 664, 793, 829, 852
Hpy8I GTNNAC 1 cut(s) 352
Hpy99I CGWCG 2 cut(s) 835, 1156
HpyAV CCTTC 4 cut(s) 187, 524, 677, 935
HpyCH4III ACNGT 3 cut(s) 241, 1102, 1114
HpyCH4IV ACGT 1 cut(s) 728
HpyCH4V TGCA 7 cut(s) 62, 211, 254, 290, 695, 723, 1050
HpyF10VI GCNNNNNNNGC 3 cut(s) 68, 296, 741
HpyF3I CTNAG 2 cut(s) 300, 1242
HpySE526I ACGT 1 cut(s) 728
Hsp92I GRCGYC 1 cut(s) 833
Hsp92II CATG 5 cut(s) 30, 167, 190, 681, 796
HspAI GCGC 3 cut(s) 312, 366, 468
Kpn2I TCCGGA 1 cut(s) 343
Kzo9I GATC 7 cut(s) 227, 358, 508, 825, 965, 976, 1210
LguI GCTCTTC 1 cut(s) 1272
LmnI GCTCC 1 cut(s) 137
Lsp1109I GCAGC 2 cut(s) 457, 770
LweI GCATC 3 cut(s) 220, 241, 1057
MaeI CTAG 3 cut(s) 330, 762, 1146
MaeII ACGT 1 cut(s) 728
MaeIII GTNAC 1 cut(s) 392
MalI GATC 7 cut(s) 229, 360, 510, 827, 967, 978, 1212
MboI GATC 7 cut(s) 227, 358, 508, 825, 965, 976, 1210
MboII GAAGA 4 cut(s) 383, 883, 967, 1289
MflI RGATCY 3 cut(s) 227, 358, 825
MluCI AATT 5 cut(s) 56, 109, 127, 334, 377
MluI ACGCGT 1 cut(s) 862
MlyI GAGTC 1 cut(s) 512
MmeI TCCRAC 1 cut(s) 808
Mph1103I ATGCAT 1 cut(s) 213
MroI TCCGGA 1 cut(s) 343
MseI TTAA 3 cut(s) 306, 462, 608
MslI CAYNNNNRTG 1 cut(s) 345
MspA1I CMGCKG 1 cut(s) 1133
MspI CCGG 7 cut(s) 344, 456, 658, 903, 922, 951, 1181
MspR9I CCNGG 6 cut(s) 363, 658, 702, 904, 952, 972
MvaI CCWGG 3 cut(s) 363, 702, 972
MvnI CGCG 1 cut(s) 864
MwoI GCNNNNNNNGC 3 cut(s) 68, 296, 741
NciI CCSGG 3 cut(s) 658, 904, 952
NdeI CATATG 1 cut(s) 400
NdeII GATC 7 cut(s) 227, 358, 508, 825, 965, 976, 1210
NlaIII CATG 5 cut(s) 30, 167, 190, 681, 796
NlaIV GGNNCC 2 cut(s) 360, 706
NsiI ATGCAT 1 cut(s) 213
NspI RCATGY 2 cut(s) 30, 681
NspV TTCGAA 2 cut(s) 281, 528
PaeR7I CTCGAG 1 cut(s) 662
PagI TCATGA 1 cut(s) 792
PciI ACATGT 2 cut(s) 26, 677
PciSI GCTCTTC 1 cut(s) 1272
PcsI WCGNNNNNNNCGW 1 cut(s) 513
PfeI GAWTC 3 cut(s) 87, 92, 911
PkrI GCNGC 2 cut(s) 472, 760
PleI GAGTC 1 cut(s) 512
PmaCI CACGTG 1 cut(s) 729
PmlI CACGTG 1 cut(s) 729
PpsI GAGTC 1 cut(s) 512
Ppu21I YACGTR 1 cut(s) 729
PscI ACATGT 2 cut(s) 26, 677
Psp6I CCWGG 3 cut(s) 361, 700, 970
PspCI CACGTG 1 cut(s) 729
PspFI CCCAGC 2 cut(s) 80, 1133
PspGI CCWGG 3 cut(s) 361, 700, 970
PspN4I GGNNCC 2 cut(s) 360, 706
PsuI RGATCY 3 cut(s) 227, 358, 825
PvuII CAGCTG 1 cut(s) 1133
RsaI GTAC 6 cut(s) 25, 270, 844, 897, 1095, 1227
RsaNI GTAC 6 cut(s) 24, 269, 843, 896, 1094, 1226
RseI CAYNNNNRTG 1 cut(s) 345
SapI GCTCTTC 1 cut(s) 1272
SaqAI TTAA 3 cut(s) 306, 462, 608
SatI GCNGC 2 cut(s) 471, 759
Sau3AI GATC 7 cut(s) 227, 358, 508, 825, 965, 976, 1210
SchI GAGTC 1 cut(s) 512
ScrFI CCNGG 6 cut(s) 363, 658, 702, 904, 952, 972
SfaNI GCATC 3 cut(s) 220, 241, 1057
Sfr274I CTCGAG 1 cut(s) 662
SfuI TTCGAA 2 cut(s) 281, 528
SlaI CTCGAG 1 cut(s) 662
SmiMI CAYNNNNRTG 1 cut(s) 345
SmlI CTYRAG 1 cut(s) 662
SmoI CTYRAG 1 cut(s) 662
Sse9I AATT 5 cut(s) 56, 109, 127, 334, 377
SsiI CCGC 3 cut(s) 623, 735, 963
SspI AATATT 1 cut(s) 1036
SspMI CTAG 3 cut(s) 330, 762, 1146
StyD4I CCNGG 6 cut(s) 361, 656, 700, 902, 950, 970
TaaI ACNGT 3 cut(s) 241, 1102, 1114
TaiI ACGT 1 cut(s) 731
TaqI TCGA 9 cut(s) 90, 149, 281, 507, 516, 528, 663, 830, 1065
TasI AATT 5 cut(s) 56, 109, 127, 334, 377
TatI WGTACW 2 cut(s) 23, 1225
TfiI GAWTC 3 cut(s) 87, 92, 911
Tru1I TTAA 3 cut(s) 306, 462, 608
Tru9I TTAA 3 cut(s) 306, 462, 608
TscAI CASTG 4 cut(s) 244, 823, 1092, 1107
TseI GCWGC 2 cut(s) 470, 758
TspDTI ATGAA 1 cut(s) 435
TspGWI ACGGA 3 cut(s) 492, 873, 895
TspRI CASTG 4 cut(s) 244, 823, 1092, 1107
XagI CCTNNNNNAGG 1 cut(s) 222
XapI RAATTY 2 cut(s) 109, 377
XceI RCATGY 2 cut(s) 30, 681
XhoI CTCGAG 1 cut(s) 662
XspI CTAG 3 cut(s) 330, 762, 1146
Zsp2I ATGCAT 1 cut(s) 213
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.