FvH4_6g30510

Chaperone protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
23631143 .. 23637419
6277 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g30510.t2

Sequence Viewer

Length: 1320 bp
ATGGCAATTATACCTTGTGGAAGTACATCGGTTGCTCAATGGGGCATTCGTCCTCAGCCTATGCTAAGATCCTATGCCATGAACAAGATACGCACATCCCAGTGTTGTGTTTCAAGCCAAATTGGCTCTTTGGGGGCACCAACATCAAGCGTCTCTCGGGATTCCTTGAATGCTCTATTCTGTGCAGGCCCATCTCACACTTCACATCGCAGTAGGGGAGCAAGATTCATAGTTAGAGCAGAGTCTGACTACTATTCTGTTCTTGGAGTGTCAAGAAATGCGACTAAAGCAGAAATTAAGAGCGCATACCGGAAGCTTGCAAGAAGTTATCATCCAGATGTGAACAAAGAAGCAGGGGCAGAAACAAAATTCAAGGAAATTAGTAATGCATATGAGGTCTTGTCTGATGATGAAAAACGATCCTTGTATGACAAATATGGAGAGGCTGGAGTTAAAGGTGCTGGTATGGGTCCAGGGGATTTCAGCAATCCATTTGACCTGTTTGAGTCACTGTTTGAGGGCATGGGGGGAATGGGATCCAGAGGTGGTGGTGGTTCTAGGAATAGAGCGGTTGATGGCCAGGACGAGTATTATAGTCTCGTCTTGAACTTCAAAGAAGCAGTTTTTGGGGTTGAAAAGGAAATTGAAATAAGTCGGTTGGAGAGCTGTGGAACTTGCAATGGTTCAGGGGCTAAAGCAGGAACCAAGCCATCCAGATGCAGCACATGTGGTGGGCAAGGTCAGGTTGTTCAATCAGCAAGGACTCCTTTGGGTGTCTTCCAGCAAGTAATGACATGCTCTTCCTGTGCCGGAACTGGGGAAATATCCACCCCTTGTAATACTTGCTCAGGTGATGGTCGTGTGAGGAAGACAAAGCGAATCAGTCTGAAAGTTCCAGCTGGTGTGGATGTAGGCAGCCGTTTAAGAGTTCGAAATGAAGGCAATGCTGGAAAACGAGGCGGGTCTCCGGGTGACTTATTTGTTATTATAGAAGTTATCCCAGACCCTGTCCTCAAACGTGATGATACCAACATTATGTACTCCTGCAAGGTGTCCTATATTGATGCAATTTTGGGGACTACAATTAAGGTTCCAACAGTTGATGGCATGGTTGATTTGAAGATTCCAGCAGGGACTCAACCAAACACGACCCTCGTGATGGCAAAGAAAGGTGTTCCCCTCTTAAACAAAAGCAACATGAGAGGTGATCAGCTGGTCAGAGTGCAGGTTGAAATCCCAAAGAGATTAAGCAATGATGAAAAGAAGCTCATTGAAGAACTCGCGGATCTGAGCAAGGGAAAGGCTGCAAGCAGGAGATAG

Protein Analysis

440

Amino Acids

46.97

Weight (kDa)

9.26

Isoelectric Point (pI)

38.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 83 - 144 1.7e-27 DnaJ domain
DnaJ_C PF01556 198 - 413 8.2e-45 DnaJ C terminal domain
DnaJ_CXXCXGXG PF00684 223 - 286 1.1e-14 DnaJ central domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1216
AccB1I GGYRCC 1 cut(s) 136
AccBSI CCGCTC 1 cut(s) 569
AccII CGCG 1 cut(s) 1283
AciI CCGC 3 cut(s) 569, 960, 1283
AclWI GGATC 5 cut(s) 63, 414, 531, 544, 1293
AcoI YGGCCR 1 cut(s) 577
AcsI RAATTY 1 cut(s) 368
AfaI GTAC 2 cut(s) 25, 1040
AfiI CCNNNNNNNGG 2 cut(s) 816, 1159
AflIII ACRYGT 1 cut(s) 725
AjnI CCWGG 2 cut(s) 472, 579
AjuI GAANNNNNNNTTGG 2 cut(s) 609, 641
AluBI AGCT 5 cut(s) 316, 666, 899, 1213, 1267
AluI AGCT 5 cut(s) 316, 666, 899, 1213, 1267
Alw26I GTCTC 3 cut(s) 157, 602, 969
AlwI GGATC 5 cut(s) 63, 414, 531, 544, 1293
AlwNI CAGNNNCTG 2 cut(s) 245, 1007
Ama87I CYCGRG 1 cut(s) 156
AoxI GGCC 2 cut(s) 187, 577
ApeKI GCWGC 3 cut(s) 720, 915, 1304
ApoI RAATTY 1 cut(s) 368
AspLEI GCGC 1 cut(s) 305
AspS9I GGNCC 2 cut(s) 188, 470
AsuC2I CCSGG 1 cut(s) 969
AsuHPI GGTGA 3 cut(s) 863, 983, 1217
AsuII TTCGAA 1 cut(s) 931
AvaI CYCGRG 1 cut(s) 156
AvaII GGWCC 1 cut(s) 470
BaeGI GKGCMC 1 cut(s) 139
BalI TGGCCA 1 cut(s) 579
BamHI GGATCC 1 cut(s) 536
BanI GGYRCC 1 cut(s) 136
BauI CACGAG 1 cut(s) 1154
BbsI GAAGAC 2 cut(s) 769, 875
BbvCI CCTCAGC 1 cut(s) 54
BbvI GCAGC 3 cut(s) 732, 927, 1291
BccI CCATC 6 cut(s) 199, 569, 718, 848, 1097, 1153
BceAI ACGGC 1 cut(s) 903
BciT130I CCWGG 2 cut(s) 474, 581
BclI TGATCA 1 cut(s) 1207
BcnI CCSGG 1 cut(s) 969
BcoDI GTCTC 3 cut(s) 157, 602, 969
BfaI CTAG 1 cut(s) 558
BfuAI ACCTGC 1 cut(s) 1216
BglI GCCNNNNNGGC 1 cut(s) 123
BisI GCNGC 3 cut(s) 721, 916, 1305
BlsI GCNGC 3 cut(s) 722, 917, 1306
Bme1390I CCNGG 3 cut(s) 474, 581, 969
Bme18I GGWCC 1 cut(s) 470
BmeT110I CYCGRG 1 cut(s) 156
BmgT120I GGNCC 2 cut(s) 188, 470
BmiI GGNNCC 5 cut(s) 138, 471, 538, 703, 1092
BmrFI CCNGG 3 cut(s) 474, 581, 969
BmrI ACTGGG 2 cut(s) 94, 825
BmsI GCATC 2 cut(s) 707, 1054
BmuI ACTGGG 2 cut(s) 94, 825
BpiI GAAGAC 2 cut(s) 769, 875
BpmI CTGGAG 1 cut(s) 468
Bpu10I CCTNAGC 2 cut(s) 54, 847
Bpu14I TTCGAA 1 cut(s) 931
BpuMI CCSGG 1 cut(s) 969
BsaI GGTCTC 1 cut(s) 969
BsaJI CCNNGG 1 cut(s) 473
BsaWI WCCGGW 1 cut(s) 309
Bsc4I CCNNNNNNNGG 2 cut(s) 816, 1159
Bse1I ACTGG 2 cut(s) 100, 820
Bse3DI GCAATG 3 cut(s) 685, 949, 1258
BseBI CCWGG 2 cut(s) 474, 581
BseDI CCNNGG 1 cut(s) 473
BseGI GGATG 4 cut(s) 95, 331, 710, 913
BseLI CCNNNNNNNGG 2 cut(s) 816, 1159
BseMI GCAATG 3 cut(s) 685, 949, 1258
BseMII CTCAG 3 cut(s) 68, 861, 1280
BseNI ACTGG 2 cut(s) 100, 820
BseSI GKGCMC 1 cut(s) 139
BseXI GCAGC 3 cut(s) 732, 927, 1291
BsgI GTGCAG 2 cut(s) 204, 1244
Bsh1236I CGCG 1 cut(s) 1283
BshFI GGCC 2 cut(s) 189, 579
BshNI GGYRCC 1 cut(s) 136
BsiHKCI CYCGRG 1 cut(s) 156
BsiSI CCGG 3 cut(s) 310, 810, 968
BslFI GGGAC 2 cut(s) 1090, 1147
BslI CCNNNNNNNGG 2 cut(s) 816, 1159
BsmAI GTCTC 3 cut(s) 157, 602, 969
BsmBI CGTCTC 1 cut(s) 157
BsmFI GGGAC 2 cut(s) 1090, 1147
BsmI GAATGC 2 cut(s) 45, 175
BsnI GGCC 2 cut(s) 189, 579
Bso31I GGTCTC 1 cut(s) 969
BsoBI CYCGRG 1 cut(s) 156
Bsp119I TTCGAA 1 cut(s) 931
Bsp1286I GDGCHC 1 cut(s) 139
Bsp143I GATC 5 cut(s) 68, 419, 536, 1207, 1285
BspACI CCGC 3 cut(s) 569, 960, 1283
BspANI GGCC 2 cut(s) 189, 579
BspCNI CTCAG 3 cut(s) 67, 860, 1281
BspFNI CGCG 1 cut(s) 1283
BspLI GGNNCC 5 cut(s) 138, 471, 538, 703, 1092
BspMI ACCTGC 1 cut(s) 1216
BspPI GGATC 5 cut(s) 63, 414, 531, 544, 1293
BspQI GCTCTTC 1 cut(s) 805
BspT104I TTCGAA 1 cut(s) 931
BspT107I GGYRCC 1 cut(s) 136
BspTNI GGTCTC 1 cut(s) 969
BsrBI CCGCTC 1 cut(s) 569
BsrDI GCAATG 3 cut(s) 685, 949, 1258
BsrI ACTGG 2 cut(s) 100, 820
BssECI CCNNGG 1 cut(s) 473
BssMI GATC 5 cut(s) 68, 419, 536, 1207, 1285
BssSI CACGAG 1 cut(s) 1154
Bst2BI CACGAG 1 cut(s) 1154
Bst2UI CCWGG 2 cut(s) 474, 581
Bst4CI ACNGT 2 cut(s) 513, 1099
Bst6I CTCTTC 1 cut(s) 805
BstBI TTCGAA 1 cut(s) 931
BstC8I GCNNGC 3 cut(s) 187, 318, 1309
BstDEI CTNAG 4 cut(s) 54, 65, 847, 1289
BstF5I GGATG 4 cut(s) 95, 331, 710, 913
BstFNI CGCG 1 cut(s) 1283
BstHHI GCGC 1 cut(s) 305
BstKTI GATC 5 cut(s) 71, 422, 539, 1210, 1288
BstMAI GTCTC 3 cut(s) 157, 602, 969
BstMBI GATC 5 cut(s) 68, 419, 536, 1207, 1285
BstMWI GCNNNNNNNGC 2 cut(s) 123, 287
BstNI CCWGG 2 cut(s) 474, 581
BstNSI RCATGY 2 cut(s) 729, 798
BstSCI CCNGG 3 cut(s) 472, 579, 967
BstSLI GKGCMC 1 cut(s) 139
BstUI CGCG 1 cut(s) 1283
BstV1I GCAGC 3 cut(s) 732, 927, 1291
BstV2I GAAGAC 2 cut(s) 769, 875
BstX2I RGATCY 3 cut(s) 68, 536, 1285
BstYI RGATCY 3 cut(s) 68, 536, 1285
BsuRI GGCC 2 cut(s) 189, 579
BtgZI GCGATG 1 cut(s) 191
BtsCI GGATG 4 cut(s) 95, 331, 710, 913
BtsIMutI CAGTG 2 cut(s) 107, 509
BveI ACCTGC 1 cut(s) 1216
Cac8I GCNNGC 3 cut(s) 187, 318, 1309
CaiI CAGNNNCTG 2 cut(s) 245, 1007
CfoI GCGC 1 cut(s) 305
Cfr13I GGNCC 2 cut(s) 188, 470
CseI GACGC 1 cut(s) 139
Csp6I GTAC 2 cut(s) 24, 1039
CviAII CATG 6 cut(s) 79, 523, 726, 795, 1108, 1198
CviQI GTAC 2 cut(s) 24, 1039
DdeI CTNAG 4 cut(s) 54, 65, 847, 1289
DpnI GATC 5 cut(s) 70, 421, 538, 1209, 1287
DpnII GATC 5 cut(s) 68, 419, 536, 1207, 1285
EaeI YGGCCR 1 cut(s) 577
Eam1104I CTCTTC 1 cut(s) 805
EarI CTCTTC 1 cut(s) 805
Eco31I GGTCTC 1 cut(s) 969
Eco47I GGWCC 1 cut(s) 470
Eco88I CYCGRG 1 cut(s) 156
EcoRII CCWGG 2 cut(s) 472, 579
EcoT22I ATGCAT 1 cut(s) 391
Esp3I CGTCTC 1 cut(s) 157
FaeI CATG 6 cut(s) 82, 526, 729, 798, 1111, 1201
FalI AAGNNNNNCTT 2 cut(s) 751, 783
FaqI GGGAC 2 cut(s) 1090, 1147
FatI CATG 6 cut(s) 78, 522, 725, 794, 1107, 1197
FauI CCCGC 1 cut(s) 953
FauNDI CATATG 1 cut(s) 391
FbaI TGATCA 1 cut(s) 1207
Fnu4HI GCNGC 3 cut(s) 721, 916, 1305
FokI GGATG 4 cut(s) 82, 318, 697, 920
Fsp4HI GCNGC 3 cut(s) 721, 916, 1305
FspBI CTAG 1 cut(s) 558
GlaI GCGC 1 cut(s) 304
GluI GCNGC 3 cut(s) 721, 916, 1305
GsuI CTGGAG 1 cut(s) 468
HaeIII GGCC 2 cut(s) 189, 579
HapII CCGG 3 cut(s) 310, 810, 968
HgaI GACGC 1 cut(s) 139
HhaI GCGC 1 cut(s) 305
Hin1II CATG 6 cut(s) 82, 526, 729, 798, 1111, 1201
Hin6I GCGC 1 cut(s) 303
HinP1I GCGC 1 cut(s) 303
HindIII AAGCTT 1 cut(s) 314
HinfI GANTC 8 cut(s) 161, 225, 242, 506, 763, 879, 1123, 1135
HpaII CCGG 3 cut(s) 310, 810, 968
HphI GGTGA 3 cut(s) 863, 983, 1217
Hpy166II GTNNAC 1 cut(s) 343
Hpy188I TCNGA 5 cut(s) 247, 406, 888, 1220, 1290
Hpy188III TCNNGA 7 cut(s) 158, 273, 335, 540, 604, 714, 1156
Hpy8I GTNNAC 1 cut(s) 343
HpyAV CCTTC 1 cut(s) 932
HpyCH4III ACNGT 2 cut(s) 513, 1099
HpyCH4IV ACGT 1 cut(s) 1018
HpyCH4V TGCA 9 cut(s) 185, 320, 389, 678, 720, 1047, 1067, 1225, 1307
HpyF10VI GCNNNNNNNGC 2 cut(s) 123, 287
HpyF3I CTNAG 4 cut(s) 54, 65, 847, 1289
HpySE526I ACGT 1 cut(s) 1018
Hsp92II CATG 6 cut(s) 82, 526, 729, 798, 1111, 1201
HspAI GCGC 1 cut(s) 303
Ksp22I TGATCA 1 cut(s) 1207
Kzo9I GATC 5 cut(s) 68, 419, 536, 1207, 1285
LguI GCTCTTC 1 cut(s) 805
LmnI GCTCC 1 cut(s) 218
Lsp1109I GCAGC 3 cut(s) 732, 927, 1291
LweI GCATC 2 cut(s) 707, 1054
MaeI CTAG 1 cut(s) 558
MaeII ACGT 1 cut(s) 1018
MaeIII GTNAC 2 cut(s) 507, 971
MalI GATC 5 cut(s) 70, 421, 538, 1209, 1287
MbiI CCGCTC 1 cut(s) 569
MboI GATC 5 cut(s) 68, 419, 536, 1207, 1285
MboII GAAGA 5 cut(s) 769, 792, 880, 1132, 1286
MflI RGATCY 3 cut(s) 68, 536, 1285
MhlI GDGCHC 1 cut(s) 139
MlsI TGGCCA 1 cut(s) 579
MluCI AATT 8 cut(s) 6, 120, 294, 368, 378, 642, 1068, 1083
MluNI TGGCCA 1 cut(s) 579
MlyI GAGTC 4 cut(s) 251, 515, 757, 1129
MmeI TCCRAC 2 cut(s) 639, 1118
Mox20I TGGCCA 1 cut(s) 579
Mph1103I ATGCAT 1 cut(s) 391
MscI TGGCCA 1 cut(s) 579
MseI TTAA 6 cut(s) 297, 453, 923, 1086, 1184, 1247
MslI CAYNNNNRTG 3 cut(s) 100, 336, 715
Msp20I TGGCCA 1 cut(s) 579
MspA1I CMGCKG 2 cut(s) 899, 1213
MspI CCGG 3 cut(s) 310, 810, 968
MspR9I CCNGG 3 cut(s) 474, 581, 969
Mva1269I GAATGC 2 cut(s) 45, 175
MvaI CCWGG 2 cut(s) 474, 581
MvnI CGCG 1 cut(s) 1283
MwoI GCNNNNNNNGC 2 cut(s) 123, 287
NciI CCSGG 1 cut(s) 969
NdeI CATATG 1 cut(s) 391
NdeII GATC 5 cut(s) 68, 419, 536, 1207, 1285
NlaIII CATG 6 cut(s) 82, 526, 729, 798, 1111, 1201
NlaIV GGNNCC 5 cut(s) 138, 471, 538, 703, 1092
NmuCI GTSAC 2 cut(s) 507, 971
NsiI ATGCAT 1 cut(s) 391
NspI RCATGY 2 cut(s) 729, 798
NspV TTCGAA 1 cut(s) 931
PciI ACATGT 1 cut(s) 725
PciSI GCTCTTC 1 cut(s) 805
PctI GAATGC 2 cut(s) 45, 175
PfeI GAWTC 4 cut(s) 161, 225, 879, 1123
PflFI GACNNNGTC 1 cut(s) 1007
PkrI GCNGC 3 cut(s) 722, 917, 1306
PleI GAGTC 4 cut(s) 250, 514, 757, 1129
PpsI GAGTC 4 cut(s) 250, 514, 757, 1129
PscI ACATGT 1 cut(s) 725
Psp6I CCWGG 2 cut(s) 472, 579
PspGI CCWGG 2 cut(s) 472, 579
PspN4I GGNNCC 5 cut(s) 138, 471, 538, 703, 1092
PspPI GGNCC 2 cut(s) 188, 470
PstNI CAGNNNCTG 2 cut(s) 245, 1007
PsuI RGATCY 3 cut(s) 68, 536, 1285
PsyI GACNNNGTC 1 cut(s) 1007
PvuII CAGCTG 2 cut(s) 899, 1213
RsaI GTAC 2 cut(s) 25, 1040
RsaNI GTAC 2 cut(s) 24, 1039
RseI CAYNNNNRTG 3 cut(s) 100, 336, 715
SapI GCTCTTC 1 cut(s) 805
SaqAI TTAA 6 cut(s) 297, 453, 923, 1086, 1184, 1247
SatI GCNGC 3 cut(s) 721, 916, 1305
Sau3AI GATC 5 cut(s) 68, 419, 536, 1207, 1285
Sau96I GGNCC 2 cut(s) 188, 470
SchI GAGTC 4 cut(s) 251, 515, 757, 1129
ScrFI CCNGG 3 cut(s) 474, 581, 969
SduI GDGCHC 1 cut(s) 139
SfaNI GCATC 2 cut(s) 707, 1054
SfuI TTCGAA 1 cut(s) 931
SinI GGWCC 1 cut(s) 470
SmiMI CAYNNNNRTG 3 cut(s) 100, 336, 715
Sse9I AATT 8 cut(s) 6, 120, 294, 368, 378, 642, 1068, 1083
SsiI CCGC 3 cut(s) 569, 960, 1283
SspMI CTAG 1 cut(s) 558
StyD4I CCNGG 3 cut(s) 472, 579, 967
TaaI ACNGT 2 cut(s) 513, 1099
TaiI ACGT 1 cut(s) 1021
TaqI TCGA 1 cut(s) 931
TasI AATT 8 cut(s) 6, 120, 294, 368, 378, 642, 1068, 1083
TatI WGTACW 2 cut(s) 23, 1038
TfiI GAWTC 4 cut(s) 161, 225, 879, 1123
Tru1I TTAA 6 cut(s) 297, 453, 923, 1086, 1184, 1247
Tru9I TTAA 6 cut(s) 297, 453, 923, 1086, 1184, 1247
TscAI CASTG 2 cut(s) 107, 516
TseFI GTSAC 2 cut(s) 507, 971
TseI GCWGC 3 cut(s) 720, 915, 1304
Tsp45I GTSAC 2 cut(s) 507, 971
TspDTI ATGAA 5 cut(s) 95, 217, 426, 951, 1272
TspRI CASTG 2 cut(s) 107, 516
Tth111I GACNNNGTC 1 cut(s) 1007
VpaK11BI GGWCC 1 cut(s) 470
XapI RAATTY 1 cut(s) 368
XceI RCATGY 2 cut(s) 729, 798
XspI CTAG 1 cut(s) 558
Zsp2I ATGCAT 1 cut(s) 391
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.